MD17G1065600.v1.1

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0011361
Physical Location & Seq
Reverse (-)
5307860 .. 5311910
4051 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1065600.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGAAATGGAAATTGATGATCTTCTGGGTCGCAACCGGCCGGTGAGTATTCCGACGAAGAGTGCGATTTACGTGTGGGGTTACAACCAGTCCGGGCAGACGGGTCGGAACGGGAAGGAGGGGCAGTTGAGGATTCCGAAACAGCTCTCGCCGGAGCTTTTTGGATGCACGGCTGGGGCTAATTCGCGGTGGCTGGACATTGCTTGCGGCCGCGAGCACACCGCCGCTGTTGCCTCCGATGGGTCGCTTTTCACTTGGGGAGCTAATGACTTCGGCCAATTGGGAGATGGAACGGAGGAGCGAAGAAAAAATCCGAAGAAAGTGAAGCAATTACAGACAGAGTTTGTGAAATCTGTGTCTTGTGGAGCACATTGTACCGCAGCTATTGCAGAACCTCGTGAAAATGATGGAACCGTCTCAACAAGAAGGCTTTGGGTGTGGGGGCAAAATCAGGGATCGAATTCTCCACGTTTGTTTTGGGGAGTCTTTACTCCAAACACGATTATCCGTCAAGTGTCTTGTGGGGCAGTTCATGTGATCGCTTTATCAGAGGATGGCATGCTACAAGCGTGGGGATATAATGAATATGGTCAGCTTGGCAGAGGATTTACATGTGACGGATTACAGGGGGCTCGTATAATAAATGCATATGCGAAGTTCCTAGATGAAGCCCCTGAGCTTGTGAAGATTACCCAAGTGTCATGCGGGGAGTACCACTCAGCAGCTATATCTGAAAAAGGCGAGGTGTATACTTGGGGGCTAGGAAACATGGGTCAACTTGGGCATTCTTCCCTTCAATCTGGGGAGAAAGAGTTATTGCCTAGGCGAGTGGTCGCACTTGATGGAATAGTCATAAAGGATGTTGCATGTGGTGGCGTACATACATGTGCTGTGACTCAGAAGGGAGCTCTTTATGCTTGGGGTGGTGGTCGAGCAGGGCAGTTAGGCCTTGGCCCTGAAACGGGATTATTTTCATGCAACCCTAATGAATCTCAGTCTTTTTTCCGTAACATTCCTGCATTGGTTGTTCCAACTAGTGTGCAACTCATTGCATGCGGACACTCCCACACACTTATCTCTACAAGGGATGGAAGAATCCATGGATGGGGCTACAATAGCTATGGTCAGGCATCTAACGAGAAATCAACTTATGCTTGGTATCCATCCCCGGTTGATTGGTGCGTTGGGGAAGTGCGAAAACTTGCAGCTGGTGGTGGCCATTCAGCCGTGTTGACTGATGCATGTTCCTTGAAGGAATTGTGTGAATTTAATCTTGCAGATAGTGTTAATCTAAAGAATGCTTCTACAATTGAAGACATTGCGTCTAGAACAGGTTCAGATGCTTTGGCACGGCTTTGTGAAAGATTAAGGCAGCATGTCCTCGAGGGTGGCGACTGTGAATTTGAAGACAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
RCC1

Protein Analysis

472

Amino Acids

50.87

Weight (kDa)

6.04

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 19 - 151 1.9e-26 RCC1-like domain
RCC1 PF00415 23 - 77 1.6e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 66 - 93 3.5e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 80 - 129 2.9e-15 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 144 - 410 9e-56 RCC1-like domain
RCC1_2 PF13540 169 - 198 4e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 185 - 243 2.9e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 230 - 259 8.1e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 246 - 298 1.5e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 285 - 314 8.8e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 301 - 358 1e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 348 - 376 1e-09 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011361)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02300 AT3G02300
fragaria_vesca FvH4_6g46400 FvH4_6g46400
malus_domestica MD09G1074200.v1.1 MD17G1065600.v1.1
prunus_persica Prupe.3G249200_v2.0.a1 Prupe.3G249200_v2.0.a1
pyrus_communis pycom09g00130 pycom17g06550
rosa_chinensis RchiOBHm_Chr2g0164931
rosa_laevigata RLG00000021498
rosa_multiflora Rmu_sc0001097.1_g000002
rosa_roxburghii Rroxscaffold_2G00086200
rosa_rugosa Rorug02G0511300
rosa_samantha Rh2AG579600 Rh2BG590600 Rh2CG561300 Rh2DG601000
rosa_wichuraiana Rw2G048110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1382
AccI GTMKAC 1 cut(s) 749
AccII CGCG 2 cut(s) 187, 213
AciI CCGC 8 cut(s) 187, 207, 211, 222, 225, 378, 705, 1056
AclWI GGATC 1 cut(s) 463
AcoI YGGCCR 4 cut(s) 38, 208, 274, 1216
AcsI RAATTY 3 cut(s) 460, 1265, 1400
AfaI GTAC 3 cut(s) 376, 713, 879
AfiI CCNNNNNNNGG 4 cut(s) 240, 961, 962, 1105
AflIII ACRYGT 3 cut(s) 72, 611, 884
AgsI TTSAA 4 cut(s) 797, 1252, 1313, 1406
AhdI GACNNNNNGTC 1 cut(s) 1321
AhlI ACTAGT 1 cut(s) 1034
Alw21I GWGCWC 3 cut(s) 219, 370, 910
Alw26I GTCTC 1 cut(s) 421
AlwI GGATC 1 cut(s) 463
Ama87I CYCGRG 1 cut(s) 1382
AoxI GGCC 6 cut(s) 38, 208, 274, 946, 952, 1216
ApeKI GCWGC 4 cut(s) 380, 722, 1205, 1372
ApoI RAATTY 3 cut(s) 460, 1265, 1400
ArsI GACNNNNNNTTYG 1 cut(s) 1385
Asp700I GAANNNNTTC 1 cut(s) 1333
AspA2I CCTAGG 1 cut(s) 821
AspS9I GGNCC 1 cut(s) 953
AsuC2I CCSGG 2 cut(s) 94, 1169
AsuHPI GGTGA 1 cut(s) 55
AvaI CYCGRG 1 cut(s) 1382
AvrII CCTAGG 1 cut(s) 821
BalI TGGCCA 1 cut(s) 1218
BanII GRGCYC 2 cut(s) 634, 910
BauI CACGAG 1 cut(s) 396
BbsI GAAGAC 1 cut(s) 1320
Bbv12I GWGCWC 3 cut(s) 219, 370, 910
BbvI GCAGC 4 cut(s) 392, 734, 1217, 1384
BccI CCATC 8 cut(s) 233, 281, 401, 548, 836, 1082, 1098, 1171
BceAI ACGGC 3 cut(s) 186, 1211, 1367
BcgI CGANNNNNNTGC 2 cut(s) 86, 120
BciVI GTATCC 1 cut(s) 1170
BcnI CCSGG 2 cut(s) 94, 1169
BcoDI GTCTC 1 cut(s) 421
BcuI ACTAGT 1 cut(s) 1034
BfaI CTAG 5 cut(s) 662, 761, 822, 1035, 1326
BfuI GTATCC 1 cut(s) 1170
BisI GCNGC 7 cut(s) 208, 211, 225, 381, 723, 1206, 1373
BlnI CCTAGG 1 cut(s) 821
BlsI GCNGC 7 cut(s) 209, 212, 226, 382, 724, 1207, 1374
Bme1390I CCNGG 2 cut(s) 94, 1169
BmeRI GACNNNNNGTC 1 cut(s) 1321
BmeT110I CYCGRG 1 cut(s) 1382
BmgT120I GGNCC 1 cut(s) 953
BmiI GGNNCC 1 cut(s) 412
BmrFI CCNGG 2 cut(s) 94, 1169
BmsI GCATC 4 cut(s) 155, 1139, 1228, 1330
BpiI GAAGAC 1 cut(s) 1320
BplI GAGNNNNNCTC 2 cut(s) 701, 733
Bpu10I CCTNAGC 1 cut(s) 675
BpuMI CCSGG 2 cut(s) 94, 1169
BsaAI YACGTR 1 cut(s) 73
BsaJI CCNNGG 4 cut(s) 821, 949, 1099, 1167
BsaXI ACNNNNNCTCC 4 cut(s) 110, 140, 797, 827
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 961, 962, 1105
Bse118I RCCGGY 2 cut(s) 36, 40
Bse1I ACTGG 1 cut(s) 88
Bse3DI GCAATG 3 cut(s) 198, 1047, 1317
BseDI CCNNGG 4 cut(s) 821, 949, 1099, 1167
BseGI GGATG 6 cut(s) 170, 559, 865, 1093, 1109, 1163
BseLI CCNNNNNNNGG 4 cut(s) 240, 961, 962, 1105
BseMI GCAATG 3 cut(s) 198, 1047, 1317
BseMII CTCAG 4 cut(s) 666, 732, 911, 1007
BseNI ACTGG 1 cut(s) 88
BseRI GAGGAG 1 cut(s) 311
BseX3I CGGCCG 2 cut(s) 38, 208
BseXI GCAGC 4 cut(s) 392, 734, 1217, 1384
BseYI CCCAGC 1 cut(s) 173
Bsh1236I CGCG 2 cut(s) 187, 213
Bsh1285I CGRYCG 2 cut(s) 41, 211
BshFI GGCC 6 cut(s) 40, 210, 276, 948, 954, 1218
BsiEI CGRYCG 2 cut(s) 41, 211
BsiHKAI GWGCWC 3 cut(s) 219, 370, 910
BsiHKCI CYCGRG 1 cut(s) 1382
BsiSI CCGG 5 cut(s) 37, 41, 93, 152, 1169
BslI CCNNNNNNNGG 4 cut(s) 240, 961, 962, 1105
BsmAI GTCTC 1 cut(s) 421
BsmBI CGTCTC 1 cut(s) 421
BsmI GAATGC 2 cut(s) 784, 1303
BsnI GGCC 6 cut(s) 40, 210, 276, 948, 954, 1218
BsoBI CYCGRG 1 cut(s) 1382
Bsp1286I GDGCHC 4 cut(s) 219, 370, 634, 910
Bsp143I GATC 3 cut(s) 19, 455, 537
Bsp19I CCATGG 1 cut(s) 1099
BspACI CCGC 8 cut(s) 187, 207, 211, 222, 225, 378, 705, 1056
BspANI GGCC 6 cut(s) 40, 210, 276, 948, 954, 1218
BspCNI CTCAG 4 cut(s) 667, 731, 910, 1006
BspFNI CGCG 2 cut(s) 187, 213
BspLI GGNNCC 1 cut(s) 412
BspPI GGATC 1 cut(s) 463
BsrDI GCAATG 3 cut(s) 198, 1047, 1317
BsrFI RCCGGY 2 cut(s) 36, 40
BsrI ACTGG 1 cut(s) 88
BssAI RCCGGY 2 cut(s) 36, 40
BssECI CCNNGG 4 cut(s) 821, 949, 1099, 1167
BssMI GATC 3 cut(s) 19, 455, 537
BssNAI GTATAC 1 cut(s) 750
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 3 cut(s) 821, 949, 1099
Bst1107I GTATAC 1 cut(s) 750
Bst2BI CACGAG 1 cut(s) 396
Bst4CI ACNGT 2 cut(s) 415, 1397
Bst6I CTCTTC 1 cut(s) 53
BstAPI GCANNNNNTGC 1 cut(s) 386
BstBAI YACGTR 1 cut(s) 73
BstC8I GCNNGC 4 cut(s) 205, 215, 560, 1054
BstDEI CTNAG 4 cut(s) 675, 718, 897, 993
BstDSI CCRYGG 1 cut(s) 1099
BstF5I GGATG 6 cut(s) 170, 559, 865, 1093, 1109, 1163
BstFNI CGCG 2 cut(s) 187, 213
BstKTI GATC 3 cut(s) 22, 458, 540
BstMAI GTCTC 1 cut(s) 421
BstMBI GATC 3 cut(s) 19, 455, 537
BstMCI CGRYCG 2 cut(s) 41, 211
BstMWI GCNNNNNNNGC 4 cut(s) 230, 386, 914, 1116
BstNSI RCATGY 7 cut(s) 562, 615, 870, 888, 1056, 1245, 1379
BstSCI CCNGG 2 cut(s) 92, 1167
BstUI CGCG 2 cut(s) 187, 213
BstV1I GCAGC 4 cut(s) 392, 734, 1217, 1384
BstV2I GAAGAC 1 cut(s) 1320
BstZ17I GTATAC 1 cut(s) 750
BstZI CGGCCG 2 cut(s) 38, 208
BsuI GTATCC 1 cut(s) 1170
BsuRI GGCC 6 cut(s) 40, 210, 276, 948, 954, 1218
BtgI CCRYGG 1 cut(s) 1099
BtsCI GGATG 6 cut(s) 170, 559, 865, 1093, 1109, 1163
Cac8I GCNNGC 4 cut(s) 205, 215, 560, 1054
CciNI GCGGCCGC 1 cut(s) 208
Cfr10I RCCGGY 2 cut(s) 36, 40
Cfr13I GGNCC 1 cut(s) 953
CseI GACGC 1 cut(s) 1311
Csp6I GTAC 3 cut(s) 375, 712, 878
CviQI GTAC 3 cut(s) 375, 712, 878
DdeI CTNAG 4 cut(s) 675, 718, 897, 993
DpnI GATC 3 cut(s) 21, 457, 539
DpnII GATC 3 cut(s) 19, 455, 537
DriI GACNNNNNGTC 1 cut(s) 1321
EaeI YGGCCR 4 cut(s) 38, 208, 274, 1216
EagI CGGCCG 2 cut(s) 38, 208
Eam1104I CTCTTC 1 cut(s) 53
Eam1105I GACNNNNNGTC 1 cut(s) 1321
EarI CTCTTC 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 908
EclXI CGGCCG 2 cut(s) 38, 208
Eco130I CCWWGG 3 cut(s) 821, 949, 1099
Eco147I AGGCCT 1 cut(s) 948
Eco24I GRGCYC 2 cut(s) 634, 910
Eco52I CGGCCG 2 cut(s) 38, 208
Eco53kI GAGCTC 1 cut(s) 908
Eco88I CYCGRG 1 cut(s) 1382
EcoICRI GAGCTC 1 cut(s) 908
EcoRI GAATTC 1 cut(s) 460
EcoT14I CCWWGG 3 cut(s) 821, 949, 1099
EcoT22I ATGCAT 2 cut(s) 649, 1243
EcoT38I GRGCYC 2 cut(s) 634, 910
ErhI CCWWGG 3 cut(s) 821, 949, 1099
Esp3I CGTCTC 1 cut(s) 421
FauI CCCGC 1 cut(s) 698
FauNDI CATATG 1 cut(s) 649
FblI GTMKAC 1 cut(s) 749
Fnu4HI GCNGC 7 cut(s) 208, 211, 225, 381, 723, 1206, 1373
FokI GGATG 6 cut(s) 177, 566, 872, 1100, 1116, 1150
FriOI GRGCYC 2 cut(s) 634, 910
Fsp4HI GCNGC 7 cut(s) 208, 211, 225, 381, 723, 1206, 1373
FspBI CTAG 5 cut(s) 662, 761, 822, 1035, 1326
GluI GCNGC 7 cut(s) 208, 211, 225, 381, 723, 1206, 1373
GsaI CCCAGC 1 cut(s) 177
HaeIII GGCC 6 cut(s) 40, 210, 276, 948, 954, 1218
HapII CCGG 5 cut(s) 37, 41, 93, 152, 1169
HgaI GACGC 1 cut(s) 1311
HincII GTYRAC 2 cut(s) 776, 1233
HindII GTYRAC 2 cut(s) 776, 1233
HinfI GANTC 5 cut(s) 133, 483, 895, 989, 1095
HpaII CCGG 5 cut(s) 37, 41, 93, 152, 1169
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 3 cut(s) 750, 776, 1233
Hpy188I TCNGA 9 cut(s) 54, 108, 138, 238, 315, 550, 733, 900, 1339
Hpy188III TCNNGA 2 cut(s) 398, 1326
Hpy8I GTNNAC 3 cut(s) 750, 776, 1233
Hpy99I CGWCG 1 cut(s) 58
HpyAV CCTTC 5 cut(s) 109, 420, 803, 895, 1246
HpyCH4III ACNGT 2 cut(s) 415, 1397
HpyCH4IV ACGT 2 cut(s) 72, 469
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 386, 914, 1116
HpyF3I CTNAG 4 cut(s) 675, 718, 897, 993
HpySE526I ACGT 2 cut(s) 72, 469
Kzo9I GATC 3 cut(s) 19, 455, 537
LmnI GCTCC 5 cut(s) 154, 260, 298, 365, 905
Lsp1109I GCAGC 4 cut(s) 392, 734, 1217, 1384
LweI GCATC 4 cut(s) 155, 1139, 1228, 1330
MaeI CTAG 5 cut(s) 662, 761, 822, 1035, 1326
MaeII ACGT 2 cut(s) 72, 469
MaeIII GTNAC 4 cut(s) 80, 614, 892, 1007
MalI GATC 3 cut(s) 21, 457, 539
MboI GATC 3 cut(s) 19, 455, 537
MboII GAAGA 8 cut(s) 14, 70, 315, 328, 697, 780, 1104, 1325
MfeI CAATTG 2 cut(s) 278, 1308
MhlI GDGCHC 4 cut(s) 219, 370, 634, 910
MlsI TGGCCA 1 cut(s) 1218
MluNI TGGCCA 1 cut(s) 1218
MlyI GAGTC 2 cut(s) 492, 889
MmeI TCCRAC 3 cut(s) 77, 86, 1055
Mox20I TGGCCA 1 cut(s) 1218
Mph1103I ATGCAT 2 cut(s) 649, 1243
MroXI GAANNNNTTC 1 cut(s) 1333
MscI TGGCCA 1 cut(s) 1218
MseI TTAA 3 cut(s) 1269, 1287, 1367
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 1 cut(s) 1218
MspA1I CMGCKG 2 cut(s) 227, 1208
MspI CCGG 5 cut(s) 37, 41, 93, 152, 1169
MspR9I CCNGG 2 cut(s) 94, 1169
MunI CAATTG 2 cut(s) 278, 1308
Mva1269I GAATGC 2 cut(s) 784, 1303
MvnI CGCG 2 cut(s) 187, 213
MwoI GCNNNNNNNGC 4 cut(s) 230, 386, 914, 1116
NciI CCSGG 2 cut(s) 94, 1169
NcoI CCATGG 1 cut(s) 1099
NdeI CATATG 1 cut(s) 649
NdeII GATC 3 cut(s) 19, 455, 537
NlaIV GGNNCC 1 cut(s) 412
NmuCI GTSAC 2 cut(s) 614, 892
NotI GCGGCCGC 1 cut(s) 208
NsiI ATGCAT 2 cut(s) 649, 1243
NspI RCATGY 7 cut(s) 562, 615, 870, 888, 1056, 1245, 1379
PaeI GCATGC 2 cut(s) 562, 1056
PaeR7I CTCGAG 1 cut(s) 1382
PceI AGGCCT 1 cut(s) 948
PciI ACATGT 2 cut(s) 611, 884
PcsI WCGNNNNNNNCGW 2 cut(s) 62, 1389
PctI GAATGC 2 cut(s) 784, 1303
PdmI GAANNNNTTC 1 cut(s) 1333
PfeI GAWTC 3 cut(s) 133, 989, 1095
PkrI GCNGC 7 cut(s) 209, 212, 226, 382, 724, 1207, 1374
PleI GAGTC 2 cut(s) 491, 889
PpsI GAGTC 2 cut(s) 491, 889
Ppu21I YACGTR 1 cut(s) 73
PscI ACATGT 2 cut(s) 611, 884
Psp124BI GAGCTC 1 cut(s) 910
PspFI CCCAGC 1 cut(s) 173
PspN4I GGNNCC 1 cut(s) 412
PspPI GGNCC 1 cut(s) 953
PspXI VCTCGAGB 1 cut(s) 1382
PvuII CAGCTG 1 cut(s) 1208
RsaI GTAC 3 cut(s) 376, 713, 879
RsaNI GTAC 3 cut(s) 375, 712, 878
RseI CAYNNNNRTG 1 cut(s) 885
SacI GAGCTC 1 cut(s) 910
SaqAI TTAA 3 cut(s) 1269, 1287, 1367
SatI GCNGC 7 cut(s) 208, 211, 225, 381, 723, 1206, 1373
Sau3AI GATC 3 cut(s) 19, 455, 537
Sau96I GGNCC 1 cut(s) 953
SchI GAGTC 2 cut(s) 492, 889
ScrFI CCNGG 2 cut(s) 94, 1169
SduI GDGCHC 4 cut(s) 219, 370, 634, 910
SfaNI GCATC 4 cut(s) 155, 1139, 1228, 1330
Sfr274I CTCGAG 1 cut(s) 1382
SlaI CTCGAG 1 cut(s) 1382
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 1 cut(s) 1382
SmoI CTYRAG 1 cut(s) 1382
SpeI ACTAGT 1 cut(s) 1034
SphI GCATGC 2 cut(s) 562, 1056
SseBI AGGCCT 1 cut(s) 948
SsiI CCGC 8 cut(s) 187, 207, 211, 222, 225, 378, 705, 1056
SspMI CTAG 5 cut(s) 662, 761, 822, 1035, 1326
SstI GAGCTC 1 cut(s) 910
StuI AGGCCT 1 cut(s) 948
StyD4I CCNGG 2 cut(s) 92, 1167
StyI CCWWGG 3 cut(s) 821, 949, 1099
TaaI ACNGT 2 cut(s) 415, 1397
TaiI ACGT 2 cut(s) 75, 472
TaqI TCGA 3 cut(s) 458, 931, 1383
TauI GCSGC 3 cut(s) 210, 213, 227
TfiI GAWTC 3 cut(s) 133, 989, 1095
Tru1I TTAA 3 cut(s) 1269, 1287, 1367
Tru9I TTAA 3 cut(s) 1269, 1287, 1367
TseFI GTSAC 2 cut(s) 614, 892
TseI GCWGC 4 cut(s) 380, 722, 1205, 1372
Tsp45I GTSAC 2 cut(s) 614, 892
TspDTI ATGAA 5 cut(s) 521, 597, 681, 963, 1002
TspGWI ACGGA 4 cut(s) 308, 497, 633, 995
XapI RAATTY 3 cut(s) 460, 1265, 1400
XbaI TCTAGA 1 cut(s) 1325
XceI RCATGY 7 cut(s) 562, 615, 870, 888, 1056, 1245, 1379
XcmI CCANNNNNNNNNTGG 2 cut(s) 284, 474
XhoI CTCGAG 1 cut(s) 1382
XmaJI CCTAGG 1 cut(s) 821
XmiI GTMKAC 1 cut(s) 749
XmnI GAANNNNTTC 1 cut(s) 1333
XspI CTAG 5 cut(s) 662, 761, 822, 1035, 1326
Zsp2I ATGCAT 2 cut(s) 649, 1243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.