histone acetyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45470 FvH4_6g45470 FvH4_6g45470 FvH4_6g45470 |
| malus_domestica | MD09G1082700.v1.1 MD09G1082800.v1.1 MD17G1073200.v1.1 |
| prunus_persica | Prupe.3G240900_v2.0.a1 Prupe.3G240900_v2.0.a1 |
| pyrus_communis | pycom09g00920 pycom17g07410 |
| rosa_chinensis | RchiOBHm_Chr2g0163411 |
| rosa_laevigata | RLG00000021391 |
| rosa_multiflora | Rmu_ssc0000231.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00087360 |
| rosa_rugosa | Rorug02G0502300 Rorug02G0502400 |
| rosa_samantha | Rh2AG569400 Rh2BG581500 Rh2CG551300 Rh2DG591400 |
| rosa_wichuraiana | Rw2G047120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1596 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 574 |
| AccBSI | CCGCTC | 1 cut(s) | 3186 |
| AccI | GTMKAC | 1 cut(s) | 2475 |
| AccII | CGCG | 1 cut(s) | 1212 |
| AciI | CCGC | 6 cut(s) | 193, 278, 521, 1212, 2119, 3186 |
| AclWI | GGATC | 7 cut(s) | 486, 499, 725, 950, 1740, 2381, 3255 |
| AcoI | YGGCCR | 1 cut(s) | 416 |
| AcsI | RAATTY | 3 cut(s) | 1686, 1763, 2551 |
| AcuI | CTGAAG | 9 cut(s) | 225, 327, 468, 567, 627, 681, 1386, 1903, 3272 |
| AcvI | CACGTG | 1 cut(s) | 673 |
| AcyI | GRCGYC | 1 cut(s) | 1597 |
| AdeI | CACNNNGTG | 2 cut(s) | 224, 467 |
| AfaI | GTAC | 4 cut(s) | 1249, 1916, 1960, 3229 |
| AfeI | AGCGCT | 1 cut(s) | 2953 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 257, 574, 2034, 2054, 2212, 2396 |
| AflIII | ACRYGT | 3 cut(s) | 1466, 2635, 3056 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2269 |
| AjnI | CCWGG | 2 cut(s) | 61, 1657 |
| AleI | CACNNNNGTG | 1 cut(s) | 2562 |
| Alw21I | GWGCWC | 5 cut(s) | 229, 472, 604, 1509, 3140 |
| Alw26I | GTCTC | 4 cut(s) | 1208, 1290, 1475, 1922 |
| Alw44I | GTGCAC | 1 cut(s) | 3136 |
| AlwI | GGATC | 7 cut(s) | 486, 499, 725, 950, 1740, 2381, 3255 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 971 |
| Aor51HI | AGCGCT | 1 cut(s) | 2953 |
| AoxI | GGCC | 6 cut(s) | 194, 416, 576, 1922, 2377, 2781 |
| ApaLI | GTGCAC | 1 cut(s) | 3136 |
| ApeKI | GCWGC | 6 cut(s) | 325, 436, 625, 2116, 2150, 2237 |
| ApoI | RAATTY | 3 cut(s) | 1686, 1763, 2551 |
| AseI | ATTAAT | 1 cut(s) | 654 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1953 |
| AspLEI | GCGC | 4 cut(s) | 1212, 1599, 2589, 2954 |
| AspS9I | GGNCC | 7 cut(s) | 248, 577, 885, 1630, 2377, 2532, 2781 |
| AsuC2I | CCSGG | 1 cut(s) | 2780 |
| AsuHPI | GGTGA | 6 cut(s) | 90, 937, 1859, 2069, 2273, 2549 |
| AsuII | TTCGAA | 1 cut(s) | 2699 |
| AvaII | GGWCC | 4 cut(s) | 248, 885, 1630, 2532 |
| AxyI | CCTNAGG | 1 cut(s) | 198 |
| BaeGI | GKGCMC | 2 cut(s) | 2047, 3140 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 302, 335 |
| BamHI | GGATCC | 1 cut(s) | 491 |
| BanI | GGYRCC | 1 cut(s) | 1596 |
| BanII | GRGCYC | 1 cut(s) | 1509 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3104, 3136 |
| BbrPI | CACGTG | 1 cut(s) | 673 |
| Bbv12I | GWGCWC | 5 cut(s) | 229, 472, 604, 1509, 3140 |
| BbvCI | CCTCAGC | 1 cut(s) | 2989 |
| BbvI | GCAGC | 6 cut(s) | 337, 448, 637, 2103, 2162, 2249 |
| BccI | CCATC | 9 cut(s) | 239, 482, 576, 673, 1096, 2088, 2252, 2390, 2883 |
| BceAI | ACGGC | 2 cut(s) | 431, 2250 |
| BciT130I | CCWGG | 2 cut(s) | 63, 1659 |
| BclI | TGATCA | 2 cut(s) | 1087, 2881 |
| BcnI | CCSGG | 1 cut(s) | 2780 |
| BcoDI | GTCTC | 4 cut(s) | 1208, 1290, 1475, 1922 |
| BfaI | CTAG | 1 cut(s) | 834 |
| BfmI | CTRYAG | 4 cut(s) | 282, 323, 623, 3211 |
| BfoI | RGCGCY | 2 cut(s) | 1600, 2955 |
| BglII | AGATCT | 2 cut(s) | 1546, 1669 |
| BisI | GCNGC | 9 cut(s) | 194, 278, 326, 437, 626, 2117, 2120, 2151, 2238 |
| BlpI | GCTNAGC | 3 cut(s) | 1079, 1565, 2583 |
| BlsI | GCNGC | 9 cut(s) | 195, 279, 327, 438, 627, 2118, 2121, 2152, 2239 |
| BmcAI | AGTACT | 1 cut(s) | 1916 |
| Bme1390I | CCNGG | 3 cut(s) | 63, 1659, 2780 |
| Bme18I | GGWCC | 4 cut(s) | 248, 885, 1630, 2532 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2269 |
| BmgT120I | GGNCC | 7 cut(s) | 248, 577, 885, 1630, 2377, 2532, 2781 |
| BmiI | GGNNCC | 9 cut(s) | 36, 204, 250, 493, 579, 684, 886, 1598, 1656 |
| BmrFI | CCNGG | 3 cut(s) | 63, 1659, 2780 |
| BmrI | ACTGGG | 2 cut(s) | 246, 2202 |
| BmsI | GCATC | 6 cut(s) | 164, 2412, 2561, 2569, 2818, 2860 |
| BmuI | ACTGGG | 2 cut(s) | 246, 2202 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1838, 1870 |
| BpmI | CTGGAG | 6 cut(s) | 84, 192, 1641, 1965, 3086, 3174 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2989 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1079, 1565, 2583 |
| Bpu14I | TTCGAA | 1 cut(s) | 2699 |
| BpuEI | CTTGAG | 4 cut(s) | 1190, 1493, 2015, 2755 |
| BpuMI | CCSGG | 1 cut(s) | 2780 |
| BsaAI | YACGTR | 1 cut(s) | 673 |
| BsaHI | GRCGYC | 1 cut(s) | 1597 |
| BsaI | GGTCTC | 1 cut(s) | 1290 |
| BsaJI | CCNNGG | 6 cut(s) | 1373, 2226, 2373, 2406, 2679, 2998 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1803, 1833 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 257, 574, 2034, 2054, 2212, 2396 |
| Bse1I | ACTGG | 8 cut(s) | 252, 419, 495, 1175, 1239, 1948, 2208, 3157 |
| Bse21I | CCTNAGG | 1 cut(s) | 198 |
| Bse3DI | GCAATG | 1 cut(s) | 2129 |
| BseBI | CCWGG | 2 cut(s) | 63, 1659 |
| BseDI | CCNNGG | 6 cut(s) | 1373, 2226, 2373, 2406, 2679, 2998 |
| BseGI | GGATG | 6 cut(s) | 424, 1243, 2080, 2668, 2689, 2875 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 257, 574, 2034, 2054, 2212, 2396 |
| BseMI | GCAATG | 1 cut(s) | 2129 |
| BseNI | ACTGG | 8 cut(s) | 252, 419, 495, 1175, 1239, 1948, 2208, 3157 |
| BseRI | GAGGAG | 1 cut(s) | 2300 |
| BseSI | GKGCMC | 2 cut(s) | 2047, 3140 |
| BseXI | GCAGC | 6 cut(s) | 337, 448, 637, 2103, 2162, 2249 |
| BseYI | CCCAGC | 1 cut(s) | 2840 |
| BsgI | GTGCAG | 4 cut(s) | 149, 1155, 1213, 1862 |
| Bsh1236I | CGCG | 1 cut(s) | 1212 |
| BshFI | GGCC | 6 cut(s) | 196, 418, 578, 1924, 2379, 2783 |
| BshNI | GGYRCC | 1 cut(s) | 1596 |
| BsiHKAI | GWGCWC | 5 cut(s) | 229, 472, 604, 1509, 3140 |
| BsiSI | CCGG | 1 cut(s) | 2779 |
| BsiWI | CGTACG | 1 cut(s) | 1958 |
| BslFI | GGGAC | 1 cut(s) | 3016 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 257, 574, 2034, 2054, 2212, 2396 |
| BsmAI | GTCTC | 4 cut(s) | 1208, 1290, 1475, 1922 |
| BsmBI | CGTCTC | 1 cut(s) | 1208 |
| BsmFI | GGGAC | 1 cut(s) | 3016 |
| BsmI | GAATGC | 1 cut(s) | 3199 |
| BsnI | GGCC | 6 cut(s) | 196, 418, 578, 1924, 2379, 2783 |
| Bso31I | GGTCTC | 1 cut(s) | 1290 |
| Bsp119I | TTCGAA | 1 cut(s) | 2699 |
| Bsp1286I | GDGCHC | 6 cut(s) | 229, 472, 604, 1509, 2047, 3140 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1079, 1565, 2583 |
| Bsp19I | CCATGG | 1 cut(s) | 2373 |
| BspACI | CCGC | 6 cut(s) | 193, 278, 521, 1212, 2119, 3186 |
| BspANI | GGCC | 6 cut(s) | 196, 418, 578, 1924, 2379, 2783 |
| BspFNI | CGCG | 1 cut(s) | 1212 |
| BspHI | TCATGA | 3 cut(s) | 1741, 1972, 2503 |
| BspLI | GGNNCC | 9 cut(s) | 36, 204, 250, 493, 579, 684, 886, 1598, 1656 |
| BspMAI | CTGCAG | 3 cut(s) | 286, 327, 627 |
| BspPI | GGATC | 7 cut(s) | 486, 499, 725, 950, 1740, 2381, 3255 |
| BspQI | GCTCTTC | 3 cut(s) | 1038, 1959, 3261 |
| BspT104I | TTCGAA | 1 cut(s) | 2699 |
| BspT107I | GGYRCC | 1 cut(s) | 1596 |
| BspTNI | GGTCTC | 1 cut(s) | 1290 |
| BsrBI | CCGCTC | 1 cut(s) | 3186 |
| BsrDI | GCAATG | 1 cut(s) | 2129 |
| BsrI | ACTGG | 8 cut(s) | 252, 419, 495, 1175, 1239, 1948, 2208, 3157 |
| BssECI | CCNNGG | 6 cut(s) | 1373, 2226, 2373, 2406, 2679, 2998 |
| BssNI | GRCGYC | 1 cut(s) | 1597 |
| BssT1I | CCWWGG | 4 cut(s) | 2226, 2373, 2406, 2679 |
| Bst2UI | CCWGG | 2 cut(s) | 63, 1659 |
| Bst6I | CTCTTC | 5 cut(s) | 1038, 1285, 1611, 1959, 3261 |
| BstACI | GRCGYC | 1 cut(s) | 1597 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2098, 2859 |
| BstBAI | YACGTR | 1 cut(s) | 673 |
| BstBI | TTCGAA | 1 cut(s) | 2699 |
| BstC8I | GCNNGC | 4 cut(s) | 282, 1403, 3048, 3261 |
| BstDSI | CCRYGG | 3 cut(s) | 1373, 2373, 2998 |
| BstF5I | GGATG | 6 cut(s) | 424, 1243, 2080, 2668, 2689, 2875 |
| BstFNI | CGCG | 1 cut(s) | 1212 |
| BstH2I | RGCGCY | 2 cut(s) | 1600, 2955 |
| BstHHI | GCGC | 4 cut(s) | 1212, 1599, 2589, 2954 |
| BstMAI | GTCTC | 4 cut(s) | 1208, 1290, 1475, 1922 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1603, 1661, 2098, 2113, 2775, 2859 |
| BstNI | CCWGG | 2 cut(s) | 63, 1659 |
| BstNSI | RCATGY | 8 cut(s) | 1470, 2482, 2639, 2853, 2934, 3050, 3060, 3263 |
| BstSCI | CCNGG | 3 cut(s) | 61, 1657, 2778 |
| BstSFI | CTRYAG | 4 cut(s) | 282, 323, 623, 3211 |
| BstSLI | GKGCMC | 2 cut(s) | 2047, 3140 |
| BstUI | CGCG | 1 cut(s) | 1212 |
| BstV1I | GCAGC | 6 cut(s) | 337, 448, 637, 2103, 2162, 2249 |
| BstX2I | RGATCY | 7 cut(s) | 491, 955, 1546, 1669, 1732, 2386, 3247 |
| BstYI | RGATCY | 7 cut(s) | 491, 955, 1546, 1669, 1732, 2386, 3247 |
| Bsu36I | CCTNAGG | 1 cut(s) | 198 |
| BsuRI | GGCC | 6 cut(s) | 196, 418, 578, 1924, 2379, 2783 |
| BtgI | CCRYGG | 3 cut(s) | 1373, 2373, 2998 |
| BtsCI | GGATG | 6 cut(s) | 424, 1243, 2080, 2668, 2689, 2875 |
| BtsI | GCAGTG | 1 cut(s) | 2074 |
| Cac8I | GCNNGC | 4 cut(s) | 282, 1403, 3048, 3261 |
| CaiI | CAGNNNCTG | 1 cut(s) | 971 |
| CciI | TCATGA | 3 cut(s) | 1741, 1972, 2503 |
| CfoI | GCGC | 4 cut(s) | 1212, 1599, 2589, 2954 |
| Cfr13I | GGNCC | 7 cut(s) | 248, 577, 885, 1630, 2377, 2532, 2781 |
| CseI | GACGC | 2 cut(s) | 1134, 3260 |
| Csp6I | GTAC | 4 cut(s) | 1248, 1915, 1959, 3228 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2578, 2613 |
| CviQI | GTAC | 4 cut(s) | 1248, 1915, 1959, 3228 |
| DinI | GGCGCC | 1 cut(s) | 1598 |
| DraI | TTTAAA | 2 cut(s) | 2052, 2367 |
| DraIII | CACNNNGTG | 2 cut(s) | 224, 467 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2269 |
| EaeI | YGGCCR | 1 cut(s) | 416 |
| Eam1104I | CTCTTC | 5 cut(s) | 1038, 1285, 1611, 1959, 3261 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2269 |
| EarI | CTCTTC | 5 cut(s) | 1038, 1285, 1611, 1959, 3261 |
| Ecl136II | GAGCTC | 1 cut(s) | 1507 |
| Eco130I | CCWWGG | 4 cut(s) | 2226, 2373, 2406, 2679 |
| Eco24I | GRGCYC | 1 cut(s) | 1509 |
| Eco31I | GGTCTC | 1 cut(s) | 1290 |
| Eco32I | GATATC | 1 cut(s) | 517 |
| Eco47I | GGWCC | 4 cut(s) | 248, 885, 1630, 2532 |
| Eco47III | AGCGCT | 1 cut(s) | 2953 |
| Eco53kI | GAGCTC | 1 cut(s) | 1507 |
| Eco57I | CTGAAG | 9 cut(s) | 225, 327, 468, 567, 627, 681, 1386, 1903, 3272 |
| Eco72I | CACGTG | 1 cut(s) | 673 |
| Eco81I | CCTNAGG | 1 cut(s) | 198 |
| EcoICRI | GAGCTC | 1 cut(s) | 1507 |
| EcoRI | GAATTC | 1 cut(s) | 1763 |
| EcoRII | CCWGG | 2 cut(s) | 61, 1657 |
| EcoRV | GATATC | 1 cut(s) | 517 |
| EcoT14I | CCWWGG | 4 cut(s) | 2226, 2373, 2406, 2679 |
| EcoT38I | GRGCYC | 1 cut(s) | 1509 |
| EgeI | GGCGCC | 1 cut(s) | 1598 |
| EheI | GGCGCC | 1 cut(s) | 1598 |
| ErhI | CCWWGG | 4 cut(s) | 2226, 2373, 2406, 2679 |
| Esp3I | CGTCTC | 1 cut(s) | 1208 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2447, 2479 |
| FaqI | GGGAC | 1 cut(s) | 3016 |
| FauI | CCCGC | 1 cut(s) | 528 |
| FauNDI | CATATG | 1 cut(s) | 813 |
| FbaI | TGATCA | 2 cut(s) | 1087, 2881 |
| FblI | GTMKAC | 1 cut(s) | 2475 |
| Fnu4HI | GCNGC | 9 cut(s) | 194, 278, 326, 437, 626, 2117, 2120, 2151, 2238 |
| FokI | GGATG | 6 cut(s) | 411, 1250, 2067, 2675, 2696, 2882 |
| FriOI | GRGCYC | 1 cut(s) | 1509 |
| Fsp4HI | GCNGC | 9 cut(s) | 194, 278, 326, 437, 626, 2117, 2120, 2151, 2238 |
| FspBI | CTAG | 1 cut(s) | 834 |
| GlaI | GCGC | 4 cut(s) | 1211, 1598, 2588, 2953 |
| GluI | GCNGC | 9 cut(s) | 194, 278, 326, 437, 626, 2117, 2120, 2151, 2238 |
| GsaI | CCCAGC | 1 cut(s) | 2844 |
| GsuI | CTGGAG | 6 cut(s) | 84, 192, 1641, 1965, 3086, 3174 |
| HaeII | RGCGCY | 2 cut(s) | 1600, 2955 |
| HaeIII | GGCC | 6 cut(s) | 196, 418, 578, 1924, 2379, 2783 |
| HapII | CCGG | 1 cut(s) | 2779 |
| HgaI | GACGC | 2 cut(s) | 1134, 3260 |
| HhaI | GCGC | 4 cut(s) | 1212, 1599, 2589, 2954 |
| Hin1I | GRCGYC | 1 cut(s) | 1597 |
| Hin6I | GCGC | 4 cut(s) | 1210, 1597, 2587, 2952 |
| HinP1I | GCGC | 4 cut(s) | 1210, 1597, 2587, 2952 |
| HincII | GTYRAC | 3 cut(s) | 158, 1219, 2476 |
| HindII | GTYRAC | 3 cut(s) | 158, 1219, 2476 |
| HindIII | AAGCTT | 1 cut(s) | 1154 |
| HpaI | GTTAAC | 1 cut(s) | 1219 |
| HpaII | CCGG | 1 cut(s) | 2779 |
| HphI | GGTGA | 6 cut(s) | 90, 937, 1859, 2069, 2273, 2549 |
| Hpy166II | GTNNAC | 6 cut(s) | 158, 1219, 1250, 2476, 2600, 3138 |
| Hpy8I | GTNNAC | 6 cut(s) | 158, 1219, 1250, 2476, 2600, 3138 |
| Hpy99I | CGWCG | 1 cut(s) | 3276 |
| HpyCH4IV | ACGT | 4 cut(s) | 672, 1961, 3036, 3238 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1603, 1661, 2098, 2113, 2775, 2859 |
| HpySE526I | ACGT | 4 cut(s) | 672, 1961, 3036, 3238 |
| Hsp92I | GRCGYC | 1 cut(s) | 1597 |
| HspAI | GCGC | 4 cut(s) | 1210, 1597, 2587, 2952 |
| KasI | GGCGCC | 1 cut(s) | 1596 |
| Ksp22I | TGATCA | 2 cut(s) | 1087, 2881 |
| KspAI | GTTAAC | 1 cut(s) | 1219 |
| LguI | GCTCTTC | 3 cut(s) | 1038, 1959, 3261 |
| LmnI | GCTCC | 7 cut(s) | 386, 607, 817, 1504, 1660, 1661, 3183 |
| Lsp1109I | GCAGC | 6 cut(s) | 337, 448, 637, 2103, 2162, 2249 |
| LweI | GCATC | 6 cut(s) | 164, 2412, 2561, 2569, 2818, 2860 |
| MaeI | CTAG | 1 cut(s) | 834 |
| MaeII | ACGT | 4 cut(s) | 672, 1961, 3036, 3238 |
| MbiI | CCGCTC | 1 cut(s) | 3186 |
| MfeI | CAATTG | 1 cut(s) | 42 |
| MflI | RGATCY | 7 cut(s) | 491, 955, 1546, 1669, 1732, 2386, 3247 |
| MhlI | GDGCHC | 6 cut(s) | 229, 472, 604, 1509, 2047, 3140 |
| Mly113I | GGCGCC | 1 cut(s) | 1597 |
| MlyI | GAGTC | 3 cut(s) | 962, 1581, 2968 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1953 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2502, 2562, 2868 |
| MspA1I | CMGCKG | 1 cut(s) | 2153 |
| MspI | CCGG | 1 cut(s) | 2779 |
| MspR9I | CCNGG | 3 cut(s) | 63, 1659, 2780 |
| MunI | CAATTG | 1 cut(s) | 42 |
| Mva1269I | GAATGC | 1 cut(s) | 3199 |
| MvaI | CCWGG | 2 cut(s) | 63, 1659 |
| MvnI | CGCG | 1 cut(s) | 1212 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1603, 1661, 2098, 2113, 2775, 2859 |
| NarI | GGCGCC | 1 cut(s) | 1597 |
| NciI | CCSGG | 1 cut(s) | 2780 |
| NcoI | CCATGG | 1 cut(s) | 2373 |
| NdeI | CATATG | 1 cut(s) | 813 |
| NlaIV | GGNNCC | 9 cut(s) | 36, 204, 250, 493, 579, 684, 886, 1598, 1656 |
| NmuCI | GTSAC | 7 cut(s) | 216, 1865, 1939, 2174, 2261, 2957, 3161 |
| NspI | RCATGY | 8 cut(s) | 1470, 2482, 2639, 2853, 2934, 3050, 3060, 3263 |
| NspV | TTCGAA | 1 cut(s) | 2699 |
| OliI | CACNNNNGTG | 1 cut(s) | 2562 |
| PaeI | GCATGC | 2 cut(s) | 3050, 3263 |
| PagI | TCATGA | 3 cut(s) | 1741, 1972, 2503 |
| PciI | ACATGT | 3 cut(s) | 1466, 2635, 3056 |
| PciSI | GCTCTTC | 3 cut(s) | 1038, 1959, 3261 |
| PctI | GAATGC | 1 cut(s) | 3199 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1953 |
| Pfl23II | CGTACG | 1 cut(s) | 1958 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 574 |
| PfoI | TCCNGGA | 2 cut(s) | 61, 1657 |
| PkrI | GCNGC | 9 cut(s) | 195, 279, 327, 438, 627, 2118, 2121, 2152, 2239 |
| PleI | GAGTC | 3 cut(s) | 962, 1581, 2968 |
| PluTI | GGCGCC | 1 cut(s) | 1600 |
| PmaCI | CACGTG | 1 cut(s) | 673 |
| PmlI | CACGTG | 1 cut(s) | 673 |
| PpsI | GAGTC | 3 cut(s) | 962, 1581, 2968 |
| Ppu21I | YACGTR | 1 cut(s) | 673 |
| PscI | ACATGT | 3 cut(s) | 1466, 2635, 3056 |
| PshBI | ATTAAT | 1 cut(s) | 654 |
| Psp124BI | GAGCTC | 1 cut(s) | 1509 |
| Psp6I | CCWGG | 2 cut(s) | 61, 1657 |
| PspCI | CACGTG | 1 cut(s) | 673 |
| PspFI | CCCAGC | 1 cut(s) | 2840 |
| PspGI | CCWGG | 2 cut(s) | 61, 1657 |
| PspLI | CGTACG | 1 cut(s) | 1958 |
| PspN4I | GGNNCC | 9 cut(s) | 36, 204, 250, 493, 579, 684, 886, 1598, 1656 |
| PspPI | GGNCC | 7 cut(s) | 248, 577, 885, 1630, 2377, 2532, 2781 |
| PstI | CTGCAG | 3 cut(s) | 286, 327, 627 |
| PstNI | CAGNNNCTG | 1 cut(s) | 971 |
| PsuI | RGATCY | 7 cut(s) | 491, 955, 1546, 1669, 1732, 2386, 3247 |
| PvuII | CAGCTG | 1 cut(s) | 2153 |
| RsaI | GTAC | 4 cut(s) | 1249, 1916, 1960, 3229 |
| RsaNI | GTAC | 4 cut(s) | 1248, 1915, 1959, 3228 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2502, 2562, 2868 |
| SacI | GAGCTC | 1 cut(s) | 1509 |
| SalI | GTCGAC | 1 cut(s) | 2474 |
| SapI | GCTCTTC | 3 cut(s) | 1038, 1959, 3261 |
| SatI | GCNGC | 9 cut(s) | 194, 278, 326, 437, 626, 2117, 2120, 2151, 2238 |
| Sau96I | GGNCC | 7 cut(s) | 248, 577, 885, 1630, 2377, 2532, 2781 |
| ScaI | AGTACT | 1 cut(s) | 1916 |
| SchI | GAGTC | 3 cut(s) | 962, 1581, 2968 |
| ScrFI | CCNGG | 3 cut(s) | 63, 1659, 2780 |
| SduI | GDGCHC | 6 cut(s) | 229, 472, 604, 1509, 2047, 3140 |
| SfaNI | GCATC | 6 cut(s) | 164, 2412, 2561, 2569, 2818, 2860 |
| SfcI | CTRYAG | 4 cut(s) | 282, 323, 623, 3211 |
| SfoI | GGCGCC | 1 cut(s) | 1598 |
| SfuI | TTCGAA | 1 cut(s) | 2699 |
| SinI | GGWCC | 4 cut(s) | 248, 885, 1630, 2532 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2502, 2562, 2868 |
| SmlI | CTYRAG | 4 cut(s) | 1205, 1508, 1994, 2734 |
| SmoI | CTYRAG | 4 cut(s) | 1205, 1508, 1994, 2734 |
| SphI | GCATGC | 2 cut(s) | 3050, 3263 |
| SsiI | CCGC | 6 cut(s) | 193, 278, 521, 1212, 2119, 3186 |
| SspDI | GGCGCC | 1 cut(s) | 1596 |
| SspI | AATATT | 5 cut(s) | 508, 798, 1980, 2302, 2514 |
| SspMI | CTAG | 1 cut(s) | 834 |
| SstI | GAGCTC | 1 cut(s) | 1509 |
| StyD4I | CCNGG | 3 cut(s) | 61, 1657, 2778 |
| StyI | CCWWGG | 4 cut(s) | 2226, 2373, 2406, 2679 |
| TaiI | ACGT | 4 cut(s) | 675, 1964, 3039, 3241 |
| TaqI | TCGA | 7 cut(s) | 1067, 1288, 2475, 2699, 2938, 3013, 3203 |
| TatI | WGTACW | 2 cut(s) | 1247, 1914 |
| TauI | GCSGC | 3 cut(s) | 196, 280, 2122 |
| TseFI | GTSAC | 7 cut(s) | 216, 1865, 1939, 2174, 2261, 2957, 3161 |
| TseI | GCWGC | 6 cut(s) | 325, 436, 625, 2116, 2150, 2237 |
| Tsp45I | GTSAC | 7 cut(s) | 216, 1865, 1939, 2174, 2261, 2957, 3161 |
| TspGWI | ACGGA | 1 cut(s) | 1684 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 574 |
| VneI | GTGCAC | 1 cut(s) | 3136 |
| VpaK11BI | GGWCC | 4 cut(s) | 248, 885, 1630, 2532 |
| VspI | ATTAAT | 1 cut(s) | 654 |
| XapI | RAATTY | 3 cut(s) | 1686, 1763, 2551 |
| XceI | RCATGY | 8 cut(s) | 1470, 2482, 2639, 2853, 2934, 3050, 3060, 3263 |
| XmiI | GTMKAC | 1 cut(s) | 2475 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1953 |
| XspI | CTAG | 1 cut(s) | 834 |
| ZrmI | AGTACT | 1 cut(s) | 1916 |