histone acetyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45470 FvH4_6g45470 FvH4_6g45470 FvH4_6g45470 |
| malus_domestica | MD09G1082700.v1.1 MD09G1082800.v1.1 MD17G1073200.v1.1 |
| prunus_persica | Prupe.3G240900_v2.0.a1 Prupe.3G240900_v2.0.a1 |
| pyrus_communis | pycom09g00920 pycom17g07410 |
| rosa_chinensis | RchiOBHm_Chr2g0163411 |
| rosa_laevigata | RLG00000021391 |
| rosa_multiflora | Rmu_ssc0000231.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00087360 |
| rosa_rugosa | Rorug02G0502300 Rorug02G0502400 |
| rosa_samantha | Rh2AG569400 Rh2BG581500 Rh2CG551300 Rh2DG591400 |
| rosa_wichuraiana | Rw2G047120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 600 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1383, 3657 |
| Acc36I | ACCTGC | 1 cut(s) | 661 |
| AccB1I | GGYRCC | 2 cut(s) | 2288, 2868 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4187 |
| AccI | GTMKAC | 1 cut(s) | 3747 |
| AciI | CCGC | 3 cut(s) | 914, 1396, 3391 |
| AclWI | GGATC | 4 cut(s) | 1985, 2139, 2152, 3012 |
| AcoI | YGGCCR | 2 cut(s) | 61, 1397 |
| AcvI | CACGTG | 1 cut(s) | 4122 |
| AcyI | GRCGYC | 2 cut(s) | 705, 2869 |
| AdeI | CACNNNGTG | 2 cut(s) | 1427, 2544 |
| AfaI | GTAC | 6 cut(s) | 33, 427, 508, 1439, 3188, 3232 |
| AflII | CTTAAG | 2 cut(s) | 499, 2249 |
| AflIII | ACRYGT | 2 cut(s) | 3907, 4119 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3541, 4281 |
| AhlI | ACTAGT | 2 cut(s) | 509, 2099 |
| AjnI | CCWGG | 4 cut(s) | 285, 985, 1711, 2929 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 424, 456 |
| AleI | CACNNNNGTG | 1 cut(s) | 3834 |
| Alw21I | GWGCWC | 8 cut(s) | 1264, 1432, 1564, 1732, 1864, 2695, 2781, 4433 |
| Alw44I | GTGCAC | 1 cut(s) | 4429 |
| AlwI | GGATC | 4 cut(s) | 1985, 2139, 2152, 3012 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 476, 2243, 3703 |
| Ama87I | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| AoxI | GGCC | 7 cut(s) | 49, 61, 661, 1151, 1236, 1397, 3194 |
| ApaLI | GTGCAC | 1 cut(s) | 4429 |
| AseI | ATTAAT | 3 cut(s) | 1314, 1614, 1914 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1176, 1272, 1476, 1572, 3225 |
| AspLEI | GCGC | 4 cut(s) | 171, 2484, 2871, 3861 |
| AspS9I | GGNCC | 5 cut(s) | 176, 582, 1151, 1237, 1451 |
| AsuC2I | CCSGG | 4 cut(s) | 80, 1345, 2133, 4052 |
| AsuHPI | GGTGA | 2 cut(s) | 3545, 3821 |
| AsuII | TTCGAA | 1 cut(s) | 3971 |
| AsuNHI | GCTAGC | 1 cut(s) | 262 |
| AvaI | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| AvaII | GGWCC | 3 cut(s) | 176, 582, 1451 |
| BaeGI | GKGCMC | 4 cut(s) | 2293, 2473, 3317, 4433 |
| BalI | TGGCCA | 1 cut(s) | 63 |
| BamHI | GGATCC | 1 cut(s) | 2144 |
| BanI | GGYRCC | 2 cut(s) | 2288, 2868 |
| BanII | GRGCYC | 1 cut(s) | 2781 |
| BbrPI | CACGTG | 1 cut(s) | 4122 |
| Bbv12I | GWGCWC | 8 cut(s) | 1264, 1432, 1564, 1732, 1864, 2695, 2781, 4433 |
| BbvCI | CCTCAGC | 2 cut(s) | 709, 3555 |
| BceAI | ACGGC | 1 cut(s) | 3505 |
| BciT130I | CCWGG | 4 cut(s) | 287, 987, 1713, 2931 |
| BciVI | GTATCC | 1 cut(s) | 1318 |
| BclI | TGATCA | 3 cut(s) | 559, 2359, 3564 |
| BcnI | CCSGG | 4 cut(s) | 80, 1345, 2133, 4052 |
| BcuI | ACTAGT | 2 cut(s) | 509, 2099 |
| BfaI | CTAG | 8 cut(s) | 149, 180, 263, 510, 1155, 2094, 2100, 2507 |
| BfmI | CTRYAG | 8 cut(s) | 477, 1283, 1583, 1883, 2049, 2464, 4270, 4504 |
| BfoI | RGCGCY | 1 cut(s) | 2872 |
| BfrI | CTTAAG | 2 cut(s) | 499, 2249 |
| BfuAI | ACCTGC | 1 cut(s) | 661 |
| BfuI | GTATCC | 1 cut(s) | 1318 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 150 |
| BglII | AGATCT | 4 cut(s) | 1008, 2818, 2941, 4173 |
| BlpI | GCTNAGC | 2 cut(s) | 2837, 3855 |
| BmcAI | AGTACT | 1 cut(s) | 3188 |
| Bme1390I | CCNGG | 8 cut(s) | 80, 287, 987, 1345, 1713, 2133, 2931, 4052 |
| Bme18I | GGWCC | 3 cut(s) | 176, 582, 1451 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3541, 4281 |
| BmeT110I | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| BmgT120I | GGNCC | 5 cut(s) | 176, 582, 1151, 1237, 1451 |
| BmrFI | CCNGG | 8 cut(s) | 80, 287, 987, 1345, 1713, 2133, 2931, 4052 |
| BmrI | ACTGGG | 4 cut(s) | 1449, 1749, 3492, 3713 |
| BmsI | GCATC | 7 cut(s) | 275, 379, 722, 3684, 3833, 4090, 4132 |
| BmtI | GCTAGC | 1 cut(s) | 266 |
| BmuI | ACTGGG | 4 cut(s) | 1449, 1749, 3492, 3713 |
| BoxI | GACNNNNGTC | 2 cut(s) | 855, 3802 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 692, 724, 3110, 3142 |
| BpmI | CTGGAG | 5 cut(s) | 356, 1095, 1395, 1695, 4467 |
| Bpu10I | CCTNAGC | 2 cut(s) | 709, 3555 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2837, 3855 |
| Bpu14I | TTCGAA | 1 cut(s) | 3971 |
| BpuMI | CCSGG | 4 cut(s) | 80, 1345, 2133, 4052 |
| BsaAI | YACGTR | 3 cut(s) | 125, 4122, 4346 |
| BsaHI | GRCGYC | 2 cut(s) | 705, 2869 |
| BsaJI | CCNNGG | 7 cut(s) | 853, 879, 1100, 1700, 3498, 3645, 3951 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 332, 362, 766, 796 |
| Bse1I | ACTGG | 7 cut(s) | 1455, 1755, 2025, 3487, 3657, 3708, 4450 |
| Bse3DI | GCAATG | 3 cut(s) | 624, 2674, 3401 |
| BseBI | CCWGG | 4 cut(s) | 287, 987, 1713, 2931 |
| BseDI | CCNNGG | 7 cut(s) | 853, 879, 1100, 1700, 3498, 3645, 3951 |
| BseMI | GCAATG | 3 cut(s) | 624, 2674, 3401 |
| BseNI | ACTGG | 7 cut(s) | 1455, 1755, 2025, 3487, 3657, 3708, 4450 |
| BseRI | GAGGAG | 6 cut(s) | 335, 338, 353, 774, 1293, 1593 |
| BseSI | GKGCMC | 4 cut(s) | 2293, 2473, 3317, 4433 |
| BseYI | CCCAGC | 3 cut(s) | 106, 4112, 4161 |
| BsgI | GTGCAG | 3 cut(s) | 2485, 4144, 4218 |
| BshFI | GGCC | 7 cut(s) | 51, 63, 663, 1153, 1238, 1399, 3196 |
| BshNI | GGYRCC | 2 cut(s) | 2288, 2868 |
| BsiHKAI | GWGCWC | 8 cut(s) | 1264, 1432, 1564, 1732, 1864, 2695, 2781, 4433 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| BsiSI | CCGG | 4 cut(s) | 80, 1345, 2133, 4051 |
| BslFI | GGGAC | 6 cut(s) | 81, 568, 787, 3663, 3810, 3890 |
| BsmFI | GGGAC | 6 cut(s) | 81, 568, 787, 3663, 3810, 3890 |
| BsmI | GAATGC | 4 cut(s) | 874, 2738, 3494, 4492 |
| BsnI | GGCC | 7 cut(s) | 51, 63, 663, 1153, 1238, 1399, 3196 |
| BsoBI | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| Bsp119I | TTCGAA | 1 cut(s) | 3971 |
| Bsp1407I | TGTACA | 1 cut(s) | 31 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2837, 3855 |
| Bsp19I | CCATGG | 3 cut(s) | 853, 879, 3645 |
| BspACI | CCGC | 3 cut(s) | 914, 1396, 3391 |
| BspANI | GGCC | 7 cut(s) | 51, 63, 663, 1153, 1238, 1399, 3196 |
| BspHI | TCATGA | 3 cut(s) | 1564, 3013, 3244 |
| BspMAI | CTGCAG | 4 cut(s) | 481, 1287, 1587, 1887 |
| BspMI | ACCTGC | 1 cut(s) | 661 |
| BspOI | GCTAGC | 1 cut(s) | 266 |
| BspPI | GGATC | 4 cut(s) | 1985, 2139, 2152, 3012 |
| BspQI | GCTCTTC | 3 cut(s) | 2166, 2310, 3231 |
| BspT104I | TTCGAA | 1 cut(s) | 3971 |
| BspT107I | GGYRCC | 2 cut(s) | 2288, 2868 |
| BspTI | CTTAAG | 2 cut(s) | 499, 2249 |
| BsrDI | GCAATG | 3 cut(s) | 624, 2674, 3401 |
| BsrGI | TGTACA | 1 cut(s) | 31 |
| BsrI | ACTGG | 7 cut(s) | 1455, 1755, 2025, 3487, 3657, 3708, 4450 |
| BssECI | CCNNGG | 7 cut(s) | 853, 879, 1100, 1700, 3498, 3645, 3951 |
| BssNI | GRCGYC | 2 cut(s) | 705, 2869 |
| BssT1I | CCWWGG | 5 cut(s) | 853, 879, 3498, 3645, 3951 |
| Bst2UI | CCWGG | 4 cut(s) | 287, 987, 1713, 2931 |
| Bst6I | CTCTTC | 6 cut(s) | 928, 2046, 2166, 2310, 2883, 3231 |
| BstACI | GRCGYC | 2 cut(s) | 705, 2869 |
| BstAFI | CTTAAG | 2 cut(s) | 499, 2249 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2544, 3816, 4131 |
| BstAUI | TGTACA | 1 cut(s) | 31 |
| BstBAI | YACGTR | 3 cut(s) | 125, 4122, 4346 |
| BstBI | TTCGAA | 1 cut(s) | 3971 |
| BstC8I | GCNNGC | 5 cut(s) | 264, 2675, 3313, 4204, 4292 |
| BstDSI | CCRYGG | 3 cut(s) | 853, 879, 3645 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 668, 1158, 2049 |
| BstH2I | RGCGCY | 1 cut(s) | 2872 |
| BstHHI | GCGC | 4 cut(s) | 171, 2484, 2871, 3861 |
| BstNI | CCWGG | 4 cut(s) | 287, 987, 1713, 2931 |
| BstNSI | RCATGY | 6 cut(s) | 1934, 3754, 3883, 3911, 4206, 4540 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 855, 3802 |
| BstSCI | CCNGG | 8 cut(s) | 78, 285, 985, 1343, 1711, 2131, 2929, 4050 |
| BstSFI | CTRYAG | 8 cut(s) | 477, 1283, 1583, 1883, 2049, 2464, 4270, 4504 |
| BstSLI | GKGCMC | 4 cut(s) | 2293, 2473, 3317, 4433 |
| BstX2I | RGATCY | 6 cut(s) | 1008, 2144, 2818, 2941, 3004, 4173 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 59, 640 |
| BstYI | RGATCY | 6 cut(s) | 1008, 2144, 2818, 2941, 3004, 4173 |
| BsuI | GTATCC | 1 cut(s) | 1318 |
| BsuRI | GGCC | 7 cut(s) | 51, 63, 663, 1153, 1238, 1399, 3196 |
| BtgI | CCRYGG | 3 cut(s) | 853, 879, 3645 |
| BtsI | GCAGTG | 4 cut(s) | 720, 2491, 3549, 3769 |
| BveI | ACCTGC | 1 cut(s) | 661 |
| Cac8I | GCNNGC | 5 cut(s) | 264, 2675, 3313, 4204, 4292 |
| CaiI | CAGNNNCTG | 3 cut(s) | 476, 2243, 3703 |
| CciI | TCATGA | 3 cut(s) | 1564, 3013, 3244 |
| CfoI | GCGC | 4 cut(s) | 171, 2484, 2871, 3861 |
| Cfr13I | GGNCC | 5 cut(s) | 176, 582, 1151, 1237, 1451 |
| CseI | GACGC | 3 cut(s) | 713, 2406, 3807 |
| Csp6I | GTAC | 6 cut(s) | 32, 426, 507, 1438, 3187, 3231 |
| CviQI | GTAC | 6 cut(s) | 32, 426, 507, 1438, 3187, 3231 |
| DinI | GGCGCC | 1 cut(s) | 2870 |
| DraI | TTTAAA | 2 cut(s) | 2191, 3639 |
| DraIII | CACNNNGTG | 2 cut(s) | 1427, 2544 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1383, 3657 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3541, 4281 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1383, 3657 |
| EaeI | YGGCCR | 2 cut(s) | 61, 1397 |
| Eam1104I | CTCTTC | 6 cut(s) | 928, 2046, 2166, 2310, 2883, 3231 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3541, 4281 |
| EarI | CTCTTC | 6 cut(s) | 928, 2046, 2166, 2310, 2883, 3231 |
| Ecl136II | GAGCTC | 1 cut(s) | 2779 |
| Eco130I | CCWWGG | 5 cut(s) | 853, 879, 3498, 3645, 3951 |
| Eco147I | AGGCCT | 1 cut(s) | 663 |
| Eco24I | GRGCYC | 1 cut(s) | 2781 |
| Eco47I | GGWCC | 3 cut(s) | 176, 582, 1451 |
| Eco53kI | GAGCTC | 1 cut(s) | 2779 |
| Eco72I | CACGTG | 1 cut(s) | 4122 |
| Eco88I | CYCGRG | 3 cut(s) | 1101, 1701, 2559 |
| EcoICRI | GAGCTC | 1 cut(s) | 2779 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 668, 1158, 2049 |
| EcoO109I | RGGNCCY | 2 cut(s) | 176, 582 |
| EcoRI | GAATTC | 4 cut(s) | 4, 88, 1822, 3035 |
| EcoRII | CCWGG | 4 cut(s) | 285, 985, 1711, 2929 |
| EcoT14I | CCWWGG | 5 cut(s) | 853, 879, 3498, 3645, 3951 |
| EcoT22I | ATGCAT | 1 cut(s) | 2738 |
| EcoT38I | GRGCYC | 1 cut(s) | 2781 |
| EgeI | GGCGCC | 1 cut(s) | 2870 |
| EheI | GGCGCC | 1 cut(s) | 2870 |
| ErhI | CCWWGG | 5 cut(s) | 853, 879, 3498, 3645, 3951 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1164, 1196, 3719, 3751 |
| FaqI | GGGAC | 6 cut(s) | 81, 568, 787, 3663, 3810, 3890 |
| FauNDI | CATATG | 2 cut(s) | 1123, 2738 |
| FbaI | TGATCA | 3 cut(s) | 559, 2359, 3564 |
| FblI | GTMKAC | 1 cut(s) | 3747 |
| FriOI | GRGCYC | 1 cut(s) | 2781 |
| FspBI | CTAG | 8 cut(s) | 149, 180, 263, 510, 1155, 2094, 2100, 2507 |
| GlaI | GCGC | 4 cut(s) | 170, 2483, 2870, 3860 |
| GsaI | CCCAGC | 3 cut(s) | 110, 4116, 4165 |
| GsuI | CTGGAG | 5 cut(s) | 356, 1095, 1395, 1695, 4467 |
| HaeII | RGCGCY | 1 cut(s) | 2872 |
| HaeIII | GGCC | 7 cut(s) | 51, 63, 663, 1153, 1238, 1399, 3196 |
| HapII | CCGG | 4 cut(s) | 80, 1345, 2133, 4051 |
| HgaI | GACGC | 3 cut(s) | 713, 2406, 3807 |
| HhaI | GCGC | 4 cut(s) | 171, 2484, 2871, 3861 |
| Hin1I | GRCGYC | 2 cut(s) | 705, 2869 |
| Hin6I | GCGC | 4 cut(s) | 169, 2482, 2869, 3859 |
| HinP1I | GCGC | 4 cut(s) | 169, 2482, 2869, 3859 |
| HincII | GTYRAC | 4 cut(s) | 568, 3748, 3895, 4245 |
| HindII | GTYRAC | 4 cut(s) | 568, 3748, 3895, 4245 |
| HindIII | AAGCTT | 1 cut(s) | 2426 |
| HpaI | GTTAAC | 1 cut(s) | 568 |
| HpaII | CCGG | 4 cut(s) | 80, 1345, 2133, 4051 |
| HphI | GGTGA | 2 cut(s) | 3545, 3821 |
| Hpy166II | GTNNAC | 9 cut(s) | 122, 426, 568, 2491, 3748, 3895, 3983, 4245, 4431 |
| Hpy8I | GTNNAC | 9 cut(s) | 122, 426, 568, 2491, 3748, 3895, 3983, 4245, 4431 |
| Hpy99I | CGWCG | 2 cut(s) | 1192, 2422 |
| HpyCH4IV | ACGT | 5 cut(s) | 124, 564, 2540, 4121, 4345 |
| HpySE526I | ACGT | 5 cut(s) | 124, 564, 2540, 4121, 4345 |
| Hsp92I | GRCGYC | 2 cut(s) | 705, 2869 |
| HspAI | GCGC | 4 cut(s) | 169, 2482, 2869, 3859 |
| KasI | GGCGCC | 1 cut(s) | 2868 |
| KflI | GGGWCCC | 1 cut(s) | 582 |
| Ksp22I | TGATCA | 3 cut(s) | 559, 2359, 3564 |
| KspAI | GTTAAC | 1 cut(s) | 568 |
| LguI | GCTCTTC | 3 cut(s) | 2166, 2310, 3231 |
| LmnI | GCTCC | 7 cut(s) | 787, 1267, 1543, 1843, 1867, 2077, 3770 |
| LweI | GCATC | 7 cut(s) | 275, 379, 722, 3684, 3833, 4090, 4132 |
| MaeI | CTAG | 8 cut(s) | 149, 180, 263, 510, 1155, 2094, 2100, 2507 |
| MaeII | ACGT | 5 cut(s) | 124, 564, 2540, 4121, 4345 |
| MaeIII | GTNAC | 6 cut(s) | 1419, 1924, 2371, 3502, 3533, 4229 |
| MflI | RGATCY | 6 cut(s) | 1008, 2144, 2818, 2941, 3004, 4173 |
| MlsI | TGGCCA | 1 cut(s) | 63 |
| MluNI | TGGCCA | 1 cut(s) | 63 |
| Mly113I | GGCGCC | 1 cut(s) | 2869 |
| MlyI | GAGTC | 8 cut(s) | 515, 2234, 2564, 2853, 2943, 3590, 4240, 4291 |
| Mox20I | TGGCCA | 1 cut(s) | 63 |
| Mph1103I | ATGCAT | 1 cut(s) | 2738 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1176, 1272, 1476, 1572, 3225 |
| MscI | TGGCCA | 1 cut(s) | 63 |
| MslI | CAYNNNNRTG | 4 cut(s) | 3774, 3834, 4140, 4348 |
| Msp20I | TGGCCA | 1 cut(s) | 63 |
| MspA1I | CMGCKG | 1 cut(s) | 914 |
| MspCI | CTTAAG | 2 cut(s) | 499, 2249 |
| MspI | CCGG | 4 cut(s) | 80, 1345, 2133, 4051 |
| MspR9I | CCNGG | 8 cut(s) | 80, 287, 987, 1345, 1713, 2133, 2931, 4052 |
| Mva1269I | GAATGC | 4 cut(s) | 874, 2738, 3494, 4492 |
| MvaI | CCWGG | 4 cut(s) | 287, 987, 1713, 2931 |
| NarI | GGCGCC | 1 cut(s) | 2869 |
| NciI | CCSGG | 4 cut(s) | 80, 1345, 2133, 4052 |
| NcoI | CCATGG | 3 cut(s) | 853, 879, 3645 |
| NdeI | CATATG | 2 cut(s) | 1123, 2738 |
| NheI | GCTAGC | 1 cut(s) | 262 |
| NmuCI | GTSAC | 4 cut(s) | 1419, 2371, 3533, 4229 |
| NsiI | ATGCAT | 1 cut(s) | 2738 |
| NspI | RCATGY | 6 cut(s) | 1934, 3754, 3883, 3911, 4206, 4540 |
| NspV | TTCGAA | 1 cut(s) | 3971 |
| OliI | CACNNNNGTG | 1 cut(s) | 3834 |
| PaeI | GCATGC | 1 cut(s) | 4206 |
| PaeR7I | CTCGAG | 1 cut(s) | 2559 |
| PagI | TCATGA | 3 cut(s) | 1564, 3013, 3244 |
| PceI | AGGCCT | 1 cut(s) | 663 |
| PciI | ACATGT | 1 cut(s) | 3907 |
| PciSI | GCTCTTC | 3 cut(s) | 2166, 2310, 3231 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 462 |
| PctI | GAATGC | 4 cut(s) | 874, 2738, 3494, 4492 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1176, 1272, 1476, 1572, 3225 |
| PflFI | GACNNNGTC | 1 cut(s) | 346 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4187 |
| PfoI | TCCNGGA | 5 cut(s) | 285, 1343, 1711, 2131, 2929 |
| PleI | GAGTC | 8 cut(s) | 515, 2234, 2563, 2853, 2942, 3590, 4240, 4290 |
| PluTI | GGCGCC | 1 cut(s) | 2872 |
| PmaCI | CACGTG | 1 cut(s) | 4122 |
| PmlI | CACGTG | 1 cut(s) | 4122 |
| PpsI | GAGTC | 8 cut(s) | 515, 2234, 2563, 2853, 2942, 3590, 4240, 4290 |
| Ppu21I | YACGTR | 3 cut(s) | 125, 4122, 4346 |
| PpuMI | RGGWCCY | 2 cut(s) | 176, 582 |
| PscI | ACATGT | 1 cut(s) | 3907 |
| PshAI | GACNNNNGTC | 2 cut(s) | 855, 3802 |
| PshBI | ATTAAT | 3 cut(s) | 1314, 1614, 1914 |
| PsiI | TTATAA | 1 cut(s) | 600 |
| Psp124BI | GAGCTC | 1 cut(s) | 2781 |
| Psp5II | RGGWCCY | 2 cut(s) | 176, 582 |
| Psp6I | CCWGG | 4 cut(s) | 285, 985, 1711, 2929 |
| PspCI | CACGTG | 1 cut(s) | 4122 |
| PspFI | CCCAGC | 3 cut(s) | 106, 4112, 4161 |
| PspGI | CCWGG | 4 cut(s) | 285, 985, 1711, 2929 |
| PspPI | GGNCC | 5 cut(s) | 176, 582, 1151, 1237, 1451 |
| PspPPI | RGGWCCY | 2 cut(s) | 176, 582 |
| PstI | CTGCAG | 4 cut(s) | 481, 1287, 1587, 1887 |
| PstNI | CAGNNNCTG | 3 cut(s) | 476, 2243, 3703 |
| PsuI | RGATCY | 6 cut(s) | 1008, 2144, 2818, 2941, 3004, 4173 |
| PsyI | GACNNNGTC | 1 cut(s) | 346 |
| RsaI | GTAC | 6 cut(s) | 33, 427, 508, 1439, 3188, 3232 |
| RsaNI | GTAC | 6 cut(s) | 32, 426, 507, 1438, 3187, 3231 |
| RseI | CAYNNNNRTG | 4 cut(s) | 3774, 3834, 4140, 4348 |
| SacI | GAGCTC | 1 cut(s) | 2781 |
| SalI | GTCGAC | 1 cut(s) | 3746 |
| SapI | GCTCTTC | 3 cut(s) | 2166, 2310, 3231 |
| Sau96I | GGNCC | 5 cut(s) | 176, 582, 1151, 1237, 1451 |
| ScaI | AGTACT | 1 cut(s) | 3188 |
| SchI | GAGTC | 8 cut(s) | 515, 2234, 2564, 2853, 2943, 3590, 4240, 4291 |
| ScrFI | CCNGG | 8 cut(s) | 80, 287, 987, 1345, 1713, 2133, 2931, 4052 |
| SfaNI | GCATC | 7 cut(s) | 275, 379, 722, 3684, 3833, 4090, 4132 |
| SfcI | CTRYAG | 8 cut(s) | 477, 1283, 1583, 1883, 2049, 2464, 4270, 4504 |
| SfoI | GGCGCC | 1 cut(s) | 2870 |
| Sfr274I | CTCGAG | 1 cut(s) | 2559 |
| SfuI | TTCGAA | 1 cut(s) | 3971 |
| SinI | GGWCC | 3 cut(s) | 176, 582, 1451 |
| SlaI | CTCGAG | 1 cut(s) | 2559 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 3774, 3834, 4140, 4348 |
| SpeI | ACTAGT | 2 cut(s) | 509, 2099 |
| SphI | GCATGC | 1 cut(s) | 4206 |
| SseBI | AGGCCT | 1 cut(s) | 663 |
| SsiI | CCGC | 3 cut(s) | 914, 1396, 3391 |
| SspDI | GGCGCC | 1 cut(s) | 2868 |
| SspI | AATATT | 5 cut(s) | 979, 1468, 1768, 2528, 4460 |
| SspMI | CTAG | 8 cut(s) | 149, 180, 263, 510, 1155, 2094, 2100, 2507 |
| SstI | GAGCTC | 1 cut(s) | 2781 |
| StuI | AGGCCT | 1 cut(s) | 663 |
| StyD4I | CCNGG | 8 cut(s) | 78, 285, 985, 1343, 1711, 2131, 2929, 4050 |
| StyI | CCWWGG | 5 cut(s) | 853, 879, 3498, 3645, 3951 |
| TaiI | ACGT | 5 cut(s) | 127, 567, 2543, 4124, 4348 |
| TaqI | TCGA | 8 cut(s) | 1190, 2560, 2904, 2937, 3747, 3971, 4285, 4496 |
| TatI | WGTACW | 2 cut(s) | 31, 3186 |
| TauI | GCSGC | 2 cut(s) | 1399, 3394 |
| TseFI | GTSAC | 4 cut(s) | 1419, 2371, 3533, 4229 |
| Tsp45I | GTSAC | 4 cut(s) | 1419, 2371, 3533, 4229 |
| TspGWI | ACGGA | 1 cut(s) | 2390 |
| Tth111I | GACNNNGTC | 1 cut(s) | 346 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4187 |
| Vha464I | CTTAAG | 2 cut(s) | 499, 2249 |
| VneI | GTGCAC | 1 cut(s) | 4429 |
| VpaK11BI | GGWCC | 3 cut(s) | 176, 582, 1451 |
| VspI | ATTAAT | 3 cut(s) | 1314, 1614, 1914 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 668, 1158, 2049 |
| XceI | RCATGY | 6 cut(s) | 1934, 3754, 3883, 3911, 4206, 4540 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 250 |
| XhoI | CTCGAG | 1 cut(s) | 2559 |
| XmiI | GTMKAC | 1 cut(s) | 3747 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1176, 1272, 1476, 1572, 3225 |
| XspI | CTAG | 8 cut(s) | 149, 180, 263, 510, 1155, 2094, 2100, 2507 |
| ZrmI | AGTACT | 1 cut(s) | 3188 |
| Zsp2I | ATGCAT | 1 cut(s) | 2738 |