Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0009704

Physical Location & Seq

Genomic Coordinates Forward (+)

679979 .. 684801

Gene Structure 4823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g00920.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGAAGTCTTATAAAATCAGCAAGATGGATGTACAGAGATACAATTCAGGGCAAACCCTTGGCCATATATCTAACTACCCGGAGCTGAATCCTTTTTTACCAGGAGGGGATGGTTTACGTCGTCAAGCGTTAAAATGCCCGGTAGTCTACTTGAGGGATTGGCGCAAAGGTCCTAAAGTTATCCGCTTTCATAATTTCGTTAGGAAACTACTTAATGACTACTTAATATGTACCAATTATGGGTTCGGAAAGCTGGCATCTGATTATGCGGCTGTCGTGGAGAACCAGCTACTTCTGAGGTCTGAGGAGTATGTGAATGTGGAAACATTATCTCCTTGGCTGCAAAGATTACTCAACCTATATGATCCAAACTCCAGTCAACCAGCAGGTTCTGCAGAAACACCTTCTAATTGCTTGGGTGGTGCTATTAGATCTGACTCCATTTGTAATAATGCATTCGTAGCTAACAATGCTGATGATGTTAACCTCACAAAAGGGCTCCCTTTTAATGGTGATAGGCAGGGAGATACTAAAAGATTCACTACTTCCGATGAGTTGGACATGCCTTTCTCGTTAGGCCTAAGGCAGGCTTCTTCTGACACTGTTCTTCCTCTTGAGGACACTTCAACATCATTCGCTGCATATTCCAATGCCAATCAAGAGAATCGGAATTACATTTCTGACATATCATCTGATTGTCAGGTTCAACAGCAACATCTTGGCCATGTTGGATGCTCTAAATTCGAAGGTCGTTTGGGGAGTAACCAGAATGCTCAATCGTTGGTTTGTCCATCTACAGAGGTAAACTTTTCAGTGTTTTCCTCCTCTAACTTGCTGATCCCTCAACATTTTCCAATGGATGTTCCTGAAGTCTCCAATATTCTTCCTGGCACAATCTGCAGCCAAGAGATCGCAACTCTTGAGGACATAGTGCAATCTTGTTCCCAGATGATAAAGTCTCAACATAACCGGAAACAATCCCTTCATCCATTAATGCGGCCTCAGGTTCCTCCAGTACAGTCACATGGTGCTCAACATTATGCTTCAGATGATCCCAGTGCGGGAAACATTGAAGGTATGCCACATTCGTCAAAAAGGTTGAAGATGGGTAACATAAATGGAAATAATCATCTATTGGTTCCTTCAATTGTTCAACATTGTGTTCCTGGAGGACTTTCATATCAACAGCAACAGTCTGAATCTCCTATATCCCTTAATTTTGAGGATATAGTGCAGTCTTGTTCTCAGATGATAAATTGTCAAAATAACAAAAAACGATGCCCTCATCCATTGAAGCAGCCTCAGGTTCCTCCAGAACGGTCACATGGTGCTCAACAGTATGCTTCAGATGGACCCAGTTCAGGAAACATCAAAGATATTCCGCCTTCAGTTGTTCAAAATTGTGTTCCTGAAGGACTTTCATATCTGCAGCAACAACCTAAATCTCCTGCATTTATTAGTTCTGAGGATATAGTGCAATCTTGCTCCCAGATGATAAAGTCTAAACATAACCGAAAATGGCCAGTTCATCCATATTTGCAGCCTCAGTTTCCTCCTGAACAGTCACATGGTGCTCAACAGTATGCTTCAGATGGATCCAGTTCAGGAAATATTGAAGATATCCCGCCTTCGTCAAAAAAGTTGAAAATGGAGAATAAAAATGAAAATTACCATCTATTGGCCCCTTCAGTTGTTCAACCTTGTGCTCCTGAAGGGCTTTCATATCTGCAGCAACAATCTGAATCTCCTGTATCTATTAATTCTGAAGTAACGCATGTGGAGATGGAACCAGCAAATAATTCCATACAAGATTCCATGAGGATCAATGATGTTACAAAATGTGATTCTGACATTATCCTTAAACTGAACTCTGAGAGTGTGCTGATTCCTTCTGGGGAAATATTTTCTTGTCATCATATGGAGCAAATAGACCTTACTAGCAGTAGTGAGATTATTGACAATGTGAAAGAAGTTTCTGAAAGAATGGGGTCCAAGAGTTCCCATTTTTTCTCAGAAGGGCTTACAGAGGAAACAGTGAGGACGGACTTCACCCAGACAGATCCAAAACCAGACTCTGATTTGAAGGAAGTAATAAAGCCTCAGAATCAAGAAACAAATAGTGTCCTTTTGACGGAACTATTAAAAGAAGAGCCAATCAAGGAGCATTTATCGAGTCTTGGGCAGAGCATTGATCAGAGTATCTTGATGGAAGAACGAGAAAACAGTGAGAAAGTGTGTCAATTGTGTGCGTCAGGAAAGCTTTTTTTTGCCCCTGCACCAGTGTTTTGCTCATGCTGTAATGCTCGTCTCAAGCACGGTGTTAACTATTACTGCACGCTGGATGAGCATAGTACACGATATTGTTTTTGTAACTCGTGCTATAAGGGGTCTCGAAGAGGAAATATCTCATTTCATAGTATCCGTATTTCAAAGGCAACACTTGGTAGAAAGAAGAACGATGAGGAAACTGAAGAAAGGTGGGTTCAATGTGATAAATGCAAGGGCTGGCAACATCAGATATGTGCTGTCTTGAATGATAATAGTGCTTTGGAAGGCAAAGTTGAGAACGCATGTCTCAAATGCTTGTTAAAAGAAACAGACTGTGGGGAGCTCATGAACTTACCAAAGAGTTATATTTTCAGTGCAAAAGATCTGCCAACTACCATGCTTAGCGACCATACAGAACAAAGACTCTTTAGGCGCCTCATGCGAGAGAGAGAAGAGAGAGCAAAGGTCCACGAAAAAGAGTTTTCTGAGGCTCCAGGAGCAGAAGATCTTGTTGTGAGAGAAGTTTTATCGGTTAAAAAAACACTAAAAGTGAAGCAGATGTTTTTGGATCTCTTTCATGATGAGAATTACCCTGCTGAATTCCCATACAAATCAAAGGTTATTCTTGTTTCAGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04024 ko04066 ko04068 ko04110 ko04310 ko04330 ko04350 ko04520 ko04630 ko04720 ko04916 ko04919 ko04922 ko05016 ko05152 ko05161 ko05164 ko05165 ko05166 ko05167 ko05168 ko05169 ko05200 ko05203 ko05206 ko05211 ko05215 map04024 map04066 map04068 map04110 map04310 map04330 map04350 map04520 map04630 map04720 map04916 map04919 map04922 map05016 map05152 map05161 map05164 map05165 map05166 map05167 map05168 map05169 map05200 map05203 map05206 map05211 map05215

Pfam Domains

Protein Families

HAT_KAT11 PHD ZZ zf-TAZ

Protein Analysis

970

Amino Acids

108.41

Weight (kDa)

5.83

Isoelectric Point (pI)

60.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009704)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g45470 FvH4_6g45470 FvH4_6g45470 FvH4_6g45470
malus_domestica	MD09G1082700.v1.1 MD09G1082800.v1.1 MD17G1073200.v1.1
prunus_persica	Prupe.3G240900_v2.0.a1 Prupe.3G240900_v2.0.a1
pyrus_communis	pycom09g00920 pycom17g07410
rosa_chinensis	RchiOBHm_Chr2g0163411
rosa_laevigata	RLG00000021391
rosa_multiflora	Rmu_ssc0000231.1_g000004
rosa_roxburghii	Rroxscaffold_2G00087360
rosa_rugosa	Rorug02G0502300 Rorug02G0502400
rosa_samantha	Rh2AG569400 Rh2BG581500 Rh2CG551300 Rh2DG591400
rosa_wichuraiana	Rw2G047120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	12
Acc36I	ACCTGC	1 cut(s)	377
AccB1I	GGYRCC	1 cut(s)	2700
AccB7I	CCANNNNNTGG	1 cut(s)	1678
AccI	GTMKAC	1 cut(s)	147
AciI	CCGC	6 cut(s)	184, 269, 997, 1061, 1382, 1625
AclWI	GGATC	8 cut(s)	359, 832, 1046, 1590, 1603, 1829, 2054, 2844
AcoI	YGGCCR	3 cut(s)	61, 721, 1520
AcsI	RAATTY	2 cut(s)	740, 2867
AcyI	GRCGYC	1 cut(s)	2701
AdeI	CACNNNGTG	3 cut(s)	1028, 1328, 1571
AfaI	GTAC	4 cut(s)	33, 232, 1017, 2353
AfiI	CCNNNNNNNGG	7 cut(s)	240, 509, 586, 1061, 1361, 1678, 2131
AjnI	CCWGG	4 cut(s)	100, 886, 1165, 2761
AjuI	GAANNNNNNNTTGG	2 cut(s)	227, 259
AluBI	AGCT	6 cut(s)	85, 253, 289, 464, 2260, 2611
AluI	AGCT	6 cut(s)	85, 253, 289, 464, 2260, 2611
Alw21I	GWGCWC	5 cut(s)	1033, 1333, 1576, 1708, 2613
Alw26I	GTCTC	5 cut(s)	877, 963, 2312, 2394, 2579
AlwI	GGATC	8 cut(s)	359, 832, 1046, 1590, 1603, 1829, 2054, 2844
AlwNI	CAGNNNCTG	2 cut(s)	392, 2075
AoxI	GGCC	6 cut(s)	61, 577, 721, 998, 1520, 1680
ApeKI	GCWGC	7 cut(s)	340, 638, 900, 1297, 1429, 1540, 1729
ApoI	RAATTY	2 cut(s)	740, 2867
AseI	ATTAAT	2 cut(s)	992, 1758
AspLEI	GCGC	2 cut(s)	165, 2703
AspS9I	GGNCC	5 cut(s)	170, 1352, 1681, 1989, 2734
AsuC2I	CCSGG	2 cut(s)	80, 140
AsuHPI	GGTGA	2 cut(s)	524, 2041
AsuII	TTCGAA	1 cut(s)	744
AvaII	GGWCC	4 cut(s)	170, 1352, 1989, 2734
AxyI	CCTNAGG	3 cut(s)	581, 1002, 1302
BalI	TGGCCA	3 cut(s)	63, 723, 1522
BamHI	GGATCC	1 cut(s)	1595
BanI	GGYRCC	1 cut(s)	2700
BanII	GRGCYC	2 cut(s)	501, 2613
BauI	CACGAG	1 cut(s)	2374
Bbv12I	GWGCWC	5 cut(s)	1033, 1333, 1576, 1708, 2613
BbvI	GCAGC	7 cut(s)	327, 625, 912, 1309, 1441, 1552, 1741
BccI	CCATC	9 cut(s)	19, 104, 799, 1099, 1343, 1586, 1680, 1777, 2200
BciT130I	CCWGG	4 cut(s)	102, 888, 1167, 2763
BciVI	GTATCC	1 cut(s)	2429
BclI	TGATCA	1 cut(s)	2191
BcnI	CCSGG	2 cut(s)	80, 140
BcoDI	GTCTC	5 cut(s)	877, 963, 2312, 2394, 2579
BfaI	CTAG	1 cut(s)	1938
BfmI	CTRYAG	5 cut(s)	393, 795, 898, 1427, 1727
BfoI	RGCGCY	1 cut(s)	2704
BfuAI	ACCTGC	1 cut(s)	377
BfuI	GTATCC	1 cut(s)	2429
BglII	AGATCT	3 cut(s)	431, 2650, 2773
BisI	GCNGC	9 cut(s)	270, 341, 639, 901, 998, 1298, 1430, 1541, 1730
BlpI	GCTNAGC	1 cut(s)	2669
BlsI	GCNGC	9 cut(s)	271, 342, 640, 902, 999, 1299, 1431, 1542, 1731
Bme1390I	CCNGG	6 cut(s)	80, 102, 140, 888, 1167, 2763
Bme18I	GGWCC	4 cut(s)	170, 1352, 1989, 2734
BmgT120I	GGNCC	5 cut(s)	170, 1352, 1681, 1989, 2734
BmrFI	CCNGG	6 cut(s)	80, 102, 140, 888, 1167, 2763
BmrI	ACTGGG	2 cut(s)	1050, 1350
BmsI	GCATC	3 cut(s)	266, 722, 1268
BmuI	ACTGGG	2 cut(s)	1050, 1350
BpmI	CTGGAG	5 cut(s)	358, 996, 1188, 1296, 2745
Bpu1102I	GCTNAGC	1 cut(s)	2669
Bpu14I	TTCGAA	1 cut(s)	744
BpuEI	CTTGAG	4 cut(s)	172, 635, 941, 2294
BpuMI	CCSGG	2 cut(s)	80, 140
BsaHI	GRCGYC	1 cut(s)	2701
BsaI	GGTCTC	1 cut(s)	2394
BsaJI	CCNNGG	2 cut(s)	58, 335
BsaWI	WCCGGW	1 cut(s)	969
BsaXI	ACNNNNNCTCC	2 cut(s)	316, 346
Bsc4I	CCNNNNNNNGG	7 cut(s)	240, 509, 586, 1061, 1361, 1678, 2131
Bse1I	ACTGG	7 cut(s)	375, 1013, 1056, 1356, 1523, 1599, 2279
Bse21I	CCTNAGG	3 cut(s)	581, 1002, 1302
BseBI	CCWGG	4 cut(s)	102, 888, 1167, 2763
BseDI	CCNNGG	2 cut(s)	58, 335
BseGI	GGATG	8 cut(s)	34, 115, 737, 865, 985, 1285, 1528, 2347
BseLI	CCNNNNNNNGG	7 cut(s)	240, 509, 586, 1061, 1361, 1678, 2131
BseNI	ACTGG	7 cut(s)	375, 1013, 1056, 1356, 1523, 1599, 2279
BseRI	GAGGAG	2 cut(s)	320, 814
BseXI	GCAGC	7 cut(s)	327, 625, 912, 1309, 1441, 1552, 1741
BsgI	GTGCAG	3 cut(s)	1253, 2259, 2317
BshFI	GGCC	6 cut(s)	63, 579, 723, 1000, 1522, 1682
BshNI	GGYRCC	1 cut(s)	2700
BsiHKAI	GWGCWC	5 cut(s)	1033, 1333, 1576, 1708, 2613
BsiSI	CCGG	3 cut(s)	80, 140, 970
BslI	CCNNNNNNNGG	7 cut(s)	240, 509, 586, 1061, 1361, 1678, 2131
BsmAI	GTCTC	5 cut(s)	877, 963, 2312, 2394, 2579
BsmBI	CGTCTC	1 cut(s)	2312
BsmI	GAATGC	2 cut(s)	455, 775
BsnI	GGCC	6 cut(s)	63, 579, 723, 1000, 1522, 1682
Bso31I	GGTCTC	1 cut(s)	2394
Bsp119I	TTCGAA	1 cut(s)	744
Bsp1286I	GDGCHC	6 cut(s)	501, 1033, 1333, 1576, 1708, 2613
Bsp1407I	TGTACA	1 cut(s)	31
Bsp1720I	GCTNAGC	1 cut(s)	2669
BspACI	CCGC	6 cut(s)	184, 269, 997, 1061, 1382, 1625
BspANI	GGCC	6 cut(s)	63, 579, 723, 1000, 1522, 1682
BspHI	TCATGA	2 cut(s)	2613, 2845
BspMAI	CTGCAG	4 cut(s)	397, 902, 1431, 1731
BspMI	ACCTGC	1 cut(s)	377
BspPI	GGATC	8 cut(s)	359, 832, 1046, 1590, 1603, 1829, 2054, 2844
BspQI	GCTCTTC	1 cut(s)	2142
BspT104I	TTCGAA	1 cut(s)	744
BspT107I	GGYRCC	1 cut(s)	2700
BspTNI	GGTCTC	1 cut(s)	2394
BsrGI	TGTACA	1 cut(s)	31
BsrI	ACTGG	7 cut(s)	375, 1013, 1056, 1356, 1523, 1599, 2279
BssECI	CCNNGG	2 cut(s)	58, 335
BssNI	GRCGYC	1 cut(s)	2701
BssSI	CACGAG	1 cut(s)	2374
BssT1I	CCWWGG	2 cut(s)	58, 335
Bst2BI	CACGAG	1 cut(s)	2374
Bst2UI	CCWGG	4 cut(s)	102, 888, 1167, 2763
Bst6I	CTCTTC	3 cut(s)	2142, 2389, 2715
BstACI	GRCGYC	1 cut(s)	2701
BstAPI	GCANNNNNTGC	2 cut(s)	392, 897
BstAUI	TGTACA	1 cut(s)	31
BstBI	TTCGAA	1 cut(s)	744
BstC8I	GCNNGC	4 cut(s)	255, 588, 2336, 2507
BstENI	CCTNNNNNAGG	1 cut(s)	584
BstF5I	GGATG	8 cut(s)	34, 115, 737, 865, 985, 1285, 1528, 2347
BstH2I	RGCGCY	1 cut(s)	2704
BstHHI	GCGC	2 cut(s)	165, 2703
BstMAI	GTCTC	5 cut(s)	877, 963, 2312, 2394, 2579
BstMWI	GCNNNNNNNGC	7 cut(s)	392, 461, 470, 897, 2344, 2707, 2765
BstNI	CCWGG	4 cut(s)	102, 888, 1167, 2763
BstNSI	RCATGY	3 cut(s)	565, 1778, 2574
BstSCI	CCNGG	6 cut(s)	78, 100, 138, 886, 1165, 2761
BstSFI	CTRYAG	5 cut(s)	393, 795, 898, 1427, 1727
BstV1I	GCAGC	7 cut(s)	327, 625, 912, 1309, 1441, 1552, 1741
BstX2I	RGATCY	6 cut(s)	431, 1595, 2059, 2650, 2773, 2836
BstYI	RGATCY	6 cut(s)	431, 1595, 2059, 2650, 2773, 2836
Bsu36I	CCTNAGG	3 cut(s)	581, 1002, 1302
BsuI	GTATCC	1 cut(s)	2429
BsuRI	GGCC	6 cut(s)	63, 579, 723, 1000, 1522, 1682
BtsCI	GGATG	8 cut(s)	34, 115, 737, 865, 985, 1285, 1528, 2347
BtsIMutI	CAGTG	7 cut(s)	600, 819, 1063, 2040, 2230, 2286, 2647
BveI	ACCTGC	1 cut(s)	377
Cac8I	GCNNGC	4 cut(s)	255, 588, 2336, 2507
CaiI	CAGNNNCTG	2 cut(s)	392, 2075
CciI	TCATGA	2 cut(s)	2613, 2845
CfoI	GCGC	2 cut(s)	165, 2703
Cfr13I	GGNCC	5 cut(s)	170, 1352, 1681, 1989, 2734
CseI	GACGC	1 cut(s)	2238
Csp6I	GTAC	4 cut(s)	32, 231, 1016, 2352
CviQI	GTAC	4 cut(s)	32, 231, 1016, 2352
DinI	GGCGCC	1 cut(s)	2702
DraIII	CACNNNGTG	3 cut(s)	1028, 1328, 1571
EaeI	YGGCCR	3 cut(s)	61, 721, 1520
Eam1104I	CTCTTC	3 cut(s)	2142, 2389, 2715
EarI	CTCTTC	3 cut(s)	2142, 2389, 2715
EciI	GGCGGA	1 cut(s)	1371
Ecl136II	GAGCTC	1 cut(s)	2611
Eco130I	CCWWGG	2 cut(s)	58, 335
Eco147I	AGGCCT	1 cut(s)	579
Eco24I	GRGCYC	2 cut(s)	501, 2613
Eco31I	GGTCTC	1 cut(s)	2394
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	4 cut(s)	170, 1352, 1989, 2734
Eco53kI	GAGCTC	1 cut(s)	2611
Eco81I	CCTNAGG	3 cut(s)	581, 1002, 1302
EcoICRI	GAGCTC	1 cut(s)	2611
EcoNI	CCTNNNNNAGG	1 cut(s)	584
EcoO109I	RGGNCCY	1 cut(s)	170
EcoRI	GAATTC	1 cut(s)	2867
EcoRII	CCWGG	4 cut(s)	100, 886, 1165, 2761
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	2 cut(s)	58, 335
EcoT22I	ATGCAT	1 cut(s)	457
EcoT38I	GRGCYC	2 cut(s)	501, 2613
EgeI	GGCGCC	1 cut(s)	2702
EheI	GGCGCC	1 cut(s)	2702
ErhI	CCWWGG	2 cut(s)	58, 335
Esp3I	CGTCTC	1 cut(s)	2312
FalI	AAGNNNNNCTT	2 cut(s)	574, 606
FauI	CCCGC	2 cut(s)	1054, 1632
FauNDI	CATATG	1 cut(s)	1917
FbaI	TGATCA	1 cut(s)	2191
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	9 cut(s)	270, 341, 639, 901, 998, 1298, 1430, 1541, 1730
FokI	GGATG	8 cut(s)	41, 122, 744, 872, 972, 1272, 1515, 2354
FriOI	GRGCYC	2 cut(s)	501, 2613
Fsp4HI	GCNGC	9 cut(s)	270, 341, 639, 901, 998, 1298, 1430, 1541, 1730
FspBI	CTAG	1 cut(s)	1938
GlaI	GCGC	2 cut(s)	164, 2702
GluI	GCNGC	9 cut(s)	270, 341, 639, 901, 998, 1298, 1430, 1541, 1730
GsuI	CTGGAG	5 cut(s)	358, 996, 1188, 1296, 2745
HaeII	RGCGCY	1 cut(s)	2704
HaeIII	GGCC	6 cut(s)	63, 579, 723, 1000, 1522, 1682
HapII	CCGG	3 cut(s)	80, 140, 970
HgaI	GACGC	1 cut(s)	2238
HhaI	GCGC	2 cut(s)	165, 2703
Hin1I	GRCGYC	1 cut(s)	2701
Hin6I	GCGC	2 cut(s)	163, 2701
HinP1I	GCGC	2 cut(s)	163, 2701
HincII	GTYRAC	3 cut(s)	380, 484, 2323
HindII	GTYRAC	3 cut(s)	380, 484, 2323
HindIII	AAGCTT	1 cut(s)	2258
HpaI	GTTAAC	2 cut(s)	484, 2323
HpaII	CCGG	3 cut(s)	80, 140, 970
HphI	GGTGA	2 cut(s)	524, 2041
Hpy166II	GTNNAC	8 cut(s)	116, 148, 380, 484, 805, 2323, 2354, 2737
Hpy8I	GTNNAC	8 cut(s)	116, 148, 380, 484, 805, 2323, 2354, 2737
Hpy99I	CGWCG	1 cut(s)	123
HpyCH4IV	ACGT	1 cut(s)	118
HpyF10VI	GCNNNNNNNGC	7 cut(s)	392, 461, 470, 897, 2344, 2707, 2765
HpySE526I	ACGT	1 cut(s)	118
Hsp92I	GRCGYC	1 cut(s)	2701
HspAI	GCGC	2 cut(s)	163, 2701
KasI	GGCGCC	1 cut(s)	2700
Ksp22I	TGATCA	1 cut(s)	2191
KspAI	GTTAAC	2 cut(s)	484, 2323
LguI	GCTCTTC	1 cut(s)	2142
LmnI	GCTCC	9 cut(s)	82, 504, 1490, 1711, 1921, 2161, 2608, 2764, 2765
Lsp1109I	GCAGC	7 cut(s)	327, 625, 912, 1309, 1441, 1552, 1741
LweI	GCATC	3 cut(s)	266, 722, 1268
MaeI	CTAG	1 cut(s)	1938
MaeII	ACGT	1 cut(s)	118
MaeIII	GTNAC	8 cut(s)	761, 1020, 1109, 1320, 1563, 1768, 1831, 2369
MfeI	CAATTG	2 cut(s)	1146, 2240
MflI	RGATCY	6 cut(s)	431, 1595, 2059, 2650, 2773, 2836
MhlI	GDGCHC	6 cut(s)	501, 1033, 1333, 1576, 1708, 2613
MlsI	TGGCCA	3 cut(s)	63, 723, 1522
MluNI	TGGCCA	3 cut(s)	63, 723, 1522
Mly113I	GGCGCC	1 cut(s)	2701
MlyI	GAGTC	4 cut(s)	431, 2066, 2182, 2685
MmeI	TCCRAC	2 cut(s)	537, 709
Mox20I	TGGCCA	3 cut(s)	63, 723, 1522
Mph1103I	ATGCAT	1 cut(s)	457
MscI	TGGCCA	3 cut(s)	63, 723, 1522
Msp20I	TGGCCA	3 cut(s)	63, 723, 1522
MspI	CCGG	3 cut(s)	80, 140, 970
MspR9I	CCNGG	6 cut(s)	80, 102, 140, 888, 1167, 2763
MunI	CAATTG	2 cut(s)	1146, 2240
Mva1269I	GAATGC	2 cut(s)	455, 775
MvaI	CCWGG	4 cut(s)	102, 888, 1167, 2763
MwoI	GCNNNNNNNGC	7 cut(s)	392, 461, 470, 897, 2344, 2707, 2765
NarI	GGCGCC	1 cut(s)	2701
NciI	CCSGG	2 cut(s)	80, 140
NdeI	CATATG	1 cut(s)	1917
NmuCI	GTSAC	3 cut(s)	1020, 1320, 1563
NsiI	ATGCAT	1 cut(s)	457
NspI	RCATGY	3 cut(s)	565, 1778, 2574
NspV	TTCGAA	1 cut(s)	744
PagI	TCATGA	2 cut(s)	2613, 2845
PceI	AGGCCT	1 cut(s)	579
PciSI	GCTCTTC	1 cut(s)	2142
PctI	GAATGC	2 cut(s)	455, 775
PfeI	GAWTC	9 cut(s)	88, 537, 664, 1199, 1742, 1811, 1844, 1885, 2104
PflMI	CCANNNNNTGG	1 cut(s)	1678
PfoI	TCCNGGA	2 cut(s)	1165, 2761
PkrI	GCNGC	9 cut(s)	271, 342, 640, 902, 999, 1299, 1431, 1542, 1731
PleI	GAGTC	4 cut(s)	431, 2066, 2181, 2685
PluTI	GGCGCC	1 cut(s)	2704
PpsI	GAGTC	4 cut(s)	431, 2066, 2181, 2685
PpuMI	RGGWCCY	1 cut(s)	170
PshBI	ATTAAT	2 cut(s)	992, 1758
PsiI	TTATAA	1 cut(s)	12
Psp124BI	GAGCTC	1 cut(s)	2613
Psp5II	RGGWCCY	1 cut(s)	170
Psp6I	CCWGG	4 cut(s)	100, 886, 1165, 2761
PspGI	CCWGG	4 cut(s)	100, 886, 1165, 2761
PspPI	GGNCC	5 cut(s)	170, 1352, 1681, 1989, 2734
PspPPI	RGGWCCY	1 cut(s)	170
PstI	CTGCAG	4 cut(s)	397, 902, 1431, 1731
PstNI	CAGNNNCTG	2 cut(s)	392, 2075
PsuI	RGATCY	6 cut(s)	431, 1595, 2059, 2650, 2773, 2836
RsaI	GTAC	4 cut(s)	33, 232, 1017, 2353
RsaNI	GTAC	4 cut(s)	32, 231, 1016, 2352
SacI	GAGCTC	1 cut(s)	2613
SapI	GCTCTTC	1 cut(s)	2142
SatI	GCNGC	9 cut(s)	270, 341, 639, 901, 998, 1298, 1430, 1541, 1730
Sau96I	GGNCC	5 cut(s)	170, 1352, 1681, 1989, 2734
SchI	GAGTC	4 cut(s)	431, 2066, 2182, 2685
ScrFI	CCNGG	6 cut(s)	80, 102, 140, 888, 1167, 2763
SduI	GDGCHC	6 cut(s)	501, 1033, 1333, 1576, 1708, 2613
SfaNI	GCATC	3 cut(s)	266, 722, 1268
SfcI	CTRYAG	5 cut(s)	393, 795, 898, 1427, 1727
SfoI	GGCGCC	1 cut(s)	2702
SfuI	TTCGAA	1 cut(s)	744
SinI	GGWCC	4 cut(s)	170, 1352, 1989, 2734
SmlI	CTYRAG	4 cut(s)	151, 614, 920, 2309
SmoI	CTYRAG	4 cut(s)	151, 614, 920, 2309
SseBI	AGGCCT	1 cut(s)	579
SsiI	CCGC	6 cut(s)	184, 269, 997, 1061, 1382, 1625
SspDI	GGCGCC	1 cut(s)	2700
SspI	AATATT	3 cut(s)	880, 1612, 1902
SspMI	CTAG	1 cut(s)	1938
SstI	GAGCTC	1 cut(s)	2613
StuI	AGGCCT	1 cut(s)	579
StyD4I	CCNGG	6 cut(s)	78, 100, 138, 886, 1165, 2761
StyI	CCWWGG	2 cut(s)	58, 335
TaiI	ACGT	1 cut(s)	121
TaqI	TCGA	3 cut(s)	744, 2171, 2392
TatI	WGTACW	3 cut(s)	31, 1015, 2351
TauI	GCSGC	2 cut(s)	272, 1000
TfiI	GAWTC	9 cut(s)	88, 537, 664, 1199, 1742, 1811, 1844, 1885, 2104
TscAI	CASTG	7 cut(s)	607, 819, 1063, 2040, 2230, 2286, 2647
TseFI	GTSAC	3 cut(s)	1020, 1320, 1563
TseI	GCWGC	7 cut(s)	340, 638, 900, 1297, 1429, 1540, 1729
Tsp45I	GTSAC	3 cut(s)	1020, 1320, 1563
TspGWI	ACGGA	3 cut(s)	2057, 2147, 2411
TspRI	CASTG	7 cut(s)	607, 819, 1063, 2040, 2230, 2286, 2647
Van91I	CCANNNNNTGG	1 cut(s)	1678
VpaK11BI	GGWCC	4 cut(s)	170, 1352, 1989, 2734
VspI	ATTAAT	2 cut(s)	992, 1758
XagI	CCTNNNNNAGG	1 cut(s)	584
XapI	RAATTY	2 cut(s)	740, 2867
XceI	RCATGY	3 cut(s)	565, 1778, 2574
XmiI	GTMKAC	1 cut(s)	147
XspI	CTAG	1 cut(s)	1938
Zsp2I	ATGCAT	1 cut(s)	457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.