MD09G1126200.v1.1

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0007860
Physical Location & Seq
Reverse (-)
9752261 .. 9755572
3312 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1126200.v1.1.491

Sequence Viewer

Length: 2073 bp
ATGGCGATGAAGCCCTCGAACATGTGGCTTCGGCGCCAACAGTGCCCATGTGGAGACTGGAAGTGTTACATTAAGTATGAAGGAGATGATTTGACATCAGTAAGCTCTCAGCATGTGAAGAGTGAAATAGCTCAGTCTTCGTCATCATCAGAAGCTGTCTTCACTCCATATGTTGGTCAAATTTTCAAAACTGATGATGATGCTTTTGAATACTACAGCAACTTTGCCAGGAAGAATGGGTTTTCAATTAGGAAAGCGCGCTCGACAGAAAGCCAAAACTTAGGAGTATATAGACGAGATTTTGTTTGTTACCGGTCTGGATTTAATCAACCGAGAAAAAAGGCCAATGTGGAACATCCTAGGGAGCGAAAATCAGTACGATGTGGATGCGATGCAAAGTTGTATTTGACAAAGGAAATTGTTGATGGTTTTTCGCAATGGTATGTTTCACAGTTTAGCAACGTTCATAATCATGAGTTATTGGAAGATGACCAAGTGCGCTTACTTCCTGCATATCGTAAAATACAAGAGGCTGATCAAGAACGAATTCTTTTACTCTCCAAAGCTGGGTTTCCTGTAAACCGGATAGTAAAAGTGTTGGAGCTAGAAAAGGGGGTTCAACCTGGACAGTTGCCCTTCATAGAGAAAGATGTTAGAAATTTTGTTAGGACTTGTAAGAAGACTGTTCAAGAAAATGATGCTCTGCTCAATGAGAAAAGAGAGAATGATATGCTCGAACTTCTTGAGGCCTGCAAGGCTATGACTGAGAGGGATCCAGATTTTGTCTATGATTATTCTGTAGATGAAAATGAAAAGGTTGAAAATATCACATGGTCATTTGGCGATTCCATTCGCGCATACAATGTTTTTGGTGATGTAGTTGCTTTTGACACTACGTATCGTTCAGTCACTTATGGATTGCTCCTTGGAGTATGGTTTGGTATCGATAATCATGGCAAGGCAATTTTCTTAGGATGTGTGCTACTACAAGATGAAAGTTCTCATGCATTTGCTTGGGCTTTACAGGCTTTTATGCGATTTATGAGAGGAAGACATCCACAGACTATTCTTACCGATATAGACTCGGGGCTCAGAGATGCTATAGCAAGCGAATTGCCAAATTCAAAACATGTAATATGTATATGGCATATTTTATCCAAAATATCCAGTTGGTTCTCTTTGCCCATTGGATCACAGTATGCAAACTTTAAAGCCGAGTTTGATATGCTTTCTCATCTGGAGAATGTTGAAGATTTCGAGCATCAATGGAACATTTTGGTTGCTCGGTTTGGCCTTGTATCTGATAAACATGTAGCTTTGTTGTATTCTTACCGAGCATCCTGGGCATTTTCTTACATTAGAAGTTACTTTCTCGCTCGTACACTGACAGCGGAGTTTTCATCGTCTTTGGAGTCATTCTTGAAACGAATTTTGAATGGACAGACATGTCTGCAAGTATTCTTTGAGCAGGTTAGTATTGCTGCCAACTTTGAGAACCAGACCAGAGAAGGGATGCAATATATGCATGTCAAGACCGGCATGCCTCTTGAAGAACACGCACGGAATATTCTTACACCTTATGCTTTCAATGTCTTACAACGCGAAATTGTTCTGTCTGAGCAATATGCAGCAACAGACTTGGGGAATGGATCCTTTCTTCTGAGACACTACAAGAAATTGGATGGAGAGTGCCTTGTCATTTGGATGGATGATGAGCAGATTCACTGCTCCTGCAAGGAATTTGAGCATTCTGGGATTTTATGCAGGCATTCCCTTCGCGTACTAGTAATGAAGAATTACTTTCAACTCCCTGAAAAATATTTTCTGCTCCGTTGGCGGCTAGAAAGTTCCCTGGTTTCTTTGGATGATCAAAATGCTCAAATCAGCAGCGATGAGTGTGCTCGGGCCTTCCACGGGCTTGCTGATACCCTGTTGACAGAGTCATTGATCTCCAAGGACAGGTTTAATTACGTTCATAGCGAACTTACGAGTCTTCTCGAGCATGTTAGGAAGATGCCGGTGATTGACGAATGTGCTGCGATTGCTGCAGCTACTAACATCAGCGAATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

691

Amino Acids

79.59

Weight (kDa)

5.94

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 70 - 161 2.7e-24 FAR1 DNA-binding domain
HTH_FAR1 PF26175 174 - 228 2.1e-26 FAR1 HTH-like domain
ZSWIM1-3_RNaseH-like PF21056 256 - 376 6.3e-10 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 293 - 386 3.6e-22 MULE transposase domain
SWIM PF04434 569 - 598 8.5e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1446
Acc36I ACCTGC 1 cut(s) 1459
AccB1I GGYRCC 1 cut(s) 33
AccB7I CCANNNNNTGG 1 cut(s) 173
AccII CGCG 4 cut(s) 259, 855, 1602, 1779
AciI CCGC 2 cut(s) 1391, 1837
AclI AACGTT 1 cut(s) 462
AclWI GGATC 5 cut(s) 767, 780, 1198, 1644, 1657
AcsI RAATTY 6 cut(s) 180, 546, 658, 1120, 1428, 1739
AcyI GRCGYC 1 cut(s) 34
AfaI GTAC 3 cut(s) 378, 1381, 1782
AfiI CCNNNNNNNGG 5 cut(s) 173, 567, 1509, 1914, 1959
AflIII ACRYGT 4 cut(s) 21, 1129, 1309, 1445
AgeI ACCGGT 1 cut(s) 312
AhlI ACTAGT 1 cut(s) 1783
AjnI CCWGG 4 cut(s) 227, 622, 1340, 1851
AluBI AGCT 7 cut(s) 105, 131, 155, 566, 604, 1316, 2051
AluI AGCT 7 cut(s) 105, 131, 155, 566, 604, 1316, 2051
Alw21I GWGCWC 1 cut(s) 1903
Alw26I GTCTC 2 cut(s) 48, 1657
AlwI GGATC 5 cut(s) 767, 780, 1198, 1644, 1657
AlwNI CAGNNNCTG 1 cut(s) 155
Ama87I CYCGRG 3 cut(s) 1084, 1902, 1997
AoxI GGCC 4 cut(s) 342, 747, 1291, 1905
ApeKI GCWGC 6 cut(s) 1481, 1628, 1887, 2036, 2045, 2048
ApoI RAATTY 6 cut(s) 180, 546, 658, 1120, 1428, 1739
AsiGI ACCGGT 1 cut(s) 312
Asp700I GAANNNNTTC 2 cut(s) 546, 1608
AspA2I CCTAGG 1 cut(s) 359
AspLEI GCGC 5 cut(s) 36, 259, 261, 501, 857
AspS9I GGNCC 1 cut(s) 1905
AsuHPI GGTGA 2 cut(s) 884, 2032
AvaI CYCGRG 3 cut(s) 1084, 1902, 1997
AvrII CCTAGG 1 cut(s) 359
BaeGI GKGCMC 1 cut(s) 47
BamHI GGATCC 2 cut(s) 772, 1649
BanI GGYRCC 1 cut(s) 33
BanII GRGCYC 1 cut(s) 1092
BbsI GAAGAC 5 cut(s) 129, 151, 686, 1057, 1985
Bbv12I GWGCWC 1 cut(s) 1903
BbvI GCAGC 6 cut(s) 1468, 1640, 1899, 2023, 2032, 2060
BccI CCATC 3 cut(s) 419, 1676, 1699
BcgI CGANNNNNNTGC 8 cut(s) 369, 403, 1757, 1791, 1880, 1914, 2018, 2052
BciT130I CCWGG 4 cut(s) 229, 624, 1342, 1853
BclI TGATCA 2 cut(s) 535, 1867
BcoDI GTCTC 2 cut(s) 48, 1657
BcuI ACTAGT 1 cut(s) 1783
BfaI CTAG 4 cut(s) 360, 605, 1784, 1841
BfmI CTRYAG 4 cut(s) 214, 798, 1101, 2046
BfoI RGCGCY 1 cut(s) 37
BfuAI ACCTGC 1 cut(s) 1459
BglI GCCNNNNNGGC 1 cut(s) 755
BisI GCNGC 7 cut(s) 1482, 1629, 1838, 1888, 2037, 2046, 2049
BlnI CCTAGG 1 cut(s) 359
BlsI GCNGC 7 cut(s) 1483, 1630, 1839, 1889, 2038, 2047, 2050
Bme1390I CCNGG 4 cut(s) 229, 624, 1342, 1853
BmeT110I CYCGRG 3 cut(s) 1084, 1902, 1997
BmgT120I GGNCC 1 cut(s) 1905
BmiI GGNNCC 3 cut(s) 35, 774, 1651
BmrFI CCNGG 4 cut(s) 229, 624, 1342, 1853
BmsI GCATC 9 cut(s) 190, 377, 382, 688, 1087, 1270, 1346, 1503, 2004
BpiI GAAGAC 5 cut(s) 129, 151, 686, 1057, 1985
BpmI CTGGAG 1 cut(s) 1259
BpuEI CTTGAG 1 cut(s) 764
Bsa29I ATCGAT 1 cut(s) 945
BsaAI YACGTR 1 cut(s) 897
BsaHI GRCGYC 1 cut(s) 34
BsaJI CCNNGG 6 cut(s) 359, 925, 1341, 1851, 1912, 1953
BsaWI WCCGGW 2 cut(s) 312, 582
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 567, 1509, 1914, 1959
Bse118I RCCGGY 3 cut(s) 312, 1535, 2017
Bse1I ACTGG 2 cut(s) 62, 1167
Bse3DI GCAATG 1 cut(s) 443
BseBI CCWGG 4 cut(s) 229, 624, 1342, 1853
BseCI ATCGAT 1 cut(s) 945
BseDI CCNNGG 6 cut(s) 359, 925, 1341, 1851, 1912, 1953
BseLI CCNNNNNNNGG 5 cut(s) 173, 567, 1509, 1914, 1959
BseMI GCAATG 1 cut(s) 443
BseMII CTCAG 6 cut(s) 122, 146, 756, 1105, 1608, 1652
BseNI ACTGG 2 cut(s) 62, 1167
BsePI GCGCGC 1 cut(s) 257
BseSI GKGCMC 1 cut(s) 47
BseXI GCAGC 6 cut(s) 1468, 1640, 1899, 2023, 2032, 2060
BseYI CCCAGC 1 cut(s) 566
Bsh1236I CGCG 4 cut(s) 259, 855, 1602, 1779
BshFI GGCC 4 cut(s) 344, 749, 1293, 1907
BshNI GGYRCC 1 cut(s) 33
BshTI ACCGGT 1 cut(s) 312
BshVI ATCGAT 1 cut(s) 945
BsiHKAI GWGCWC 1 cut(s) 1903
BsiHKCI CYCGRG 3 cut(s) 1084, 1902, 1997
BsiSI CCGG 4 cut(s) 313, 583, 1536, 2018
BslI CCNNNNNNNGG 5 cut(s) 173, 567, 1509, 1914, 1959
BsmAI GTCTC 2 cut(s) 48, 1657
BsmI GAATGC 2 cut(s) 1747, 1768
BsnI GGCC 4 cut(s) 344, 749, 1293, 1907
BsoBI CYCGRG 3 cut(s) 1084, 1902, 1997
Bsp1286I GDGCHC 3 cut(s) 47, 1092, 1903
Bsp143I GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
BspACI CCGC 2 cut(s) 1391, 1837
BspANI GGCC 4 cut(s) 344, 749, 1293, 1907
BspCNI CTCAG 6 cut(s) 121, 145, 757, 1104, 1609, 1653
BspDI ATCGAT 1 cut(s) 945
BspFNI CGCG 4 cut(s) 259, 855, 1602, 1779
BspHI TCATGA 1 cut(s) 472
BspLI GGNNCC 3 cut(s) 35, 774, 1651
BspMAI CTGCAG 1 cut(s) 2050
BspMI ACCTGC 1 cut(s) 1459
BspPI GGATC 5 cut(s) 767, 780, 1198, 1644, 1657
BspT107I GGYRCC 1 cut(s) 33
BsrDI GCAATG 1 cut(s) 443
BsrFI RCCGGY 3 cut(s) 312, 1535, 2017
BsrI ACTGG 2 cut(s) 62, 1167
BssAI RCCGGY 3 cut(s) 312, 1535, 2017
BssECI CCNNGG 6 cut(s) 359, 925, 1341, 1851, 1912, 1953
BssHII GCGCGC 1 cut(s) 257
BssMI GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
BssNI GRCGYC 1 cut(s) 34
BssT1I CCWWGG 3 cut(s) 359, 925, 1953
Bst2UI CCWGG 4 cut(s) 229, 624, 1342, 1853
Bst4CI ACNGT 5 cut(s) 42, 453, 630, 685, 1197
Bst6I CTCTTC 1 cut(s) 113
BstACI GRCGYC 1 cut(s) 34
BstAPI GCANNNNNTGC 1 cut(s) 1522
BstBAI YACGTR 1 cut(s) 897
BstC8I GCNNGC 6 cut(s) 259, 751, 1108, 1541, 1766, 1920
BstDEI CTNAG 9 cut(s) 108, 132, 280, 765, 970, 1091, 1617, 1661, 2070
BstDSI CCRYGG 1 cut(s) 1912
BstFNI CGCG 4 cut(s) 259, 855, 1602, 1779
BstH2I RGCGCY 1 cut(s) 37
BstHHI GCGC 5 cut(s) 36, 259, 261, 501, 857
BstKTI GATC 6 cut(s) 538, 775, 1193, 1652, 1870, 1950
BstMAI GTCTC 2 cut(s) 48, 1657
BstMBI GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
BstMWI GCNNNNNNNGC 8 cut(s) 42, 755, 1025, 1343, 1522, 1834, 2042, 2045
BstNI CCWGG 4 cut(s) 229, 624, 1342, 1853
BstNSI RCATGY 8 cut(s) 25, 116, 1133, 1313, 1449, 1529, 1543, 2006
BstSCI CCNGG 4 cut(s) 227, 622, 1340, 1851
BstSFI CTRYAG 4 cut(s) 214, 798, 1101, 2046
BstSLI GKGCMC 1 cut(s) 47
BstSNI TACGTA 1 cut(s) 897
BstUI CGCG 4 cut(s) 259, 855, 1602, 1779
BstV1I GCAGC 6 cut(s) 1468, 1640, 1899, 2023, 2032, 2060
BstV2I GAAGAC 5 cut(s) 129, 151, 686, 1057, 1985
BstX2I RGATCY 2 cut(s) 772, 1649
BstYI RGATCY 2 cut(s) 772, 1649
Bsu15I ATCGAT 1 cut(s) 945
BsuRI GGCC 4 cut(s) 344, 749, 1293, 1907
BsuTUI ATCGAT 1 cut(s) 945
BtgI CCRYGG 1 cut(s) 1912
BtgZI GCGATG 3 cut(s) 20, 405, 1905
BtsI GCAGTG 1 cut(s) 1723
BtsIMutI CAGTG 3 cut(s) 47, 1382, 1723
BveI ACCTGC 1 cut(s) 1459
Cac8I GCNNGC 6 cut(s) 259, 751, 1108, 1541, 1766, 1920
CaiI CAGNNNCTG 1 cut(s) 155
CciI TCATGA 1 cut(s) 472
CfoI GCGC 5 cut(s) 36, 259, 261, 501, 857
Cfr10I RCCGGY 3 cut(s) 312, 1535, 2017
Cfr13I GGNCC 1 cut(s) 1905
ClaI ATCGAT 1 cut(s) 945
Csp6I GTAC 3 cut(s) 377, 1380, 1781
CspAI ACCGGT 1 cut(s) 312
CviQI GTAC 3 cut(s) 377, 1380, 1781
DdeI CTNAG 9 cut(s) 108, 132, 280, 765, 970, 1091, 1617, 1661, 2070
DinI GGCGCC 1 cut(s) 35
DpnI GATC 6 cut(s) 537, 774, 1192, 1651, 1869, 1949
DpnII GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
DraI TTTAAA 1 cut(s) 1210
DrdI GACNNNNNNGTC 1 cut(s) 1446
DseDI GACNNNNNNGTC 1 cut(s) 1446
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Eco105I TACGTA 1 cut(s) 897
Eco130I CCWWGG 3 cut(s) 359, 925, 1953
Eco147I AGGCCT 1 cut(s) 749
Eco24I GRGCYC 1 cut(s) 1092
Eco88I CYCGRG 3 cut(s) 1084, 1902, 1997
EcoRI GAATTC 1 cut(s) 546
EcoRII CCWGG 4 cut(s) 227, 622, 1340, 1851
EcoT14I CCWWGG 3 cut(s) 359, 925, 1953
EcoT22I ATGCAT 2 cut(s) 1009, 1527
EcoT38I GRGCYC 1 cut(s) 1092
EgeI GGCGCC 1 cut(s) 35
EheI GGCGCC 1 cut(s) 35
ErhI CCWWGG 3 cut(s) 359, 925, 1953
FalI AAGNNNNNCTT 2 cut(s) 1784, 1816
FauNDI CATATG 1 cut(s) 169
FbaI TGATCA 2 cut(s) 535, 1867
Fnu4HI GCNGC 7 cut(s) 1482, 1629, 1838, 1888, 2037, 2046, 2049
FriOI GRGCYC 1 cut(s) 1092
Fsp4HI GCNGC 7 cut(s) 1482, 1629, 1838, 1888, 2037, 2046, 2049
FspBI CTAG 4 cut(s) 360, 605, 1784, 1841
GlaI GCGC 5 cut(s) 35, 258, 260, 500, 856
GluI GCNGC 7 cut(s) 1482, 1629, 1838, 1888, 2037, 2046, 2049
GsaI CCCAGC 1 cut(s) 570
GsuI CTGGAG 1 cut(s) 1259
HaeII RGCGCY 1 cut(s) 37
HaeIII GGCC 4 cut(s) 344, 749, 1293, 1907
HapII CCGG 4 cut(s) 313, 583, 1536, 2018
HhaI GCGC 5 cut(s) 36, 259, 261, 501, 857
Hin1I GRCGYC 1 cut(s) 34
Hin6I GCGC 5 cut(s) 34, 257, 259, 499, 855
HinP1I GCGC 5 cut(s) 34, 257, 259, 499, 855
HincII GTYRAC 1 cut(s) 1935
HindII GTYRAC 1 cut(s) 1935
HinfI GANTC 7 cut(s) 845, 1082, 1412, 1720, 1940, 1990, 2066
HpaII CCGG 4 cut(s) 313, 583, 1536, 2018
HphI GGTGA 2 cut(s) 884, 2032
Hpy166II GTNNAC 3 cut(s) 580, 1382, 1935
Hpy188I TCNGA 5 cut(s) 151, 1094, 1303, 1618, 1662
Hpy8I GTNNAC 3 cut(s) 580, 1382, 1935
HpyAV CCTTC 5 cut(s) 74, 646, 1502, 1784, 1918
HpyCH4III ACNGT 5 cut(s) 42, 453, 630, 685, 1197
HpyCH4IV ACGT 3 cut(s) 462, 896, 1971
HpyF10VI GCNNNNNNNGC 8 cut(s) 42, 755, 1025, 1343, 1522, 1834, 2042, 2045
HpyF3I CTNAG 9 cut(s) 108, 132, 280, 765, 970, 1091, 1617, 1661, 2070
HpySE526I ACGT 3 cut(s) 462, 896, 1971
Hsp92I GRCGYC 1 cut(s) 34
HspAI GCGC 5 cut(s) 34, 257, 259, 499, 855
KasI GGCGCC 1 cut(s) 33
Ksp22I TGATCA 2 cut(s) 535, 1867
Kzo9I GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
LmnI GCTCC 5 cut(s) 364, 601, 927, 1733, 1833
Lsp1109I GCAGC 6 cut(s) 1468, 1640, 1899, 2023, 2032, 2060
LweI GCATC 9 cut(s) 190, 377, 382, 688, 1087, 1270, 1346, 1503, 2004
MaeI CTAG 4 cut(s) 360, 605, 1784, 1841
MaeII ACGT 3 cut(s) 462, 896, 1971
MaeIII GTNAC 4 cut(s) 65, 308, 907, 1364
MalI GATC 6 cut(s) 537, 774, 1192, 1651, 1869, 1949
MboI GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
MflI RGATCY 2 cut(s) 772, 1649
MhlI GDGCHC 3 cut(s) 47, 1092, 1903
Mly113I GGCGCC 1 cut(s) 34
MlyI GAGTC 4 cut(s) 1076, 1421, 1949, 1999
MmeI TCCRAC 1 cut(s) 579
MnlI CCTC 6 cut(s) 25, 523, 739, 762, 1040, 1554
Mph1103I ATGCAT 2 cut(s) 1009, 1527
MroXI GAANNNNTTC 2 cut(s) 546, 1608
MseI TTAA 4 cut(s) 72, 324, 1209, 1965
MslI CAYNNNNRTG 2 cut(s) 471, 1703
MspA1I CMGCKG 1 cut(s) 1391
MspI CCGG 4 cut(s) 313, 583, 1536, 2018
MspR9I CCNGG 4 cut(s) 229, 624, 1342, 1853
Mva1269I GAATGC 2 cut(s) 1747, 1768
MvaI CCWGG 4 cut(s) 229, 624, 1342, 1853
MvnI CGCG 4 cut(s) 259, 855, 1602, 1779
MwoI GCNNNNNNNGC 8 cut(s) 42, 755, 1025, 1343, 1522, 1834, 2042, 2045
NarI GGCGCC 1 cut(s) 34
NdeI CATATG 1 cut(s) 169
NdeII GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
NlaIV GGNNCC 3 cut(s) 35, 774, 1651
NmeAIII GCCGAG 1 cut(s) 1240
NmuCI GTSAC 1 cut(s) 907
NsiI ATGCAT 2 cut(s) 1009, 1527
NspI RCATGY 8 cut(s) 25, 116, 1133, 1313, 1449, 1529, 1543, 2006
PaeI GCATGC 1 cut(s) 1543
PaeR7I CTCGAG 1 cut(s) 1997
PagI TCATGA 1 cut(s) 472
PauI GCGCGC 1 cut(s) 257
PceI AGGCCT 1 cut(s) 749
PciI ACATGT 4 cut(s) 21, 1129, 1309, 1445
PcsI WCGNNNNNNNCGW 1 cut(s) 1977
PctI GAATGC 2 cut(s) 1747, 1768
PdmI GAANNNNTTC 2 cut(s) 546, 1608
PfeI GAWTC 3 cut(s) 845, 1720, 2066
PflFI GACNNNGTC 1 cut(s) 1939
PflMI CCANNNNNTGG 1 cut(s) 173
PinAI ACCGGT 1 cut(s) 312
PkrI GCNGC 7 cut(s) 1483, 1630, 1839, 1889, 2038, 2047, 2050
PleI GAGTC 4 cut(s) 1076, 1420, 1948, 1998
PluTI GGCGCC 1 cut(s) 37
PpsI GAGTC 4 cut(s) 1076, 1420, 1948, 1998
Ppu21I YACGTR 1 cut(s) 897
PscI ACATGT 4 cut(s) 21, 1129, 1309, 1445
Psp1406I AACGTT 1 cut(s) 462
Psp6I CCWGG 4 cut(s) 227, 622, 1340, 1851
PspFI CCCAGC 1 cut(s) 566
PspGI CCWGG 4 cut(s) 227, 622, 1340, 1851
PspN4I GGNNCC 3 cut(s) 35, 774, 1651
PspPI GGNCC 1 cut(s) 1905
PstI CTGCAG 1 cut(s) 2050
PstNI CAGNNNCTG 1 cut(s) 155
PsuI RGATCY 2 cut(s) 772, 1649
PsyI GACNNNGTC 1 cut(s) 1939
PteI GCGCGC 1 cut(s) 257
RsaI GTAC 3 cut(s) 378, 1381, 1782
RsaNI GTAC 3 cut(s) 377, 1380, 1781
RseI CAYNNNNRTG 2 cut(s) 471, 1703
SaqAI TTAA 4 cut(s) 72, 324, 1209, 1965
SatI GCNGC 7 cut(s) 1482, 1629, 1838, 1888, 2037, 2046, 2049
Sau3AI GATC 6 cut(s) 535, 772, 1190, 1649, 1867, 1947
Sau96I GGNCC 1 cut(s) 1905
SchI GAGTC 4 cut(s) 1076, 1421, 1949, 1999
ScrFI CCNGG 4 cut(s) 229, 624, 1342, 1853
SduI GDGCHC 3 cut(s) 47, 1092, 1903
SfaNI GCATC 9 cut(s) 190, 377, 382, 688, 1087, 1270, 1346, 1503, 2004
SfcI CTRYAG 4 cut(s) 214, 798, 1101, 2046
SfoI GGCGCC 1 cut(s) 35
Sfr274I CTCGAG 1 cut(s) 1997
SlaI CTCGAG 1 cut(s) 1997
SmiMI CAYNNNNRTG 2 cut(s) 471, 1703
SmlI CTYRAG 2 cut(s) 743, 1997
SmoI CTYRAG 2 cut(s) 743, 1997
SnaBI TACGTA 1 cut(s) 897
SpeI ACTAGT 1 cut(s) 1783
SphI GCATGC 1 cut(s) 1543
SseBI AGGCCT 1 cut(s) 749
SsiI CCGC 2 cut(s) 1391, 1837
SspDI GGCGCC 1 cut(s) 33
SspI AATATT 2 cut(s) 1567, 1820
SspMI CTAG 4 cut(s) 360, 605, 1784, 1841
StuI AGGCCT 1 cut(s) 749
StyD4I CCNGG 4 cut(s) 227, 622, 1340, 1851
StyI CCWWGG 3 cut(s) 359, 925, 1953
TaaI ACNGT 5 cut(s) 42, 453, 630, 685, 1197
TaiI ACGT 3 cut(s) 465, 899, 1974
TaqI TCGA 6 cut(s) 17, 263, 735, 945, 1257, 1998
TauI GCSGC 1 cut(s) 1840
TfiI GAWTC 3 cut(s) 845, 1720, 2066
Tru1I TTAA 4 cut(s) 72, 324, 1209, 1965
Tru9I TTAA 4 cut(s) 72, 324, 1209, 1965
TscAI CASTG 3 cut(s) 47, 1389, 1730
TseFI GTSAC 1 cut(s) 907
TseI GCWGC 6 cut(s) 1481, 1628, 1887, 2036, 2045, 2048
Tsp45I GTSAC 1 cut(s) 907
TspGWI ACGGA 2 cut(s) 1576, 1820
TspRI CASTG 3 cut(s) 47, 1389, 1730
Tth111I GACNNNGTC 1 cut(s) 1939
Van91I CCANNNNNTGG 1 cut(s) 173
XapI RAATTY 6 cut(s) 180, 546, 658, 1120, 1428, 1739
XceI RCATGY 8 cut(s) 25, 116, 1133, 1313, 1449, 1529, 1543, 2006
XcmI CCANNNNNNNNNTGG 1 cut(s) 54
XhoI CTCGAG 1 cut(s) 1997
XmaJI CCTAGG 1 cut(s) 359
XmnI GAANNNNTTC 2 cut(s) 546, 1608
XspI CTAG 4 cut(s) 360, 605, 1784, 1841
Zsp2I ATGCAT 2 cut(s) 1009, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.