Prupe.3G198400_v2.0.a1

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
20812146 .. 20815893
3748 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G198400.4

Sequence Viewer

Length: 2079 bp
ATGGCAATGAAGCCATCAAATAACATCTGGATTCGACGCCAACAGTGCCCGTGCGGAGATTGGAAGTGTTACATTCAGTATGAAGGAGATGATCTGGGCTCAGTAAGTTCTCAGCATGTAAAGAGTGAGACAACTCCATCTTCGTCATCATCAGAAGCTGTCTTCACTCCTTATGTTGGTCAAATATTCAAAACTGATGATGATGCTTTTGAATACTACAGCAATTTTGCCCGGAAGAATGGGTTTTCAATTAGAAAAGCACGCTCAACCGAAAGCCAAAACTTAGGGATATATAGACGAGATTTTGTTTGTTATCGGTCAGGATTTAATCAACCAAGAAAAAAGGCCAACGTGGAGCATCCCAGGGAGAGAAAATCAGTACGATGCGGATGCGATGCAAAGTTGTATTTGACAAAGGAAATTGTTGATGGTGTTATGCAATGGTATGTTTCACAGTTTAGTAACGTTCATAACCATGAGTTATTGGAAGATGACCAAGTGCGCCTACTTCCTGCATATCGTAAAATACAAGAGGTTGATCAAGAACGGATTCTTTTACTGTCCAAAGCTGGGTTTCCTGTAAACCGGATAGTCAAGGTGTTGGAGCTAGAAAAGGGAGTTCAACCTGGACAGTTGCCCTTCATAGAGAAAGATGTTAGGAATTTTGTTCGGACTTGTAAAAAGACTGTTCAAGAAAATGATGCTTTGCTCAATGAGAAAAGAGAGAACGATATGCTAGAACTTCTTGAGGCCTGCAAGGCTATGACTGGGAGGGATCCAGATTTTGTCTATGATTATACTATAGATGAAAATGAAAAGGTTGAAAATATTGCATGGTCATTTGGTGACTCCATTCGTGCATATACTATTTTTGGTGATGTAGTTGCTTTTGACACTTCATATCGCTCTGTCACTTATGGATTGCTCCTTGGAGTGTGGTTTGGTATTGATAATCATGGCAAGGCAATTTTCTTAGGGTGTGTGCTACTACAAGATGAAAGCTCGCATTCATTTGCTTGGGCTTTACAGGCTTTTATGCGATTTATGAGAGGGAGGCATCCACAGACTGTTCTTACAGATATAGACTCAGGGCTCAGAGATGCTATAGCAAGGGAATTGCCAAATACAAAACATGTTCTATGTATATGGCATATTTTATCCAAAATATCCAGTTGGTTCTCTTTGCCCCTTGGATCACAGTATGAAAATTTTAAAACTGAGTTTGATATGTTGTCTCAACTGGAGAGTGTTGAAGATTTTGAACATCAATGGAATATTTTGGTTGCTCGGTTTGGCCTTGTATCCGATAAGCATATAGCTCTGTTGTATTCATATCGAGCATCCTGGACATTTTCTTACATTAGAAGTTACTTTCTCGCTCGTACACTGACAGCTGAGTTTTCGCTGTCTTTGGAGTCATTCTTGAAAAGAATATTGAATGGACAGACATGTCTGCAAGTATTCTTTGAGCAGGTTAGTATTGCTGCCAACTTAGAGAATCAGACCAGAGAAGGGATGCAATATATGCATGTCAAGACTGGCATGCCTCTTGAAGAACATGCACGGAATATTCTTACACCTTATGCTTTCAATGTCTTACAACACGAAATTGTTCTGTCTGTGCAATATGCAACAACAGAAATGGCAAATGGATCGTATCTTGTGCGACACTACAAGAAATTGGAGGGAGAATGTCTTGTCATTTGGATGCCAGATGATGAGCAAATTCACTGTTCTTGTAAGGAATTTGAGCATTCTGGGATTTTATGCAGGCATTCTCTTCGCGTACTTGTAGTGAAGAACTACTTTCAACTCCCTGAAAAATATTTTCTGCTCCGTTGGCGGGTAGAAAGTTCATTGGTTTCTGTGGATGATCAAAATGCTCAAATCAGCAGCGACGATTGTGCTCAGGCCTTCCACAGTCTTACTGCTAGTTTATTGACAGAGTCCTTAATCTCCAAGGACAGATTTAATTATGTCCATAACGAACTTACGAGTCTTCTTGAGCATGTTAGAAATATGCCAGTAATCGACGAATATGCTGCAAATGCAGCAGCTAATAACATCAGTGAATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

693

Amino Acids

79.88

Weight (kDa)

5.88

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1449
Acc36I ACCTGC 1 cut(s) 1462
AccII CGCG 1 cut(s) 1785
AciI CCGC 3 cut(s) 54, 387, 1843
AclI AACGTT 1 cut(s) 465
AclWI GGATC 4 cut(s) 770, 783, 1201, 1660
AcsI RAATTY 4 cut(s) 661, 1207, 1725, 1745
AcyI GRCGYC 1 cut(s) 37
AfaI GTAC 3 cut(s) 381, 1384, 1788
AfiI CCNNNNNNNGG 4 cut(s) 176, 570, 1512, 1843
AflIII ACRYGT 2 cut(s) 1132, 1448
AjnI CCWGG 3 cut(s) 362, 625, 1343
AluBI AGCT 7 cut(s) 158, 569, 607, 1002, 1319, 1394, 2057
AluI AGCT 7 cut(s) 158, 569, 607, 1002, 1319, 1394, 2057
Alw21I GWGCWC 1 cut(s) 1909
Alw26I GTCTC 2 cut(s) 122, 1239
AlwI GGATC 4 cut(s) 770, 783, 1201, 1660
AlwNI CAGNNNCTG 1 cut(s) 158
AoxI GGCC 4 cut(s) 345, 750, 1294, 1911
ApeKI GCWGC 5 cut(s) 1484, 1893, 2042, 2051, 2054
ApoI RAATTY 4 cut(s) 661, 1207, 1725, 1745
Asp700I GAANNNNTTC 2 cut(s) 549, 1611
AspLEI GCGC 1 cut(s) 504
AsuC2I CCSGG 1 cut(s) 232
AsuHPI GGTGA 2 cut(s) 857, 887
BaeGI GKGCMC 1 cut(s) 50
BamHI GGATCC 1 cut(s) 775
BanII GRGCYC 2 cut(s) 101, 1095
BbsI GAAGAC 2 cut(s) 154, 1991
Bbv12I GWGCWC 1 cut(s) 1909
BbvI GCAGC 5 cut(s) 1471, 1905, 2029, 2063, 2066
BccI CCATC 3 cut(s) 22, 145, 422
BciT130I CCWGG 3 cut(s) 364, 627, 1345
BciVI GTATCC 1 cut(s) 1312
BclI TGATCA 2 cut(s) 538, 1873
BcnI CCSGG 1 cut(s) 232
BcoDI GTCTC 2 cut(s) 122, 1239
BfaI CTAG 3 cut(s) 608, 737, 1932
BfmI CTRYAG 3 cut(s) 217, 801, 1104
BfuAI ACCTGC 1 cut(s) 1462
BfuI GTATCC 1 cut(s) 1312
BglI GCCNNNNNGGC 1 cut(s) 758
BisI GCNGC 5 cut(s) 1485, 1894, 2043, 2052, 2055
BlsI GCNGC 5 cut(s) 1486, 1895, 2044, 2053, 2056
Bme1390I CCNGG 4 cut(s) 232, 364, 627, 1345
BmiI GGNNCC 1 cut(s) 777
BmrFI CCNGG 4 cut(s) 232, 364, 627, 1345
BmrI ACTGGG 1 cut(s) 777
BmuI ACTGGG 1 cut(s) 777
BpiI GAAGAC 2 cut(s) 154, 1991
BpmI CTGGAG 1 cut(s) 1262
Bpu10I CCTNAGC 1 cut(s) 1908
BpuEI CTTGAG 2 cut(s) 767, 2024
BpuMI CCSGG 1 cut(s) 232
BsaHI GRCGYC 1 cut(s) 37
BsaJI CCNNGG 5 cut(s) 362, 363, 928, 1189, 1959
BsaWI WCCGGW 1 cut(s) 585
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 570, 1512, 1843
Bse1I ACTGG 5 cut(s) 772, 1170, 1245, 1543, 2024
Bse3DI GCAATG 2 cut(s) 12, 446
BseBI CCWGG 3 cut(s) 364, 627, 1345
BseDI CCNNGG 5 cut(s) 362, 363, 928, 1189, 1959
BseGI GGATG 7 cut(s) 358, 395, 1057, 1340, 1521, 1713, 1876
BseLI CCNNNNNNNGG 4 cut(s) 176, 570, 1512, 1843
BseMI GCAATG 2 cut(s) 12, 446
BseMII CTCAG 7 cut(s) 114, 125, 1101, 1108, 1209, 1386, 1922
BseNI ACTGG 5 cut(s) 772, 1170, 1245, 1543, 2024
BseSI GKGCMC 1 cut(s) 50
BseXI GCAGC 5 cut(s) 1471, 1905, 2029, 2063, 2066
BseYI CCCAGC 1 cut(s) 569
Bsh1236I CGCG 1 cut(s) 1785
BshFI GGCC 4 cut(s) 347, 752, 1296, 1913
BsiHKAI GWGCWC 1 cut(s) 1909
BsiSI CCGG 2 cut(s) 232, 586
BslI CCNNNNNNNGG 4 cut(s) 176, 570, 1512, 1843
BsmAI GTCTC 2 cut(s) 122, 1239
BsmI GAATGC 3 cut(s) 1006, 1753, 1774
BsnI GGCC 4 cut(s) 347, 752, 1296, 1913
Bsp1286I GDGCHC 4 cut(s) 50, 101, 1095, 1909
Bsp143I GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
BspACI CCGC 3 cut(s) 54, 387, 1843
BspANI GGCC 4 cut(s) 347, 752, 1296, 1913
BspCNI CTCAG 7 cut(s) 113, 124, 1100, 1107, 1210, 1387, 1921
BspFNI CGCG 1 cut(s) 1785
BspLI GGNNCC 1 cut(s) 777
BspMI ACCTGC 1 cut(s) 1462
BspPI GGATC 4 cut(s) 770, 783, 1201, 1660
BsrDI GCAATG 2 cut(s) 12, 446
BsrI ACTGG 5 cut(s) 772, 1170, 1245, 1543, 2024
BssECI CCNNGG 5 cut(s) 362, 363, 928, 1189, 1959
BssMI GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
BssNI GRCGYC 1 cut(s) 37
BssT1I CCWWGG 3 cut(s) 928, 1189, 1959
Bst2UI CCWGG 3 cut(s) 364, 627, 1345
Bst4CI ACNGT 9 cut(s) 45, 456, 561, 633, 688, 1069, 1200, 1733, 1922
Bst6I CTCTTC 1 cut(s) 1785
BstACI GRCGYC 1 cut(s) 37
BstAPI GCANNNNNTGC 1 cut(s) 1525
BstC8I GCNNGC 5 cut(s) 262, 754, 1004, 1544, 1772
BstF5I GGATG 7 cut(s) 358, 395, 1057, 1340, 1521, 1713, 1876
BstFNI CGCG 1 cut(s) 1785
BstHHI GCGC 1 cut(s) 504
BstKTI GATC 6 cut(s) 94, 541, 778, 1196, 1655, 1876
BstMAI GTCTC 2 cut(s) 122, 1239
BstMBI GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
BstMWI GCNNNNNNNGC 7 cut(s) 45, 758, 1028, 1525, 1840, 2048, 2051
BstNI CCWGG 3 cut(s) 364, 627, 1345
BstNSI RCATGY 7 cut(s) 119, 1136, 1452, 1532, 1546, 1562, 2012
BstSCI CCNGG 4 cut(s) 230, 362, 625, 1343
BstSFI CTRYAG 3 cut(s) 217, 801, 1104
BstSLI GKGCMC 1 cut(s) 50
BstUI CGCG 1 cut(s) 1785
BstV1I GCAGC 5 cut(s) 1471, 1905, 2029, 2063, 2066
BstV2I GAAGAC 2 cut(s) 154, 1991
BstX2I RGATCY 1 cut(s) 775
BstYI RGATCY 1 cut(s) 775
BsuI GTATCC 1 cut(s) 1312
BsuRI GGCC 4 cut(s) 347, 752, 1296, 1913
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 7 cut(s) 358, 395, 1057, 1340, 1521, 1713, 1876
BtsIMutI CAGTG 4 cut(s) 50, 1385, 1729, 2074
BveI ACCTGC 1 cut(s) 1462
Cac8I GCNNGC 5 cut(s) 262, 754, 1004, 1544, 1772
CaiI CAGNNNCTG 1 cut(s) 158
CfoI GCGC 1 cut(s) 504
CseI GACGC 1 cut(s) 45
Csp6I GTAC 3 cut(s) 380, 1383, 1787
CviQI GTAC 3 cut(s) 380, 1383, 1787
DpnI GATC 6 cut(s) 93, 540, 777, 1195, 1654, 1875
DpnII GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
DraI TTTAAA 1 cut(s) 1213
DrdI GACNNNNNNGTC 1 cut(s) 1449
DseDI GACNNNNNNGTC 1 cut(s) 1449
Eam1104I CTCTTC 1 cut(s) 1785
EarI CTCTTC 1 cut(s) 1785
Eco130I CCWWGG 3 cut(s) 928, 1189, 1959
Eco147I AGGCCT 2 cut(s) 752, 1913
Eco24I GRGCYC 2 cut(s) 101, 1095
EcoRII CCWGG 3 cut(s) 362, 625, 1343
EcoT14I CCWWGG 3 cut(s) 928, 1189, 1959
EcoT22I ATGCAT 1 cut(s) 1530
EcoT38I GRGCYC 2 cut(s) 101, 1095
ErhI CCWWGG 3 cut(s) 928, 1189, 1959
FalI AAGNNNNNCTT 2 cut(s) 1790, 1822
FauI CCCGC 1 cut(s) 1836
FbaI TGATCA 2 cut(s) 538, 1873
Fnu4HI GCNGC 5 cut(s) 1485, 1894, 2043, 2052, 2055
FokI GGATG 7 cut(s) 345, 402, 1044, 1327, 1528, 1720, 1883
FriOI GRGCYC 2 cut(s) 101, 1095
Fsp4HI GCNGC 5 cut(s) 1485, 1894, 2043, 2052, 2055
FspBI CTAG 3 cut(s) 608, 737, 1932
GlaI GCGC 1 cut(s) 503
GluI GCNGC 5 cut(s) 1485, 1894, 2043, 2052, 2055
GsaI CCCAGC 1 cut(s) 573
GsuI CTGGAG 1 cut(s) 1262
HaeIII GGCC 4 cut(s) 347, 752, 1296, 1913
HapII CCGG 2 cut(s) 232, 586
HgaI GACGC 1 cut(s) 45
HhaI GCGC 1 cut(s) 504
Hin1I GRCGYC 1 cut(s) 37
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HinfI GANTC 9 cut(s) 31, 550, 848, 1085, 1415, 1498, 1946, 1996, 2072
HpaII CCGG 2 cut(s) 232, 586
HphI GGTGA 2 cut(s) 857, 887
Hpy166II GTNNAC 2 cut(s) 583, 1385
Hpy188I TCNGA 5 cut(s) 154, 672, 1097, 1306, 1503
Hpy8I GTNNAC 2 cut(s) 583, 1385
Hpy99I CGWCG 3 cut(s) 39, 1901, 2036
HpyAV CCTTC 4 cut(s) 77, 649, 1505, 1924
HpyCH4III ACNGT 9 cut(s) 45, 456, 561, 633, 688, 1069, 1200, 1733, 1922
HpyCH4IV ACGT 2 cut(s) 351, 465
HpyF10VI GCNNNNNNNGC 7 cut(s) 45, 758, 1028, 1525, 1840, 2048, 2051
HpySE526I ACGT 2 cut(s) 351, 465
Hsp92I GRCGYC 1 cut(s) 37
HspAI GCGC 1 cut(s) 502
Ksp22I TGATCA 2 cut(s) 538, 1873
Kzo9I GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
LmnI GCTCC 4 cut(s) 355, 604, 930, 1839
Lsp1109I GCAGC 5 cut(s) 1471, 1905, 2029, 2063, 2066
MaeI CTAG 3 cut(s) 608, 737, 1932
MaeII ACGT 2 cut(s) 351, 465
MaeIII GTNAC 5 cut(s) 68, 461, 845, 910, 1367
MalI GATC 6 cut(s) 93, 540, 777, 1195, 1654, 1875
MboI GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
MboII GAAGA 9 cut(s) 132, 154, 247, 500, 1265, 1565, 1772, 1810, 1991
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 4 cut(s) 50, 101, 1095, 1909
MlyI GAGTC 5 cut(s) 842, 1079, 1424, 1955, 2005
MmeI TCCRAC 1 cut(s) 582
MnlI CCTC 7 cut(s) 526, 742, 765, 1043, 1047, 1557, 1678
Mph1103I ATGCAT 1 cut(s) 1530
MroXI GAANNNNTTC 2 cut(s) 549, 1611
MseI TTAA 4 cut(s) 327, 1212, 1952, 1971
MslI CAYNNNNRTG 2 cut(s) 474, 1706
MspA1I CMGCKG 1 cut(s) 1394
MspI CCGG 2 cut(s) 232, 586
MspR9I CCNGG 4 cut(s) 232, 364, 627, 1345
Mva1269I GAATGC 3 cut(s) 1006, 1753, 1774
MvaI CCWGG 3 cut(s) 364, 627, 1345
MvnI CGCG 1 cut(s) 1785
MwoI GCNNNNNNNGC 7 cut(s) 45, 758, 1028, 1525, 1840, 2048, 2051
NciI CCSGG 1 cut(s) 232
NdeII GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
NlaIV GGNNCC 1 cut(s) 777
NmuCI GTSAC 2 cut(s) 845, 910
NsiI ATGCAT 1 cut(s) 1530
NspI RCATGY 7 cut(s) 119, 1136, 1452, 1532, 1546, 1562, 2012
PaeI GCATGC 1 cut(s) 1546
PasI CCCWGGG 1 cut(s) 363
PceI AGGCCT 2 cut(s) 752, 1913
PciI ACATGT 2 cut(s) 1132, 1448
PctI GAATGC 3 cut(s) 1006, 1753, 1774
PdmI GAANNNNTTC 2 cut(s) 549, 1611
PfeI GAWTC 4 cut(s) 31, 550, 1498, 2072
PflFI GACNNNGTC 1 cut(s) 1945
PfoI TCCNGGA 1 cut(s) 1343
PkrI GCNGC 5 cut(s) 1486, 1895, 2044, 2053, 2056
PleI GAGTC 5 cut(s) 842, 1079, 1423, 1954, 2004
PpsI GAGTC 5 cut(s) 842, 1079, 1423, 1954, 2004
PscI ACATGT 2 cut(s) 1132, 1448
Psp1406I AACGTT 1 cut(s) 465
Psp6I CCWGG 3 cut(s) 362, 625, 1343
PspFI CCCAGC 1 cut(s) 569
PspGI CCWGG 3 cut(s) 362, 625, 1343
PspN4I GGNNCC 1 cut(s) 777
PstNI CAGNNNCTG 1 cut(s) 158
PsuI RGATCY 1 cut(s) 775
PsyI GACNNNGTC 1 cut(s) 1945
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 3 cut(s) 381, 1384, 1788
RsaNI GTAC 3 cut(s) 380, 1383, 1787
RseI CAYNNNNRTG 2 cut(s) 474, 1706
SaqAI TTAA 4 cut(s) 327, 1212, 1952, 1971
SatI GCNGC 5 cut(s) 1485, 1894, 2043, 2052, 2055
Sau3AI GATC 6 cut(s) 91, 538, 775, 1193, 1652, 1873
SchI GAGTC 5 cut(s) 842, 1079, 1424, 1955, 2005
ScrFI CCNGG 4 cut(s) 232, 364, 627, 1345
SduI GDGCHC 4 cut(s) 50, 101, 1095, 1909
SfcI CTRYAG 3 cut(s) 217, 801, 1104
SmiMI CAYNNNNRTG 2 cut(s) 474, 1706
SmlI CTYRAG 2 cut(s) 746, 2003
SmoI CTYRAG 2 cut(s) 746, 2003
SphI GCATGC 1 cut(s) 1546
SseBI AGGCCT 2 cut(s) 752, 1913
SsiI CCGC 3 cut(s) 54, 387, 1843
SspI AATATT 6 cut(s) 186, 829, 1276, 1434, 1570, 1826
SspMI CTAG 3 cut(s) 608, 737, 1932
StuI AGGCCT 2 cut(s) 752, 1913
StyD4I CCNGG 4 cut(s) 230, 362, 625, 1343
StyI CCWWGG 3 cut(s) 928, 1189, 1959
TaaI ACNGT 9 cut(s) 45, 456, 561, 633, 688, 1069, 1200, 1733, 1922
TaiI ACGT 2 cut(s) 354, 468
TaqI TCGA 3 cut(s) 34, 1336, 2031
TaqII GACCGA 1 cut(s) 306
TfiI GAWTC 4 cut(s) 31, 550, 1498, 2072
Tru1I TTAA 4 cut(s) 327, 1212, 1952, 1971
Tru9I TTAA 4 cut(s) 327, 1212, 1952, 1971
TscAI CASTG 4 cut(s) 50, 1392, 1736, 2074
TseFI GTSAC 2 cut(s) 845, 910
TseI GCWGC 5 cut(s) 1484, 1893, 2042, 2051, 2054
Tsp45I GTSAC 2 cut(s) 845, 910
TspGWI ACGGA 3 cut(s) 562, 1579, 1826
TspRI CASTG 4 cut(s) 50, 1392, 1736, 2074
Tth111I GACNNNGTC 1 cut(s) 1945
XapI RAATTY 4 cut(s) 661, 1207, 1725, 1745
XceI RCATGY 7 cut(s) 119, 1136, 1452, 1532, 1546, 1562, 2012
XmnI GAANNNNTTC 2 cut(s) 549, 1611
XspI CTAG 3 cut(s) 608, 737, 1932
Zsp2I ATGCAT 1 cut(s) 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.