Rorug02G0451700

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007860
Physical Location & Seq
Forward (+)
57936150 .. 57942342
6193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0451700.1

Sequence Viewer

Length: 2172 bp
ATGGAGGACGACGGGTCGTATAAACGGGGTAGGAAGAAAATGGGTATGTCTAGAAAGCCTGAAAAACAAGGTCAAGGTCAAGGTCGGTCCTTTGATGCTGGTGTTAGTAAAACTGCATCGGGGCGGGGCTCGAATCGGGAGAGCTATTCGGCACCGCAGACTGTTGTGAGGAAACAGGTTGACCCCGAAACCGCAAAGTACTTTTCGGAGATTGCTAACCTTTTCGAGAGTGATGGGATTGATATTGAGGAGCGGTCGTCTTTATGTAGTAATGCACTTGAAGAAACTAGGGGGAAAGAGCTGGAGCTTGCGACGGATTATATTATTAGTCACACTTTGCAGACTCTCGTTGAGGGCTGTGAAGTCGACTGTCTTTGTGCTTTTCTCCGGAGCTGTGCGAAGAATTTCCCTTTGATTGCAATGGATAAGTCTGGATCTCATGTAGCTGAGTCTGCCATCAGGGCTTTATCTAAGCATCTTCAGGAGAGTGACGCGTATGCTGTTATTGAGGACACTCTAAATACAATCTGCAAGGTGATTGTGAAGAATCCTGTTGATCTGATGTGTGATTGTTACGGATCTCATGTTCTACGAAGTCTTCTCTCTCTTTTTAAAGGAGTGCCATTGGATTCTTCTGAGTTCCGAATGAGGAAGTCATCTTCTGCCCTACCAGAACGGTTTAATTTCAAGGCACCTCTATCAGACACAGATGTTTCACCACATGTTAGACCTGGATTCCCGGATTTACTTAAGTTTCTTGTTTCCGGGATGTTAAAATGTGCTCGAAACAACATTAAAACCCTTCAAGTTGATCAGTACAGCAGTTTGGTTCTACAGACTACTCTGAAGTTGTTAGCAGGGGATGAAGAAGAGCTGTTGCAAATAATTCCCATTCTTATTGGATGTACCAGGGAAGATATTGTAGAGGAGAACTCCATTGAACCAACTATCGTGAGAGATGTTTTAGGTTTGATGAAAGAAACAGCATTTAGCCATTTAATGGAGGTTGTTTTGGAAGTAGCTCCTGACGTCTTGTACAATGGAATCTTCTCAAAGATCTTCAGGAACTCTTTATTTGACCTTTCGTCCCATCATTGTGGGAATTTTGTCATCCAAGCACTTATTTCTCATACAAGGGATCAGGATCAAATGGAGATAATCTGGGAGGAACTTGGTTCGAATTTCAAGGATCTGCTTAAAATGGGAAGATCTGGTGTTATTGCTTCGCTTATCGCTGCAAGTCAAAGGCTTCATAGTTACGAACACAAGTGTTGTCAGGCTCTTGCTGCTGCAGTATATTCAAGCAGTGAGTCTTCAACATGCATTGTTCCCCGTATACTGTTTCTTGATAGCTACTTCAATTGTGAAGATAAGTCTAATTGGAGTTGGCCAAGCGGTGTTAAAATGCACGTCATGGGTTCTTTGATACTGCAAGAAGTTTTTCGATTTCAAATTGAATTTATACAGCCTTTTATTACAAGTATTACATCCATCACAGCTGATAATGTCCTTGAAGCTGCTAAGGATCCAGGGGGTGCTCGTGTTATTGAAGCATTTTTAAGTTCTAATGCTTCTGCAAAACTGAAACGCCGATTAGTTATGAGGCTTCGTGGACATTTTGGAGAGCTAGCATTGCACTCGTCAGGTTCCTTTACTGTTGAAAAGTGCTTTACTACTGGTAACATTTCACAGAGGGAAGCCATAGTATCTGAGTTGGTAGCCGTGCAAAGTGAGCTTTGGAATACAAGGCAAGGTCCTCATCTTATGAGGAAACTAGATGTTGATGGATTTGCTGCTAGACCTGAGCAGTGGAGGTCCAGACAAGAATCAAAGCAATCAACTTTGAGAGACTTTTCTGCTACATTTGGCTCTAGTGAGACCAAACCATCAAACAATAGTGAGACTGAGCAATCAAAGAAGAGCAGCTTTCTTTCTGATGATTATAAGAAAAAATCAAAAGTGGGAAAAACAGTTGACCATCACCAGGCATCTCCTGCACCATTTTTGAGTACAACAGGCTTCAAACGCAAGCCCAAGGAAAAAGAACAGAGCAACAAGAAGTTTGCAAGAGTCTCGGTAGATGAGGATGTTTCTAAAGTGAAGAATAAGTCAAAGAAGAAAAGGCATGGTGACGATGCTTTTTCTAAATCCCCCAAGAAGTTGAAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

723

Amino Acids

80.6

Weight (kDa)

8.42

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUF_NOP9 PF22493 98 - 582 5.6e-67 NOP9-like PUF repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1944
AatII GACGTC 1 cut(s) 1032
AccB1I GGYRCC 2 cut(s) 151, 691
AccB7I CCANNNNNTGG 1 cut(s) 1000
AccBSI CCGCTC 1 cut(s) 253
AccI GTMKAC 2 cut(s) 366, 1336
AccII CGCG 1 cut(s) 494
AccIII TCCGGA 1 cut(s) 387
AciI CCGC 5 cut(s) 124, 155, 192, 253, 1395
AclWI GGATC 7 cut(s) 442, 586, 1146, 1152, 1197, 1520, 1533
AcoI YGGCCR 1 cut(s) 1388
AcsI RAATTY 4 cut(s) 403, 1102, 1180, 1457
AcuI CTGAAG 3 cut(s) 464, 866, 1045
AcyI GRCGYC 1 cut(s) 1029
AfaI GTAC 5 cut(s) 200, 818, 907, 1037, 2011
AfiI CCNNNNNNNGG 2 cut(s) 1000, 1984
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 2 cut(s) 492, 721
AhdI GACNNNNNGTC 2 cut(s) 13, 1084
AjiI CACGTC 1 cut(s) 1411
AjnI CCWGG 4 cut(s) 730, 908, 1528, 1983
AloI GAACNNNNNNTCC 2 cut(s) 570, 602
Alw21I GWGCWC 2 cut(s) 784, 1540
Alw26I GTCTC 4 cut(s) 1842, 1871, 1895, 2077
AlwI GGATC 7 cut(s) 442, 586, 1146, 1152, 1197, 1520, 1533
Aor13HI TCCGGA 1 cut(s) 387
AoxI GGCC 1 cut(s) 1388
ApeKI GCWGC 6 cut(s) 1235, 1286, 1289, 1517, 1793, 1923
ApoI RAATTY 4 cut(s) 403, 1102, 1180, 1457
Asp700I GAANNNNTTC 2 cut(s) 404, 1440
AspS9I GGNCC 3 cut(s) 87, 1754, 1815
AsuC2I CCSGG 2 cut(s) 740, 766
AsuHPI GGTGA 4 cut(s) 547, 708, 1973, 2141
AsuII TTCGAA 1 cut(s) 1178
AsuNHI GCTAGC 1 cut(s) 1627
AvaII GGWCC 3 cut(s) 87, 1754, 1815
BalI TGGCCA 1 cut(s) 1390
BamHI GGATCC 1 cut(s) 1525
BanI GGYRCC 2 cut(s) 151, 691
BanII GRGCYC 1 cut(s) 131
BauI CACGAG 1 cut(s) 1539
BbsI GAAGAC 2 cut(s) 590, 1305
Bbv12I GWGCWC 2 cut(s) 784, 1540
BbvI GCAGC 6 cut(s) 1222, 1273, 1276, 1504, 1780, 1935
BccI CCATC 7 cut(s) 227, 464, 1098, 1499, 1778, 1894, 1986
BceAI ACGGC 1 cut(s) 1706
BcgI CGANNNNNNTGC 4 cut(s) 1620, 1654, 2055, 2089
BciT130I CCWGG 4 cut(s) 732, 910, 1530, 1985
BclI TGATCA 1 cut(s) 811
BcnI CCSGG 2 cut(s) 740, 766
BcoDI GTCTC 4 cut(s) 1842, 1871, 1895, 2077
BfaI CTAG 6 cut(s) 51, 288, 1628, 1775, 1797, 1872
BfmI CTRYAG 2 cut(s) 833, 1290
BfrI CTTAAG 1 cut(s) 749
BglI GCCNNNNNGGC 1 cut(s) 461
BglII AGATCT 2 cut(s) 1056, 1208
BisI GCNGC 6 cut(s) 1236, 1287, 1290, 1518, 1794, 1924
BlsI GCNGC 6 cut(s) 1237, 1288, 1291, 1519, 1795, 1925
BmcAI AGTACT 1 cut(s) 200
Bme1390I CCNGG 6 cut(s) 732, 740, 766, 910, 1530, 1985
Bme18I GGWCC 3 cut(s) 87, 1754, 1815
BmeRI GACNNNNNGTC 2 cut(s) 13, 1084
BmgBI CACGTC 1 cut(s) 1411
BmgT120I GGNCC 3 cut(s) 87, 1754, 1815
BmiI GGNNCC 4 cut(s) 153, 693, 1527, 1648
BmrFI CCNGG 6 cut(s) 732, 740, 766, 910, 1530, 1985
BmsI GCATC 5 cut(s) 85, 125, 484, 1997, 2125
BmtI GCTAGC 1 cut(s) 1631
BpiI GAAGAC 2 cut(s) 590, 1305
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpmI CTGGAG 1 cut(s) 323
Bpu10I CCTNAGC 2 cut(s) 1521, 1803
Bpu14I TTCGAA 1 cut(s) 1178
BpuMI CCSGG 2 cut(s) 740, 766
BsaBI GATNNNNATC 1 cut(s) 1143
BsaHI GRCGYC 1 cut(s) 1029
BsaI GGTCTC 1 cut(s) 1871
BsaJI CCNNGG 3 cut(s) 909, 1529, 2034
BsaWI WCCGGW 1 cut(s) 387
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 2 cut(s) 1000, 1984
Bse1I ACTGG 1 cut(s) 1681
Bse3DI GCAATG 2 cut(s) 426, 1631
Bse8I GATNNNNATC 1 cut(s) 1143
BseAI TCCGGA 1 cut(s) 387
BseBI CCWGG 4 cut(s) 732, 910, 1530, 1985
BseDI CCNNGG 3 cut(s) 909, 1529, 2034
BseGI GGATG 6 cut(s) 774, 868, 908, 1110, 1487, 2092
BseJI GATNNNNATC 1 cut(s) 1143
BseLI CCNNNNNNNGG 2 cut(s) 1000, 1984
BseMI GCAATG 2 cut(s) 426, 1631
BseMII CTCAG 5 cut(s) 438, 627, 1701, 1794, 1896
BseNI ACTGG 1 cut(s) 1681
BseRI GAGGAG 2 cut(s) 263, 941
BseXI GCAGC 6 cut(s) 1222, 1273, 1276, 1504, 1780, 1935
BsgI GTGCAG 1 cut(s) 1980
Bsh1236I CGCG 1 cut(s) 494
Bsh1285I CGRYCG 1 cut(s) 257
BshFI GGCC 1 cut(s) 1390
BshNI GGYRCC 2 cut(s) 151, 691
BsiEI CGRYCG 1 cut(s) 257
BsiHKAI GWGCWC 2 cut(s) 784, 1540
BsiSI CCGG 3 cut(s) 388, 740, 765
BslFI GGGAC 1 cut(s) 1072
BslI CCNNNNNNNGG 2 cut(s) 1000, 1984
BsmAI GTCTC 4 cut(s) 1842, 1871, 1895, 2077
BsmFI GGGAC 1 cut(s) 1072
BsnI GGCC 1 cut(s) 1390
Bso31I GGTCTC 1 cut(s) 1871
Bsp119I TTCGAA 1 cut(s) 1178
Bsp1286I GDGCHC 3 cut(s) 131, 784, 1540
Bsp13I TCCGGA 1 cut(s) 387
Bsp1407I TGTACA 1 cut(s) 1035
BspACI CCGC 5 cut(s) 124, 155, 192, 253, 1395
BspANI GGCC 1 cut(s) 1390
BspCNI CTCAG 5 cut(s) 439, 628, 1702, 1795, 1897
BspEI TCCGGA 1 cut(s) 387
BspFNI CGCG 1 cut(s) 494
BspLI GGNNCC 4 cut(s) 153, 693, 1527, 1648
BspMAI CTGCAG 1 cut(s) 1294
BspOI GCTAGC 1 cut(s) 1631
BspPI GGATC 7 cut(s) 442, 586, 1146, 1152, 1197, 1520, 1533
BspQI GCTCTTC 2 cut(s) 864, 1913
BspT104I TTCGAA 1 cut(s) 1178
BspT107I GGYRCC 2 cut(s) 151, 691
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 1871
BsrBI CCGCTC 1 cut(s) 253
BsrDI GCAATG 2 cut(s) 426, 1631
BsrGI TGTACA 1 cut(s) 1035
BsrI ACTGG 1 cut(s) 1681
BssECI CCNNGG 3 cut(s) 909, 1529, 2034
BssNAI GTATAC 1 cut(s) 1337
BssNI GRCGYC 1 cut(s) 1029
BssSI CACGAG 1 cut(s) 1539
BssT1I CCWWGG 1 cut(s) 2034
Bst1107I GTATAC 1 cut(s) 1337
Bst2BI CACGAG 1 cut(s) 1539
Bst2UI CCWGG 4 cut(s) 732, 910, 1530, 1985
Bst4CI ACNGT 6 cut(s) 163, 371, 678, 1341, 1657, 1972
Bst6I CTCTTC 2 cut(s) 864, 1913
BstACI GRCGYC 1 cut(s) 1029
BstAFI CTTAAG 1 cut(s) 749
BstAPI GCANNNNNTGC 1 cut(s) 1994
BstAUI TGTACA 1 cut(s) 1035
BstBI TTCGAA 1 cut(s) 1178
BstC8I GCNNGC 3 cut(s) 309, 1629, 2030
BstDEI CTNAG 7 cut(s) 447, 471, 636, 1521, 1710, 1803, 1905
BstF5I GGATG 6 cut(s) 774, 868, 908, 1110, 1487, 2092
BstFNI CGCG 1 cut(s) 494
BstMAI GTCTC 4 cut(s) 1842, 1871, 1895, 2077
BstMCI CGRYCG 1 cut(s) 257
BstMWI GCNNNNNNNGC 7 cut(s) 452, 461, 1286, 1633, 1732, 1994, 2025
BstNI CCWGG 4 cut(s) 732, 910, 1530, 1985
BstNSI RCATGY 2 cut(s) 725, 1323
BstSCI CCNGG 6 cut(s) 730, 738, 764, 908, 1528, 1983
BstSFI CTRYAG 2 cut(s) 833, 1290
BstUI CGCG 1 cut(s) 494
BstV1I GCAGC 6 cut(s) 1222, 1273, 1276, 1504, 1780, 1935
BstV2I GAAGAC 2 cut(s) 590, 1305
BstX2I RGATCY 6 cut(s) 434, 578, 1056, 1189, 1208, 1525
BstXI CCANNNNNNTGG 1 cut(s) 1097
BstYI RGATCY 6 cut(s) 434, 578, 1056, 1189, 1208, 1525
BstZ17I GTATAC 1 cut(s) 1337
BsuRI GGCC 1 cut(s) 1390
BtrI CACGTC 1 cut(s) 1411
BtsCI GGATG 6 cut(s) 774, 868, 908, 1110, 1487, 2092
BtsI GCAGTG 2 cut(s) 1312, 1814
BtsIMutI CAGTG 2 cut(s) 1312, 1814
Cac8I GCNNGC 3 cut(s) 309, 1629, 2030
Cfr13I GGNCC 3 cut(s) 87, 1754, 1815
CseI GACGC 1 cut(s) 500
Csp6I GTAC 5 cut(s) 199, 817, 906, 1036, 2010
CviAII CATG 7 cut(s) 440, 584, 722, 1320, 1414, 2126, 2169
CviQI GTAC 5 cut(s) 199, 817, 906, 1036, 2010
DdeI CTNAG 7 cut(s) 447, 471, 636, 1521, 1710, 1803, 1905
DraI TTTAAA 1 cut(s) 613
DriI GACNNNNNGTC 2 cut(s) 13, 1084
EaeI YGGCCR 1 cut(s) 1388
Eam1104I CTCTTC 2 cut(s) 864, 1913
Eam1105I GACNNNNNGTC 2 cut(s) 13, 1084
EarI CTCTTC 2 cut(s) 864, 1913
Eco130I CCWWGG 1 cut(s) 2034
Eco24I GRGCYC 1 cut(s) 131
Eco31I GGTCTC 1 cut(s) 1871
Eco47I GGWCC 3 cut(s) 87, 1754, 1815
Eco57I CTGAAG 3 cut(s) 464, 866, 1045
EcoO109I RGGNCCY 1 cut(s) 1754
EcoRII CCWGG 4 cut(s) 730, 908, 1528, 1983
EcoT14I CCWWGG 1 cut(s) 2034
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 1 cut(s) 131
ErhI CCWWGG 1 cut(s) 2034
FaeI CATG 7 cut(s) 443, 587, 725, 1323, 1417, 2129, 2172
FalI AAGNNNNNCTT 2 cut(s) 1910, 1942
FaqI GGGAC 1 cut(s) 1072
FatI CATG 7 cut(s) 439, 583, 721, 1319, 1413, 2125, 2168
FauI CCCGC 1 cut(s) 117
FbaI TGATCA 1 cut(s) 811
FblI GTMKAC 2 cut(s) 366, 1336
Fnu4HI GCNGC 6 cut(s) 1236, 1287, 1290, 1518, 1794, 1924
FokI GGATG 6 cut(s) 781, 875, 915, 1097, 1474, 2099
FriOI GRGCYC 1 cut(s) 131
Fsp4HI GCNGC 6 cut(s) 1236, 1287, 1290, 1518, 1794, 1924
FspBI CTAG 6 cut(s) 51, 288, 1628, 1775, 1797, 1872
GluI GCNGC 6 cut(s) 1236, 1287, 1290, 1518, 1794, 1924
GsuI CTGGAG 1 cut(s) 323
HaeIII GGCC 1 cut(s) 1390
HapII CCGG 3 cut(s) 388, 740, 765
HgaI GACGC 1 cut(s) 500
Hin1I GRCGYC 1 cut(s) 1029
Hin1II CATG 7 cut(s) 443, 587, 725, 1323, 1417, 2129, 2172
HincII GTYRAC 3 cut(s) 181, 367, 1975
HindII GTYRAC 3 cut(s) 181, 367, 1975
HpaII CCGG 3 cut(s) 388, 740, 765
HphI GGTGA 4 cut(s) 547, 708, 1973, 2141
Hpy166II GTNNAC 5 cut(s) 181, 367, 1337, 1613, 1975
Hpy188I TCNGA 8 cut(s) 208, 561, 637, 644, 703, 846, 1711, 1936
Hpy8I GTNNAC 5 cut(s) 181, 367, 1337, 1613, 1975
Hpy99I CGWCG 2 cut(s) 14, 316
HpyAV CCTTC 1 cut(s) 812
HpyCH4III ACNGT 6 cut(s) 163, 371, 678, 1341, 1657, 1972
HpyCH4IV ACGT 2 cut(s) 1029, 1410
HpyF10VI GCNNNNNNNGC 7 cut(s) 452, 461, 1286, 1633, 1732, 1994, 2025
HpyF3I CTNAG 7 cut(s) 447, 471, 636, 1521, 1710, 1803, 1905
HpySE526I ACGT 2 cut(s) 1029, 1410
Hsp92I GRCGYC 1 cut(s) 1029
Hsp92II CATG 7 cut(s) 443, 587, 725, 1323, 1417, 2129, 2172
Kpn2I TCCGGA 1 cut(s) 387
Ksp22I TGATCA 1 cut(s) 811
LguI GCTCTTC 2 cut(s) 864, 1913
LmnI GCTCC 4 cut(s) 250, 304, 390, 1027
Lsp1109I GCAGC 6 cut(s) 1222, 1273, 1276, 1504, 1780, 1935
LweI GCATC 5 cut(s) 85, 125, 484, 1997, 2125
MaeI CTAG 6 cut(s) 51, 288, 1628, 1775, 1797, 1872
MaeII ACGT 2 cut(s) 1029, 1410
MaeIII GTNAC 6 cut(s) 329, 488, 572, 1256, 1679, 2129
MbiI CCGCTC 1 cut(s) 253
MfeI CAATTG 1 cut(s) 1360
MflI RGATCY 6 cut(s) 434, 578, 1056, 1189, 1208, 1525
MhlI GDGCHC 3 cut(s) 131, 784, 1540
MlsI TGGCCA 1 cut(s) 1390
MluCI AATT 9 cut(s) 403, 682, 885, 1102, 1180, 1360, 1378, 1452, 1457
MluI ACGCGT 1 cut(s) 492
MluNI TGGCCA 1 cut(s) 1390
MlyI GAGTC 4 cut(s) 337, 458, 1319, 2079
Mox20I TGGCCA 1 cut(s) 1390
Mph1103I ATGCAT 1 cut(s) 1325
MroI TCCGGA 1 cut(s) 387
MroXI GAANNNNTTC 2 cut(s) 404, 1440
MscI TGGCCA 1 cut(s) 1390
MseI TTAA 9 cut(s) 612, 681, 750, 773, 795, 998, 1197, 1401, 1559
MslI CAYNNNNRTG 1 cut(s) 1095
Msp20I TGGCCA 1 cut(s) 1390
MspA1I CMGCKG 1 cut(s) 1499
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 3 cut(s) 388, 740, 765
MspR9I CCNGG 6 cut(s) 732, 740, 766, 910, 1530, 1985
MunI CAATTG 1 cut(s) 1360
MvaI CCWGG 4 cut(s) 732, 910, 1530, 1985
MvnI CGCG 1 cut(s) 494
MwoI GCNNNNNNNGC 7 cut(s) 452, 461, 1286, 1633, 1732, 1994, 2025
NciI CCSGG 2 cut(s) 740, 766
NheI GCTAGC 1 cut(s) 1627
NlaIII CATG 7 cut(s) 443, 587, 725, 1323, 1417, 2129, 2172
NlaIV GGNNCC 4 cut(s) 153, 693, 1527, 1648
NmuCI GTSAC 3 cut(s) 329, 488, 2129
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 2 cut(s) 725, 1323
NspV TTCGAA 1 cut(s) 1178
PciI ACATGT 1 cut(s) 721
PciSI GCTCTTC 2 cut(s) 864, 1913
PdmI GAANNNNTTC 2 cut(s) 404, 1440
PfeI GAWTC 6 cut(s) 133, 547, 629, 735, 1044, 1826
PflMI CCANNNNNTGG 1 cut(s) 1000
PfoI TCCNGGA 2 cut(s) 738, 764
PkrI GCNGC 6 cut(s) 1237, 1288, 1291, 1519, 1795, 1925
PleI GAGTC 4 cut(s) 337, 457, 1318, 2078
PpsI GAGTC 4 cut(s) 337, 457, 1318, 2078
PpuMI RGGWCCY 1 cut(s) 1754
PscI ACATGT 1 cut(s) 721
PsiI TTATAA 1 cut(s) 1944
Psp5II RGGWCCY 1 cut(s) 1754
Psp6I CCWGG 4 cut(s) 730, 908, 1528, 1983
PspGI CCWGG 4 cut(s) 730, 908, 1528, 1983
PspN4I GGNNCC 4 cut(s) 153, 693, 1527, 1648
PspPI GGNCC 3 cut(s) 87, 1754, 1815
PspPPI RGGWCCY 1 cut(s) 1754
PstI CTGCAG 1 cut(s) 1294
PsuI RGATCY 6 cut(s) 434, 578, 1056, 1189, 1208, 1525
PvuII CAGCTG 1 cut(s) 1499
RsaI GTAC 5 cut(s) 200, 818, 907, 1037, 2011
RsaNI GTAC 5 cut(s) 199, 817, 906, 1036, 2010
RseI CAYNNNNRTG 1 cut(s) 1095
SalI GTCGAC 1 cut(s) 365
SapI GCTCTTC 2 cut(s) 864, 1913
SaqAI TTAA 9 cut(s) 612, 681, 750, 773, 795, 998, 1197, 1401, 1559
SatI GCNGC 6 cut(s) 1236, 1287, 1290, 1518, 1794, 1924
Sau96I GGNCC 3 cut(s) 87, 1754, 1815
ScaI AGTACT 1 cut(s) 200
SchI GAGTC 4 cut(s) 337, 458, 1319, 2079
ScrFI CCNGG 6 cut(s) 732, 740, 766, 910, 1530, 1985
SduI GDGCHC 3 cut(s) 131, 784, 1540
SfaNI GCATC 5 cut(s) 85, 125, 484, 1997, 2125
SfcI CTRYAG 2 cut(s) 833, 1290
SfuI TTCGAA 1 cut(s) 1178
SinI GGWCC 3 cut(s) 87, 1754, 1815
SmiMI CAYNNNNRTG 1 cut(s) 1095
SmlI CTYRAG 1 cut(s) 749
SmoI CTYRAG 1 cut(s) 749
Sse9I AATT 9 cut(s) 403, 682, 885, 1102, 1180, 1360, 1378, 1452, 1457
SsiI CCGC 5 cut(s) 124, 155, 192, 253, 1395
SspMI CTAG 6 cut(s) 51, 288, 1628, 1775, 1797, 1872
StyD4I CCNGG 6 cut(s) 730, 738, 764, 908, 1528, 1983
StyI CCWWGG 1 cut(s) 2034
TaaI ACNGT 6 cut(s) 163, 371, 678, 1341, 1657, 1972
TaiI ACGT 2 cut(s) 1032, 1413
TaqI TCGA 6 cut(s) 131, 225, 366, 784, 1178, 1444
TaqII GACCGA 1 cut(s) 75
TasI AATT 9 cut(s) 403, 682, 885, 1102, 1180, 1360, 1378, 1452, 1457
TatI WGTACW 4 cut(s) 198, 816, 1035, 2009
TfiI GAWTC 6 cut(s) 133, 547, 629, 735, 1044, 1826
Tru1I TTAA 9 cut(s) 612, 681, 750, 773, 795, 998, 1197, 1401, 1559
Tru9I TTAA 9 cut(s) 612, 681, 750, 773, 795, 998, 1197, 1401, 1559
TscAI CASTG 2 cut(s) 1312, 1814
TseFI GTSAC 3 cut(s) 329, 488, 2129
TseI GCWGC 6 cut(s) 1235, 1286, 1289, 1517, 1793, 1923
Tsp45I GTSAC 3 cut(s) 329, 488, 2129
TspDTI ATGAA 3 cut(s) 879, 989, 1241
TspGWI ACGGA 2 cut(s) 329, 591
TspRI CASTG 2 cut(s) 1312, 1814
Van91I CCANNNNNTGG 1 cut(s) 1000
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 3 cut(s) 87, 1754, 1815
XapI RAATTY 4 cut(s) 403, 1102, 1180, 1457
XbaI TCTAGA 1 cut(s) 50
XceI RCATGY 2 cut(s) 725, 1323
XmiI GTMKAC 2 cut(s) 366, 1336
XmnI GAANNNNTTC 2 cut(s) 404, 1440
XspI CTAG 6 cut(s) 51, 288, 1628, 1775, 1797, 1872
ZraI GACGTC 1 cut(s) 1030
ZrmI AGTACT 1 cut(s) 200
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.