Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010424

Physical Location & Seq

Genomic Coordinates Forward (+)

17177867 .. 17183697

Gene Structure 5831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1192500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGGTGAGGAGGAGAAGCACGACGCTCACCTGGTTTTTCCTCATCTTTCTCTCTCTAATAGCCTTTGGCATCTTTGTCCCTGTCTTTGCTCTTCTACCTCCTCTTTCTTCCCACTCTCCCCACCAACTGCAGCACCATCCCAGCTCCAAAAGGAATCAGGATCATGCCAGAAAGTTTGAAATTTCAGAGGACAAGTTCTGGAAAGATGGTCAGCCTTTCCAGATCATTGGGGGTGACTTGCATTATTTCCGGGTTCTTCCTGAGTACTGGGAAGATAGGTTGTTGAGAGCAAAGGCATTGGGATTAAATACGATTCAAACTTATGTTCCCTGGAACCTACATGAACCAAGAGCTGGTATTTTGGATTTTGACGGTATTGCAGATTTGGTTGCATTTCTCAAACTCTCCCAGAAGCTGGGTATTCTTGTAATGCTTCGACCTGGACCATATATATGTGCAGAGTGGGATTTGGGAGGTTTCCCTCCTTGGTTACTTTCCATCAATCCAGCTCCCAGACTACGATCATCAGATCCCACTTTCCTTCGGTTGGTGGATACATGGTGGGGAATCCTGCTTCCAAAGGTAGCTCCCCTTCTTTATGGAAGTGGAGGTCCTGTTATAATGGTTCAGATTGAAAATGAATTTGGATCATATGGGGACGACAAAGCTTATCTTCACCACTTGGTGTCAGTGGCTAGAAAGCACCTTGGGGAAGATGCAATTTTGTATACTACGGATGGAGGTTCTAGGGAAACACTTGAGAAAGGAACAATTCGTGGAGATGCTGTCTTTTCAGCTGTTGACTTCACTACTGGTGATGATCCTTGGCCTATATTTGAGTTGCAAAAGGAGTTCAATGCCCCCGGGAAATCACCACCACTTTCTTCAGAGTTTTACACAGGCTGGCTTACACATTGGGGAGAGAAGAATGCGCAGACTGATGCTGCTTTTACAGCAGCTGCCTTGAAAAAGATTTTGGAAAGAAATGGTTCTGCAGTGCTTTATATGGCACATGGGGGAACAAACTTTGGGTTTTATAATGGAGCAAATAGTGGTTCAGACGAGTCTGATTACAAGCCCGACCTCACTTCCTATGATTATGATGCACCAATCAGGGAATCTGGGGATGTAAACAATGCAAAATTCAAAGCAATTAGGAGGGTCATAGAGCAACACAGTTTAGGATCTATCCCTGCAGTTCCAGCCGATAATGAGAAGAAAGCATATGGATCCATAAATGTAACTAAAACAGGGACTTTATTTGATATGATCCACTACTTTGATGTGGTTGAATCCGAGAGCCCAATATCTATGGAGTCAGCGGGACAGATGTTCGGATTTATGTTATACGTGACTGAGTATGCTGCAAAAGACAATGGTGGCGGAGTTGTATCCATACCAAAGGTGCACGACAGAGCCCAAGTTTTTGTAACGTGCTCTTCTGAAGATGGTCATGGAAGACCAAAATATGTTGGCACTTTTGAAAGATGGTCAAATCAACCTCTAACCCTTCCTAATATGAAATGTCACTCTAACATCAGCTTATTTGTGTTGGTTGAAAACATGGGCCGTCTAAATTATGGACCATATATCTTTGACAGGAAGGGTATTCTATCTCCTGTTTATCTTGACGGGAGAATTCTCCGAAGATGGAAAATGCATTTGATACCTATAGGAAATCTGAATGAGGTTCCTAAAATCAATCCCATAATTCAGGCTTCACATTCTGGAGTCATTACTATGTCAGCGCGCAAAAGATTAAAACCAAAAAAGTCTGGGAATGATTCGAACGTGCCAGCATTCTATGCTGGATATATTTCTATCAGCAAAGAGGACGAAATCAAAGATACATTCATATCATTGAGTGACTGGGGGAAAGGGATAGTAACTATTAACAATTTCAACATCGGAAGATTTTGGCCGTTAAAGGGACCGCAGTGTAACCTCTATGTTCCCGCTCCTGTCCTTCATCGTGGGAATAATGTTGTGGTCATATTTGAGTTAGAGTCCCCAAACCCGGAGCTTGTGGTACGCTTTGTTGATCAGCCAGACTTCACTTGTGGTCAAGGGAAATCGAATGTGCATCAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00052 ko00511 ko00531 ko00600 ko00604 ko01100 ko04142 map00052 map00511 map00531 map00600 map00604 map01100 map04142

Pfam Domains

Protein Families

BetaGal_dom4_5 Glyco_hydro_35

Protein Analysis

698

Amino Acids

78.03

Weight (kDa)

6.88

Isoelectric Point (pI)

42.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	65 - 391	5.1e-115	Glycosyl hydrolases family 35
BetaGal_ABD_1	PF21317	435 - 555	2.5e-22	Beta-galactosidase, first all-beta domain
BetaGal_gal-bd	PF21467	599 - 661	9.2e-21	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72990 AT1G72990 AT1G72990 AT1G72990
fragaria_vesca	FvH4_6g33540 FvH4_6g33540 FvH4_6g33540
malus_domestica	MD09G1192500.v1.1
prunus_persica	Prupe.3G048800_v2.0.a1 Prupe.3G048800_v2.0.a1
pyrus_communis	pycom09g10910
rosa_chinensis	RchiOBHm_Chr2g0143451
rosa_laevigata	RLG00000020036
rosa_multiflora	Rmu_sc0003507.1_g000021
rosa_roxburghii	Rroxscaffold_2G00101830
rosa_rugosa	Rorug02G0381500
rosa_samantha	Rh2AG434500 Rh2BG442300 Rh2CG420400 Rh2DG452500
rosa_wichuraiana	Rw2G035420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	620, 1038
Acc16I	TGCGCA	1 cut(s)	933
AccB7I	CCANNNNNTGG	2 cut(s)	353, 415
AccBSI	CCGCTC	1 cut(s)	1958
AccI	GTMKAC	1 cut(s)	728
AccII	CGCG	1 cut(s)	1750
AciI	CCGC	4 cut(s)	1322, 1383, 1934, 1956
AclWI	GGATC	8 cut(s)	168, 524, 655, 815, 1192, 1224, 1237, 1264
AcoI	YGGCCR	1 cut(s)	1919
AcsI	RAATTY	4 cut(s)	180, 641, 1142, 1638
AcuI	CTGAAG	2 cut(s)	870, 1464
AdeI	CACNNNGTG	1 cut(s)	685
AfaI	GTAC	2 cut(s)	266, 2031
AfiI	CCNNNNNNNGG	5 cut(s)	353, 415, 547, 1928, 2017
AjnI	CCWGG	3 cut(s)	29, 329, 439
AjuI	GAANNNNNNNTTGG	4 cut(s)	627, 659, 959, 991
Alw21I	GWGCWC	2 cut(s)	1410, 1439
Alw44I	GTGCAC	1 cut(s)	1406
AlwI	GGATC	8 cut(s)	168, 524, 655, 815, 1192, 1224, 1237, 1264
AlwNI	CAGNNNCTG	2 cut(s)	415, 959
Ama87I	CYCGRG	1 cut(s)	863
AoxI	GGCC	3 cut(s)	827, 1567, 1919
ApaLI	GTGCAC	1 cut(s)	1406
ApeKI	GCWGC	5 cut(s)	130, 944, 956, 959, 1364
ApoI	RAATTY	4 cut(s)	180, 641, 1142, 1638
Asp700I	GAANNNNTTC	1 cut(s)	988
AspLEI	GCGC	3 cut(s)	934, 1750, 1752
AspS9I	GGNCC	5 cut(s)	443, 611, 1567, 1583, 1931
AsuC2I	CCSGG	4 cut(s)	251, 864, 865, 2018
AsuHPI	GGTGA	6 cut(s)	16, 19, 245, 668, 827, 864
AsuII	TTCGAA	1 cut(s)	1787
AvaI	CYCGRG	1 cut(s)	863
AvaII	GGWCC	4 cut(s)	443, 611, 1583, 1931
BaeGI	GKGCMC	1 cut(s)	1410
BamHI	GGATCC	1 cut(s)	1229
BanII	GRGCYC	2 cut(s)	1304, 1420
BarI	GAAGNNNNNNTAC	2 cut(s)	576, 608
BbsI	GAAGAC	1 cut(s)	1465
Bbv12I	GWGCWC	2 cut(s)	1410, 1439
BbvI	GCAGC	5 cut(s)	142, 931, 946, 968, 1351
BccI	CCATC	7 cut(s)	144, 200, 506, 731, 1442, 1482, 1644
BceAI	ACGGC	2 cut(s)	1554, 1906
BciT130I	CCWGG	3 cut(s)	31, 331, 441
BciVI	GTATCC	2 cut(s)	547, 1402
BclI	TGATCA	1 cut(s)	2041
BcnI	CCSGG	4 cut(s)	251, 864, 865, 2018
BfaI	CTAG	2 cut(s)	696, 747
BfmI	CTRYAG	4 cut(s)	128, 993, 1194, 1671
BfuI	GTATCC	2 cut(s)	547, 1402
BisI	GCNGC	5 cut(s)	131, 945, 957, 960, 1365
BlsI	GCNGC	5 cut(s)	132, 946, 958, 961, 1366
BmcAI	AGTACT	1 cut(s)	266
Bme1390I	CCNGG	7 cut(s)	31, 251, 331, 441, 864, 865, 2018
Bme18I	GGWCC	4 cut(s)	443, 611, 1583, 1931
BmeT110I	CYCGRG	1 cut(s)	863
BmgT120I	GGNCC	5 cut(s)	443, 611, 1567, 1583, 1931
BmiI	GGNNCC	4 cut(s)	335, 1231, 1692, 1932
BmrFI	CCNGG	7 cut(s)	31, 251, 331, 441, 864, 865, 2018
BmrI	ACTGGG	2 cut(s)	277, 1879
BmsI	GCATC	5 cut(s)	78, 706, 772, 931, 1093
BmuI	ACTGGG	2 cut(s)	277, 1879
BpiI	GAAGAC	1 cut(s)	1465
BpmI	CTGGAG	1 cut(s)	1749
Bpu14I	TTCGAA	1 cut(s)	1787
BpuEI	CTTGAG	1 cut(s)	779
BpuMI	CCSGG	4 cut(s)	251, 864, 865, 2018
BsaAI	YACGTR	1 cut(s)	1351
BsaJI	CCNNGG	6 cut(s)	329, 485, 706, 824, 862, 863
BsaXI	ACNNNNNCTCC	4 cut(s)	600, 630, 771, 801
Bsc4I	CCNNNNNNNGG	5 cut(s)	353, 415, 547, 1928, 2017
Bse1I	ACTGG	3 cut(s)	272, 817, 1874
BseBI	CCWGG	3 cut(s)	31, 331, 441
BseDI	CCNNGG	6 cut(s)	329, 485, 706, 824, 862, 863
BseGI	GGATG	3 cut(s)	136, 742, 1132
BseLI	CCNNNNNNNGG	5 cut(s)	353, 415, 547, 1928, 2017
BseMII	CTCAG	2 cut(s)	252, 1347
BseNI	ACTGG	3 cut(s)	272, 817, 1874
BsePI	GCGCGC	1 cut(s)	1748
BseRI	GAGGAG	3 cut(s)	22, 25, 90
BseSI	GKGCMC	1 cut(s)	1410
BseXI	GCAGC	5 cut(s)	142, 931, 946, 968, 1351
BseYI	CCCAGC	2 cut(s)	140, 415
BsgI	GTGCAG	1 cut(s)	477
Bsh1236I	CGCG	1 cut(s)	1750
BshFI	GGCC	3 cut(s)	829, 1569, 1921
BsiHKAI	GWGCWC	2 cut(s)	1410, 1439
BsiHKCI	CYCGRG	1 cut(s)	863
BsiSI	CCGG	3 cut(s)	250, 864, 2018
BslFI	GGGAC	6 cut(s)	62, 671, 1267, 1338, 1944, 1993
BslI	CCNNNNNNNGG	5 cut(s)	353, 415, 547, 1928, 2017
BsmFI	GGGAC	6 cut(s)	62, 671, 1267, 1338, 1944, 1993
BsmI	GAATGC	2 cut(s)	934, 1799
BsnI	GGCC	3 cut(s)	829, 1569, 1921
BsoBI	CYCGRG	1 cut(s)	863
Bsp119I	TTCGAA	1 cut(s)	1787
Bsp1286I	GDGCHC	4 cut(s)	1304, 1410, 1420, 1439
BspACI	CCGC	4 cut(s)	1322, 1383, 1934, 1956
BspANI	GGCC	3 cut(s)	829, 1569, 1921
BspCNI	CTCAG	2 cut(s)	253, 1348
BspFNI	CGCG	1 cut(s)	1750
BspLI	GGNNCC	4 cut(s)	335, 1231, 1692, 1932
BspMAI	CTGCAG	3 cut(s)	132, 997, 1198
BspPI	GGATC	8 cut(s)	168, 524, 655, 815, 1192, 1224, 1237, 1264
BspQI	GCTCTTC	2 cut(s)	96, 1444
BspT104I	TTCGAA	1 cut(s)	1787
BsrBI	CCGCTC	1 cut(s)	1958
BsrI	ACTGG	3 cut(s)	272, 817, 1874
BssECI	CCNNGG	6 cut(s)	329, 485, 706, 824, 862, 863
BssHII	GCGCGC	1 cut(s)	1748
BssNAI	GTATAC	1 cut(s)	729
BssT1I	CCWWGG	3 cut(s)	485, 706, 824
Bst1107I	GTATAC	1 cut(s)	729
Bst2UI	CCWGG	3 cut(s)	31, 331, 441
Bst4CI	ACNGT	2 cut(s)	374, 1178
Bst6I	CTCTTC	2 cut(s)	96, 1444
BstAPI	GCANNNNNTGC	1 cut(s)	1805
BstBAI	YACGTR	1 cut(s)	1351
BstBI	TTCGAA	1 cut(s)	1787
BstC8I	GCNNGC	3 cut(s)	905, 1750, 1797
BstDEI	CTNAG	2 cut(s)	261, 1356
BstF5I	GGATG	3 cut(s)	136, 742, 1132
BstFNI	CGCG	1 cut(s)	1750
BstHHI	GCGC	3 cut(s)	934, 1750, 1752
BstMWI	GCNNNNNNNGC	3 cut(s)	953, 1202, 1805
BstNI	CCWGG	3 cut(s)	31, 331, 441
BstSCI	CCNGG	7 cut(s)	29, 249, 329, 439, 862, 863, 2016
BstSFI	CTRYAG	4 cut(s)	128, 993, 1194, 1671
BstSLI	GKGCMC	1 cut(s)	1410
BstUI	CGCG	1 cut(s)	1750
BstV1I	GCAGC	5 cut(s)	142, 931, 946, 968, 1351
BstV2I	GAAGAC	1 cut(s)	1465
BstX2I	RGATCY	3 cut(s)	529, 1184, 1229
BstXI	CCANNNNNNTGG	1 cut(s)	227
BstYI	RGATCY	3 cut(s)	529, 1184, 1229
BstZ17I	GTATAC	1 cut(s)	729
BsuI	GTATCC	2 cut(s)	547, 1402
BsuRI	GGCC	3 cut(s)	829, 1569, 1921
BtsCI	GGATG	3 cut(s)	136, 742, 1132
BtsI	GCAGTG	2 cut(s)	1002, 1943
BtsIMutI	CAGTG	3 cut(s)	696, 1002, 1943
Cac8I	GCNNGC	3 cut(s)	905, 1750, 1797
CaiI	CAGNNNCTG	2 cut(s)	415, 959
CfoI	GCGC	3 cut(s)	934, 1750, 1752
Cfr13I	GGNCC	5 cut(s)	443, 611, 1567, 1583, 1931
Cfr9I	CCCGGG	1 cut(s)	863
CseI	GACGC	1 cut(s)	31
CsiI	ACCWGGT	1 cut(s)	29
Csp6I	GTAC	2 cut(s)	265, 2030
CviAII	CATG	6 cut(s)	164, 341, 558, 1013, 1454, 1564
CviQI	GTAC	2 cut(s)	265, 2030
DdeI	CTNAG	2 cut(s)	261, 1356
DraIII	CACNNNGTG	1 cut(s)	685
EaeI	YGGCCR	1 cut(s)	1919
Eam1104I	CTCTTC	2 cut(s)	96, 1444
EarI	CTCTTC	2 cut(s)	96, 1444
EciI	GGCGGA	1 cut(s)	1398
Eco130I	CCWWGG	3 cut(s)	485, 706, 824
Eco24I	GRGCYC	2 cut(s)	1304, 1420
Eco47I	GGWCC	4 cut(s)	443, 611, 1583, 1931
Eco57I	CTGAAG	2 cut(s)	870, 1464
Eco88I	CYCGRG	1 cut(s)	863
EcoO109I	RGGNCCY	1 cut(s)	611
EcoRI	GAATTC	1 cut(s)	1638
EcoRII	CCWGG	3 cut(s)	29, 329, 439
EcoT14I	CCWWGG	3 cut(s)	485, 706, 824
EcoT22I	ATGCAT	1 cut(s)	1662
EcoT38I	GRGCYC	2 cut(s)	1304, 1420
ErhI	CCWWGG	3 cut(s)	485, 706, 824
FaeI	CATG	6 cut(s)	167, 344, 561, 1016, 1457, 1567
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FaqI	GGGAC	6 cut(s)	62, 671, 1267, 1338, 1944, 1993
FatI	CATG	6 cut(s)	163, 340, 557, 1012, 1453, 1563
FauI	CCCGC	2 cut(s)	1315, 1963
FauNDI	CATATG	2 cut(s)	652, 1225
FbaI	TGATCA	1 cut(s)	2041
FblI	GTMKAC	1 cut(s)	728
Fnu4HI	GCNGC	5 cut(s)	131, 945, 957, 960, 1365
FokI	GGATG	3 cut(s)	123, 749, 1139
FriOI	GRGCYC	2 cut(s)	1304, 1420
Fsp4HI	GCNGC	5 cut(s)	131, 945, 957, 960, 1365
FspBI	CTAG	2 cut(s)	696, 747
FspI	TGCGCA	1 cut(s)	933
GlaI	GCGC	3 cut(s)	933, 1749, 1751
GluI	GCNGC	5 cut(s)	131, 945, 957, 960, 1365
GsaI	CCCAGC	2 cut(s)	144, 419
GsuI	CTGGAG	1 cut(s)	1749
HaeIII	GGCC	3 cut(s)	829, 1569, 1921
HapII	CCGG	3 cut(s)	250, 864, 2018
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	3 cut(s)	934, 1750, 1752
Hin1II	CATG	6 cut(s)	167, 344, 561, 1016, 1457, 1567
Hin6I	GCGC	3 cut(s)	932, 1748, 1750
HinP1I	GCGC	3 cut(s)	932, 1748, 1750
HincII	GTYRAC	1 cut(s)	802
HindII	GTYRAC	1 cut(s)	802
HindIII	AAGCTT	1 cut(s)	666
HpaII	CCGG	3 cut(s)	250, 864, 2018
HphI	GGTGA	6 cut(s)	16, 19, 245, 668, 827, 864
Hpy166II	GTNNAC	4 cut(s)	729, 802, 1132, 1408
Hpy188III	TCNNGA	6 cut(s)	158, 199, 220, 260, 1628, 1728
Hpy8I	GTNNAC	4 cut(s)	729, 802, 1132, 1408
Hpy99I	CGWCG	1 cut(s)	25
HpyAV	CCTTC	5 cut(s)	551, 602, 1520, 1597, 1976
HpyCH4III	ACNGT	2 cut(s)	374, 1178
HpyCH4IV	ACGT	3 cut(s)	1350, 1433, 1791
HpyF10VI	GCNNNNNNNGC	3 cut(s)	953, 1202, 1805
HpyF3I	CTNAG	2 cut(s)	261, 1356
HpySE526I	ACGT	3 cut(s)	1350, 1433, 1791
Hsp92II	CATG	6 cut(s)	167, 344, 561, 1016, 1457, 1567
HspAI	GCGC	3 cut(s)	932, 1748, 1750
Ksp22I	TGATCA	1 cut(s)	2041
LguI	GCTCTTC	2 cut(s)	96, 1444
LmnI	GCTCC	6 cut(s)	149, 514, 592, 1043, 1963, 2020
Lsp1109I	GCAGC	5 cut(s)	142, 931, 946, 968, 1351
LweI	GCATC	5 cut(s)	78, 706, 772, 931, 1093
MabI	ACCWGGT	1 cut(s)	29
MaeI	CTAG	2 cut(s)	696, 747
MaeII	ACGT	3 cut(s)	1350, 1433, 1791
MaeIII	GTNAC	9 cut(s)	233, 489, 1240, 1351, 1429, 1526, 1865, 1885, 1940
MbiI	CCGCTC	1 cut(s)	1958
MflI	RGATCY	3 cut(s)	529, 1184, 1229
MhlI	GDGCHC	4 cut(s)	1304, 1410, 1420, 1439
MlyI	GAGTC	4 cut(s)	1073, 1325, 1740, 2015
Mph1103I	ATGCAT	1 cut(s)	1662
MroXI	GAANNNNTTC	1 cut(s)	988
MseI	TTAA	4 cut(s)	305, 1760, 1893, 1925
MslI	CAYNNNNRTG	2 cut(s)	451, 1739
MspA1I	CMGCKG	3 cut(s)	797, 959, 1322
MspI	CCGG	3 cut(s)	250, 864, 2018
MspR9I	CCNGG	7 cut(s)	31, 251, 331, 441, 864, 865, 2018
Mva1269I	GAATGC	2 cut(s)	934, 1799
MvaI	CCWGG	3 cut(s)	31, 331, 441
MvnI	CGCG	1 cut(s)	1750
MwoI	GCNNNNNNNGC	3 cut(s)	953, 1202, 1805
NciI	CCSGG	4 cut(s)	251, 864, 865, 2018
NdeI	CATATG	2 cut(s)	652, 1225
NlaIII	CATG	6 cut(s)	167, 344, 561, 1016, 1457, 1567
NlaIV	GGNNCC	4 cut(s)	335, 1231, 1692, 1932
NmuCI	GTSAC	4 cut(s)	233, 1351, 1526, 1865
NsbI	TGCGCA	1 cut(s)	933
NsiI	ATGCAT	1 cut(s)	1662
NspV	TTCGAA	1 cut(s)	1787
PauI	GCGCGC	1 cut(s)	1748
PciSI	GCTCTTC	2 cut(s)	96, 1444
PctI	GAATGC	2 cut(s)	934, 1799
PdmI	GAANNNNTTC	1 cut(s)	988
PfeI	GAWTC	6 cut(s)	154, 313, 567, 1118, 1292, 1784
PflMI	CCANNNNNTGG	2 cut(s)	353, 415
PkrI	GCNGC	5 cut(s)	132, 946, 958, 961, 1366
PleI	GAGTC	4 cut(s)	1072, 1324, 1739, 2014
PpsI	GAGTC	4 cut(s)	1072, 1324, 1739, 2014
Ppu21I	YACGTR	1 cut(s)	1351
PpuMI	RGGWCCY	1 cut(s)	611
PsiI	TTATAA	2 cut(s)	620, 1038
Psp5II	RGGWCCY	1 cut(s)	611
Psp6I	CCWGG	3 cut(s)	29, 329, 439
PspFI	CCCAGC	2 cut(s)	140, 415
PspGI	CCWGG	3 cut(s)	29, 329, 439
PspN4I	GGNNCC	4 cut(s)	335, 1231, 1692, 1932
PspPI	GGNCC	5 cut(s)	443, 611, 1567, 1583, 1931
PspPPI	RGGWCCY	1 cut(s)	611
PstI	CTGCAG	3 cut(s)	132, 997, 1198
PstNI	CAGNNNCTG	2 cut(s)	415, 959
PsuI	RGATCY	3 cut(s)	529, 1184, 1229
PteI	GCGCGC	1 cut(s)	1748
PvuII	CAGCTG	2 cut(s)	797, 959
RsaI	GTAC	2 cut(s)	266, 2031
RsaNI	GTAC	2 cut(s)	265, 2030
RseI	CAYNNNNRTG	2 cut(s)	451, 1739
SapI	GCTCTTC	2 cut(s)	96, 1444
SaqAI	TTAA	4 cut(s)	305, 1760, 1893, 1925
SatI	GCNGC	5 cut(s)	131, 945, 957, 960, 1365
Sau96I	GGNCC	5 cut(s)	443, 611, 1567, 1583, 1931
ScaI	AGTACT	1 cut(s)	266
SchI	GAGTC	4 cut(s)	1073, 1325, 1740, 2015
ScrFI	CCNGG	7 cut(s)	31, 251, 331, 441, 864, 865, 2018
SduI	GDGCHC	4 cut(s)	1304, 1410, 1420, 1439
SexAI	ACCWGGT	1 cut(s)	29
SfaNI	GCATC	5 cut(s)	78, 706, 772, 931, 1093
SfcI	CTRYAG	4 cut(s)	128, 993, 1194, 1671
SfuI	TTCGAA	1 cut(s)	1787
SinI	GGWCC	4 cut(s)	443, 611, 1583, 1931
SmaI	CCCGGG	1 cut(s)	865
SmiMI	CAYNNNNRTG	2 cut(s)	451, 1739
SmlI	CTYRAG	1 cut(s)	758
SmoI	CTYRAG	1 cut(s)	758
SsiI	CCGC	4 cut(s)	1322, 1383, 1934, 1956
SspMI	CTAG	2 cut(s)	696, 747
StyD4I	CCNGG	7 cut(s)	29, 249, 329, 439, 862, 863, 2016
StyI	CCWWGG	3 cut(s)	485, 706, 824
TaaI	ACNGT	2 cut(s)	374, 1178
TaiI	ACGT	3 cut(s)	1353, 1436, 1794
TaqI	TCGA	3 cut(s)	436, 1787, 2075
TatI	WGTACW	1 cut(s)	264
TfiI	GAWTC	6 cut(s)	154, 313, 567, 1118, 1292, 1784
Tru1I	TTAA	4 cut(s)	305, 1760, 1893, 1925
Tru9I	TTAA	4 cut(s)	305, 1760, 1893, 1925
TscAI	CASTG	3 cut(s)	696, 1002, 1943
TseFI	GTSAC	4 cut(s)	233, 1351, 1526, 1865
TseI	GCWGC	5 cut(s)	130, 944, 956, 959, 1364
Tsp45I	GTSAC	4 cut(s)	233, 1351, 1526, 1865
TspDTI	ATGAA	5 cut(s)	357, 654, 1535, 1843, 1958
TspGWI	ACGGA	1 cut(s)	749
TspMI	CCCGGG	1 cut(s)	863
TspRI	CASTG	3 cut(s)	696, 1002, 1943
Van91I	CCANNNNNTGG	2 cut(s)	353, 415
VneI	GTGCAC	1 cut(s)	1406
VpaK11BI	GGWCC	4 cut(s)	443, 611, 1583, 1931
XapI	RAATTY	4 cut(s)	180, 641, 1142, 1638
XmaI	CCCGGG	1 cut(s)	863
XmiI	GTMKAC	1 cut(s)	728
XmnI	GAANNNNTTC	1 cut(s)	988
XspI	CTAG	2 cut(s)	696, 747
ZrmI	AGTACT	1 cut(s)	266
Zsp2I	ATGCAT	1 cut(s)	1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.