MD09G1291900.v1.1

Inositol hexakisphosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0004750
Physical Location & Seq
Reverse (-)
37433652 .. 37439969
6318 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1291900.v1.1.491

Sequence Viewer

Length: 573 bp
ATGAAAGATGAGGGTTATAATTTTGCATACAGGAGAATACCATTAACTAGAGAAAGAGAGGCTTTATCTTCTGATGTGGATGCAATTCAATACTGCATAGATGATTCTGCAGGGTGTTACCTTTTCGTATCACACACAGGGTTTGGAGCAGTTGCATATGCAATGGCTATTATTTGTATCAGAACTGGTGCAGAAACAAACTCCCTACCAAAGGATCCACAACCATTGGTTAGAATGAACCTGTTGTGTACACCTAAAGAGGATTTGCCTTCTCGAGCTTCTGATGAAGAAGCTCTGGGGATGGGTGACTACCGAGACATACTAAGCCTAACAAGAGTTCTTGTATATGGTCCTAAGAGCAAAGCAGACATTGACATTGTTATTGAAAGGTGTGCAGGTGCGTGGCATCTGCGAGATGAGATTCTTTATTATAGTAGGGAACTCAAGAAGTTCCCTGATGCTGAGGATGAGCAACGAGCATATCTCATGGACATGGGGATCAAAGCGTTAAGGCGGTACTTTTTCCATATAACATTTAGTCCTACCTCTACCGCACTTCTGCGGCTGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTPlike_phytase

Protein Analysis

191

Amino Acids

21.61

Weight (kDa)

5.45

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTPlike_phytase PF14566 2 - 60 3.3e-07 Inositol hexakisphosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 18
AarI CACCTGC 1 cut(s) 386
Acc36I ACCTGC 1 cut(s) 386
AciI CCGC 3 cut(s) 514, 552, 562
AclWI GGATC 3 cut(s) 209, 222, 506
AfaI GTAC 2 cut(s) 250, 518
AfiI CCNNNNNNNGG 1 cut(s) 211
AgsI TTSAA 2 cut(s) 89, 386
AluBI AGCT 2 cut(s) 278, 293
AluI AGCT 2 cut(s) 278, 293
Alw26I GTCTC 1 cut(s) 309
AlwI GGATC 3 cut(s) 209, 222, 506
Ama87I CYCGRG 1 cut(s) 273
AspS9I GGNCC 1 cut(s) 350
AsuHPI GGTGA 1 cut(s) 317
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 1 cut(s) 350
BamHI GGATCC 1 cut(s) 214
BbvCI CCTCAGC 1 cut(s) 462
BccI CCATC 1 cut(s) 295
BcoDI GTCTC 1 cut(s) 309
BfaI CTAG 1 cut(s) 48
BfmI CTRYAG 1 cut(s) 108
BfuAI ACCTGC 1 cut(s) 386
BisI GCNGC 1 cut(s) 563
BlsI GCNGC 1 cut(s) 564
Bme18I GGWCC 1 cut(s) 350
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 1 cut(s) 350
BmiI GGNNCC 1 cut(s) 216
BmsI GCATC 3 cut(s) 70, 415, 448
BplI GAGNNNNNCTC 2 cut(s) 468, 500
Bpu10I CCTNAGC 1 cut(s) 462
BpuEI CTTGAG 1 cut(s) 428
Bsc4I CCNNNNNNNGG 1 cut(s) 211
Bse1I ACTGG 1 cut(s) 190
Bse3DI GCAATG 1 cut(s) 168
BseGI GGATG 3 cut(s) 85, 306, 472
BseLI CCNNNNNNNGG 1 cut(s) 211
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 1 cut(s) 453
BseNI ACTGG 1 cut(s) 190
BsgI GTGCAG 2 cut(s) 210, 414
BsiHKCI CYCGRG 1 cut(s) 273
BslI CCNNNNNNNGG 1 cut(s) 211
BsmAI GTCTC 1 cut(s) 309
BsoBI CYCGRG 1 cut(s) 273
Bsp1407I TGTACA 1 cut(s) 248
Bsp143I GATC 2 cut(s) 214, 498
BspACI CCGC 3 cut(s) 514, 552, 562
BspCNI CTCAG 1 cut(s) 454
BspLI GGNNCC 1 cut(s) 216
BspMAI CTGCAG 1 cut(s) 112
BspMI ACCTGC 1 cut(s) 386
BspPI GGATC 3 cut(s) 209, 222, 506
BsrDI GCAATG 1 cut(s) 168
BsrGI TGTACA 1 cut(s) 248
BsrI ACTGG 1 cut(s) 190
BssMI GATC 2 cut(s) 214, 498
BstAUI TGTACA 1 cut(s) 248
BstDEI CTNAG 3 cut(s) 323, 354, 462
BstENI CCTNNNNNAGG 1 cut(s) 209
BstF5I GGATG 3 cut(s) 85, 306, 472
BstKTI GATC 2 cut(s) 217, 501
BstMAI GTCTC 1 cut(s) 309
BstMBI GATC 2 cut(s) 214, 498
BstSFI CTRYAG 1 cut(s) 108
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
BtsCI GGATG 3 cut(s) 85, 306, 472
BveI ACCTGC 1 cut(s) 386
Cfr13I GGNCC 1 cut(s) 350
Csp6I GTAC 2 cut(s) 249, 517
CspCI CAANNNNNGTGG 2 cut(s) 207, 242
CviAII CATG 2 cut(s) 487, 493
CviJI RGCY 6 cut(s) 62, 167, 278, 293, 327, 565
CviKI_1 RGCY 6 cut(s) 62, 167, 278, 293, 327, 565
CviQI GTAC 2 cut(s) 249, 517
DdeI CTNAG 3 cut(s) 323, 354, 462
DpnI GATC 2 cut(s) 216, 500
DpnII GATC 2 cut(s) 214, 498
Eco47I GGWCC 1 cut(s) 350
Eco88I CYCGRG 1 cut(s) 273
EcoNI CCTNNNNNAGG 1 cut(s) 209
FaeI CATG 2 cut(s) 490, 496
FalI AAGNNNNNCTT 2 cut(s) 46, 78
FatI CATG 2 cut(s) 486, 492
FauNDI CATATG 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 563
FokI GGATG 3 cut(s) 92, 313, 479
Fsp4HI GCNGC 1 cut(s) 563
FspBI CTAG 1 cut(s) 48
GluI GCNGC 1 cut(s) 563
Hin1II CATG 2 cut(s) 490, 496
HinfI GANTC 2 cut(s) 104, 421
HphI GGTGA 1 cut(s) 317
Hpy166II GTNNAC 2 cut(s) 249, 251
Hpy188I TCNGA 3 cut(s) 73, 182, 283
Hpy188III TCNNGA 2 cut(s) 273, 445
Hpy8I GTNNAC 2 cut(s) 249, 251
HpyAV CCTTC 1 cut(s) 279
HpyCH4V TGCA 8 cut(s) 26, 83, 96, 110, 155, 161, 191, 395
HpyF3I CTNAG 3 cut(s) 323, 354, 462
Hsp92II CATG 2 cut(s) 490, 496
Kzo9I GATC 2 cut(s) 214, 498
LmnI GCTCC 1 cut(s) 146
LpnPI CCDG 8 cut(s) 16, 96, 123, 171, 254, 281, 381, 468
LweI GCATC 3 cut(s) 70, 415, 448
MaeI CTAG 1 cut(s) 48
MaeIII GTNAC 2 cut(s) 116, 305
MalI GATC 2 cut(s) 216, 500
MboI GATC 2 cut(s) 214, 498
MboII GAAGA 2 cut(s) 60, 299
MflI RGATCY 1 cut(s) 214
MluCI AATT 2 cut(s) 19, 84
MnlI CCTC 5 cut(s) 4, 52, 253, 457, 556
MseI TTAA 2 cut(s) 44, 509
MslI CAYNNNNRTG 1 cut(s) 491
NdeI CATATG 1 cut(s) 157
NdeII GATC 2 cut(s) 214, 498
NlaIII CATG 2 cut(s) 490, 496
NlaIV GGNNCC 1 cut(s) 216
NmuCI GTSAC 1 cut(s) 305
PaeR7I CTCGAG 1 cut(s) 273
PaqCI CACCTGC 1 cut(s) 386
PfeI GAWTC 2 cut(s) 104, 421
PkrI GCNGC 1 cut(s) 564
PsiI TTATAA 1 cut(s) 18
PspN4I GGNNCC 1 cut(s) 216
PspPI GGNCC 1 cut(s) 350
PstI CTGCAG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 214
RsaI GTAC 2 cut(s) 250, 518
RsaNI GTAC 2 cut(s) 249, 517
RseI CAYNNNNRTG 1 cut(s) 491
SaqAI TTAA 2 cut(s) 44, 509
SatI GCNGC 1 cut(s) 563
Sau3AI GATC 2 cut(s) 214, 498
Sau96I GGNCC 1 cut(s) 350
SetI ASST 8 cut(s) 123, 243, 256, 280, 295, 392, 400, 548
SfaNI GCATC 3 cut(s) 70, 415, 448
SfcI CTRYAG 1 cut(s) 108
Sfr274I CTCGAG 1 cut(s) 273
SinI GGWCC 1 cut(s) 350
SlaI CTCGAG 1 cut(s) 273
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 2 cut(s) 273, 443
SmoI CTYRAG 2 cut(s) 273, 443
Sse9I AATT 2 cut(s) 19, 84
SsiI CCGC 3 cut(s) 514, 552, 562
SspMI CTAG 1 cut(s) 48
TaqI TCGA 1 cut(s) 274
TasI AATT 2 cut(s) 19, 84
TatI WGTACW 1 cut(s) 248
TauI GCSGC 1 cut(s) 565
TfiI GAWTC 2 cut(s) 104, 421
Tru1I TTAA 2 cut(s) 44, 509
Tru9I TTAA 2 cut(s) 44, 509
TseFI GTSAC 1 cut(s) 305
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 3 cut(s) 17, 251, 300
VpaK11BI GGWCC 1 cut(s) 350
XagI CCTNNNNNAGG 1 cut(s) 209
XhoI CTCGAG 1 cut(s) 273
XspI CTAG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.