Rorug03G0218500

Inositol hexakisphosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0004750
Physical Location & Seq
Reverse (-)
19941089 .. 19942138
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0218500.1

Sequence Viewer

Length: 729 bp
ATGGCGTCATTGGAGGCTCGAGATCCTACCAGGCTTCACCAAGACTCGGCGCGTGTGTCTCTAGGCTCGGCATGGCTTACAGCTTTGATGTTGGCGATCGGTCTGTTTTTCAATTTGAGCGTGAATCTGAATGTAGTAAGATACTGCATGGAGGACCCTGGTTCTATAGAAATACTATGTTGTGCTTGGAGAATACGATGGAATAGGATCAGTGGCGGACGTCCCTCTGAATCTGTTGGAGACTTAGCACTACACCGAAAAGAAGAAGAACAAAGGATTCGTCTGGTGTTTGATGTCAAGAGGCGGGTTAGGGTTTGGAAGCTTTTTGAGTTCTCGCCGGTGGTAGTGCCGGAGCTGTCATTTATCTTTGAAAAGAGTCCGGCTAGGACGGAGGAGATCTCAAAGCAAGTAGCTTCGGCGATGCTGCAATTGATGGTACCGGATCGGCCTAGGGTCGGGGGTGTACAGAACCTAGTGGAAAGTACTTTGCCGTCATTGGAGACATCAGTGGTAGGTAAGGGTATGCATCGGGCCACTCTGTTTGAGGGTCTTAATCTATTGGCTTTTCTTGAGAGTTGGAAAACTCAGCTGGTTTCCCACACCGGACAAGTGAGTGGAGGCAGTACGCTTTTCAGTACCTGTAGGGGCGTAGCCACGTTCAGACCTGAAGTGGCCATGGCACCCCCAAGTACTGCAAATATGTTAAAATGGAGGCTTGAGTTCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTPlike_phytase

Protein Analysis

242

Amino Acids

27.12

Weight (kDa)

9.26

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 727
AatII GACGTC 1 cut(s) 223
Acc65I GGTACC 1 cut(s) 436
AccB1I GGYRCC 2 cut(s) 436, 679
AccII CGCG 1 cut(s) 52
AciI CCGC 2 cut(s) 216, 304
AclWI GGATC 3 cut(s) 17, 215, 450
AcoI YGGCCR 1 cut(s) 672
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 2 cut(s) 5, 220
AfaI GTAC 6 cut(s) 438, 465, 484, 625, 637, 691
AfiI CCNNNNNNNGG 2 cut(s) 46, 455
AgsI TTSAA 2 cut(s) 112, 371
AjnI CCWGG 2 cut(s) 29, 157
AluBI AGCT 5 cut(s) 83, 322, 355, 413, 589
AluI AGCT 5 cut(s) 83, 322, 355, 413, 589
Alw26I GTCTC 3 cut(s) 63, 234, 494
AlwI GGATC 3 cut(s) 17, 215, 450
AlwNI CAGNNNCTG 1 cut(s) 639
Ama87I CYCGRG 1 cut(s) 18
AoxI GGCC 3 cut(s) 446, 531, 672
ApeKI GCWGC 1 cut(s) 424
ArsI GACNNNNNNTTYG 2 cut(s) 265, 297
Asp718I GGTACC 1 cut(s) 436
AspA2I CCTAGG 1 cut(s) 449
AspLEI GCGC 1 cut(s) 52
AspS9I GGNCC 2 cut(s) 154, 531
AsuHPI GGTGA 1 cut(s) 29
AvaI CYCGRG 1 cut(s) 18
AvaII GGWCC 1 cut(s) 154
AvrII CCTAGG 1 cut(s) 449
BalI TGGCCA 1 cut(s) 674
BanI GGYRCC 2 cut(s) 436, 679
BbvI GCAGC 1 cut(s) 411
BccI CCATC 2 cut(s) 192, 427
BceAI ACGGC 1 cut(s) 475
BciT130I CCWGG 2 cut(s) 31, 159
BcoDI GTCTC 3 cut(s) 63, 234, 494
BfaI CTAG 4 cut(s) 62, 384, 450, 473
BfmI CTRYAG 2 cut(s) 165, 640
BglII AGATCT 1 cut(s) 396
BisI GCNGC 1 cut(s) 425
BlnI CCTAGG 1 cut(s) 449
BlsI GCNGC 1 cut(s) 426
BmcAI AGTACT 2 cut(s) 484, 691
Bme1390I CCNGG 2 cut(s) 31, 159
Bme18I GGWCC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 18
BmgT120I GGNCC 2 cut(s) 154, 531
BmiI GGNNCC 3 cut(s) 156, 438, 681
BmrFI CCNGG 2 cut(s) 31, 159
BmsI GCATC 2 cut(s) 411, 535
BplI GAGNNNNNCTC 2 cut(s) 383, 415
BpuEI CTTGAG 1 cut(s) 590
BsaHI GRCGYC 2 cut(s) 5, 220
BsaJI CCNNGG 3 cut(s) 157, 449, 675
BsaWI WCCGGW 2 cut(s) 439, 602
Bsc4I CCNNNNNNNGG 2 cut(s) 46, 455
Bse118I RCCGGY 1 cut(s) 337
BseBI CCWGG 2 cut(s) 31, 159
BseDI CCNNGG 3 cut(s) 157, 449, 675
BseLI CCNNNNNNNGG 2 cut(s) 46, 455
BseMII CTCAG 1 cut(s) 599
BseRI GAGGAG 1 cut(s) 407
BseXI GCAGC 1 cut(s) 411
Bsh1236I CGCG 1 cut(s) 52
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 3 cut(s) 448, 533, 674
BshNI GGYRCC 2 cut(s) 436, 679
BsiEI CGRYCG 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 18
BsiSI CCGG 5 cut(s) 338, 350, 380, 440, 603
BslFI GGGAC 1 cut(s) 207
BslI CCNNNNNNNGG 2 cut(s) 46, 455
BsmAI GTCTC 3 cut(s) 63, 234, 494
BsmFI GGGAC 1 cut(s) 207
BsnI GGCC 3 cut(s) 448, 533, 674
BsoBI CYCGRG 1 cut(s) 18
Bsp1407I TGTACA 1 cut(s) 463
Bsp143I GATC 5 cut(s) 22, 96, 207, 396, 442
Bsp19I CCATGG 1 cut(s) 675
BspACI CCGC 2 cut(s) 216, 304
BspANI GGCC 3 cut(s) 448, 533, 674
BspCNI CTCAG 1 cut(s) 598
BspFNI CGCG 1 cut(s) 52
BspLI GGNNCC 3 cut(s) 156, 438, 681
BspPI GGATC 3 cut(s) 17, 215, 450
BspT107I GGYRCC 2 cut(s) 436, 679
BsrFI RCCGGY 1 cut(s) 337
BsrGI TGTACA 1 cut(s) 463
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 3 cut(s) 157, 449, 675
BssMI GATC 5 cut(s) 22, 96, 207, 396, 442
BssNI GRCGYC 2 cut(s) 5, 220
BssT1I CCWWGG 2 cut(s) 449, 675
Bst2UI CCWGG 2 cut(s) 31, 159
BstACI GRCGYC 2 cut(s) 5, 220
BstAUI TGTACA 1 cut(s) 463
BstDEI CTNAG 2 cut(s) 244, 585
BstDSI CCRYGG 1 cut(s) 675
BstFNI CGCG 1 cut(s) 52
BstHHI GCGC 1 cut(s) 52
BstKTI GATC 5 cut(s) 25, 99, 210, 399, 445
BstMAI GTCTC 3 cut(s) 63, 234, 494
BstMBI GATC 5 cut(s) 22, 96, 207, 396, 442
BstMCI CGRYCG 1 cut(s) 99
BstNI CCWGG 2 cut(s) 31, 159
BstSCI CCNGG 2 cut(s) 29, 157
BstSFI CTRYAG 2 cut(s) 165, 640
BstUI CGCG 1 cut(s) 52
BstV1I GCAGC 1 cut(s) 411
BstX2I RGATCY 2 cut(s) 22, 396
BstYI RGATCY 2 cut(s) 22, 396
BsuRI GGCC 3 cut(s) 448, 533, 674
BtgI CCRYGG 1 cut(s) 675
BtgZI GCGATG 1 cut(s) 434
BtsIMutI CAGTG 2 cut(s) 217, 513
CaiI CAGNNNCTG 1 cut(s) 639
CfoI GCGC 1 cut(s) 52
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 2 cut(s) 154, 531
Csp6I GTAC 6 cut(s) 437, 464, 483, 624, 636, 690
CspCI CAANNNNNGTGG 2 cut(s) 523, 558
CviAII CATG 3 cut(s) 72, 148, 676
CviQI GTAC 6 cut(s) 437, 464, 483, 624, 636, 690
DdeI CTNAG 2 cut(s) 244, 585
DpnI GATC 5 cut(s) 24, 98, 209, 398, 444
DpnII GATC 5 cut(s) 22, 96, 207, 396, 442
EaeI YGGCCR 1 cut(s) 672
EciI GGCGGA 1 cut(s) 231
Eco130I CCWWGG 2 cut(s) 449, 675
Eco47I GGWCC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 687
Eco88I CYCGRG 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 154
EcoRII CCWGG 2 cut(s) 29, 157
EcoT14I CCWWGG 2 cut(s) 449, 675
EcoT22I ATGCAT 1 cut(s) 528
ErhI CCWWGG 2 cut(s) 449, 675
FaeI CATG 3 cut(s) 75, 151, 679
FaiI YATR 8 cut(s) 73, 149, 167, 178, 524, 677, 701, 727
FaqI GGGAC 1 cut(s) 207
FatI CATG 3 cut(s) 71, 147, 675
FauI CCCGC 1 cut(s) 297
Fnu4HI GCNGC 1 cut(s) 425
Fsp4HI GCNGC 1 cut(s) 425
FspBI CTAG 4 cut(s) 62, 384, 450, 473
GlaI GCGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 425
HaeIII GGCC 3 cut(s) 448, 533, 674
HapII CCGG 5 cut(s) 338, 350, 380, 440, 603
HhaI GCGC 1 cut(s) 52
Hin1I GRCGYC 2 cut(s) 5, 220
Hin1II CATG 3 cut(s) 75, 151, 679
Hin6I GCGC 1 cut(s) 50
HinP1I GCGC 1 cut(s) 50
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 5 cut(s) 44, 124, 230, 277, 376
HpaII CCGG 5 cut(s) 338, 350, 380, 440, 603
HphI GGTGA 1 cut(s) 29
Hpy166II GTNNAC 1 cut(s) 464
Hpy188I TCNGA 3 cut(s) 129, 229, 662
Hpy188III TCNNGA 3 cut(s) 20, 298, 569
Hpy8I GTNNAC 1 cut(s) 464
HpyCH4IV ACGT 2 cut(s) 220, 656
HpyCH4V TGCA 4 cut(s) 147, 427, 526, 695
HpyF3I CTNAG 2 cut(s) 244, 585
HpySE526I ACGT 2 cut(s) 220, 656
Hsp92I GRCGYC 2 cut(s) 5, 220
Hsp92II CATG 3 cut(s) 75, 151, 679
HspAI GCGC 1 cut(s) 50
KpnI GGTACC 1 cut(s) 440
Kzo9I GATC 5 cut(s) 22, 96, 207, 396, 442
LmnI GCTCC 1 cut(s) 352
Lsp1109I GCAGC 1 cut(s) 411
LweI GCATC 2 cut(s) 411, 535
MaeI CTAG 4 cut(s) 62, 384, 450, 473
MaeII ACGT 2 cut(s) 220, 656
MalI GATC 5 cut(s) 24, 98, 209, 398, 444
MboI GATC 5 cut(s) 22, 96, 207, 396, 442
MboII GAAGA 2 cut(s) 275, 278
MfeI CAATTG 1 cut(s) 428
MflI RGATCY 2 cut(s) 22, 396
MlsI TGGCCA 1 cut(s) 674
MluCI AATT 2 cut(s) 112, 428
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 2 cut(s) 38, 385
MmeI TCCRAC 2 cut(s) 217, 557
MnlI CCTC 8 cut(s) 7, 145, 235, 294, 385, 538, 611, 705
Mox20I TGGCCA 1 cut(s) 674
Mph1103I ATGCAT 1 cut(s) 528
MscI TGGCCA 1 cut(s) 674
MseI TTAA 2 cut(s) 552, 704
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 1 cut(s) 589
MspI CCGG 5 cut(s) 338, 350, 380, 440, 603
MspR9I CCNGG 2 cut(s) 31, 159
MunI CAATTG 1 cut(s) 428
MvaI CCWGG 2 cut(s) 31, 159
MvnI CGCG 1 cut(s) 52
NcoI CCATGG 1 cut(s) 675
NdeII GATC 5 cut(s) 22, 96, 207, 396, 442
NlaIII CATG 3 cut(s) 75, 151, 679
NlaIV GGNNCC 3 cut(s) 156, 438, 681
NmeAIII GCCGAG 2 cut(s) 26, 47
NsiI ATGCAT 1 cut(s) 528
PaeR7I CTCGAG 1 cut(s) 18
PfeI GAWTC 3 cut(s) 124, 230, 277
PkrI GCNGC 1 cut(s) 426
Ple19I CGATCG 1 cut(s) 99
PleI GAGTC 2 cut(s) 38, 384
PpsI GAGTC 2 cut(s) 38, 384
PpuMI RGGWCCY 1 cut(s) 154
PsiI TTATAA 1 cut(s) 727
Psp5II RGGWCCY 1 cut(s) 154
Psp6I CCWGG 2 cut(s) 29, 157
PspGI CCWGG 2 cut(s) 29, 157
PspN4I GGNNCC 3 cut(s) 156, 438, 681
PspPI GGNCC 2 cut(s) 154, 531
PspPPI RGGWCCY 1 cut(s) 154
PstNI CAGNNNCTG 1 cut(s) 639
PsuI RGATCY 2 cut(s) 22, 396
PvuI CGATCG 1 cut(s) 99
PvuII CAGCTG 1 cut(s) 589
RsaI GTAC 6 cut(s) 438, 465, 484, 625, 637, 691
RsaNI GTAC 6 cut(s) 437, 464, 483, 624, 636, 690
SaqAI TTAA 2 cut(s) 552, 704
SatI GCNGC 1 cut(s) 425
Sau3AI GATC 5 cut(s) 22, 96, 207, 396, 442
Sau96I GGNCC 2 cut(s) 154, 531
ScaI AGTACT 2 cut(s) 484, 691
SchI GAGTC 2 cut(s) 38, 385
ScrFI CCNGG 2 cut(s) 31, 159
SfaNI GCATC 2 cut(s) 411, 535
SfcI CTRYAG 2 cut(s) 165, 640
Sfr274I CTCGAG 1 cut(s) 18
SgrAI CRCCGGYG 1 cut(s) 337
SinI GGWCC 1 cut(s) 154
SlaI CTCGAG 1 cut(s) 18
SmlI CTYRAG 3 cut(s) 18, 569, 716
SmoI CTYRAG 3 cut(s) 18, 569, 716
Sse9I AATT 2 cut(s) 112, 428
SsiI CCGC 2 cut(s) 216, 304
SspMI CTAG 4 cut(s) 62, 384, 450, 473
StyD4I CCNGG 2 cut(s) 29, 157
StyI CCWWGG 2 cut(s) 449, 675
TaiI ACGT 2 cut(s) 223, 659
TaqI TCGA 1 cut(s) 19
TaqII GACCGA 1 cut(s) 89
TasI AATT 2 cut(s) 112, 428
TatI WGTACW 3 cut(s) 463, 482, 689
TfiI GAWTC 3 cut(s) 124, 230, 277
Tru1I TTAA 2 cut(s) 552, 704
Tru9I TTAA 2 cut(s) 552, 704
TscAI CASTG 2 cut(s) 217, 513
TseI GCWGC 1 cut(s) 424
TspGWI ACGGA 1 cut(s) 404
TspRI CASTG 2 cut(s) 217, 513
VpaK11BI GGWCC 1 cut(s) 154
XhoI CTCGAG 1 cut(s) 18
XmaJI CCTAGG 1 cut(s) 449
XspI CTAG 4 cut(s) 62, 384, 450, 473
ZraI GACGTC 1 cut(s) 221
ZrmI AGTACT 2 cut(s) 484, 691
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.