Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0004750

Physical Location & Seq

Genomic Coordinates Reverse (-)

29777987 .. 29787203

Gene Structure 9217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G023690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGTCCATTCCCAAGGAGCCGGACCAGGTAATGAAGCAGAGGGGAGGCTCTGTTCTCGGAAAGAAGACCATTCTCAAGAGTGACCACTTCCCTGGCTGCCAGAACAAACGCCTCTCCCCCCACATTGACGGCGCTCCCAATTACCGTCAGGCCGACAAGTTACGTGTTCATGGTGTTGCGATTCCCACAATTGATGGAATCCAGAATGTTCTTAAGCATATTGGAGCTCAGCAAATTGATGGCAAGCGAGCCCAAGTTCTTTGGATTAACCTTCGCGAGGAACCGCTTGTTTACATTAATGGGCGCCCTTTTGTGCTGCGTGATGTGGAAAGACCCTTCTCCAACCTTGAATATACGGGGATTAACAGGGCTAGGGTTGAACAAATGGAAGCCCGATTGAAAGAAGATATCTTGGTTGAAGCTGCAAGATATGGAAATAAGATCCTTGTCACGGACGAATTGCCAGATGGCCAGATGGTCGATCAATGGGAACCGGTGTCATTTGATTCTGTGAAGACACCACTAGAGGTTTACGAGGAATTGCAACTCATAGGATACCGGGTTGATTATGAACGTGTTCCTGTAACTGATGAAAAATCACCTAAGGAGCTGGATTTTGATATCCTGGTTCATAAAATTTCTCAAGCTGACATAAATGCAGAAATAATTTTTAATTGTCAAATGGGACGAGGGCGAACTACAACTGGGATGGTCATTGCTACTCTGATATACCTCAACCGTATAGGAGCTTCTGGTATTCCAAGAACGAACTCAATCGGAAAAGTTTCTGACTCCAGTGTGATTGTCGCTGATAATGTTCCAAACTCAGAAGATGCGATCCGAAGAGGAGAATATGCAGTCATAAGAAGCTTGATTCGGGTCCTAGAGGGTGGTGTTGAAGGGAAGAGACAAGTGGACAAAGTCATCGACAAGTGTTCCTCTATGCAGAACTTACGCGAAGCAATTGCCATTTATCGCAATAGTATCCTGCGTCAACCAGATGAGATGAAAAGGGAGGCGTCACTTTCATTTTTTGTGGAGTATTTGGAACGATATTACTTTCTTATATGCTTTGCTGTGTACATTCATTCCCTCCGGTCTAGTTCCTCTGATCATTGCAGCTTTGCTGACTGGATGAAAGCTCGACCAGAACTGTACAGCATTATTCGCAGGTTGCTGAGAAGAGATCCAATGGGTGCACTTGGATATGCAACGTTTAATCCATCACTGAAGAAGATTGATGAATCTGCTGATAACCGCCCTTCTGAGATGGGTGTAGTTGCTGCCTTGAGAAAGGGTGAGGTCCTTGGTAGTCAAACTGTTTTGAAAAGTGACCACTGTCCCGGTTGTCAAAACCCAAATCTACCCGAGCGCGTGGATGGTGCTCCTAATTTCCGAGAGGTCCCTGGATTTCCAGTTTATGGAGTTGCAAACCCAACAATTGATGGTATTCGGTCAGTCATCCAAAGGATTGGTAGTTCCAAAGATGGTTGCCCAATTTTTTGGCACAATATGAGAGAAGAACCTGTTATCTATATCAATGGAAAACCATTTGTACTCCGCGAGGTTGAAAGACCATACAAAAATATGCTTGAGTACACGGGCATTGATCGTGAGAGAGTGGAGAGGATGGAAGCTCGACTAAAAGAAGATATCCTGCGTGAAGCTGAACATTATAGGGGTGCTATAATGGTTATTCATGAAACAGAAGACGGACAAATTTTTGATGCTTGGGAACATGTGGATTCTGGGGCTATTCAGACCCCACTTGAGGTTTTCAAAAGCTTGGAGAGAGATGGTTTTCCCATAAAGTATGCTCGTGTACCCATCACTGATGGTAAAGCGCCGAAAAGTTCCGACTTTGACAAGTTGGCTATGAATATTGCTTCTTCATCAAAGGCCACTGCTTTTGTTTTCAATTGCCAGATGGGTCGAGGAAGGACAACCACAGGTACTGTAATTGCTTGCCTTTTGAAACTTCGAATTGACTATGGGAGACCTATCAAAATCCTTGTTGACAATATCGCCGGTGAAGAGGTAGATGGCGGTAGCTCAAGTGGTGAAGAAACAGCAGGTTCTGGTACTGCATCATCCTCCAGTATTTCAAATGTAAGAACTGACAAGGAGCAAGGCCGTGTGTTTGGCATGAATGACATCCTCCTGTTGTGGAAAATTACAAGATTGTTCGATAATGGGGTTCAATGCCGGGAAGCCTTAGATGCTATTATTGATAGATGTTCTGCTCTACAGAACATACGCCAAGCCGTTTTGCAATATAGAAGGGTATTCAATCAACAACATGTTGAGCAAAGGGTAAGGAGGGTGGCATTAAATCGTGGTGCTGAGTACTTGGAGCGCTACTTCCGTTTAATTGCTTTTGCAGCATACTTAGGAAGTGAAGCATTTGATGGATTTTGCGGGCAAGGAGAATCTAGGATGACATTTAAGAATTGGATGCATCAGAGACCGGAGGTTCAAGCAATGAAATGGAGCATTAAATTAAGACCTGGAAGATTTTTAACTGTCCCTGAGGAATTGAGAGCACCTCAAGAGTCCCAACATGGAGATGCTGTTATGGAGGCTATTATCAAGGCCCGTAGTGGCTCTGTTCTGGGGAAAGGTTCGATACTTAAAATGTATTTCTTTCCCGGTCAGAGGACTTCTAGCCACATACAAATTCATGGTGCACCACATGTTTACAAGGTGGACGGATATCCTGTGTATAGCATGGCTACGCCAACAATTCCTGGTGCCAAAGAGATGTTAGCATATTTAGGTGCCAAGCCCGAAGCAGAAGGATCTGCTACTGCAAAAGTGGTTTTAACTGATCTGAGAGAAGAAGCAGTTGTTTACATTAATGGCACACCATTTGTGTTGCGGGAGCTACATAAACCTGTTGATACACTCAAGCATGTGGGAATAACTGGCCCAGTGGTAGAACACATGGAAGCACGATTAAAAGAGGATATACTCCGAGGTCAGACGGTCTGGTGGCCGTATGCTTTTACATCGCGAGGAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTPlike_phytase

Protein Analysis

1007

Amino Acids

113.29

Weight (kDa)

8.33

Isoelectric Point (pI)

38.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTPlike_phytase	PF14566	89 - 243	3.7e-55	Inositol hexakisphosphate
PTPlike_phytase	PF14566	503 - 659	2.2e-57	Inositol hexakisphosphate
PTPlike_phytase	PF14566	943 - 992	5.2e-13	Inositol hexakisphosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62010 AT3G62010
fragaria_vesca	FvH4_1g26030 FvH4_1g26030 FvH4_1g26030 FvH4_1g26030 FvH4_1g26030 FvH4_1g26030 FvH4_1g26030 FvH4_1g26030
malus_domestica	MD09G1291900.v1.1 MD09G1292000.v1.1 MD17G1285800.v1.1
prunus_persica	Prupe.3G000300_v2.0.a1 Prupe.3G000300_v2.0.a1 Prupe.3G000300_v2.0.a1
pyrus_communis	pycom09g20000 pycom17g28150 pycom17g28160
rosa_chinensis	RchiOBHm_Chr3g0485491
rosa_laevigata	RLG00000023148 RLG00000023149
rosa_multiflora	Rmu_sc0004711.1_g000027
rosa_roxburghii	Rroxscaffold_6G00397000
rosa_rugosa	Rorug03G0218500
rosa_samantha	Rh3AG268000 Rh3BG303500 Rh3CG301600 Rh3DG298400
rosa_wichuraiana	Rw3G023690 Rw3G023900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1161, 2063
AccB1I	GGYRCC	3 cut(s)	303, 2750, 2777
AccB7I	CCANNNNNTGG	1 cut(s)	1421
AccII	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
AciI	CCGC	6 cut(s)	284, 1258, 1561, 2046, 2418, 2878
AclI	AACGTT	1 cut(s)	1214
AclWI	GGATC	4 cut(s)	436, 832, 1181, 2806
AcoI	YGGCCR	2 cut(s)	469, 2993
AcsI	RAATTY	3 cut(s)	636, 1719, 2676
AcuI	CTGAAG	1 cut(s)	1250
AcyI	GRCGYC	2 cut(s)	304, 1019
AfaI	GTAC	8 cut(s)	1082, 1157, 1557, 1598, 1824, 1954, 2083, 2348
AfeI	AGCGCT	1 cut(s)	2357
AfiI	CCNNNNNNNGG	5 cut(s)	277, 451, 1421, 1771, 2655
AflII	CTTAAG	1 cut(s)	212
AflIII	ACRYGT	5 cut(s)	163, 574, 1738, 2299, 2692
AgeI	ACCGGT	1 cut(s)	493
AjnI	CCWGG	6 cut(s)	24, 91, 624, 1405, 2506, 2746
AloI	GAACNNNNNNTCC	4 cut(s)	36, 68, 1462, 1494
Alw21I	GWGCWC	5 cut(s)	229, 1201, 1387, 2545, 2689
Alw26I	GTCTC	3 cut(s)	901, 1990, 2458
Alw44I	GTGCAC	2 cut(s)	1197, 2685
AlwI	GGATC	4 cut(s)	436, 832, 1181, 2806
AlwNI	CAGNNNCTG	2 cut(s)	1955, 2078
Ama87I	CYCGRG	1 cut(s)	1367
Aor51HI	AGCGCT	1 cut(s)	2357
AoxI	GGCC	7 cut(s)	150, 469, 1899, 2131, 2592, 2926, 2993
ApaLI	GTGCAC	2 cut(s)	1197, 2685
ApeKI	GCWGC	6 cut(s)	96, 316, 422, 1119, 1283, 2381
ApoI	RAATTY	3 cut(s)	636, 1719, 2676
AseI	ATTAAT	2 cut(s)	297, 2856
AsiGI	ACCGGT	1 cut(s)	493
Asp700I	GAANNNNTTC	2 cut(s)	576, 784
AspLEI	GCGC	5 cut(s)	134, 306, 1374, 1846, 2358
AspS9I	GGNCC	6 cut(s)	22, 880, 1303, 1402, 2593, 2927
AsuC2I	CCSGG	4 cut(s)	560, 1344, 2207, 2649
AsuHPI	GGTGA	4 cut(s)	591, 1310, 2042, 2072
AsuII	TTCGAA	1 cut(s)	1981
AvaI	CYCGRG	1 cut(s)	1367
AvaII	GGWCC	4 cut(s)	22, 880, 1303, 1402
AxyI	CCTNAGG	2 cut(s)	603, 2529
BaeGI	GKGCMC	2 cut(s)	1201, 2689
BalI	TGGCCA	1 cut(s)	471
BanI	GGYRCC	3 cut(s)	303, 2750, 2777
BanII	GRGCYC	2 cut(s)	229, 253
BarI	GAAGNNNNNNTAC	2 cut(s)	733, 765
BauI	CACGAG	1 cut(s)	1818
BbsI	GAAGAC	3 cut(s)	71, 521, 1716
Bbv12I	GWGCWC	5 cut(s)	229, 1201, 1387, 2545, 2689
BbvI	GCAGC	6 cut(s)	83, 303, 409, 1131, 1270, 2393
BceAI	ACGGC	4 cut(s)	145, 2118, 2249, 2980
BcgI	CGANNNNNNTGC	2 cut(s)	947, 981
BciT130I	CCWGG	6 cut(s)	26, 93, 626, 1407, 2508, 2748
BciVI	GTATCC	2 cut(s)	548, 995
BclI	TGATCA	1 cut(s)	1111
BcnI	CCSGG	4 cut(s)	560, 1344, 2207, 2649
BcoDI	GTCTC	3 cut(s)	901, 1990, 2458
BfaI	CTAG	6 cut(s)	372, 524, 884, 1101, 2433, 2664
BfmI	CTRYAG	1 cut(s)	2246
BfoI	RGCGCY	4 cut(s)	135, 307, 1847, 2359
BfrI	CTTAAG	1 cut(s)	212
BfuAI	ACCTGC	2 cut(s)	1161, 2063
BfuI	GTATCC	2 cut(s)	548, 995
BisI	GCNGC	6 cut(s)	97, 317, 423, 1120, 1284, 2382
BlpI	GCTNAGC	1 cut(s)	228
BlsI	GCNGC	6 cut(s)	98, 318, 424, 1121, 1285, 2383
BmcAI	AGTACT	1 cut(s)	2348
Bme18I	GGWCC	4 cut(s)	22, 880, 1303, 1402
BmeT110I	CYCGRG	1 cut(s)	1367
BmgT120I	GGNCC	6 cut(s)	22, 880, 1303, 1402, 2593, 2927
BmiI	GGNNCC	8 cut(s)	18, 282, 305, 492, 881, 1404, 2752, 2779
BmrI	ACTGGG	2 cut(s)	714, 2924
BmsI	GCATC	7 cut(s)	823, 1717, 2096, 2209, 2445, 2467, 2557
BmuI	ACTGGG	2 cut(s)	714, 2924
BoxI	GACNNNNGTC	1 cut(s)	1338
BpiI	GAAGAC	3 cut(s)	71, 521, 1716
BplI	GAGNNNNNCTC	2 cut(s)	2530, 2562
BpmI	CTGGAG	2 cut(s)	778, 2080
Bpu1102I	GCTNAGC	1 cut(s)	228
Bpu14I	TTCGAA	1 cut(s)	1981
BpuEI	CTTGAG	8 cut(s)	59, 627, 1309, 1613, 1790, 2038, 2532, 2891
BpuMI	CCSGG	4 cut(s)	560, 1344, 2207, 2649
BsaAI	YACGTR	1 cut(s)	164
BsaHI	GRCGYC	2 cut(s)	304, 1019
BsaI	GGTCTC	2 cut(s)	1990, 2458
BsaJI	CCNNGG	5 cut(s)	12, 91, 1306, 1405, 2974
BsaWI	WCCGGW	3 cut(s)	493, 1095, 2467
BsaXI	ACNNNNNCTCC	4 cut(s)	36, 66, 2556, 2586
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 451, 1421, 1771, 2655
Bse118I	RCCGGY	2 cut(s)	493, 2027
Bse1I	ACTGG	7 cut(s)	709, 795, 1136, 1415, 2097, 2929, 2930
Bse21I	CCTNAGG	2 cut(s)	603, 2529
Bse3DI	GCAATG	3 cut(s)	714, 1114, 2487
BseBI	CCWGG	6 cut(s)	26, 93, 626, 1407, 2508, 2748
BseDI	CCNNGG	5 cut(s)	12, 91, 1306, 1405, 2974
BseGI	GGATG	9 cut(s)	714, 1140, 1384, 1461, 1635, 2090, 2154, 2442, 2460
BseLI	CCNNNNNNNGG	5 cut(s)	277, 451, 1421, 1771, 2655
BseMI	GCAATG	3 cut(s)	714, 1114, 2487
BseMII	CTCAG	7 cut(s)	242, 840, 1169, 1257, 2334, 2520, 2822
BseNI	ACTGG	7 cut(s)	709, 795, 1136, 1415, 2097, 2929, 2930
BseRI	GAGGAG	1 cut(s)	861
BseSI	GKGCMC	2 cut(s)	1201, 2689
BseXI	GCAGC	6 cut(s)	83, 303, 409, 1131, 1270, 2393
Bsh1236I	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
BshFI	GGCC	7 cut(s)	152, 471, 1901, 2133, 2594, 2928, 2995
BshNI	GGYRCC	3 cut(s)	303, 2750, 2777
BshTI	ACCGGT	1 cut(s)	493
BsiHKAI	GWGCWC	5 cut(s)	229, 1201, 1387, 2545, 2689
BsiHKCI	CYCGRG	1 cut(s)	1367
BsiSI	CCGG	9 cut(s)	20, 494, 559, 1096, 1344, 2028, 2206, 2468, 2649
BslFI	GGGAC	5 cut(s)	699, 1326, 1388, 2510, 2539
BslI	CCNNNNNNNGG	5 cut(s)	277, 451, 1421, 1771, 2655
BsmAI	GTCTC	3 cut(s)	901, 1990, 2458
BsmFI	GGGAC	5 cut(s)	699, 1326, 1388, 2510, 2539
BsnI	GGCC	7 cut(s)	152, 471, 1901, 2133, 2594, 2928, 2995
Bso31I	GGTCTC	2 cut(s)	1990, 2458
BsoBI	CYCGRG	1 cut(s)	1367
Bsp119I	TTCGAA	1 cut(s)	1981
Bsp1286I	GDGCHC	6 cut(s)	229, 253, 1201, 1387, 2545, 2689
Bsp1407I	TGTACA	2 cut(s)	1080, 1155
Bsp143I	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
Bsp1720I	GCTNAGC	1 cut(s)	228
Bsp68I	TCGCGA	2 cut(s)	276, 3013
BspACI	CCGC	6 cut(s)	284, 1258, 1561, 2046, 2418, 2878
BspANI	GGCC	7 cut(s)	152, 471, 1901, 2133, 2594, 2928, 2995
BspCNI	CTCAG	7 cut(s)	241, 839, 1170, 1258, 2335, 2521, 2823
BspFNI	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
BspHI	TCATGA	1 cut(s)	1699
BspLI	GGNNCC	8 cut(s)	18, 282, 305, 492, 881, 1404, 2752, 2779
BspMI	ACCTGC	2 cut(s)	1161, 2063
BspPI	GGATC	4 cut(s)	436, 832, 1181, 2806
BspT104I	TTCGAA	1 cut(s)	1981
BspT107I	GGYRCC	3 cut(s)	303, 2750, 2777
BspTI	CTTAAG	1 cut(s)	212
BspTNI	GGTCTC	2 cut(s)	1990, 2458
BsrDI	GCAATG	3 cut(s)	714, 1114, 2487
BsrFI	RCCGGY	2 cut(s)	493, 2027
BsrGI	TGTACA	2 cut(s)	1080, 1155
BsrI	ACTGG	7 cut(s)	709, 795, 1136, 1415, 2097, 2929, 2930
BssAI	RCCGGY	2 cut(s)	493, 2027
BssECI	CCNNGG	5 cut(s)	12, 91, 1306, 1405, 2974
BssMI	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
BssNI	GRCGYC	2 cut(s)	304, 1019
BssSI	CACGAG	1 cut(s)	1818
BssT1I	CCWWGG	2 cut(s)	12, 1306
Bst2BI	CACGAG	1 cut(s)	1818
Bst2UI	CCWGG	6 cut(s)	26, 93, 626, 1407, 2508, 2748
Bst4CI	ACNGT	8 cut(s)	146, 740, 1155, 1321, 1340, 1957, 2524, 2986
Bst6I	CTCTTC	4 cut(s)	838, 899, 1177, 2028
BstACI	GRCGYC	2 cut(s)	304, 1019
BstAFI	CTTAAG	1 cut(s)	212
BstAUI	TGTACA	2 cut(s)	1080, 1155
BstBAI	YACGTR	1 cut(s)	164
BstBI	TTCGAA	1 cut(s)	1981
BstC8I	GCNNGC	4 cut(s)	245, 249, 1966, 2420
BstENI	CCTNNNNNAGG	1 cut(s)	275
BstF5I	GGATG	9 cut(s)	714, 1140, 1384, 1461, 1635, 2090, 2154, 2442, 2460
BstFNI	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
BstH2I	RGCGCY	4 cut(s)	135, 307, 1847, 2359
BstHHI	GCGC	5 cut(s)	134, 306, 1374, 1846, 2358
BstKTI	GATC	8 cut(s)	444, 484, 840, 1114, 1189, 1612, 2801, 2830
BstMAI	GTCTC	3 cut(s)	901, 1990, 2458
BstMBI	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
BstMWI	GCNNNNNNNGC	3 cut(s)	1167, 2219, 2381
BstNI	CCWGG	6 cut(s)	26, 93, 626, 1407, 2508, 2748
BstNSI	RCATGY	4 cut(s)	1742, 2303, 2696, 2915
BstPAI	GACNNNNGTC	1 cut(s)	1338
BstSFI	CTRYAG	1 cut(s)	2246
BstSLI	GKGCMC	2 cut(s)	1201, 2689
BstUI	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
BstV1I	GCAGC	6 cut(s)	83, 303, 409, 1131, 1270, 2393
BstV2I	GAAGAC	3 cut(s)	71, 521, 1716
BstX2I	RGATCY	3 cut(s)	441, 1186, 2798
BstXI	CCANNNNNNTGG	3 cut(s)	92, 1472, 1503
BstYI	RGATCY	3 cut(s)	441, 1186, 2798
Bsu36I	CCTNAGG	2 cut(s)	603, 2529
BsuI	GTATCC	2 cut(s)	548, 995
BsuRI	GGCC	7 cut(s)	152, 471, 1901, 2133, 2594, 2928, 2995
BtgZI	GCGATG	1 cut(s)	2994
BtsCI	GGATG	9 cut(s)	714, 1140, 1384, 1461, 1635, 2090, 2154, 2442, 2460
BtsI	GCAGTG	1 cut(s)	1902
BtsIMutI	CAGTG	6 cut(s)	802, 1226, 1336, 1830, 1902, 2937
BtuMI	TCGCGA	2 cut(s)	276, 3013
BveI	ACCTGC	2 cut(s)	1161, 2063
Cac8I	GCNNGC	4 cut(s)	245, 249, 1966, 2420
CaiI	CAGNNNCTG	2 cut(s)	1955, 2078
CciI	TCATGA	1 cut(s)	1699
CfoI	GCGC	5 cut(s)	134, 306, 1374, 1846, 2358
Cfr10I	RCCGGY	2 cut(s)	493, 2027
Cfr13I	GGNCC	6 cut(s)	22, 880, 1303, 1402, 2593, 2927
CseI	GACGC	2 cut(s)	980, 1008
CsiI	ACCWGGT	1 cut(s)	24
Csp6I	GTAC	8 cut(s)	1081, 1156, 1556, 1597, 1823, 1953, 2082, 2347
CspAI	ACCGGT	1 cut(s)	493
CspCI	CAANNNNNGTGG	2 cut(s)	1891, 1926
CviQI	GTAC	8 cut(s)	1081, 1156, 1556, 1597, 1823, 1953, 2082, 2347
DinI	GGCGCC	1 cut(s)	305
DpnI	GATC	8 cut(s)	443, 483, 839, 1113, 1188, 1611, 2800, 2829
DpnII	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
EaeI	YGGCCR	2 cut(s)	469, 2993
Eam1104I	CTCTTC	4 cut(s)	838, 899, 1177, 2028
EarI	CTCTTC	4 cut(s)	838, 899, 1177, 2028
Ecl136II	GAGCTC	1 cut(s)	227
Eco130I	CCWWGG	2 cut(s)	12, 1306
Eco24I	GRGCYC	2 cut(s)	229, 253
Eco31I	GGTCTC	2 cut(s)	1990, 2458
Eco32I	GATATC	4 cut(s)	409, 622, 1654, 2714
Eco47I	GGWCC	4 cut(s)	22, 880, 1303, 1402
Eco47III	AGCGCT	1 cut(s)	2357
Eco53kI	GAGCTC	1 cut(s)	227
Eco57I	CTGAAG	1 cut(s)	1250
Eco81I	CCTNAGG	2 cut(s)	603, 2529
Eco88I	CYCGRG	1 cut(s)	1367
EcoICRI	GAGCTC	1 cut(s)	227
EcoNI	CCTNNNNNAGG	1 cut(s)	275
EcoO109I	RGGNCCY	3 cut(s)	880, 1303, 1402
EcoRII	CCWGG	6 cut(s)	24, 91, 624, 1405, 2506, 2746
EcoRV	GATATC	4 cut(s)	409, 622, 1654, 2714
EcoT14I	CCWWGG	2 cut(s)	12, 1306
EcoT22I	ATGCAT	1 cut(s)	2460
EcoT38I	GRGCYC	2 cut(s)	229, 253
EgeI	GGCGCC	1 cut(s)	305
EheI	GGCGCC	1 cut(s)	305
ErhI	CCWWGG	2 cut(s)	12, 1306
FaqI	GGGAC	5 cut(s)	699, 1326, 1388, 2510, 2539
FauI	CCCGC	2 cut(s)	2411, 2871
FbaI	TGATCA	1 cut(s)	1111
Fnu4HI	GCNGC	6 cut(s)	97, 317, 423, 1120, 1284, 2382
FokI	GGATG	9 cut(s)	721, 1147, 1391, 1448, 1642, 2077, 2141, 2449, 2467
FriOI	GRGCYC	2 cut(s)	229, 253
Fsp4HI	GCNGC	6 cut(s)	97, 317, 423, 1120, 1284, 2382
FspBI	CTAG	6 cut(s)	372, 524, 884, 1101, 2433, 2664
GlaI	GCGC	5 cut(s)	133, 305, 1373, 1845, 2357
GluI	GCNGC	6 cut(s)	97, 317, 423, 1120, 1284, 2382
GsuI	CTGGAG	2 cut(s)	778, 2080
HaeII	RGCGCY	4 cut(s)	135, 307, 1847, 2359
HaeIII	GGCC	7 cut(s)	152, 471, 1901, 2133, 2594, 2928, 2995
HapII	CCGG	9 cut(s)	20, 494, 559, 1096, 1344, 2028, 2206, 2468, 2649
HgaI	GACGC	2 cut(s)	980, 1008
HhaI	GCGC	5 cut(s)	134, 306, 1374, 1846, 2358
Hin1I	GRCGYC	2 cut(s)	304, 1019
Hin6I	GCGC	5 cut(s)	132, 304, 1372, 1844, 2356
HinP1I	GCGC	5 cut(s)	132, 304, 1372, 1844, 2356
HincII	GTYRAC	2 cut(s)	995, 2017
HindII	GTYRAC	2 cut(s)	995, 2017
HindIII	AAGCTT	2 cut(s)	868, 1783
HinfI	GANTC	9 cut(s)	181, 198, 506, 791, 874, 1244, 1745, 2429, 2552
HpaII	CCGG	9 cut(s)	20, 494, 559, 1096, 1344, 2028, 2206, 2468, 2649
HphI	GGTGA	4 cut(s)	591, 1310, 2042, 2072
Hpy188III	TCNNGA	7 cut(s)	76, 202, 275, 1613, 1700, 2549, 3012
HpyAV	CCTTC	7 cut(s)	281, 346, 893, 1272, 1932, 2274, 2789
HpyCH4III	ACNGT	8 cut(s)	146, 740, 1155, 1321, 1340, 1957, 2524, 2986
HpyCH4IV	ACGT	3 cut(s)	163, 574, 1214
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1167, 2219, 2381
HpySE526I	ACGT	3 cut(s)	163, 574, 1214
Hsp92I	GRCGYC	2 cut(s)	304, 1019
HspAI	GCGC	5 cut(s)	132, 304, 1372, 1844, 2356
KasI	GGCGCC	1 cut(s)	303
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
Lsp1109I	GCAGC	6 cut(s)	83, 303, 409, 1131, 1270, 2393
LweI	GCATC	7 cut(s)	823, 1717, 2096, 2209, 2445, 2467, 2557
MabI	ACCWGGT	1 cut(s)	24
MaeI	CTAG	6 cut(s)	372, 524, 884, 1101, 2433, 2664
MaeII	ACGT	3 cut(s)	163, 574, 1214
MaeIII	GTNAC	6 cut(s)	80, 159, 448, 583, 1020, 1331
MalI	GATC	8 cut(s)	443, 483, 839, 1113, 1188, 1611, 2800, 2829
MboI	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
MfeI	CAATTG	4 cut(s)	189, 963, 1440, 1918
MflI	RGATCY	3 cut(s)	441, 1186, 2798
MhlI	GDGCHC	6 cut(s)	229, 253, 1201, 1387, 2545, 2689
MlsI	TGGCCA	1 cut(s)	471
MluNI	TGGCCA	1 cut(s)	471
Mly113I	GGCGCC	1 cut(s)	304
MlyI	GAGTC	2 cut(s)	785, 2561
MmeI	TCCRAC	2 cut(s)	366, 1881
Mox20I	TGGCCA	1 cut(s)	471
Mph1103I	ATGCAT	1 cut(s)	2460
MroXI	GAANNNNTTC	2 cut(s)	576, 784
MscI	TGGCCA	1 cut(s)	471
MslI	CAYNNNNRTG	1 cut(s)	2565
Msp20I	TGGCCA	1 cut(s)	471
MspCI	CTTAAG	1 cut(s)	212
MspI	CCGG	9 cut(s)	20, 494, 559, 1096, 1344, 2028, 2206, 2468, 2649
MunI	CAATTG	4 cut(s)	189, 963, 1440, 1918
MvaI	CCWGG	6 cut(s)	26, 93, 626, 1407, 2508, 2748
MvnI	CGCG	5 cut(s)	276, 957, 1374, 1563, 3013
MwoI	GCNNNNNNNGC	3 cut(s)	1167, 2219, 2381
NarI	GGCGCC	1 cut(s)	304
NciI	CCSGG	4 cut(s)	560, 1344, 2207, 2649
NdeII	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
NlaIV	GGNNCC	8 cut(s)	18, 282, 305, 492, 881, 1404, 2752, 2779
NmuCI	GTSAC	4 cut(s)	80, 448, 1020, 1331
NruI	TCGCGA	2 cut(s)	276, 3013
NsiI	ATGCAT	1 cut(s)	2460
NspI	RCATGY	4 cut(s)	1742, 2303, 2696, 2915
NspV	TTCGAA	1 cut(s)	1981
PagI	TCATGA	1 cut(s)	1699
PciI	ACATGT	3 cut(s)	1738, 2299, 2692
PdmI	GAANNNNTTC	2 cut(s)	576, 784
PfeI	GAWTC	7 cut(s)	181, 198, 506, 874, 1244, 1745, 2429
PflFI	GACNNNGTC	1 cut(s)	920
PflMI	CCANNNNNTGG	1 cut(s)	1421
PinAI	ACCGGT	1 cut(s)	493
PkrI	GCNGC	6 cut(s)	98, 318, 424, 1121, 1285, 2383
PleI	GAGTC	2 cut(s)	785, 2560
PluTI	GGCGCC	1 cut(s)	307
PpsI	GAGTC	2 cut(s)	785, 2560
Ppu21I	YACGTR	1 cut(s)	164
PpuMI	RGGWCCY	3 cut(s)	880, 1303, 1402
PscI	ACATGT	3 cut(s)	1738, 2299, 2692
PshAI	GACNNNNGTC	1 cut(s)	1338
PshBI	ATTAAT	2 cut(s)	297, 2856
Psp124BI	GAGCTC	1 cut(s)	229
Psp1406I	AACGTT	1 cut(s)	1214
Psp5II	RGGWCCY	3 cut(s)	880, 1303, 1402
Psp6I	CCWGG	6 cut(s)	24, 91, 624, 1405, 2506, 2746
PspGI	CCWGG	6 cut(s)	24, 91, 624, 1405, 2506, 2746
PspN4I	GGNNCC	8 cut(s)	18, 282, 305, 492, 881, 1404, 2752, 2779
PspPI	GGNCC	6 cut(s)	22, 880, 1303, 1402, 2593, 2927
PspPPI	RGGWCCY	3 cut(s)	880, 1303, 1402
PstNI	CAGNNNCTG	2 cut(s)	1955, 2078
PsuI	RGATCY	3 cut(s)	441, 1186, 2798
PsyI	GACNNNGTC	1 cut(s)	920
RruI	TCGCGA	2 cut(s)	276, 3013
RsaI	GTAC	8 cut(s)	1082, 1157, 1557, 1598, 1824, 1954, 2083, 2348
RsaNI	GTAC	8 cut(s)	1081, 1156, 1556, 1597, 1823, 1953, 2082, 2347
RseI	CAYNNNNRTG	1 cut(s)	2565
SacI	GAGCTC	1 cut(s)	229
SatI	GCNGC	6 cut(s)	97, 317, 423, 1120, 1284, 2382
Sau3AI	GATC	8 cut(s)	441, 481, 837, 1111, 1186, 1609, 2798, 2827
Sau96I	GGNCC	6 cut(s)	22, 880, 1303, 1402, 2593, 2927
ScaI	AGTACT	1 cut(s)	2348
SchI	GAGTC	2 cut(s)	785, 2561
SduI	GDGCHC	6 cut(s)	229, 253, 1201, 1387, 2545, 2689
SexAI	ACCWGGT	1 cut(s)	24
SfaNI	GCATC	7 cut(s)	823, 1717, 2096, 2209, 2445, 2467, 2557
SfcI	CTRYAG	1 cut(s)	2246
SfoI	GGCGCC	1 cut(s)	305
SfuI	TTCGAA	1 cut(s)	1981
SgrAI	CRCCGGYG	1 cut(s)	2027
SinI	GGWCC	4 cut(s)	22, 880, 1303, 1402
SmiMI	CAYNNNNRTG	1 cut(s)	2565
SmlI	CTYRAG	9 cut(s)	74, 212, 642, 1288, 1592, 1769, 2053, 2547, 2906
SmoI	CTYRAG	9 cut(s)	74, 212, 642, 1288, 1592, 1769, 2053, 2547, 2906
SsiI	CCGC	6 cut(s)	284, 1258, 1561, 2046, 2418, 2878
SspDI	GGCGCC	1 cut(s)	303
SspI	AATATT	1 cut(s)	1882
SspMI	CTAG	6 cut(s)	372, 524, 884, 1101, 2433, 2664
SstI	GAGCTC	1 cut(s)	229
StyI	CCWWGG	2 cut(s)	12, 1306
TaaI	ACNGT	8 cut(s)	146, 740, 1155, 1321, 1340, 1957, 2524, 2986
TaiI	ACGT	3 cut(s)	166, 577, 1217
TaqI	TCGA	8 cut(s)	480, 927, 1144, 1639, 1933, 1981, 2187, 2624
TaqII	GACCGA	1 cut(s)	1443
TatI	WGTACW	5 cut(s)	1080, 1155, 1555, 1596, 2346
TfiI	GAWTC	7 cut(s)	181, 198, 506, 874, 1244, 1745, 2429
TscAI	CASTG	6 cut(s)	802, 1233, 1343, 1837, 1909, 2937
TseFI	GTSAC	4 cut(s)	80, 448, 1020, 1331
TseI	GCWGC	6 cut(s)	96, 316, 422, 1119, 1283, 2381
Tsp45I	GTSAC	4 cut(s)	80, 448, 1020, 1331
TspGWI	ACGGA	4 cut(s)	467, 1728, 2354, 2724
TspRI	CASTG	6 cut(s)	802, 1233, 1343, 1837, 1909, 2937
Tth111I	GACNNNGTC	1 cut(s)	920
Van91I	CCANNNNNTGG	1 cut(s)	1421
Vha464I	CTTAAG	1 cut(s)	212
VneI	GTGCAC	2 cut(s)	1197, 2685
VpaK11BI	GGWCC	4 cut(s)	22, 880, 1303, 1402
VspI	ATTAAT	2 cut(s)	297, 2856
XagI	CCTNNNNNAGG	1 cut(s)	275
XapI	RAATTY	3 cut(s)	636, 1719, 2676
XceI	RCATGY	4 cut(s)	1742, 2303, 2696, 2915
XmnI	GAANNNNTTC	2 cut(s)	576, 784
XspI	CTAG	6 cut(s)	372, 524, 884, 1101, 2433, 2664
ZrmI	AGTACT	1 cut(s)	2348
Zsp2I	ATGCAT	1 cut(s)	2460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.