MD10G1089100.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
13174757 .. 13179001
4245 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1089100.v1.1.491

Sequence Viewer

Length: 1125 bp
ATGAATCGGTCTGTGCTCACAGTTGGGCCAGCCATGGACATGCCGATCATGCACGACAGCGATCGGTACGAGCTGGTTCGGGATATTGGGTCGGGAAATTTCGGGGTTGCACGGCTTATGAGGGACAAGCAGACTGGTGAGCTTGTTGCTGTGAAATACATAGAGAGAGGTGAGAAGGATTATGGAGTTTATGTGTATTTCGAATGGGAGTTTATAGATGAAAATGTACAAAGAGAAATTATAAACCACAGGTCATTGAGGCATCCGAACATTGTCCGGTTCAAAGAGGTAATATTAACACCCACTCATCTGGCTATTGTGATGGAATATGCATCTGGGGGAGAGCTCTTTGAGCGTATATGCAACGCTGGGCGTTTCAGTGAGGATGAGGCGCGTTTCTTCTTCCAGCAACTTATATCAGGAGTCAGTTACTGTCATGCAATGCAAGTGTGCCACCGGGACTTGAAGTTGGAGAACACATTGTTAGATGGAAGTCCAGCTCCTCGTTTAAAAATATGTGACTTTGGCTACTCTAAGTCCTCAGTGCTGCATTCACAACCAAAATCGACCGTGGGCACCCCTGCATATATTGCACCTGAGGTGTTACTCAAGAAAGAATATGATGGAAAGATTGCAGATGTATGGTCTTGTGGGGTGACCTTATACGTCATGTTGGTGGGTGCATATCCATTTGAAGATCCTGGGGAGCCTAAAAACTTCCGCAAGACAATACACCGGATAACGAATGTCCAGTACTCTATTCCTGACTATGTTCATATATCTCCGGAGTGCCGCCATCTAATATCAAGGATTTTCGTAGCTGAGCCCGAGAAGAGGATAACCATCCCTGAGATCAGGAACCACGAATGGTTTCTAAAGAACCTTCCAGCAGATCTCATGGTTGAAAACACCATGAACAACCAGTTTGAAGAGCCGGATCAACCCATGCAAAGCCTTGATGAGATTATGCAGATAATTGCCGAGGCTACAATACCTGCGGCCGGGGCCAACAGTCTCAACCAGTATCTTGCTGGCAGCCTGGACATAGATAACATGGAGGAGGACCTCGAGTCTGATCCCGACATTGACATTGACAGCAGCGGAGAGATAGTCTATGCAATTTAA

Protein Analysis

375

Amino Acids

42.62

Weight (kDa)

4.9

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 23 - 291 2.1e-71 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 287 5.3e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014892)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 1003
AccB1I GGYRCC 1 cut(s) 575
AccII CGCG 1 cut(s) 394
AccIII TCCGGA 1 cut(s) 784
AciI CCGC 4 cut(s) 721, 793, 998, 1101
AclWI GGATC 3 cut(s) 692, 945, 1070
AcoI YGGCCR 1 cut(s) 999
AcsI RAATTY 1 cut(s) 97
AfaI GTAC 3 cut(s) 68, 228, 755
AfiI CCNNNNNNNGG 2 cut(s) 834, 1001
AgsI TTSAA 5 cut(s) 283, 466, 695, 905, 929
AhdI GACNNNNNGTC 1 cut(s) 1069
AjnI CCWGG 2 cut(s) 700, 1038
AluBI AGCT 5 cut(s) 73, 142, 346, 500, 821
AluI AGCT 5 cut(s) 73, 142, 346, 500, 821
Alw21I GWGCWC 2 cut(s) 18, 348
Alw26I GTCTC 1 cut(s) 1019
AlwI GGATC 3 cut(s) 692, 945, 1070
AlwNI CAGNNNCTG 1 cut(s) 432
Ama87I CYCGRG 2 cut(s) 827, 1067
Aor13HI TCCGGA 1 cut(s) 784
AoxI GGCC 3 cut(s) 26, 999, 1005
ApeKI GCWGC 3 cut(s) 547, 1035, 1098
ApoI RAATTY 1 cut(s) 97
Asp700I GAANNNNTTC 1 cut(s) 870
AspLEI GCGC 1 cut(s) 394
AspS9I GGNCC 3 cut(s) 26, 1005, 1063
AsuC2I CCSGG 2 cut(s) 458, 1003
AsuHPI GGTGA 3 cut(s) 149, 182, 667
AsuII TTCGAA 1 cut(s) 201
AvaI CYCGRG 2 cut(s) 827, 1067
AvaII GGWCC 1 cut(s) 1063
AxyI CCTNAGG 1 cut(s) 597
BaeGI GKGCMC 1 cut(s) 578
BanI GGYRCC 1 cut(s) 575
BanII GRGCYC 2 cut(s) 348, 828
Bbv12I GWGCWC 2 cut(s) 18, 348
BbvI GCAGC 3 cut(s) 534, 1047, 1110
BccI CCATC 5 cut(s) 316, 482, 617, 804, 851
BceAI ACGGC 1 cut(s) 128
BciT130I CCWGG 2 cut(s) 702, 1040
BcnI CCSGG 2 cut(s) 458, 1003
BcoDI GTCTC 1 cut(s) 1019
BfuAI ACCTGC 1 cut(s) 1003
BglII AGATCT 1 cut(s) 892
BisI GCNGC 5 cut(s) 548, 793, 999, 1036, 1099
BlpI GCTNAGC 1 cut(s) 822
BlsI GCNGC 5 cut(s) 549, 794, 1000, 1037, 1100
BmcAI AGTACT 1 cut(s) 755
Bme1390I CCNGG 4 cut(s) 458, 702, 1003, 1040
Bme18I GGWCC 1 cut(s) 1063
BmeRI GACNNNNNGTC 1 cut(s) 1069
BmeT110I CYCGRG 2 cut(s) 827, 1067
BmgT120I GGNCC 3 cut(s) 26, 1005, 1063
BmiI GGNNCC 4 cut(s) 577, 708, 860, 1006
BmrFI CCNGG 4 cut(s) 458, 702, 1003, 1040
BmsI GCATC 2 cut(s) 271, 341
Bpu1102I GCTNAGC 1 cut(s) 822
Bpu14I TTCGAA 1 cut(s) 201
BpuEI CTTGAG 1 cut(s) 593
BpuMI CCSGG 2 cut(s) 458, 1003
BsaBI GATNNNNATC 1 cut(s) 842
BsaJI CCNNGG 5 cut(s) 33, 570, 701, 981, 1002
BsaWI WCCGGW 3 cut(s) 276, 735, 784
BsaXI ACNNNNNCTCC 4 cut(s) 177, 207, 1095, 1125
Bsc4I CCNNNNNNNGG 2 cut(s) 834, 1001
Bse1I ACTGG 4 cut(s) 139, 751, 922, 1021
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 1 cut(s) 447
Bse8I GATNNNNATC 1 cut(s) 842
BseAI TCCGGA 1 cut(s) 784
BseBI CCWGG 2 cut(s) 702, 1040
BseDI CCNNGG 5 cut(s) 33, 570, 701, 981, 1002
BseGI GGATG 3 cut(s) 262, 391, 843
BseJI GATNNNNATC 1 cut(s) 842
BseLI CCNNNNNNNGG 2 cut(s) 834, 1001
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 4 cut(s) 555, 588, 813, 840
BseNI ACTGG 4 cut(s) 139, 751, 922, 1021
BseRI GAGGAG 2 cut(s) 492, 1073
BseSI GKGCMC 1 cut(s) 578
BseX3I CGGCCG 1 cut(s) 999
BseXI GCAGC 3 cut(s) 534, 1047, 1110
BseYI CCCAGC 1 cut(s) 368
Bsh1236I CGCG 1 cut(s) 394
Bsh1285I CGRYCG 3 cut(s) 64, 570, 1002
BshFI GGCC 3 cut(s) 28, 1001, 1007
BshNI GGYRCC 1 cut(s) 575
BsiEI CGRYCG 3 cut(s) 64, 570, 1002
BsiHKAI GWGCWC 2 cut(s) 18, 348
BsiHKCI CYCGRG 2 cut(s) 827, 1067
BsiSI CCGG 6 cut(s) 277, 457, 736, 785, 935, 1002
BslFI GGGAC 2 cut(s) 137, 473
BslI CCNNNNNNNGG 2 cut(s) 834, 1001
BsmAI GTCTC 1 cut(s) 1019
BsmFI GGGAC 2 cut(s) 137, 473
BsmI GAATGC 1 cut(s) 550
BsnI GGCC 3 cut(s) 28, 1001, 1007
BsoBI CYCGRG 2 cut(s) 827, 1067
Bsp119I TTCGAA 1 cut(s) 201
Bsp1286I GDGCHC 4 cut(s) 18, 348, 578, 828
Bsp13I TCCGGA 1 cut(s) 784
Bsp1407I TGTACA 1 cut(s) 226
Bsp143I GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
Bsp1720I GCTNAGC 1 cut(s) 822
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 4 cut(s) 721, 793, 998, 1101
BspANI GGCC 3 cut(s) 28, 1001, 1007
BspCNI CTCAG 4 cut(s) 554, 589, 814, 841
BspEI TCCGGA 1 cut(s) 784
BspFNI CGCG 1 cut(s) 394
BspLI GGNNCC 4 cut(s) 577, 708, 860, 1006
BspMI ACCTGC 1 cut(s) 1003
BspPI GGATC 3 cut(s) 692, 945, 1070
BspQI GCTCTTC 1 cut(s) 924
BspT104I TTCGAA 1 cut(s) 201
BspT107I GGYRCC 1 cut(s) 575
BsrDI GCAATG 1 cut(s) 447
BsrGI TGTACA 1 cut(s) 226
BsrI ACTGG 4 cut(s) 139, 751, 922, 1021
BssECI CCNNGG 5 cut(s) 33, 570, 701, 981, 1002
BssMI GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
BssT1I CCWWGG 1 cut(s) 33
Bst2UI CCWGG 2 cut(s) 702, 1040
Bst4CI ACNGT 4 cut(s) 22, 434, 571, 1013
Bst6I CTCTTC 2 cut(s) 827, 924
BstAPI GCANNNNNTGC 1 cut(s) 590
BstAUI TGTACA 1 cut(s) 226
BstBI TTCGAA 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 30, 1033
BstDEI CTNAG 5 cut(s) 534, 541, 597, 822, 849
BstDSI CCRYGG 2 cut(s) 33, 570
BstEII GGTNACC 1 cut(s) 655
BstF5I GGATG 3 cut(s) 262, 391, 843
BstFNI CGCG 1 cut(s) 394
BstHHI GCGC 1 cut(s) 394
BstKTI GATC 7 cut(s) 48, 64, 700, 855, 895, 940, 1078
BstMAI GTCTC 1 cut(s) 1019
BstMBI GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
BstMCI CGRYCG 3 cut(s) 64, 570, 1002
BstMWI GCNNNNNNNGC 4 cut(s) 49, 352, 590, 1004
BstNI CCWGG 2 cut(s) 702, 1040
BstNSI RCATGY 1 cut(s) 43
BstPI GGTNACC 1 cut(s) 655
BstSCI CCNGG 4 cut(s) 456, 700, 1001, 1038
BstSLI GKGCMC 1 cut(s) 578
BstUI CGCG 1 cut(s) 394
BstV1I GCAGC 3 cut(s) 534, 1047, 1110
BstX2I RGATCY 2 cut(s) 697, 892
BstXI CCANNNNNNTGG 1 cut(s) 310
BstYI RGATCY 2 cut(s) 697, 892
BstZI CGGCCG 1 cut(s) 999
Bsu36I CCTNAGG 1 cut(s) 597
BsuRI GGCC 3 cut(s) 28, 1001, 1007
BtgI CCRYGG 2 cut(s) 33, 570
BtsCI GGATG 3 cut(s) 262, 391, 843
BtsIMutI CAGTG 2 cut(s) 385, 549
BveI ACCTGC 1 cut(s) 1003
Cac8I GCNNGC 2 cut(s) 30, 1033
CaiI CAGNNNCTG 1 cut(s) 432
CfoI GCGC 1 cut(s) 394
Cfr13I GGNCC 3 cut(s) 26, 1005, 1063
Csp6I GTAC 3 cut(s) 67, 227, 754
CviAII CATG 9 cut(s) 34, 40, 49, 437, 670, 898, 913, 946, 1054
CviQI GTAC 3 cut(s) 67, 227, 754
DdeI CTNAG 5 cut(s) 534, 541, 597, 822, 849
DpnI GATC 7 cut(s) 47, 63, 699, 854, 894, 939, 1077
DpnII GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
DraI TTTAAA 1 cut(s) 510
DriI GACNNNNNGTC 1 cut(s) 1069
EaeI YGGCCR 1 cut(s) 999
EagI CGGCCG 1 cut(s) 999
Eam1104I CTCTTC 2 cut(s) 827, 924
Eam1105I GACNNNNNGTC 1 cut(s) 1069
EarI CTCTTC 2 cut(s) 827, 924
Ecl136II GAGCTC 1 cut(s) 346
EclXI CGGCCG 1 cut(s) 999
Eco130I CCWWGG 1 cut(s) 33
Eco24I GRGCYC 2 cut(s) 348, 828
Eco47I GGWCC 1 cut(s) 1063
Eco52I CGGCCG 1 cut(s) 999
Eco53kI GAGCTC 1 cut(s) 346
Eco81I CCTNAGG 1 cut(s) 597
Eco88I CYCGRG 2 cut(s) 827, 1067
Eco91I GGTNACC 1 cut(s) 655
EcoICRI GAGCTC 1 cut(s) 346
EcoO109I RGGNCCY 1 cut(s) 1063
EcoO65I GGTNACC 1 cut(s) 655
EcoRII CCWGG 2 cut(s) 700, 1038
EcoT14I CCWWGG 1 cut(s) 33
EcoT22I ATGCAT 1 cut(s) 334
EcoT38I GRGCYC 2 cut(s) 348, 828
ErhI CCWWGG 1 cut(s) 33
FaeI CATG 9 cut(s) 37, 43, 52, 440, 673, 901, 916, 949, 1057
FaqI GGGAC 2 cut(s) 137, 473
FatI CATG 9 cut(s) 33, 39, 48, 436, 669, 897, 912, 945, 1053
Fnu4HI GCNGC 5 cut(s) 548, 793, 999, 1036, 1099
FokI GGATG 3 cut(s) 249, 398, 830
FriOI GRGCYC 2 cut(s) 348, 828
Fsp4HI GCNGC 5 cut(s) 548, 793, 999, 1036, 1099
GlaI GCGC 1 cut(s) 393
GluI GCNGC 5 cut(s) 548, 793, 999, 1036, 1099
GsaI CCCAGC 1 cut(s) 372
HaeIII GGCC 3 cut(s) 28, 1001, 1007
HapII CCGG 6 cut(s) 277, 457, 736, 785, 935, 1002
HhaI GCGC 1 cut(s) 394
Hin1II CATG 9 cut(s) 37, 43, 52, 440, 673, 901, 916, 949, 1057
Hin6I GCGC 1 cut(s) 392
HinP1I GCGC 1 cut(s) 392
HinfI GANTC 3 cut(s) 4, 423, 1070
HpaII CCGG 6 cut(s) 277, 457, 736, 785, 935, 1002
HphI GGTGA 3 cut(s) 149, 182, 667
Hpy188I TCNGA 2 cut(s) 267, 1075
Hpy188III TCNNGA 8 cut(s) 80, 93, 420, 610, 764, 785, 856, 1079
HpyAV CCTTC 2 cut(s) 169, 893
HpyCH4III ACNGT 4 cut(s) 22, 434, 571, 1013
HpyCH4IV ACGT 1 cut(s) 666
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 352, 590, 1004
HpyF3I CTNAG 5 cut(s) 534, 541, 597, 822, 849
HpySE526I ACGT 1 cut(s) 666
Hsp92II CATG 9 cut(s) 37, 43, 52, 440, 673, 901, 916, 949, 1057
HspAI GCGC 1 cut(s) 392
Kpn2I TCCGGA 1 cut(s) 784
Kzo9I GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
LguI GCTCTTC 1 cut(s) 924
LmnI GCTCC 2 cut(s) 505, 706
Lsp1109I GCAGC 3 cut(s) 534, 1047, 1110
LweI GCATC 2 cut(s) 271, 341
MaeII ACGT 1 cut(s) 666
MaeIII GTNAC 4 cut(s) 428, 518, 603, 655
MalI GATC 7 cut(s) 47, 63, 699, 854, 894, 939, 1077
MboI GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
MboII GAAGA 5 cut(s) 391, 394, 707, 844, 941
MflI RGATCY 2 cut(s) 697, 892
MhlI GDGCHC 4 cut(s) 18, 348, 578, 828
MluCI AATT 4 cut(s) 97, 237, 975, 1119
MlyI GAGTC 2 cut(s) 432, 1079
MmeI TCCRAC 1 cut(s) 450
Mph1103I ATGCAT 1 cut(s) 334
MroI TCCGGA 1 cut(s) 784
MroXI GAANNNNTTC 1 cut(s) 870
MseI TTAA 3 cut(s) 296, 509, 1123
MslI CAYNNNNRTG 2 cut(s) 38, 674
MspA1I CMGCKG 1 cut(s) 1101
MspI CCGG 6 cut(s) 277, 457, 736, 785, 935, 1002
MspR9I CCNGG 4 cut(s) 458, 702, 1003, 1040
Mva1269I GAATGC 1 cut(s) 550
MvaI CCWGG 2 cut(s) 702, 1040
MvnI CGCG 1 cut(s) 394
MwoI GCNNNNNNNGC 4 cut(s) 49, 352, 590, 1004
NciI CCSGG 2 cut(s) 458, 1003
NcoI CCATGG 1 cut(s) 33
NdeII GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
NlaIII CATG 9 cut(s) 37, 43, 52, 440, 673, 901, 916, 949, 1057
NlaIV GGNNCC 4 cut(s) 577, 708, 860, 1006
NmeAIII GCCGAG 1 cut(s) 1006
NmuCI GTSAC 2 cut(s) 518, 655
NsiI ATGCAT 1 cut(s) 334
NspI RCATGY 1 cut(s) 43
NspV TTCGAA 1 cut(s) 201
PaeR7I CTCGAG 1 cut(s) 1067
PciSI GCTCTTC 1 cut(s) 924
PctI GAATGC 1 cut(s) 550
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 5 cut(s) 549, 794, 1000, 1037, 1100
Ple19I CGATCG 1 cut(s) 64
PleI GAGTC 2 cut(s) 431, 1078
PpsI GAGTC 2 cut(s) 431, 1078
PpuMI RGGWCCY 1 cut(s) 1063
PsiI TTATAA 1 cut(s) 242
Psp124BI GAGCTC 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 1063
Psp6I CCWGG 2 cut(s) 700, 1038
PspEI GGTNACC 1 cut(s) 655
PspFI CCCAGC 1 cut(s) 368
PspGI CCWGG 2 cut(s) 700, 1038
PspN4I GGNNCC 4 cut(s) 577, 708, 860, 1006
PspPI GGNCC 3 cut(s) 26, 1005, 1063
PspPPI RGGWCCY 1 cut(s) 1063
PspXI VCTCGAGB 1 cut(s) 1067
PstNI CAGNNNCTG 1 cut(s) 432
PsuI RGATCY 2 cut(s) 697, 892
PvuI CGATCG 1 cut(s) 64
RsaI GTAC 3 cut(s) 68, 228, 755
RsaNI GTAC 3 cut(s) 67, 227, 754
RseI CAYNNNNRTG 2 cut(s) 38, 674
SacI GAGCTC 1 cut(s) 348
SapI GCTCTTC 1 cut(s) 924
SaqAI TTAA 3 cut(s) 296, 509, 1123
SatI GCNGC 5 cut(s) 548, 793, 999, 1036, 1099
Sau3AI GATC 7 cut(s) 45, 61, 697, 852, 892, 937, 1075
Sau96I GGNCC 3 cut(s) 26, 1005, 1063
ScaI AGTACT 1 cut(s) 755
SchI GAGTC 2 cut(s) 432, 1079
ScrFI CCNGG 4 cut(s) 458, 702, 1003, 1040
SduI GDGCHC 4 cut(s) 18, 348, 578, 828
SfaNI GCATC 2 cut(s) 271, 341
Sfr274I CTCGAG 1 cut(s) 1067
SfuI TTCGAA 1 cut(s) 201
SinI GGWCC 1 cut(s) 1063
SlaI CTCGAG 1 cut(s) 1067
SmiMI CAYNNNNRTG 2 cut(s) 38, 674
SmlI CTYRAG 2 cut(s) 608, 1067
SmoI CTYRAG 2 cut(s) 608, 1067
Sse9I AATT 4 cut(s) 97, 237, 975, 1119
SsiI CCGC 4 cut(s) 721, 793, 998, 1101
SspI AATATT 1 cut(s) 294
SstI GAGCTC 1 cut(s) 348
StyD4I CCNGG 4 cut(s) 456, 700, 1001, 1038
StyI CCWWGG 1 cut(s) 33
TaaI ACNGT 4 cut(s) 22, 434, 571, 1013
TaiI ACGT 1 cut(s) 669
TaqI TCGA 3 cut(s) 201, 566, 1068
TasI AATT 4 cut(s) 97, 237, 975, 1119
TatI WGTACW 2 cut(s) 226, 753
TauI GCSGC 2 cut(s) 795, 1001
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 3 cut(s) 296, 509, 1123
Tru9I TTAA 3 cut(s) 296, 509, 1123
TscAI CASTG 2 cut(s) 385, 549
TseFI GTSAC 2 cut(s) 518, 655
TseI GCWGC 3 cut(s) 547, 1035, 1098
Tsp45I GTSAC 2 cut(s) 518, 655
TspDTI ATGAA 4 cut(s) 17, 234, 764, 929
TspRI CASTG 2 cut(s) 385, 549
VpaK11BI GGWCC 1 cut(s) 1063
XapI RAATTY 1 cut(s) 97
XceI RCATGY 1 cut(s) 43
XcmI CCANNNNNNNNNTGG 1 cut(s) 1028
XhoI CTCGAG 1 cut(s) 1067
XmnI GAANNNNTTC 1 cut(s) 870
ZrmI AGTACT 1 cut(s) 755
Zsp2I ATGCAT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.