Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014892

Physical Location & Seq

Genomic Coordinates Reverse (-)

14305181 .. 14310468

Gene Structure 5288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G115900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGATCGGTCTGTGCTCACAGTTGGGCCAGGCATGGACATGCCGATCATGCATGACAGCGATCGGTACGAGCTCGTTCGTGATATTGGGTCGGGAAATTTCGGGGTTGCCAGGCTTATGAGGGACAAGCAGACTGATGAGCTTGTTGCTGTGAAATATATAGAGAGAGGTGAGAAGATAGATGAAAATGTACAAAGAGAAATTATAAACCACAGGTCATTGAGGCACCCAAACATTGTCCGATTCAAAGAGGTAATATTAACCCCTACTCATCTGGCTATTGTGATGGAGTATGCATCTGGAGGAGAGCTCTTTGAGCGGATATGCAATGCTGGGCGGTTCAGCGAGGATGAGGCACGCTTCTTTTTCCAACAACTTATATCAGGAGTCAGTTACTGTCATGCAATGCAAGTGTGCCATCGGGACTTGAAGTTGGAGAACACATTGTTAGATGGAAGTCCAGCTCCTCGTTTAAAAATATGTGACTTTGGCTACTCAAAGTCCTCGGTGCTGCATTCACAACCAAAATCAACCGTTGGCACCCCTGCATATATTGCTCCTGAAGTGTTACTTAAGAAAGAATATGATGGCAAGATTGCAGATGTCTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATACCCATTTGAGGATCCTGGGGAGCCTAAAAACTTCCGCAAGACAATACATCGTATAACAAATGTCCAGTACTCGATTCCTGACTATGTTCACATATCTCCAGAGTGCCGCCATCTAATCTCAAGGATTTTTGTTGCGGAACCAGAGAAGAGGATAACCATTCCTGAGATTAGGAACCATGAGTGGTTTTTGAAGAACCTTCCAGCAGATCTCATGGTTGAAAACACCACAAACAGCCAGTTTGAAGAGCCTGATCAACCCATGCAAAGCATTGATGAGATCATGCAGATAATTGCTGAGGCTACAATACCTGCGGCTGGGACGAACAGCCTCAACCAGTATCTTGCTGGCAGCCTGGACATTGATAACATGGAGGAGGATCTGGAGTCTGATCCCGACATCGACATTGACAGCAGCGGAGAGATAGTTTATGCAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Pkinase

Protein Analysis

363

Amino Acids

41.04

Weight (kDa)

4.92

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33950 AT4G33950
fragaria_vesca	FvH4_2g06910 FvH4_2g06910
malus_domestica	MD10G1089100.v1.1
prunus_persica	Prupe.8G115900_v2.0.a1 Prupe.8G115900_v2.0.a1 Prupe.8G115900_v2.0.a1
pyrus_communis	pycom10g07200
rosa_chinensis	RchiOBHm_Chr6g0259231
rosa_laevigata	RLG00000014547
rosa_rugosa	Rorug05G0586300
rosa_samantha	Rh6AG103000 Rh6BG095300 Rh6DG086200
rosa_wichuraiana	Rw6G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	206
Acc36I	ACCTGC	1 cut(s)	967
AccB1I	GGYRCC	2 cut(s)	225, 539
AccBSI	CCGCTC	1 cut(s)	319
AciI	CCGC	7 cut(s)	319, 337, 685, 757, 785, 962, 1065
AclWI	GGATC	5 cut(s)	12, 656, 669, 1034, 1035
AcsI	RAATTY	1 cut(s)	97
AcuI	CTGAAG	1 cut(s)	582
AfaI	GTAC	3 cut(s)	68, 192, 719
AfiI	CCNNNNNNNGG	2 cut(s)	658, 965
AflII	CTTAAG	1 cut(s)	572
AgsI	TTSAA	5 cut(s)	247, 430, 841, 869, 893
AjnI	CCWGG	4 cut(s)	28, 110, 664, 1002
AluBI	AGCT	4 cut(s)	73, 142, 310, 464
AluI	AGCT	4 cut(s)	73, 142, 310, 464
Alw21I	GWGCWC	3 cut(s)	18, 75, 312
AlwI	GGATC	5 cut(s)	12, 656, 669, 1034, 1035
AlwNI	CAGNNNCTG	1 cut(s)	396
AoxI	GGCC	1 cut(s)	26
ApeKI	GCWGC	3 cut(s)	511, 999, 1062
ApoI	RAATTY	1 cut(s)	97
AspS9I	GGNCC	1 cut(s)	26
AsuHPI	GGTGA	2 cut(s)	182, 631
BamHI	GGATCC	1 cut(s)	661
BanI	GGYRCC	2 cut(s)	225, 539
BanII	GRGCYC	2 cut(s)	75, 312
Bbv12I	GWGCWC	3 cut(s)	18, 75, 312
BbvCI	CCTCAGC	1 cut(s)	945
BbvI	GCAGC	3 cut(s)	498, 1011, 1074
BccI	CCATC	5 cut(s)	280, 426, 446, 581, 768
BciT130I	CCWGG	4 cut(s)	30, 112, 666, 1004
BclI	TGATCA	1 cut(s)	901
BfrI	CTTAAG	1 cut(s)	572
BfuAI	ACCTGC	1 cut(s)	967
BglII	AGATCT	1 cut(s)	856
BisI	GCNGC	5 cut(s)	512, 757, 963, 1000, 1063
BlsI	GCNGC	5 cut(s)	513, 758, 964, 1001, 1064
BmcAI	AGTACT	1 cut(s)	719
Bme1390I	CCNGG	4 cut(s)	30, 112, 666, 1004
BmgT120I	GGNCC	1 cut(s)	26
BmiI	GGNNCC	6 cut(s)	227, 541, 663, 672, 789, 824
BmrFI	CCNGG	4 cut(s)	30, 112, 666, 1004
BmsI	GCATC	1 cut(s)	305
BplI	GAGNNNNNCTC	2 cut(s)	294, 326
BpmI	CTGGAG	3 cut(s)	321, 732, 1052
Bpu10I	CCTNAGC	1 cut(s)	945
BpuEI	CTTGAG	1 cut(s)	754
BsaJI	CCNNGG	2 cut(s)	504, 665
BsaXI	ACNNNNNCTCC	2 cut(s)	1059, 1089
Bsc4I	CCNNNNNNNGG	2 cut(s)	658, 965
Bse1I	ACTGG	3 cut(s)	715, 886, 985
Bse3DI	GCAATG	2 cut(s)	334, 411
BseBI	CCWGG	4 cut(s)	30, 112, 666, 1004
BseDI	CCNNGG	2 cut(s)	504, 665
BseGI	GGATG	1 cut(s)	355
BseLI	CCNNNNNNNGG	2 cut(s)	658, 965
BseMI	GCAATG	2 cut(s)	334, 411
BseMII	CTCAG	2 cut(s)	804, 936
BseNI	ACTGG	3 cut(s)	715, 886, 985
BseRI	GAGGAG	3 cut(s)	318, 456, 1037
BseXI	GCAGC	3 cut(s)	498, 1011, 1074
BseYI	CCCAGC	2 cut(s)	332, 965
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	1 cut(s)	28
BshNI	GGYRCC	2 cut(s)	225, 539
BsiEI	CGRYCG	1 cut(s)	64
BsiHKAI	GWGCWC	3 cut(s)	18, 75, 312
BslFI	GGGAC	3 cut(s)	137, 437, 982
BslI	CCNNNNNNNGG	2 cut(s)	658, 965
BsmFI	GGGAC	3 cut(s)	137, 437, 982
BsmI	GAATGC	1 cut(s)	514
BsnI	GGCC	1 cut(s)	28
Bsp1286I	GDGCHC	3 cut(s)	18, 75, 312
Bsp1407I	TGTACA	1 cut(s)	190
Bsp143I	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
BspACI	CCGC	7 cut(s)	319, 337, 685, 757, 785, 962, 1065
BspANI	GGCC	1 cut(s)	28
BspCNI	CTCAG	2 cut(s)	805, 937
BspLI	GGNNCC	6 cut(s)	227, 541, 663, 672, 789, 824
BspMI	ACCTGC	1 cut(s)	967
BspPI	GGATC	5 cut(s)	12, 656, 669, 1034, 1035
BspQI	GCTCTTC	1 cut(s)	888
BspT107I	GGYRCC	2 cut(s)	225, 539
BspTI	CTTAAG	1 cut(s)	572
BsrBI	CCGCTC	1 cut(s)	319
BsrDI	GCAATG	2 cut(s)	334, 411
BsrGI	TGTACA	1 cut(s)	190
BsrI	ACTGG	3 cut(s)	715, 886, 985
BssECI	CCNNGG	2 cut(s)	504, 665
BssMI	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
Bst2UI	CCWGG	4 cut(s)	30, 112, 666, 1004
Bst4CI	ACNGT	3 cut(s)	22, 398, 535
Bst6I	CTCTTC	2 cut(s)	791, 888
BstAFI	CTTAAG	1 cut(s)	572
BstAPI	GCANNNNNTGC	1 cut(s)	554
BstAUI	TGTACA	1 cut(s)	190
BstC8I	GCNNGC	2 cut(s)	358, 997
BstDEI	CTNAG	2 cut(s)	813, 945
BstEII	GGTNACC	1 cut(s)	619
BstF5I	GGATG	1 cut(s)	355
BstKTI	GATC	9 cut(s)	7, 48, 64, 664, 859, 904, 930, 1030, 1042
BstMBI	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 316, 554
BstNI	CCWGG	4 cut(s)	30, 112, 666, 1004
BstNSI	RCATGY	1 cut(s)	43
BstPI	GGTNACC	1 cut(s)	619
BstSCI	CCNGG	4 cut(s)	28, 110, 664, 1002
BstV1I	GCAGC	3 cut(s)	498, 1011, 1074
BstX2I	RGATCY	3 cut(s)	661, 856, 1027
BstYI	RGATCY	3 cut(s)	661, 856, 1027
BsuRI	GGCC	1 cut(s)	28
BtsCI	GGATG	1 cut(s)	355
BveI	ACCTGC	1 cut(s)	967
Cac8I	GCNNGC	2 cut(s)	358, 997
CaiI	CAGNNNCTG	1 cut(s)	396
Cfr13I	GGNCC	1 cut(s)	26
Csp6I	GTAC	3 cut(s)	67, 191, 718
CviQI	GTAC	3 cut(s)	67, 191, 718
DdeI	CTNAG	2 cut(s)	813, 945
DpnI	GATC	9 cut(s)	6, 47, 63, 663, 858, 903, 929, 1029, 1041
DpnII	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
DraI	TTTAAA	1 cut(s)	474
Eam1104I	CTCTTC	2 cut(s)	791, 888
EarI	CTCTTC	2 cut(s)	791, 888
Ecl136II	GAGCTC	2 cut(s)	73, 310
Eco24I	GRGCYC	2 cut(s)	75, 312
Eco53kI	GAGCTC	2 cut(s)	73, 310
Eco57I	CTGAAG	1 cut(s)	582
Eco91I	GGTNACC	1 cut(s)	619
EcoICRI	GAGCTC	2 cut(s)	73, 310
EcoO65I	GGTNACC	1 cut(s)	619
EcoRII	CCWGG	4 cut(s)	28, 110, 664, 1002
EcoT22I	ATGCAT	2 cut(s)	54, 298
EcoT38I	GRGCYC	2 cut(s)	75, 312
FalI	AAGNNNNNCTT	2 cut(s)	555, 587
FaqI	GGGAC	3 cut(s)	137, 437, 982
FbaI	TGATCA	1 cut(s)	901
Fnu4HI	GCNGC	5 cut(s)	512, 757, 963, 1000, 1063
FokI	GGATG	1 cut(s)	362
FriOI	GRGCYC	2 cut(s)	75, 312
Fsp4HI	GCNGC	5 cut(s)	512, 757, 963, 1000, 1063
GluI	GCNGC	5 cut(s)	512, 757, 963, 1000, 1063
GsaI	CCCAGC	2 cut(s)	336, 969
GsuI	CTGGAG	3 cut(s)	321, 732, 1052
HaeIII	GGCC	1 cut(s)	28
HinfI	GANTC	4 cut(s)	243, 387, 724, 1034
HphI	GGTGA	2 cut(s)	182, 631
Hpy166II	GTNNAC	1 cut(s)	739
Hpy188I	TCNGA	2 cut(s)	242, 1039
Hpy8I	GTNNAC	1 cut(s)	739
HpyAV	CCTTC	1 cut(s)	857
HpyCH4III	ACNGT	3 cut(s)	22, 398, 535
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 316, 554
HpyF3I	CTNAG	2 cut(s)	813, 945
Ksp22I	TGATCA	1 cut(s)	901
Kzo9I	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	3 cut(s)	469, 562, 670
Lsp1109I	GCAGC	3 cut(s)	498, 1011, 1074
LweI	GCATC	1 cut(s)	305
MaeIII	GTNAC	4 cut(s)	392, 482, 567, 619
MalI	GATC	9 cut(s)	6, 47, 63, 663, 858, 903, 929, 1029, 1041
MbiI	CCGCTC	1 cut(s)	319
MboI	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
MboII	GAAGA	4 cut(s)	187, 808, 853, 905
MflI	RGATCY	3 cut(s)	661, 856, 1027
MhlI	GDGCHC	3 cut(s)	18, 75, 312
MluCI	AATT	3 cut(s)	97, 201, 939
MlyI	GAGTC	2 cut(s)	396, 1043
MmeI	TCCRAC	2 cut(s)	394, 414
Mph1103I	ATGCAT	2 cut(s)	54, 298
MseI	TTAA	3 cut(s)	260, 473, 573
MslI	CAYNNNNRTG	2 cut(s)	38, 638
MspA1I	CMGCKG	1 cut(s)	1065
MspCI	CTTAAG	1 cut(s)	572
MspR9I	CCNGG	4 cut(s)	30, 112, 666, 1004
Mva1269I	GAATGC	1 cut(s)	514
MvaI	CCWGG	4 cut(s)	30, 112, 666, 1004
MwoI	GCNNNNNNNGC	3 cut(s)	49, 316, 554
NdeII	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
NlaIV	GGNNCC	6 cut(s)	227, 541, 663, 672, 789, 824
NmuCI	GTSAC	2 cut(s)	482, 619
NsiI	ATGCAT	2 cut(s)	54, 298
NspI	RCATGY	1 cut(s)	43
PciSI	GCTCTTC	1 cut(s)	888
PctI	GAATGC	1 cut(s)	514
PfeI	GAWTC	2 cut(s)	243, 724
PkrI	GCNGC	5 cut(s)	513, 758, 964, 1001, 1064
Ple19I	CGATCG	1 cut(s)	64
PleI	GAGTC	2 cut(s)	395, 1042
PpsI	GAGTC	2 cut(s)	395, 1042
PsiI	TTATAA	1 cut(s)	206
Psp124BI	GAGCTC	2 cut(s)	75, 312
Psp6I	CCWGG	4 cut(s)	28, 110, 664, 1002
PspEI	GGTNACC	1 cut(s)	619
PspFI	CCCAGC	2 cut(s)	332, 965
PspGI	CCWGG	4 cut(s)	28, 110, 664, 1002
PspN4I	GGNNCC	6 cut(s)	227, 541, 663, 672, 789, 824
PspPI	GGNCC	1 cut(s)	26
PstNI	CAGNNNCTG	1 cut(s)	396
PsuI	RGATCY	3 cut(s)	661, 856, 1027
PvuI	CGATCG	1 cut(s)	64
RsaI	GTAC	3 cut(s)	68, 192, 719
RsaNI	GTAC	3 cut(s)	67, 191, 718
RseI	CAYNNNNRTG	2 cut(s)	38, 638
SacI	GAGCTC	2 cut(s)	75, 312
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	3 cut(s)	260, 473, 573
SatI	GCNGC	5 cut(s)	512, 757, 963, 1000, 1063
Sau3AI	GATC	9 cut(s)	4, 45, 61, 661, 856, 901, 927, 1027, 1039
Sau96I	GGNCC	1 cut(s)	26
ScaI	AGTACT	1 cut(s)	719
SchI	GAGTC	2 cut(s)	396, 1043
ScrFI	CCNGG	4 cut(s)	30, 112, 666, 1004
SduI	GDGCHC	3 cut(s)	18, 75, 312
SfaNI	GCATC	1 cut(s)	305
SmiMI	CAYNNNNRTG	2 cut(s)	38, 638
SmlI	CTYRAG	2 cut(s)	572, 769
SmoI	CTYRAG	2 cut(s)	572, 769
Sse9I	AATT	3 cut(s)	97, 201, 939
SsiI	CCGC	7 cut(s)	319, 337, 685, 757, 785, 962, 1065
SspI	AATATT	1 cut(s)	258
SstI	GAGCTC	2 cut(s)	75, 312
StyD4I	CCNGG	4 cut(s)	28, 110, 664, 1002
TaaI	ACNGT	3 cut(s)	22, 398, 535
TaqI	TCGA	2 cut(s)	722, 1050
TasI	AATT	3 cut(s)	97, 201, 939
TatI	WGTACW	2 cut(s)	190, 717
TauI	GCSGC	2 cut(s)	759, 965
TfiI	GAWTC	2 cut(s)	243, 724
Tru1I	TTAA	3 cut(s)	260, 473, 573
Tru9I	TTAA	3 cut(s)	260, 473, 573
TseFI	GTSAC	2 cut(s)	482, 619
TseI	GCWGC	3 cut(s)	511, 999, 1062
Tsp45I	GTSAC	2 cut(s)	482, 619
TspDTI	ATGAA	1 cut(s)	198
Vha464I	CTTAAG	1 cut(s)	572
XapI	RAATTY	1 cut(s)	97
XceI	RCATGY	1 cut(s)	43
XcmI	CCANNNNNNNNNTGG	1 cut(s)	992
ZrmI	AGTACT	1 cut(s)	719
Zsp2I	ATGCAT	2 cut(s)	54, 298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.