MD10G1322000.v1.1

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
40364589 .. 40367614
3026 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1322000.v1.1.491

Sequence Viewer

Length: 1209 bp
ATGTCTGTGAAGAGCAGAGGATGGGGAGGAGAGGTAACAGTGAGGAATGTGATGTCAAGGAACTGGGCACTTTTGCTTTGCTTTTGCAGCTTCTGTGCTGGAGTTTTATTTACCAACAGGTTGTGGATGGTGCCTGAATCAAGGCCATCGCGAATTGGATCTGAAAAGATATTTTCCGAATCTGATGCGTGTGATCATAAGCTTGTTATAAAGCACACGGCTCGTGACAGTTCAGGGGAAGCTACTAATCAAGTGATTCAGGAGCTAAATAAAACGGTTTCAAATTTGGAGATGAAGTTAGCCGCTGTTAGGGCAACGCATGAATCTGTACATAATGGATATCCTACGTCTGGAAACTTGAAAACTGTTCAATCAGCTTCGAAGAAAAAGTACTTCATGGTTATAGGGATCAATACAGCTTTTAATAGCCGAAAAAGAAGAGATTCAGTACGTGCAACTTGGATGCCGCAAGGTGAGGATAGAAAGAAGCTGGAAGAAGAGAAGGGCATAATCATACGGTTTGTCATAGGTCACAGTCCGACAGCTGGTGGTATTCTTGATAAAGCGGTTGAAGCAGAGGAGCTCGCCCATGGAGACTTCTTGAGGCTGGACCATGTAGAGGGATACCTGGAATTATCAGCCAAAACAAAGACGTATTTTTCGACAGCAGTTGCCTTGTGGGATGCTGAATTTTATATCAAAGTTGACGATGACATCCATGTAAATTTAGCAACGCTTGGAACGATTTTATCTAGACACCGTCTGAAACCCCGAGTCTATATTGGTTGCATGAAGTCGGGTCCAGTCCTTGCTCGAAAGGGAGTGAAATACCATGAGCCAGAGTTTTGGAAATTTGGTGAGATAGGAAACAAGTATTTTCGGCATGCTACAGGGCAGTTATATGCCATCTCGAAAGATTTGGCAACTTACATATCAAGAAACCAGGATGTGCTGCACAAATATGCCAATGAAGATGTTTCGTTGGGAGCTTGGTTTATTGGTTTAGACGTAGAACAGGTGGACGATAGAAGACTATGTTGTGGTACCCCGCCAGATTGTATGTGGAAGGCAATGACAGGCAACACCTGCGCTGCTTCATTTGATTGGCGATGCAGCGGGATTTGCAAGTCTGTTGAGAGGATGATGGGCGTTCACGAGCGCTGTGGTGAAGACAAGAATGCTATTTGGAGTGCAAGATTTTCTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

403

Amino Acids

45.29

Weight (kDa)

8.88

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4094 PF13334 19 - 105 6.9e-22 Domain of unknown function (DUF4094)
Galactosyl_T PF01762 145 - 341 1.4e-47 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 209
AarI CACCTGC 1 cut(s) 1094
Acc36I ACCTGC 1 cut(s) 1094
Acc65I GGTACC 1 cut(s) 1043
AccB1I GGYRCC 2 cut(s) 130, 1043
AccII CGCG 1 cut(s) 151
AciI CCGC 5 cut(s) 303, 467, 566, 1049, 1116
AclWI GGATC 2 cut(s) 166, 416
AcsI RAATTY 4 cut(s) 283, 689, 724, 851
AfaI GTAC 4 cut(s) 330, 392, 450, 1045
AfeI AGCGCT 1 cut(s) 1160
AfiI CCNNNNNNNGG 4 cut(s) 309, 350, 545, 619
AgsI TTSAA 4 cut(s) 282, 361, 371, 572
AjnI CCWGG 2 cut(s) 627, 942
Alw21I GWGCWC 1 cut(s) 585
Alw26I GTCTC 1 cut(s) 588
AlwI GGATC 2 cut(s) 166, 416
AlwNI CAGNNNCTG 1 cut(s) 93
Ama87I CYCGRG 1 cut(s) 771
Aor51HI AGCGCT 1 cut(s) 1160
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 4 cut(s) 87, 952, 1091, 1113
ApoI RAATTY 4 cut(s) 283, 689, 724, 851
ArsI GACNNNNNNTTYG 2 cut(s) 643, 675
Asp700I GAANNNNTTC 1 cut(s) 442
Asp718I GGTACC 1 cut(s) 1043
AspLEI GCGC 2 cut(s) 1091, 1161
AspS9I GGNCC 2 cut(s) 610, 800
AsuHPI GGTGA 3 cut(s) 485, 869, 1178
AsuII TTCGAA 1 cut(s) 380
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 2 cut(s) 610, 800
BaeGI GKGCMC 1 cut(s) 70
BanI GGYRCC 2 cut(s) 130, 1043
BanII GRGCYC 1 cut(s) 585
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
BauI CACGAG 2 cut(s) 222, 1154
BbsI GAAGAC 2 cut(s) 1036, 1176
Bbv12I GWGCWC 1 cut(s) 585
BbvI GCAGC 4 cut(s) 99, 939, 1078, 1125
BccI CCATC 5 cut(s) 15, 121, 154, 914, 1138
BceAI ACGGC 1 cut(s) 234
BcgI CGANNNNNNTGC 4 cut(s) 167, 201, 203, 237
BciT130I CCWGG 2 cut(s) 629, 944
BciVI GTATCC 1 cut(s) 617
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 1 cut(s) 588
BfaI CTAG 1 cut(s) 753
BfmI CTRYAG 1 cut(s) 888
BfoI RGCGCY 1 cut(s) 1162
BfuAI ACCTGC 1 cut(s) 1094
BfuI GTATCC 1 cut(s) 617
BisI GCNGC 6 cut(s) 88, 303, 467, 953, 1092, 1114
BlsI GCNGC 6 cut(s) 89, 304, 468, 954, 1093, 1115
BmcAI AGTACT 1 cut(s) 392
Bme1390I CCNGG 2 cut(s) 629, 944
Bme18I GGWCC 2 cut(s) 610, 800
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 2 cut(s) 610, 800
BmiI GGNNCC 3 cut(s) 132, 801, 1045
BmrFI CCNGG 2 cut(s) 629, 944
BmrI ACTGGG 1 cut(s) 73
BmsI GCATC 4 cut(s) 175, 453, 673, 1100
BmuI ACTGGG 1 cut(s) 73
BpiI GAAGAC 2 cut(s) 1036, 1176
BpmI CTGGAG 1 cut(s) 120
Bpu14I TTCGAA 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 622
BsaAI YACGTR 1 cut(s) 452
BsaJI CCNNGG 1 cut(s) 589
BsaXI ACNNNNNCTCC 4 cut(s) 18, 48, 281, 311
Bsc4I CCNNNNNNNGG 4 cut(s) 309, 350, 545, 619
Bse1I ACTGG 2 cut(s) 68, 803
Bse3DI GCAATG 1 cut(s) 1077
BseBI CCWGG 2 cut(s) 629, 944
BseDI CCNNGG 1 cut(s) 589
BseGI GGATG 7 cut(s) 26, 132, 468, 688, 714, 952, 1146
BseLI CCNNNNNNNGG 4 cut(s) 309, 350, 545, 619
BseMI GCAATG 1 cut(s) 1077
BseNI ACTGG 2 cut(s) 68, 803
BseRI GAGGAG 2 cut(s) 42, 593
BseSI GKGCMC 1 cut(s) 70
BseXI GCAGC 4 cut(s) 99, 939, 1078, 1125
BsgI GTGCAG 1 cut(s) 938
Bsh1236I CGCG 1 cut(s) 151
BshFI GGCC 1 cut(s) 145
BshNI GGYRCC 2 cut(s) 130, 1043
BsiHKAI GWGCWC 1 cut(s) 585
BsiHKCI CYCGRG 1 cut(s) 771
BslI CCNNNNNNNGG 4 cut(s) 309, 350, 545, 619
BsmAI GTCTC 1 cut(s) 588
BsmI GAATGC 1 cut(s) 1183
BsnI GGCC 1 cut(s) 145
BsoBI CYCGRG 1 cut(s) 771
Bsp119I TTCGAA 1 cut(s) 380
Bsp1286I GDGCHC 2 cut(s) 70, 585
Bsp1407I TGTACA 1 cut(s) 328
Bsp143I GATC 3 cut(s) 158, 193, 408
Bsp19I CCATGG 1 cut(s) 589
Bsp68I TCGCGA 1 cut(s) 151
BspACI CCGC 5 cut(s) 303, 467, 566, 1049, 1116
BspANI GGCC 1 cut(s) 145
BspFNI CGCG 1 cut(s) 151
BspLI GGNNCC 3 cut(s) 132, 801, 1045
BspMI ACCTGC 1 cut(s) 1094
BspPI GGATC 2 cut(s) 166, 416
BspQI GCTCTTC 1 cut(s) 5
BspT104I TTCGAA 1 cut(s) 380
BspT107I GGYRCC 2 cut(s) 130, 1043
BsrDI GCAATG 1 cut(s) 1077
BsrGI TGTACA 1 cut(s) 328
BsrI ACTGG 2 cut(s) 68, 803
BssECI CCNNGG 1 cut(s) 589
BssMI GATC 3 cut(s) 158, 193, 408
BssSI CACGAG 2 cut(s) 222, 1154
BssT1I CCWWGG 1 cut(s) 589
Bst2BI CACGAG 2 cut(s) 222, 1154
Bst2UI CCWGG 2 cut(s) 629, 944
Bst4CI ACNGT 7 cut(s) 40, 230, 277, 367, 519, 536, 761
Bst6I CTCTTC 3 cut(s) 5, 433, 492
BstAPI GCANNNNNTGC 1 cut(s) 1086
BstAUI TGTACA 1 cut(s) 328
BstBAI YACGTR 1 cut(s) 452
BstBI TTCGAA 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 585, 885
BstDEI CTNAG 1 cut(s) 1203
BstDSI CCRYGG 1 cut(s) 589
BstF5I GGATG 7 cut(s) 26, 132, 468, 688, 714, 952, 1146
BstFNI CGCG 1 cut(s) 151
BstH2I RGCGCY 1 cut(s) 1162
BstHHI GCGC 2 cut(s) 1091, 1161
BstKTI GATC 3 cut(s) 161, 196, 411
BstMAI GTCTC 1 cut(s) 588
BstMBI GATC 3 cut(s) 158, 193, 408
BstMWI GCNNNNNNNGC 5 cut(s) 87, 311, 572, 1086, 1122
BstNI CCWGG 2 cut(s) 629, 944
BstNSI RCATGY 1 cut(s) 887
BstSCI CCNGG 2 cut(s) 627, 942
BstSFI CTRYAG 1 cut(s) 888
BstSLI GKGCMC 1 cut(s) 70
BstUI CGCG 1 cut(s) 151
BstV1I GCAGC 4 cut(s) 99, 939, 1078, 1125
BstV2I GAAGAC 2 cut(s) 1036, 1176
BstX2I RGATCY 1 cut(s) 158
BstXI CCANNNNNNTGG 1 cut(s) 846
BstYI RGATCY 1 cut(s) 158
BsuI GTATCC 1 cut(s) 617
BsuRI GGCC 1 cut(s) 145
BtgI CCRYGG 1 cut(s) 589
BtgZI GCGATG 2 cut(s) 132, 1123
BtsCI GGATG 7 cut(s) 26, 132, 468, 688, 714, 952, 1146
BtsIMutI CAGTG 1 cut(s) 45
BtuMI TCGCGA 1 cut(s) 151
BveI ACCTGC 1 cut(s) 1094
Cac8I GCNNGC 2 cut(s) 585, 885
CaiI CAGNNNCTG 1 cut(s) 93
CfoI GCGC 2 cut(s) 1091, 1161
Cfr13I GGNCC 2 cut(s) 610, 800
Csp6I GTAC 4 cut(s) 329, 391, 449, 1044
CviAII CATG 8 cut(s) 320, 397, 590, 614, 719, 790, 833, 884
CviQI GTAC 4 cut(s) 329, 391, 449, 1044
DdeI CTNAG 1 cut(s) 1203
DpnI GATC 3 cut(s) 160, 195, 410
DpnII GATC 3 cut(s) 158, 193, 408
Eam1104I CTCTTC 3 cut(s) 5, 433, 492
EarI CTCTTC 3 cut(s) 5, 433, 492
Ecl136II GAGCTC 1 cut(s) 583
Eco130I CCWWGG 1 cut(s) 589
Eco24I GRGCYC 1 cut(s) 585
Eco32I GATATC 1 cut(s) 341
Eco47I GGWCC 2 cut(s) 610, 800
Eco47III AGCGCT 1 cut(s) 1160
Eco53kI GAGCTC 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 771
EcoICRI GAGCTC 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 627, 942
EcoRV GATATC 1 cut(s) 341
EcoT14I CCWWGG 1 cut(s) 589
EcoT38I GRGCYC 1 cut(s) 585
ErhI CCWWGG 1 cut(s) 589
FaeI CATG 8 cut(s) 323, 400, 593, 617, 722, 793, 836, 887
FatI CATG 8 cut(s) 319, 396, 589, 613, 718, 789, 832, 883
FauI CCCGC 2 cut(s) 1056, 1109
FbaI TGATCA 1 cut(s) 193
Fnu4HI GCNGC 6 cut(s) 88, 303, 467, 953, 1092, 1114
FokI GGATG 7 cut(s) 33, 139, 475, 695, 701, 959, 1153
FriOI GRGCYC 1 cut(s) 585
Fsp4HI GCNGC 6 cut(s) 88, 303, 467, 953, 1092, 1114
FspBI CTAG 1 cut(s) 753
GlaI GCGC 2 cut(s) 1090, 1160
GluI GCNGC 6 cut(s) 88, 303, 467, 953, 1092, 1114
GsuI CTGGAG 1 cut(s) 120
HaeII RGCGCY 1 cut(s) 1162
HaeIII GGCC 1 cut(s) 145
HhaI GCGC 2 cut(s) 1091, 1161
Hin1II CATG 8 cut(s) 323, 400, 593, 617, 722, 793, 836, 887
Hin6I GCGC 2 cut(s) 1089, 1159
HinP1I GCGC 2 cut(s) 1089, 1159
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HindIII AAGCTT 1 cut(s) 200
HinfI GANTC 6 cut(s) 137, 179, 256, 323, 443, 774
HphI GGTGA 3 cut(s) 485, 869, 1178
Hpy166II GTNNAC 3 cut(s) 706, 1021, 1153
Hpy188I TCNGA 5 cut(s) 163, 178, 184, 540, 765
Hpy8I GTNNAC 3 cut(s) 706, 1021, 1153
HpyAV CCTTC 2 cut(s) 496, 1060
HpyCH4III ACNGT 7 cut(s) 40, 230, 277, 367, 519, 536, 761
HpyCH4IV ACGT 4 cut(s) 347, 451, 653, 1008
HpyCH4V TGCA 7 cut(s) 87, 455, 789, 955, 1113, 1125, 1193
HpyF10VI GCNNNNNNNGC 5 cut(s) 87, 311, 572, 1086, 1122
HpyF3I CTNAG 1 cut(s) 1203
HpySE526I ACGT 4 cut(s) 347, 451, 653, 1008
Hsp92II CATG 8 cut(s) 323, 400, 593, 617, 722, 793, 836, 887
HspAI GCGC 2 cut(s) 1089, 1159
KpnI GGTACC 1 cut(s) 1047
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 3 cut(s) 158, 193, 408
LguI GCTCTTC 1 cut(s) 5
LmnI GCTCC 3 cut(s) 262, 580, 986
Lsp1109I GCAGC 4 cut(s) 99, 939, 1078, 1125
LweI GCATC 4 cut(s) 175, 453, 673, 1100
MaeI CTAG 1 cut(s) 753
MaeII ACGT 4 cut(s) 347, 451, 653, 1008
MaeIII GTNAC 3 cut(s) 34, 224, 530
MalI GATC 3 cut(s) 160, 195, 410
MboI GATC 3 cut(s) 158, 193, 408
MboII GAAGA 8 cut(s) 22, 394, 450, 506, 509, 983, 1041, 1181
MflI RGATCY 1 cut(s) 158
MhlI GDGCHC 2 cut(s) 70, 585
MluCI AATT 6 cut(s) 153, 283, 632, 689, 724, 851
MlyI GAGTC 1 cut(s) 783
MmeI TCCRAC 1 cut(s) 563
MnlI CCTC 9 cut(s) 11, 20, 25, 36, 469, 571, 597, 613, 1131
MroXI GAANNNNTTC 1 cut(s) 442
MseI TTAA 1 cut(s) 423
MslI CAYNNNNRTG 1 cut(s) 960
MspA1I CMGCKG 3 cut(s) 305, 545, 1116
MspR9I CCNGG 2 cut(s) 629, 944
Mva1269I GAATGC 1 cut(s) 1183
MvaI CCWGG 2 cut(s) 629, 944
MvnI CGCG 1 cut(s) 151
MwoI GCNNNNNNNGC 5 cut(s) 87, 311, 572, 1086, 1122
NcoI CCATGG 1 cut(s) 589
NdeII GATC 3 cut(s) 158, 193, 408
NlaIII CATG 8 cut(s) 323, 400, 593, 617, 722, 793, 836, 887
NlaIV GGNNCC 3 cut(s) 132, 801, 1045
NmuCI GTSAC 2 cut(s) 224, 530
NruI TCGCGA 1 cut(s) 151
NspI RCATGY 1 cut(s) 887
NspV TTCGAA 1 cut(s) 380
PaeI GCATGC 1 cut(s) 887
PaqCI CACCTGC 1 cut(s) 1094
PciSI GCTCTTC 1 cut(s) 5
PcsI WCGNNNNNNNCGW 2 cut(s) 659, 740
PctI GAATGC 1 cut(s) 1183
PdmI GAANNNNTTC 1 cut(s) 442
PfeI GAWTC 5 cut(s) 137, 179, 256, 323, 443
PflFI GACNNNGTC 1 cut(s) 759
PkrI GCNGC 6 cut(s) 89, 304, 468, 954, 1093, 1115
PleI GAGTC 1 cut(s) 782
PpsI GAGTC 1 cut(s) 782
Ppu21I YACGTR 1 cut(s) 452
PsiI TTATAA 1 cut(s) 209
Psp124BI GAGCTC 1 cut(s) 585
Psp6I CCWGG 2 cut(s) 627, 942
PspGI CCWGG 2 cut(s) 627, 942
PspN4I GGNNCC 3 cut(s) 132, 801, 1045
PspPI GGNCC 2 cut(s) 610, 800
PstNI CAGNNNCTG 1 cut(s) 93
PsuI RGATCY 1 cut(s) 158
PsyI GACNNNGTC 1 cut(s) 759
PvuII CAGCTG 1 cut(s) 545
RruI TCGCGA 1 cut(s) 151
RsaI GTAC 4 cut(s) 330, 392, 450, 1045
RsaNI GTAC 4 cut(s) 329, 391, 449, 1044
RseI CAYNNNNRTG 1 cut(s) 960
SacI GAGCTC 1 cut(s) 585
SapI GCTCTTC 1 cut(s) 5
SaqAI TTAA 1 cut(s) 423
SatI GCNGC 6 cut(s) 88, 303, 467, 953, 1092, 1114
Sau3AI GATC 3 cut(s) 158, 193, 408
Sau96I GGNCC 2 cut(s) 610, 800
ScaI AGTACT 1 cut(s) 392
SchI GAGTC 1 cut(s) 783
ScrFI CCNGG 2 cut(s) 629, 944
SduI GDGCHC 2 cut(s) 70, 585
SfaNI GCATC 4 cut(s) 175, 453, 673, 1100
SfcI CTRYAG 1 cut(s) 888
SfuI TTCGAA 1 cut(s) 380
SinI GGWCC 2 cut(s) 610, 800
SmiMI CAYNNNNRTG 1 cut(s) 960
SmlI CTYRAG 1 cut(s) 601
SmoI CTYRAG 1 cut(s) 601
SphI GCATGC 1 cut(s) 887
Sse9I AATT 6 cut(s) 153, 283, 632, 689, 724, 851
SsiI CCGC 5 cut(s) 303, 467, 566, 1049, 1116
SspMI CTAG 1 cut(s) 753
SstI GAGCTC 1 cut(s) 585
StyD4I CCNGG 2 cut(s) 627, 942
StyI CCWWGG 1 cut(s) 589
TaaI ACNGT 7 cut(s) 40, 230, 277, 367, 519, 536, 761
TaiI ACGT 4 cut(s) 350, 454, 656, 1011
TaqI TCGA 4 cut(s) 380, 662, 814, 911
TasI AATT 6 cut(s) 153, 283, 632, 689, 724, 851
TatI WGTACW 2 cut(s) 328, 390
TauI GCSGC 2 cut(s) 305, 469
TfiI GAWTC 5 cut(s) 137, 179, 256, 323, 443
Tru1I TTAA 1 cut(s) 423
Tru9I TTAA 1 cut(s) 423
TscAI CASTG 1 cut(s) 45
TseFI GTSAC 2 cut(s) 224, 530
TseI GCWGC 4 cut(s) 87, 952, 1091, 1113
Tsp45I GTSAC 2 cut(s) 224, 530
TspDTI ATGAA 6 cut(s) 308, 336, 385, 806, 984, 1086
TspRI CASTG 1 cut(s) 45
Tth111I GACNNNGTC 1 cut(s) 759
VpaK11BI GGWCC 2 cut(s) 610, 800
XapI RAATTY 4 cut(s) 283, 689, 724, 851
XbaI TCTAGA 1 cut(s) 752
XceI RCATGY 1 cut(s) 887
XcmI CCANNNNNNNNNTGG 1 cut(s) 1059
XmnI GAANNNNTTC 1 cut(s) 442
XspI CTAG 1 cut(s) 753
ZrmI AGTACT 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.