MD11G1020700.v1.1

Selenoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0009575
Physical Location & Seq
Forward (+)
1803575 .. 1808541
4967 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1020700.v1.1.491

Sequence Viewer

Length: 1959 bp
ATGCAAATCCTTTCGCATTTCTCCTCTAAAGCCTCCTCCACACTCTCCTCACTTTCCCTCCCACGCCTCTCTCTATCTACCGCCCTCAACTTCCGCCGTCGCCCTTCCAAATTCCCATTTTACCCCTCCAACAACTTTGGAATTCCCAGGCTGCCCCTCCTCGCATGCAGCCTCAGCTCCGGCCGCAGCCAACAGCAAGCTCCCATGGACTCACCCCCGCCGGAGGCCACCGCCGCGTCGGTCGACTCCGTGACGCACGATTTGCAGAATCAGAGCTTGGCCGGCGATGAGAAGATTCGCAAGAGCGAGAGCAATGGTGTAAGTAACACTCAGAGGGTTAGGTTGAAGCTCGAAGATCTAAATTGGGACAACTCTTTTACCAGAGAGCTACCTGGCGATCCCCGGACTGATACGATTCCACGAGAGGTGTTGCATGCTTGTTATACGAAAGTGTCCCCGTCAGCTGAAGTCGAAAATCCTCAGCTTGTTGCATGGTCAGAATCAGTCGCCGAGTTTCTTGATTTGGATCCTAAAGAATTTGAAAGGCCAGACTTCCCTCTTTTATTCTCTGGGGCGTCTCCTTTAGTGGGATCGTTGCCTTATGCTCAATGCTATGGTGGACATCAATTCGGCATGTGGGCTGGGCAGTTGGGAGATGGGCGGGCTATTACTCTTGGGGAAGTTCTTAATTCTAAGTCTGAGAGATGGGAACTTCAGCTTAAAGGTGCTGGGAAGACTCCTTACAGTCGGTTTGCAGATGGCCTTGCTGTGCTTCGCAGTAGCATCCGGGAATTCCTCTGCAGTGAAGCAATTCATAATCTTGGAATTCCAACAACTCGAGCTCTCTGTCTTGTGACCACAGGAAAATTTGTCACGCGTGACATGTTCTATGATGGCAATCCAAAAGAGGAGCCCGGTGCAATTGTTTGCAGGGTTTCTCCATCATTTCTGCGTTTTGGGTCATACCAAATACACGCCACTAGAGAAAAAGAGGACCTTGAAATTGTTCGTACTCTTGCAGACTATGCCATTAGGCATCACTTTCCTCATATAGAGAACATGAGTAGAAGCGAGAGTTTATCTTTCAACACAGGCAATGAAGAAGTTCTTGATCTGACATCTAACAAGTATGCAGCTTGGGTGGTGGAGGTTGCTGAGCGTACTGCTTCCTTGGTTGCCAGATGGCAGGGGGTTGGTTTTACTCACGGTGTGTTGAACACTGACAATATGAGCATTTTGGGTCTTACCATTGATTATGGTCCTTTTGGATTTCTGGATGCATTTGATCCAAGTTACACACCAAATACCACGGATCTTCCTGGGAGGAGATATTGTTTTGCAAATCAGCCTGATATTGGCTTGTGGAATATTGCACAATTCACTAGAACTCTTGTAGCTGCCAAGTTGATAGATGATAAGGAGGCGAATTATGCAATGGAAAGATATGGAACCAAATTCATGGATGACTATCAAGCTATAATGACCAAAAAACTTGGTCTCCCCAAGTACATTAAACAGCTGATCAGTAAACTTCTGAATAACATGGCTATCGACAAAGTGGATTACACAAACTTTTTTCGGTTGCTATCCAATATCAAAGCTGATCCTAACATTCCCGAAGAGGAGTTGTTGAACCCACTAAAAGCTGTGCTATTAGATATTGGGCAGGAGCGAAAGGAGGCATGGATCAGCTGGGTGAAAATCTACATAGAGGAGCTGGCCTCTAGCGGCATCTCAGATGAGGAGAGGAAGGCATCAATGAATGCGGTGAACCCTAAATATGTTCTTAGAAACTACTTGTGCCAGAGTGCCATCGATGCAGCTGAACAAGGTGATTTTGAGGAGGTTCGGAGGGTGCTTAAAGTAATGGAACGACCATATGATGAGCAACCGGGAATGGAGAAATACGCTCGCTTGCCCCCTGCGTGGGCTTATAGACCTGGATTAAAACAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UPF0061

Protein Analysis

653

Amino Acids

73.24

Weight (kDa)

5.77

Isoelectric Point (pI)

46.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SelO PF02696 146 - 621 7.1e-124 Protein adenylyltransferase SelO
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 243
AccII CGCG 2 cut(s) 236, 877
AciI CCGC 9 cut(s) 81, 94, 184, 218, 231, 234, 661, 1728, 1766
AclWI GGATC 8 cut(s) 392, 521, 534, 598, 1280, 1320, 1598, 1694
AcoI YGGCCR 2 cut(s) 181, 279
AcsI RAATTY 7 cut(s) 110, 141, 536, 791, 825, 866, 1454
AcuI CTGAAG 2 cut(s) 486, 698
AcyI GRCGYC 1 cut(s) 575
AdeI CACNNNGTG 1 cut(s) 1210
AfaI GTAC 3 cut(s) 1012, 1162, 1508
AfiI CCNNNNNNNGG 5 cut(s) 223, 587, 1355, 1926, 1927
AflIII ACRYGT 2 cut(s) 875, 882
AgsI TTSAA 6 cut(s) 346, 542, 1001, 1087, 1216, 1633
AjnI CCWGG 4 cut(s) 146, 391, 1318, 1939
AjuI GAANNNNNNNTTGG 2 cut(s) 260, 292
Alw21I GWGCWC 1 cut(s) 844
Alw26I GTCTC 2 cut(s) 582, 1502
AlwI GGATC 8 cut(s) 392, 521, 534, 598, 1280, 1320, 1598, 1694
Ama87I CYCGRG 1 cut(s) 837
AoxI GGCC 6 cut(s) 181, 225, 279, 545, 760, 1719
ApeKI GCWGC 6 cut(s) 151, 168, 186, 1133, 1397, 1820
ApoI RAATTY 7 cut(s) 110, 141, 536, 791, 825, 866, 1454
ArsI GACNNNNNNTTYG 2 cut(s) 244, 276
Asp700I GAANNNNTTC 3 cut(s) 810, 1005, 1104
AspS9I GGNCC 2 cut(s) 994, 1259
AsuC2I CCSGG 4 cut(s) 403, 788, 915, 1893
AsuHPI GGTGA 4 cut(s) 204, 1708, 1780, 1844
AvaI CYCGRG 1 cut(s) 837
AvaII GGWCC 2 cut(s) 994, 1259
BamHI GGATCC 1 cut(s) 526
BanII GRGCYC 2 cut(s) 844, 915
BarI GAAGNNNNNNTAC 2 cut(s) 725, 757
BauI CACGAG 1 cut(s) 420
BbsI GAAGAC 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 844
BbvCI CCTCAGC 2 cut(s) 173, 480
BbvI GCAGC 6 cut(s) 138, 180, 198, 1145, 1384, 1832
BccI CCATC 7 cut(s) 650, 699, 752, 887, 949, 1176, 1820
BceAI ACGGC 1 cut(s) 81
BciT130I CCWGG 4 cut(s) 148, 393, 1320, 1941
BclI TGATCA 1 cut(s) 1521
BcnI CCSGG 4 cut(s) 403, 788, 915, 1893
BcoDI GTCTC 2 cut(s) 582, 1502
BfaI CTAG 3 cut(s) 981, 1383, 1725
BfmI CTRYAG 1 cut(s) 799
BglII AGATCT 1 cut(s) 355
BisI GCNGC 9 cut(s) 152, 169, 184, 187, 234, 1134, 1398, 1729, 1821
BlpI GCTNAGC 1 cut(s) 1155
BlsI GCNGC 9 cut(s) 153, 170, 185, 188, 235, 1135, 1399, 1730, 1822
Bme1390I CCNGG 8 cut(s) 148, 393, 403, 788, 915, 1320, 1893, 1941
Bme18I GGWCC 2 cut(s) 994, 1259
BmeT110I CYCGRG 1 cut(s) 837
BmgT120I GGNCC 2 cut(s) 994, 1259
BmiI GGNNCC 3 cut(s) 528, 912, 1450
BmrFI CCNGG 8 cut(s) 148, 393, 403, 788, 915, 1320, 1893, 1941
BmsI GCATC 6 cut(s) 792, 1045, 1267, 1740, 1763, 1807
BpiI GAAGAC 1 cut(s) 740
BplI GAGNNNNNCTC 2 cut(s) 1706, 1738
Bpu10I CCTNAGC 2 cut(s) 173, 480
Bpu1102I GCTNAGC 1 cut(s) 1155
BpuMI CCSGG 4 cut(s) 403, 788, 915, 1893
Bsa29I ATCGAT 1 cut(s) 1815
BsaBI GATNNNNATC 3 cut(s) 525, 897, 1467
BsaHI GRCGYC 1 cut(s) 575
BsaI GGTCTC 1 cut(s) 1502
BsaJI CCNNGG 6 cut(s) 146, 204, 401, 1170, 1308, 1319
BsaXI ACNNNNNCTCC 6 cut(s) 42, 72, 1318, 1348, 1482, 1512
Bsc4I CCNNNNNNNGG 5 cut(s) 223, 587, 1355, 1926, 1927
Bse118I RCCGGY 1 cut(s) 281
Bse3DI GCAATG 3 cut(s) 319, 1102, 1440
Bse8I GATNNNNATC 3 cut(s) 525, 897, 1467
BseBI CCWGG 4 cut(s) 148, 393, 1320, 1941
BseCI ATCGAT 1 cut(s) 1815
BseDI CCNNGG 6 cut(s) 146, 204, 401, 1170, 1308, 1319
BseGI GGATG 3 cut(s) 783, 1282, 1468
BseJI GATNNNNATC 3 cut(s) 525, 897, 1467
BseLI CCNNNNNNNGG 5 cut(s) 223, 587, 1355, 1926, 1927
BseMI GCAATG 3 cut(s) 319, 1102, 1440
BseMII CTCAG 6 cut(s) 187, 344, 494, 690, 1146, 1749
BseX3I CGGCCG 1 cut(s) 181
BseXI GCAGC 6 cut(s) 138, 180, 198, 1145, 1384, 1832
BseYI CCCAGC 3 cut(s) 641, 728, 1692
Bsh1236I CGCG 2 cut(s) 236, 877
Bsh1285I CGRYCG 2 cut(s) 184, 243
BshFI GGCC 6 cut(s) 183, 227, 281, 547, 762, 1721
BshVI ATCGAT 1 cut(s) 1815
BsiEI CGRYCG 2 cut(s) 184, 243
BsiHKAI GWGCWC 1 cut(s) 844
BsiHKCI CYCGRG 1 cut(s) 837
BsiSI CCGG 7 cut(s) 180, 221, 282, 403, 787, 915, 1892
BslFI GGGAC 2 cut(s) 380, 439
BslI CCNNNNNNNGG 5 cut(s) 223, 587, 1355, 1926, 1927
BsmAI GTCTC 2 cut(s) 582, 1502
BsmBI CGTCTC 1 cut(s) 582
BsmFI GGGAC 2 cut(s) 380, 439
BsmI GAATGC 1 cut(s) 1768
BsnI GGCC 6 cut(s) 183, 227, 281, 547, 762, 1721
Bso31I GGTCTC 1 cut(s) 1502
BsoBI CYCGRG 1 cut(s) 837
Bsp1286I GDGCHC 2 cut(s) 844, 915
Bsp1720I GCTNAGC 1 cut(s) 1155
Bsp19I CCATGG 1 cut(s) 204
BspACI CCGC 9 cut(s) 81, 94, 184, 218, 231, 234, 661, 1728, 1766
BspANI GGCC 6 cut(s) 183, 227, 281, 547, 762, 1721
BspCNI CTCAG 6 cut(s) 186, 343, 493, 691, 1147, 1748
BspDI ATCGAT 1 cut(s) 1815
BspFNI CGCG 2 cut(s) 236, 877
BspLI GGNNCC 3 cut(s) 528, 912, 1450
BspMAI CTGCAG 1 cut(s) 803
BspPI GGATC 8 cut(s) 392, 521, 534, 598, 1280, 1320, 1598, 1694
BspTNI GGTCTC 1 cut(s) 1502
BsrDI GCAATG 3 cut(s) 319, 1102, 1440
BsrFI RCCGGY 1 cut(s) 281
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 6 cut(s) 146, 204, 401, 1170, 1308, 1319
BssNI GRCGYC 1 cut(s) 575
BssSI CACGAG 1 cut(s) 420
BssT1I CCWWGG 2 cut(s) 204, 1170
Bst2BI CACGAG 1 cut(s) 420
Bst2UI CCWGG 4 cut(s) 148, 393, 1320, 1941
Bst4CI ACNGT 2 cut(s) 746, 1208
Bst6I CTCTTC 1 cut(s) 1614
BstACI GRCGYC 1 cut(s) 575
BstAPI GCANNNNNTGC 2 cut(s) 262, 1025
BstC8I GCNNGC 8 cut(s) 166, 198, 283, 435, 663, 1719, 1912, 1916
BstDEI CTNAG 8 cut(s) 173, 330, 480, 693, 699, 1155, 1735, 1787
BstDSI CCRYGG 2 cut(s) 204, 1308
BstF5I GGATG 3 cut(s) 783, 1282, 1468
BstFNI CGCG 2 cut(s) 236, 877
BstMAI GTCTC 2 cut(s) 582, 1502
BstMCI CGRYCG 2 cut(s) 184, 243
BstMWI GCNNNNNNNGC 8 cut(s) 174, 183, 233, 262, 282, 1025, 1430, 1817
BstNI CCWGG 4 cut(s) 148, 393, 1320, 1941
BstNSI RCATGY 4 cut(s) 168, 437, 637, 886
BstSCI CCNGG 8 cut(s) 146, 391, 401, 786, 913, 1318, 1891, 1939
BstSFI CTRYAG 1 cut(s) 799
BstUI CGCG 2 cut(s) 236, 877
BstV1I GCAGC 6 cut(s) 138, 180, 198, 1145, 1384, 1832
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 3 cut(s) 355, 526, 1312
BstXI CCANNNNNNTGG 1 cut(s) 1459
BstYI RGATCY 3 cut(s) 355, 526, 1312
BstZI CGGCCG 1 cut(s) 181
Bsu15I ATCGAT 1 cut(s) 1815
BsuRI GGCC 6 cut(s) 183, 227, 281, 547, 762, 1721
BsuTUI ATCGAT 1 cut(s) 1815
BtgI CCRYGG 2 cut(s) 204, 1308
BtgZI GCGATG 1 cut(s) 300
BtsCI GGATG 3 cut(s) 783, 1282, 1468
BtsI GCAGTG 1 cut(s) 808
BtsIMutI CAGTG 2 cut(s) 808, 1218
Cac8I GCNNGC 8 cut(s) 166, 198, 283, 435, 663, 1719, 1912, 1916
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 2 cut(s) 994, 1259
ClaI ATCGAT 1 cut(s) 1815
CseI GACGC 3 cut(s) 225, 262, 564
Csp6I GTAC 3 cut(s) 1011, 1161, 1507
CviQI GTAC 3 cut(s) 1011, 1161, 1507
DdeI CTNAG 8 cut(s) 173, 330, 480, 693, 699, 1155, 1735, 1787
DraIII CACNNNGTG 1 cut(s) 1210
EaeI YGGCCR 2 cut(s) 181, 279
EagI CGGCCG 1 cut(s) 181
Eam1104I CTCTTC 1 cut(s) 1614
EarI CTCTTC 1 cut(s) 1614
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 842
EclXI CGGCCG 1 cut(s) 181
Eco130I CCWWGG 2 cut(s) 204, 1170
Eco24I GRGCYC 2 cut(s) 844, 915
Eco31I GGTCTC 1 cut(s) 1502
Eco47I GGWCC 2 cut(s) 994, 1259
Eco52I CGGCCG 1 cut(s) 181
Eco53kI GAGCTC 1 cut(s) 842
Eco57I CTGAAG 2 cut(s) 486, 698
Eco88I CYCGRG 1 cut(s) 837
EcoICRI GAGCTC 1 cut(s) 842
EcoO109I RGGNCCY 1 cut(s) 994
EcoRI GAATTC 3 cut(s) 141, 791, 825
EcoRII CCWGG 4 cut(s) 146, 391, 1318, 1939
EcoT14I CCWWGG 2 cut(s) 204, 1170
EcoT22I ATGCAT 1 cut(s) 1282
EcoT38I GRGCYC 2 cut(s) 844, 915
ErhI CCWWGG 2 cut(s) 204, 1170
Esp3I CGTCTC 1 cut(s) 582
FalI AAGNNNNNCTT 4 cut(s) 981, 1013, 1092, 1124
FaqI GGGAC 2 cut(s) 380, 439
FauI CCCGC 2 cut(s) 225, 654
FauNDI CATATG 1 cut(s) 1879
FbaI TGATCA 1 cut(s) 1521
FblI GTMKAC 1 cut(s) 243
Fnu4HI GCNGC 9 cut(s) 152, 169, 184, 187, 234, 1134, 1398, 1729, 1821
FokI GGATG 3 cut(s) 770, 1289, 1475
FriOI GRGCYC 2 cut(s) 844, 915
Fsp4HI GCNGC 9 cut(s) 152, 169, 184, 187, 234, 1134, 1398, 1729, 1821
FspBI CTAG 3 cut(s) 981, 1383, 1725
GluI GCNGC 9 cut(s) 152, 169, 184, 187, 234, 1134, 1398, 1729, 1821
GsaI CCCAGC 3 cut(s) 645, 732, 1696
HaeIII GGCC 6 cut(s) 183, 227, 281, 547, 762, 1721
HapII CCGG 7 cut(s) 180, 221, 282, 403, 787, 915, 1892
HgaI GACGC 3 cut(s) 225, 262, 564
Hin1I GRCGYC 1 cut(s) 575
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 7 cut(s) 209, 245, 268, 295, 415, 500, 736
HpaII CCGG 7 cut(s) 180, 221, 282, 403, 787, 915, 1892
HphI GGTGA 4 cut(s) 204, 1708, 1780, 1844
Hpy166II GTNNAC 4 cut(s) 244, 620, 1529, 1771
Hpy188I TCNGA 8 cut(s) 273, 333, 499, 700, 1116, 1536, 1738, 1851
Hpy188III TCNNGA 4 cut(s) 518, 1109, 1274, 1616
Hpy8I GTNNAC 4 cut(s) 244, 620, 1529, 1771
Hpy99I CGWCG 2 cut(s) 102, 241
HpyAV CCTTC 2 cut(s) 114, 1744
HpyCH4III ACNGT 2 cut(s) 746, 1208
HpyF10VI GCNNNNNNNGC 8 cut(s) 174, 183, 233, 262, 282, 1025, 1430, 1817
HpyF3I CTNAG 8 cut(s) 173, 330, 480, 693, 699, 1155, 1735, 1787
Hsp92I GRCGYC 1 cut(s) 575
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 1521
LmnI GCTCC 5 cut(s) 182, 205, 910, 1669, 1714
Lsp1109I GCAGC 6 cut(s) 138, 180, 198, 1145, 1384, 1832
LweI GCATC 6 cut(s) 792, 1045, 1267, 1740, 1763, 1807
MaeI CTAG 3 cut(s) 981, 1383, 1725
MaeIII GTNAC 6 cut(s) 250, 323, 853, 871, 878, 1292
MboII GAAGA 6 cut(s) 304, 365, 745, 1112, 1307, 1631
MfeI CAATTG 1 cut(s) 921
MflI RGATCY 3 cut(s) 355, 526, 1312
MhlI GDGCHC 2 cut(s) 844, 915
MluI ACGCGT 1 cut(s) 875
MlyI GAGTC 3 cut(s) 203, 239, 730
MmeI TCCRAC 2 cut(s) 153, 854
Mph1103I ATGCAT 1 cut(s) 1282
MroNI GCCGGC 1 cut(s) 281
MroXI GAANNNNTTC 3 cut(s) 810, 1005, 1104
MseI TTAA 5 cut(s) 687, 720, 1512, 1860, 1946
MspA1I CMGCKG 4 cut(s) 464, 1519, 1692, 1823
MspI CCGG 7 cut(s) 180, 221, 282, 403, 787, 915, 1892
MspR9I CCNGG 8 cut(s) 148, 393, 403, 788, 915, 1320, 1893, 1941
MunI CAATTG 1 cut(s) 921
Mva1269I GAATGC 1 cut(s) 1768
MvaI CCWGG 4 cut(s) 148, 393, 1320, 1941
MvnI CGCG 2 cut(s) 236, 877
MwoI GCNNNNNNNGC 8 cut(s) 174, 183, 233, 262, 282, 1025, 1430, 1817
NaeI GCCGGC 1 cut(s) 283
NciI CCSGG 4 cut(s) 403, 788, 915, 1893
NcoI CCATGG 1 cut(s) 204
NdeI CATATG 1 cut(s) 1879
NgoMIV GCCGGC 1 cut(s) 281
NlaIV GGNNCC 3 cut(s) 528, 912, 1450
NmeAIII GCCGAG 1 cut(s) 535
NmuCI GTSAC 4 cut(s) 250, 853, 871, 878
NsiI ATGCAT 1 cut(s) 1282
NspI RCATGY 4 cut(s) 168, 437, 637, 886
PaeI GCATGC 2 cut(s) 168, 437
PaeR7I CTCGAG 1 cut(s) 837
PciI ACATGT 1 cut(s) 882
PctI GAATGC 1 cut(s) 1768
PdiI GCCGGC 1 cut(s) 283
PdmI GAANNNNTTC 3 cut(s) 810, 1005, 1104
PfeI GAWTC 4 cut(s) 268, 295, 415, 500
PfoI TCCNGGA 1 cut(s) 786
PkrI GCNGC 9 cut(s) 153, 170, 185, 188, 235, 1135, 1399, 1730, 1822
PleI GAGTC 3 cut(s) 203, 239, 730
PpsI GAGTC 3 cut(s) 203, 239, 730
PpuMI RGGWCCY 1 cut(s) 994
PscI ACATGT 1 cut(s) 882
Psp124BI GAGCTC 1 cut(s) 844
Psp5II RGGWCCY 1 cut(s) 994
Psp6I CCWGG 4 cut(s) 146, 391, 1318, 1939
PspFI CCCAGC 3 cut(s) 641, 728, 1692
PspGI CCWGG 4 cut(s) 146, 391, 1318, 1939
PspN4I GGNNCC 3 cut(s) 528, 912, 1450
PspPI GGNCC 2 cut(s) 994, 1259
PspPPI RGGWCCY 1 cut(s) 994
PspXI VCTCGAGB 1 cut(s) 837
PstI CTGCAG 1 cut(s) 803
PsuI RGATCY 3 cut(s) 355, 526, 1312
PvuII CAGCTG 4 cut(s) 464, 1519, 1692, 1823
RsaI GTAC 3 cut(s) 1012, 1162, 1508
RsaNI GTAC 3 cut(s) 1011, 1161, 1507
SacI GAGCTC 1 cut(s) 844
SalI GTCGAC 1 cut(s) 242
SaqAI TTAA 5 cut(s) 687, 720, 1512, 1860, 1946
SatI GCNGC 9 cut(s) 152, 169, 184, 187, 234, 1134, 1398, 1729, 1821
Sau96I GGNCC 2 cut(s) 994, 1259
SchI GAGTC 3 cut(s) 203, 239, 730
ScrFI CCNGG 8 cut(s) 148, 393, 403, 788, 915, 1320, 1893, 1941
SduI GDGCHC 2 cut(s) 844, 915
SfaNI GCATC 6 cut(s) 792, 1045, 1267, 1740, 1763, 1807
SfcI CTRYAG 1 cut(s) 799
Sfr274I CTCGAG 1 cut(s) 837
SinI GGWCC 2 cut(s) 994, 1259
SlaI CTCGAG 1 cut(s) 837
SmlI CTYRAG 1 cut(s) 837
SmoI CTYRAG 1 cut(s) 837
SphI GCATGC 2 cut(s) 168, 437
SsiI CCGC 9 cut(s) 81, 94, 184, 218, 231, 234, 661, 1728, 1766
SspI AATATT 1 cut(s) 1369
SspMI CTAG 3 cut(s) 981, 1383, 1725
SstI GAGCTC 1 cut(s) 844
StyD4I CCNGG 8 cut(s) 146, 391, 401, 786, 913, 1318, 1891, 1939
StyI CCWWGG 2 cut(s) 204, 1170
TaaI ACNGT 2 cut(s) 746, 1208
TaqI TCGA 6 cut(s) 243, 351, 471, 838, 1551, 1815
TaqII GACCGA 1 cut(s) 229
TatI WGTACW 1 cut(s) 1506
TauI GCSGC 3 cut(s) 186, 236, 1731
TfiI GAWTC 4 cut(s) 268, 295, 415, 500
Tru1I TTAA 5 cut(s) 687, 720, 1512, 1860, 1946
Tru9I TTAA 5 cut(s) 687, 720, 1512, 1860, 1946
TscAI CASTG 2 cut(s) 808, 1225
TseFI GTSAC 4 cut(s) 250, 853, 871, 878
TseI GCWGC 6 cut(s) 151, 168, 186, 1133, 1397, 1820
Tsp45I GTSAC 4 cut(s) 250, 853, 871, 878
TspDTI ATGAA 4 cut(s) 803, 1113, 1447, 1775
TspGWI ACGGA 2 cut(s) 238, 1325
TspRI CASTG 2 cut(s) 808, 1225
VpaK11BI GGWCC 2 cut(s) 994, 1259
XapI RAATTY 7 cut(s) 110, 141, 536, 791, 825, 866, 1454
XceI RCATGY 4 cut(s) 168, 437, 637, 886
XhoI CTCGAG 1 cut(s) 837
XmiI GTMKAC 1 cut(s) 243
XmnI GAANNNNTTC 3 cut(s) 810, 1005, 1104
XspI CTAG 3 cut(s) 981, 1383, 1725
Zsp2I ATGCAT 1 cut(s) 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.