Rroxscaffold_1G00003610

Selenoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0009575
Physical Location & Seq
Forward (+)
4462318 .. 4467688
5371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00003610.1

Sequence Viewer

Length: 2187 bp
ATGCAAATCCTTTCGCATTTCTCTTCCAAAGCCTCCTTACCTTCGTCTCTCCTTCCCTCTCTCACCTCCGCCCTCATCTTCCGCCGTCGCCCCCCGAATTTCCCCTTTTACCCCTCCACCCCCTTCAAATTTCCCACCCTCGCATGCCACCTCAGCTCCGCCGGCCATAGCCCGCAACAAGCAGCAGCTCCCATGGACTCGCCGCCGCCACCCACAGAGGCCTCCGTCGACGCCGTCACGCGCGATTTGCGCAACCAGAGCTTGGCCGCCGACGGTGGGAATAACGCGCCGAGAGCGCGGTTGAAGCTTGAAGATCTGAACTGGGATAACTCGTTTGTTAGAGAGTTGCCTGGTGATCCCAGGACCGATACGTTTCCGCGAGAGAGAAATGGCGAAGATAGTTACCGGTTTCGTGTTGTTAGTGGAGTATGGTCTAATTTAGCTCTTGAGCTACAGATTGAGTTTTTACTAAGCGTTGGGGGCTTATGGTTTTCAACAAAGATAGAAAATTTGTTAATAGAACATGTCAACTGTGAAAACTTTACTGCATTAATCGAGAAGTGGCTAAGTCAGGATGGAACATTGAGTTTTAGTGATTCTGATTCTGATACCATCTTCTTTGATGAGCTACAGGTGGTGTTGCGTGCCTGTTTTACAAAAGTAACCCCGTCAGCTCAAGTTGATGATCCACAGCTCGTTGCTTGGTCAGAGTTGGTTGCTGAGTTGTTTGAATTGGATCCTCAAGAATTTGAAAGGCCAGATTTCCCCCTTTTATTCTCTGGAGCGTCTCCTTTAGTCGGATCGTCACCCTATGCTCAGTGCTATGGAGGACATCAGTTCGGCATGTGGGCGGGACAGTTGGGAGATGGTCGGGCTATTACACTCGGGGAGGTTCTTAACTCTAAATCTGAAAGGTGGGAACTGCAGCTTAAAGGTGCTGGAAAGACCCCTTACAGCCGGTTTGCGGATGGCCTTGCTGTGCTTCGTAGTAGCATTCGGGAATTCCTCTGCAGTGAAGCAATGCATAGTCTTGGAATTCCAACAACTCGTGCTCTATGTCTTGTGACAACAGGAAAACTTGTCACCCGTGACATGTTTTATGATGGCAATCCAAAGGAGGAGCCAGGTGCAATTGTTTGCAGGGTTGCTCCATCCTTCCTGCGCTTTGGATCCTACCAAATACACGCCTCTAGGGAAAATGAGGACCTTGCCATTGTTCGTACTCTAGCAGACTATACCATTAGGCATCACTTCCCCCATATAGAGAACATGAGTAAAAGTGAGAGTTTGTCTTTTAGTACAGGCAACGAAGAACATTCAGTCGTTGATCTAACGTCTAATAAGTATGCAGCCTGGGTAGTGGAGGTTGCTGAACGTACTGCATCCTTGGTTGCCAAATGGCAGGGGGTTGGTTTTACTCATGGTGTGTTGAACACTGACAATATGAGTATTTTGGGCCTCACCATTGATTATGGTCCTTTTGGATTTCTGGATGCATTCGATCCAAGTTACACTCCGAATACAACTGATCTTCCTGGGAGGAGATATTGTTTTGCAAATCAACCTGATATTGGCTTATGGAATATTATGCAATTAACCAGAACCTTGTCATCTGCCAAGTTGATAAATGAGAAGGAGGCAAACTATGCAATGGAAAGATATGGAACTAGATTCATGGATGATTATCAAGCTATAATGACAAAAAAGCTTGGTCTCCCCAAGTATGTCAAACAGTTGATCAGTAAACTTCTTAATAATATGGCTGTTGACAAAGTGGATTACACAAACTTTTTCCGGTTGCTTTCCAATATCAAAGCTGATCCCAGCATCCCAGATGAGGAGTTGTTAAACCCACTAAAGGCTGTTTTATTAGATATTGGCCAGGAGCGGAAGGAGGCATGGATCAGCTGGGTGAGAATCTACATAGAGGAGCTATCTGCGAGTGGCATCCCAGATGAGGAGAGGAAGGCCTCAATGAATGCGGTGAACCCTAAATATGTTCTTAGAAACTACTTATGCCAGAGTGCTATTGATGCAGCTGAACAAGGTGATTTTGGAGAGGTTCGAAGGGTGCTTAAAGTAATGGAACGACCATTTGATGAGCAACCAGGAATGGAAAAATATGCTCGCTTGCCCCCAGCCTGGGCTTATCGGCCTGGAGTTTGCATGCTTTCTTGCTCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UPF0061

Protein Analysis

728

Amino Acids

81.46

Weight (kDa)

5.3

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SelO PF02696 214 - 693 2.6e-123 Protein adenylyltransferase SelO
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 251
AccB7I CCANNNNNTGG 1 cut(s) 262
AccBSI CCGCTC 1 cut(s) 1888
AccI GTMKAC 1 cut(s) 228
AccII CGCG 5 cut(s) 241, 243, 287, 298, 379
AcoI YGGCCR 3 cut(s) 163, 264, 1879
AcsI RAATTY 6 cut(s) 97, 128, 508, 746, 1001, 1035
AcyI GRCGYC 1 cut(s) 231
AfaI GTAC 3 cut(s) 1222, 1300, 1378
AflIII ACRYGT 2 cut(s) 523, 1092
AgeI ACCGGT 1 cut(s) 405
AgsI TTSAA 7 cut(s) 127, 304, 311, 495, 731, 752, 1432
AjnI CCWGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
Alw21I GWGCWC 1 cut(s) 1054
Alw26I GTCTC 3 cut(s) 51, 792, 1718
Ama87I CYCGRG 1 cut(s) 884
AoxI GGCC 9 cut(s) 163, 219, 264, 755, 970, 1456, 1879, 1968, 2153
ApeKI GCWGC 5 cut(s) 182, 185, 925, 1349, 2036
ApoI RAATTY 6 cut(s) 97, 128, 508, 746, 1001, 1035
AseI ATTAAT 1 cut(s) 551
AsiGI ACCGGT 1 cut(s) 405
AspLEI GCGC 5 cut(s) 243, 252, 289, 298, 1164
AspS9I GGNCC 4 cut(s) 363, 1204, 1456, 1475
AsuHPI GGTGA 8 cut(s) 55, 365, 798, 1075, 1453, 1924, 1996, 2060
AsuII TTCGAA 1 cut(s) 2065
AvaI CYCGRG 1 cut(s) 884
AvaII GGWCC 3 cut(s) 363, 1204, 1475
BalI TGGCCA 1 cut(s) 1881
BamHI GGATCC 2 cut(s) 736, 1169
BauI CACGAG 1 cut(s) 1047
Bbv12I GWGCWC 1 cut(s) 1054
BbvCI CCTCAGC 1 cut(s) 152
BbvI GCAGC 5 cut(s) 194, 197, 937, 1361, 2048
BccI CCATC 6 cut(s) 569, 620, 860, 962, 1097, 1159
BceAI ACGGC 2 cut(s) 69, 218
BciT130I CCWGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
BclI TGATCA 1 cut(s) 1737
BcoDI GTCTC 3 cut(s) 51, 792, 1718
BfaI CTAG 3 cut(s) 1191, 1226, 1668
BfmI CTRYAG 4 cut(s) 452, 629, 923, 1009
BglII AGATCT 1 cut(s) 313
BisI GCNGC 8 cut(s) 183, 186, 203, 206, 267, 926, 1350, 2037
BlsI GCNGC 8 cut(s) 184, 187, 204, 207, 268, 927, 1351, 2038
Bme1390I CCNGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
Bme18I GGWCC 3 cut(s) 363, 1204, 1475
BmeT110I CYCGRG 1 cut(s) 884
BmgT120I GGNCC 4 cut(s) 363, 1204, 1456, 1475
BmiI GGNNCC 3 cut(s) 738, 1122, 1171
BmrFI CCNGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
BmrI ACTGGG 1 cut(s) 331
BmsI GCATC 6 cut(s) 1255, 1391, 1483, 1836, 1956, 2023
BmuI ACTGGG 1 cut(s) 331
BpmI CTGGAG 2 cut(s) 801, 2178
Bpu10I CCTNAGC 1 cut(s) 152
Bpu14I TTCGAA 1 cut(s) 2065
BpuEI CTTGAG 3 cut(s) 467, 660, 726
BsaBI GATNNNNATC 2 cut(s) 1107, 1683
BsaHI GRCGYC 1 cut(s) 231
BsaI GGTCTC 1 cut(s) 1718
BsaJI CCNNGG 6 cut(s) 192, 359, 1353, 1386, 1535, 2142
BsaWI WCCGGW 2 cut(s) 405, 1794
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 1534, 1564
Bse118I RCCGGY 3 cut(s) 161, 405, 957
Bse1I ACTGG 1 cut(s) 326
Bse3DI GCAATG 2 cut(s) 1026, 1656
Bse8I GATNNNNATC 2 cut(s) 1107, 1683
BseBI CCWGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
BseDI CCNNGG 6 cut(s) 192, 359, 1353, 1386, 1535, 2142
BseGI GGATG 8 cut(s) 580, 973, 1151, 1382, 1498, 1684, 1827, 1947
BseJI GATNNNNATC 2 cut(s) 1107, 1683
BseMI GCAATG 2 cut(s) 1026, 1656
BseMII CTCAG 3 cut(s) 166, 711, 830
BseNI ACTGG 1 cut(s) 326
BseRI GAGGAG 5 cut(s) 1133, 1555, 1853, 1943, 1973
BseXI GCAGC 5 cut(s) 194, 197, 937, 1361, 2048
BseYI CCCAGC 3 cut(s) 1823, 1908, 2137
Bsh1236I CGCG 5 cut(s) 241, 243, 287, 298, 379
BshFI GGCC 9 cut(s) 165, 221, 266, 757, 972, 1458, 1881, 1970, 2155
BshTI ACCGGT 1 cut(s) 405
BsiHKAI GWGCWC 1 cut(s) 1054
BsiHKCI CYCGRG 1 cut(s) 884
BsiSI CCGG 4 cut(s) 162, 406, 958, 1795
BslFI GGGAC 1 cut(s) 867
BsmAI GTCTC 3 cut(s) 51, 792, 1718
BsmBI CGTCTC 2 cut(s) 51, 792
BsmFI GGGAC 1 cut(s) 867
BsmI GAATGC 3 cut(s) 993, 1496, 1984
BsnI GGCC 9 cut(s) 165, 221, 266, 757, 972, 1458, 1881, 1970, 2155
Bso31I GGTCTC 1 cut(s) 1718
BsoBI CYCGRG 1 cut(s) 884
Bsp119I TTCGAA 1 cut(s) 2065
Bsp1286I GDGCHC 1 cut(s) 1054
Bsp19I CCATGG 1 cut(s) 192
BspANI GGCC 9 cut(s) 165, 221, 266, 757, 972, 1458, 1881, 1970, 2155
BspCNI CTCAG 3 cut(s) 165, 712, 829
BspFNI CGCG 5 cut(s) 241, 243, 287, 298, 379
BspHI TCATGA 1 cut(s) 2183
BspLI GGNNCC 3 cut(s) 738, 1122, 1171
BspMAI CTGCAG 2 cut(s) 927, 1013
BspT104I TTCGAA 1 cut(s) 2065
BspTNI GGTCTC 1 cut(s) 1718
BsrBI CCGCTC 1 cut(s) 1888
BsrDI GCAATG 2 cut(s) 1026, 1656
BsrFI RCCGGY 3 cut(s) 161, 405, 957
BsrI ACTGG 1 cut(s) 326
BssAI RCCGGY 3 cut(s) 161, 405, 957
BssECI CCNNGG 6 cut(s) 192, 359, 1353, 1386, 1535, 2142
BssNI GRCGYC 1 cut(s) 231
BssSI CACGAG 1 cut(s) 1047
BssT1I CCWWGG 2 cut(s) 192, 1386
Bst2BI CACGAG 1 cut(s) 1047
Bst2UI CCWGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
Bst4CI ACNGT 4 cut(s) 275, 533, 858, 1734
Bst6I CTCTTC 1 cut(s) 28
BstACI GRCGYC 1 cut(s) 231
BstAPI GCANNNNNTGC 1 cut(s) 1646
BstBI TTCGAA 1 cut(s) 2065
BstC8I GCNNGC 7 cut(s) 145, 163, 173, 645, 2128, 2132, 2168
BstDEI CTNAG 6 cut(s) 152, 470, 566, 720, 816, 2003
BstDSI CCRYGG 1 cut(s) 192
BstF5I GGATG 8 cut(s) 580, 973, 1151, 1382, 1498, 1684, 1827, 1947
BstFNI CGCG 5 cut(s) 241, 243, 287, 298, 379
BstHHI GCGC 5 cut(s) 243, 252, 289, 298, 1164
BstMAI GTCTC 3 cut(s) 51, 792, 1718
BstNI CCWGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
BstNSI RCATGY 5 cut(s) 147, 527, 847, 1096, 2170
BstSCI CCNGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
BstSFI CTRYAG 4 cut(s) 452, 629, 923, 1009
BstUI CGCG 5 cut(s) 241, 243, 287, 298, 379
BstV1I GCAGC 5 cut(s) 194, 197, 937, 1361, 2048
BstX2I RGATCY 3 cut(s) 313, 736, 1169
BstYI RGATCY 3 cut(s) 313, 736, 1169
BsuRI GGCC 9 cut(s) 165, 221, 266, 757, 972, 1458, 1881, 1970, 2155
BtgI CCRYGG 1 cut(s) 192
BtsCI GGATG 8 cut(s) 580, 973, 1151, 1382, 1498, 1684, 1827, 1947
BtsI GCAGTG 1 cut(s) 1018
BtsIMutI CAGTG 3 cut(s) 824, 1018, 1434
Cac8I GCNNGC 7 cut(s) 145, 163, 173, 645, 2128, 2132, 2168
CciI TCATGA 1 cut(s) 2183
CfoI GCGC 5 cut(s) 243, 252, 289, 298, 1164
Cfr10I RCCGGY 3 cut(s) 161, 405, 957
Cfr13I GGNCC 4 cut(s) 363, 1204, 1456, 1475
CseI GACGC 2 cut(s) 239, 774
Csp6I GTAC 3 cut(s) 1221, 1299, 1377
CspAI ACCGGT 1 cut(s) 405
CviQI GTAC 3 cut(s) 1221, 1299, 1377
DdeI CTNAG 6 cut(s) 152, 470, 566, 720, 816, 2003
EaeI YGGCCR 3 cut(s) 163, 264, 1879
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
EciI GGCGGA 3 cut(s) 58, 71, 148
Eco130I CCWWGG 2 cut(s) 192, 1386
Eco147I AGGCCT 2 cut(s) 221, 1970
Eco31I GGTCTC 1 cut(s) 1718
Eco47I GGWCC 3 cut(s) 363, 1204, 1475
Eco88I CYCGRG 1 cut(s) 884
EcoO109I RGGNCCY 1 cut(s) 1204
EcoRI GAATTC 2 cut(s) 1001, 1035
EcoRII CCWGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
EcoT14I CCWWGG 2 cut(s) 192, 1386
EcoT22I ATGCAT 2 cut(s) 1026, 1498
ErhI CCWWGG 2 cut(s) 192, 1386
Esp3I CGTCTC 2 cut(s) 51, 792
FaqI GGGAC 1 cut(s) 867
FauI CCCGC 2 cut(s) 180, 844
FbaI TGATCA 1 cut(s) 1737
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 8 cut(s) 183, 186, 203, 206, 267, 926, 1350, 2037
FokI GGATG 8 cut(s) 587, 980, 1138, 1369, 1505, 1691, 1814, 1934
Fsp4HI GCNGC 8 cut(s) 183, 186, 203, 206, 267, 926, 1350, 2037
FspBI CTAG 3 cut(s) 1191, 1226, 1668
FspI TGCGCA 1 cut(s) 251
GlaI GCGC 5 cut(s) 242, 251, 288, 297, 1163
GluI GCNGC 8 cut(s) 183, 186, 203, 206, 267, 926, 1350, 2037
GsaI CCCAGC 3 cut(s) 1827, 1912, 2141
GsuI CTGGAG 2 cut(s) 801, 2178
HaeIII GGCC 9 cut(s) 165, 221, 266, 757, 972, 1458, 1881, 1970, 2155
HapII CCGG 4 cut(s) 162, 406, 958, 1795
HgaI GACGC 2 cut(s) 239, 774
HhaI GCGC 5 cut(s) 243, 252, 289, 298, 1164
Hin1I GRCGYC 1 cut(s) 231
Hin6I GCGC 5 cut(s) 241, 250, 287, 296, 1162
HinP1I GCGC 5 cut(s) 241, 250, 287, 296, 1162
HincII GTYRAC 3 cut(s) 229, 529, 1768
HindII GTYRAC 3 cut(s) 229, 529, 1768
HindIII AAGCTT 2 cut(s) 305, 1706
HinfI GANTC 5 cut(s) 197, 596, 602, 1671, 1917
HpaII CCGG 4 cut(s) 162, 406, 958, 1795
HphI GGTGA 8 cut(s) 55, 365, 798, 1075, 1453, 1924, 1996, 2060
Hpy166II GTNNAC 5 cut(s) 229, 529, 1745, 1768, 1987
Hpy188I TCNGA 7 cut(s) 318, 601, 607, 709, 800, 910, 1518
Hpy188III TCNNGA 8 cut(s) 446, 556, 572, 743, 780, 998, 1490, 2184
Hpy8I GTNNAC 5 cut(s) 229, 529, 1745, 1768, 1987
Hpy99I CGWCG 4 cut(s) 90, 230, 233, 275
HpyAV CCTTC 8 cut(s) 51, 62, 133, 1165, 1627, 1885, 1960, 2061
HpyCH4III ACNGT 4 cut(s) 275, 533, 858, 1734
HpyCH4IV ACGT 3 cut(s) 371, 1334, 1375
HpyF3I CTNAG 6 cut(s) 152, 470, 566, 720, 816, 2003
HpySE526I ACGT 3 cut(s) 371, 1334, 1375
Hsp92I GRCGYC 1 cut(s) 231
HspAI GCGC 5 cut(s) 241, 250, 287, 296, 1162
KroI GCCGGC 1 cut(s) 161
KroNI GCCGGC 1 cut(s) 163
Ksp22I TGATCA 1 cut(s) 1737
LmnI GCTCC 7 cut(s) 161, 193, 782, 1120, 1153, 1885, 1930
Lsp1109I GCAGC 5 cut(s) 194, 197, 937, 1361, 2048
LweI GCATC 6 cut(s) 1255, 1391, 1483, 1836, 1956, 2023
MaeI CTAG 3 cut(s) 1191, 1226, 1668
MaeII ACGT 3 cut(s) 371, 1334, 1375
MaeIII GTNAC 8 cut(s) 235, 401, 661, 804, 1063, 1081, 1088, 1508
MbiI CCGCTC 1 cut(s) 1888
MboII GAAGA 7 cut(s) 15, 70, 323, 407, 607, 1322, 1523
MfeI CAATTG 1 cut(s) 1131
MflI RGATCY 3 cut(s) 313, 736, 1169
MhlI GDGCHC 1 cut(s) 1054
MlsI TGGCCA 1 cut(s) 1881
MluNI TGGCCA 1 cut(s) 1881
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 2 cut(s) 778, 1064
Mox20I TGGCCA 1 cut(s) 1881
Mph1103I ATGCAT 2 cut(s) 1026, 1498
MroNI GCCGGC 1 cut(s) 161
MscI TGGCCA 1 cut(s) 1881
MseI TTAA 8 cut(s) 515, 551, 897, 930, 1595, 1752, 1847, 2076
Msp20I TGGCCA 1 cut(s) 1881
MspA1I CMGCKG 2 cut(s) 1908, 2039
MspI CCGG 4 cut(s) 162, 406, 958, 1795
MspR9I CCNGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
MunI CAATTG 1 cut(s) 1131
Mva1269I GAATGC 3 cut(s) 993, 1496, 1984
MvaI CCWGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
MvnI CGCG 5 cut(s) 241, 243, 287, 298, 379
NaeI GCCGGC 1 cut(s) 163
NcoI CCATGG 1 cut(s) 192
NgoMIV GCCGGC 1 cut(s) 161
NlaIV GGNNCC 3 cut(s) 738, 1122, 1171
NmeAIII GCCGAG 1 cut(s) 315
NmuCI GTSAC 5 cut(s) 235, 804, 1063, 1081, 1088
NsbI TGCGCA 1 cut(s) 251
NsiI ATGCAT 2 cut(s) 1026, 1498
NspI RCATGY 5 cut(s) 147, 527, 847, 1096, 2170
NspV TTCGAA 1 cut(s) 2065
PaeI GCATGC 2 cut(s) 147, 2170
PagI TCATGA 1 cut(s) 2183
PceI AGGCCT 2 cut(s) 221, 1970
PciI ACATGT 2 cut(s) 523, 1092
PctI GAATGC 3 cut(s) 993, 1496, 1984
PdiI GCCGGC 1 cut(s) 163
PfeI GAWTC 4 cut(s) 596, 602, 1671, 1917
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 262
PinAI ACCGGT 1 cut(s) 405
PkrI GCNGC 8 cut(s) 184, 187, 204, 207, 268, 927, 1351, 2038
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PpuMI RGGWCCY 1 cut(s) 1204
PscI ACATGT 2 cut(s) 523, 1092
PshBI ATTAAT 1 cut(s) 551
Psp5II RGGWCCY 1 cut(s) 1204
Psp6I CCWGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
PspFI CCCAGC 3 cut(s) 1823, 1908, 2137
PspGI CCWGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
PspN4I GGNNCC 3 cut(s) 738, 1122, 1171
PspPI GGNCC 4 cut(s) 363, 1204, 1456, 1475
PspPPI RGGWCCY 1 cut(s) 1204
PstI CTGCAG 2 cut(s) 927, 1013
PsuI RGATCY 3 cut(s) 313, 736, 1169
PsyI GACNNNGTC 1 cut(s) 233
PvuII CAGCTG 2 cut(s) 1908, 2039
RsaI GTAC 3 cut(s) 1222, 1300, 1378
RsaNI GTAC 3 cut(s) 1221, 1299, 1377
SalI GTCGAC 1 cut(s) 227
SaqAI TTAA 8 cut(s) 515, 551, 897, 930, 1595, 1752, 1847, 2076
SatI GCNGC 8 cut(s) 183, 186, 203, 206, 267, 926, 1350, 2037
Sau96I GGNCC 4 cut(s) 363, 1204, 1456, 1475
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 9 cut(s) 351, 361, 1125, 1354, 1536, 1883, 2109, 2143, 2157
SduI GDGCHC 1 cut(s) 1054
SfaNI GCATC 6 cut(s) 1255, 1391, 1483, 1836, 1956, 2023
SfcI CTRYAG 4 cut(s) 452, 629, 923, 1009
SfuI TTCGAA 1 cut(s) 2065
SgrDI CGTCGACG 1 cut(s) 227
SinI GGWCC 3 cut(s) 363, 1204, 1475
SmlI CTYRAG 3 cut(s) 446, 675, 741
SmoI CTYRAG 3 cut(s) 446, 675, 741
SphI GCATGC 2 cut(s) 147, 2170
SseBI AGGCCT 2 cut(s) 221, 1970
SspI AATATT 1 cut(s) 1585
SspMI CTAG 3 cut(s) 1191, 1226, 1668
StuI AGGCCT 2 cut(s) 221, 1970
StyD4I CCNGG 9 cut(s) 349, 359, 1123, 1352, 1534, 1881, 2107, 2141, 2155
StyI CCWWGG 2 cut(s) 192, 1386
TaaI ACNGT 4 cut(s) 275, 533, 858, 1734
TaiI ACGT 3 cut(s) 374, 1337, 1378
TaqI TCGA 4 cut(s) 228, 555, 1500, 2065
TaqII GACCGA 1 cut(s) 380
TatI WGTACW 1 cut(s) 1298
TauI GCSGC 3 cut(s) 205, 208, 269
TfiI GAWTC 4 cut(s) 596, 602, 1671, 1917
Tru1I TTAA 8 cut(s) 515, 551, 897, 930, 1595, 1752, 1847, 2076
Tru9I TTAA 8 cut(s) 515, 551, 897, 930, 1595, 1752, 1847, 2076
TscAI CASTG 3 cut(s) 824, 1018, 1441
TseFI GTSAC 5 cut(s) 235, 804, 1063, 1081, 1088
TseI GCWGC 5 cut(s) 182, 185, 925, 1349, 2036
Tsp45I GTSAC 5 cut(s) 235, 804, 1063, 1081, 1088
TspDTI ATGAA 2 cut(s) 1663, 1991
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 3 cut(s) 824, 1018, 1441
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 1 cut(s) 262
VpaK11BI GGWCC 3 cut(s) 363, 1204, 1475
VspI ATTAAT 1 cut(s) 551
XapI RAATTY 6 cut(s) 97, 128, 508, 746, 1001, 1035
XceI RCATGY 5 cut(s) 147, 527, 847, 1096, 2170
XmiI GTMKAC 1 cut(s) 228
XspI CTAG 3 cut(s) 1191, 1226, 1668
Zsp2I ATGCAT 2 cut(s) 1026, 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.