MD11G1093100.v1.1

phosphatase 2C

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0010786
Physical Location & Seq
Reverse (-)
7722006 .. 7724115
2110 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1093100.v1.1.491

Sequence Viewer

Length: 1218 bp
ATGGCGGAGATCTGGTACGGAGTAGTGAGTGAAAGCGACGCGTCGTCAAATCCCTGCGAGGCGAGTTCACGAGCAGCGAGACGGAGGAGGATGGAGATCCGACGTTGCAAATTCGTCTCCGGAGTGGCCCCACCGGCGCCGGAGTCACCGGACAATTCCGAGAAGCGGAAGAAAGCCGCATCACGTACGACGTCGTCGGCTTCTCGCGAGTTGGAAAACGCCCTGCAGTGCTCCGGTTCTTCCGACGAAGAGAAAATCCCCCCGAGTCAAAAGAAGTCAACGAAGTTCCGAGCGTCCTCGTCATCGAACGTCCCTGAAGCTTTGAGAGAGCTCCCGAAGTACGGACTGGCCTCCGTCTGCGGCCGCCGTAGAGATATGGAGGACGCTGTGTCTGTACACCCCTCGTTTTGCCGGCGCATCAGAGACGCCACCACTCAATTGCATTATTTCGGTGTCTACGACGGCCACGGTTGCTCCCACGTGGCGACGAAATGCAGAGAGCGGATGCATGAGCTGGTGAAGGAGGAAGTGGAGAACATGGAGGAATGGAAGACGGCGATGGAGCGGAGCTTCGTGCGGATGGACAAGGAGGTGGTGGCGTGGAGCCGCGAAGGCGGCGTCGGAGTGAGCAATTGCCGTTGCGAGCTTCAAACTCCGGAGTCCGAGGCTGTCGGATCCACCGCCGTCGTAGCAGTCGTCTCTCCCGATAAGATCGTCGTGGCCAATTGCGGCGACTCGAGAGCTGTGCTTTGCCGCGACGGCAAGGCCCTTCCCCTCTCTGTTGATCACAAGCCGGATCGCCCCGATGAGTTGAATCGGATCCAGGAGGCGGGTGGGCGGGTCATATACTGGGACGGCCCACGGGTTCTCGGAGTTTTGGCAATGTCAAGAGCCCTAGGCGACAACTACTTGAAGCCGTACGTGAGCTGCGATCCAGAGGTGACGATCACGGATCGAACTGTGGAGGACGAGTGTCTGATCTTGGCGAGCGACGGGCTCTGGGACGTGGTGTCGAACGACACGGCGTGCGGGGTGGCGAGAATGTGCCTGAGAAGAGAACGGGCCGCTGCTGCGGCCGAGCGCGCAGGGCCGGAGGCGGCGGTGGCGTCGGACAAGGCATGTTCCGACGCGTCGATGCTGCTGACGAAGTTGGCATTGGCCAGGCAGAGCACTGACAACGTGACCGTCGTCGTGGTGAACCTGAGACTCAACACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005801 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009788 GO:0009791 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010162 GO:0010431 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0021700 GO:0022414 GO:0022611 GO:0023051 GO:0023056 GO:0023057 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0033106 GO:0033993 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048582 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048838 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0080050 GO:0090693 GO:0097305 GO:0097438 GO:0098588 GO:0099402 GO:0140096 GO:1900140 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1902039 GO:1905957 GO:1905958 GO:2000026 GO:2000033 GO:2000034 GO:2000241 GO:2000242 GO:2000692
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 ko04931 map04016 map04075 map04931
Pfam Domains
Protein Families
PP2C

Protein Analysis

406

Amino Acids

44.29

Weight (kDa)

6.63

Isoelectric Point (pI)

56.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 114 - 393 1.9e-63 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010786)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29380 AT5G59220 AT5G59220
fragaria_vesca FvH4_3g37010 FvH4_3g37010
malus_domestica MD03G1085400.v1.1 MD11G1093100.v1.1
prunus_persica Prupe.6G068800_v2.0.a1
pyrus_communis pycom03g06750 pycom11g07870
rosa_chinensis RchiOBHm_Chr5g0066401
rosa_laevigata RLG00000035860
rosa_multiflora Rmu_ssc0000249.1_g000014
rosa_roxburghii Rroxscaffold_1G00014640
rosa_rugosa Rorug05G0378000
rosa_samantha Rh5AG436700 Rh5BG452900 Rh5CG475300 Rh5DG468100
rosa_wichuraiana Rw5G040890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 194
AccB1I GGYRCC 1 cut(s) 136
AccBSI CCGCTC 2 cut(s) 502, 565
AccI GTMKAC 1 cut(s) 456
AccII CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
AccIII TCCGGA 2 cut(s) 119, 655
AclWI GGATC 8 cut(s) 91, 669, 682, 804, 814, 827, 926, 960
AcoI YGGCCR 5 cut(s) 361, 463, 720, 1074, 1158
AcsI RAATTY 1 cut(s) 110
AcuI CTGAAG 1 cut(s) 336
AcvI CACGTG 1 cut(s) 481
AcyI GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
AdeI CACNNNGTG 1 cut(s) 1026
AfaI GTAC 5 cut(s) 17, 187, 341, 396, 920
AfiI CCNNNNNNNGG 3 cut(s) 165, 341, 829
AflIII ACRYGT 3 cut(s) 39, 1128, 1212
AgsI TTSAA 3 cut(s) 650, 814, 913
AhdI GACNNNNNGTC 3 cut(s) 43, 388, 1009
AjiI CACGTC 1 cut(s) 1006
AjnI CCWGG 2 cut(s) 822, 1160
AjuI GAANNNNNNNTTGG 2 cut(s) 1139, 1171
AluBI AGCT 7 cut(s) 320, 331, 514, 570, 646, 743, 927
AluI AGCT 7 cut(s) 320, 331, 514, 570, 646, 743, 927
Alw21I GWGCWC 3 cut(s) 233, 333, 1172
Alw26I GTCTC 5 cut(s) 73, 121, 417, 703, 1198
AlwI GGATC 8 cut(s) 91, 669, 682, 804, 814, 827, 926, 960
Ama87I CYCGRG 2 cut(s) 262, 736
Aor13HI TCCGGA 2 cut(s) 119, 655
ApeKI GCWGC 5 cut(s) 74, 927, 1067, 1070, 1138
ApoI RAATTY 1 cut(s) 110
ArsI GACNNNNNNTTYG 2 cut(s) 603, 635
AspA2I CCTAGG 1 cut(s) 895
AspLEI GCGC 4 cut(s) 139, 417, 1083, 1085
AspS9I GGNCC 5 cut(s) 127, 766, 857, 1062, 1088
AsuHPI GGTGA 4 cut(s) 138, 529, 952, 1207
AvaI CYCGRG 2 cut(s) 262, 736
AvrII CCTAGG 1 cut(s) 895
BalI TGGCCA 2 cut(s) 722, 1160
BamHI GGATCC 2 cut(s) 674, 819
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 3 cut(s) 333, 895, 999
BauI CACGAG 1 cut(s) 69
BbrPI CACGTG 1 cut(s) 481
BbsI GAAGAC 1 cut(s) 557
Bbv12I GWGCWC 3 cut(s) 233, 333, 1172
BbvI GCAGC 5 cut(s) 86, 914, 1054, 1057, 1125
BccI CCATC 3 cut(s) 85, 553, 574
BceAI ACGGC 9 cut(s) 351, 478, 570, 621, 668, 775, 871, 901, 1038
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 2 cut(s) 824, 1162
BclI TGATCA 1 cut(s) 784
BcoDI GTCTC 5 cut(s) 73, 121, 417, 703, 1198
BfaI CTAG 1 cut(s) 896
BfmI CTRYAG 1 cut(s) 224
BfoI RGCGCY 1 cut(s) 140
BglI GCCNNNNNGGC 3 cut(s) 134, 612, 759
BglII AGATCT 1 cut(s) 9
BlnI CCTAGG 1 cut(s) 895
Bme1390I CCNGG 2 cut(s) 824, 1162
BmeRI GACNNNNNGTC 3 cut(s) 43, 388, 1009
BmeT110I CYCGRG 2 cut(s) 262, 736
BmgBI CACGTC 1 cut(s) 1006
BmgT120I GGNCC 5 cut(s) 127, 766, 857, 1062, 1088
BmiI GGNNCC 5 cut(s) 129, 138, 605, 676, 821
BmrFI CCNGG 2 cut(s) 824, 1162
BmrI ACTGGG 1 cut(s) 859
BmsI GCATC 4 cut(s) 188, 426, 495, 1125
BmuI ACTGGG 1 cut(s) 859
BoxI GACNNNNGTC 2 cut(s) 972, 1187
BpiI GAAGAC 1 cut(s) 557
BsaAI YACGTR 4 cut(s) 185, 481, 922, 1215
BsaBI GATNNNNATC 1 cut(s) 95
BsaHI GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
BsaJI CCNNGG 4 cut(s) 466, 663, 860, 895
BsaWI WCCGGW 4 cut(s) 119, 148, 233, 655
BsaXI ACNNNNNCTCC 5 cut(s) 29, 458, 488, 956, 986
Bsc4I CCNNNNNNNGG 3 cut(s) 165, 341, 829
Bse118I RCCGGY 2 cut(s) 133, 411
Bse1I ACTGG 2 cut(s) 351, 854
Bse3DI GCAATG 1 cut(s) 888
Bse8I GATNNNNATC 1 cut(s) 95
BseAI TCCGGA 2 cut(s) 119, 655
BseBI CCWGG 2 cut(s) 824, 1162
BseDI CCNNGG 4 cut(s) 466, 663, 860, 895
BseGI GGATG 3 cut(s) 96, 510, 585
BseJI GATNNNNATC 1 cut(s) 95
BseLI CCNNNNNNNGG 3 cut(s) 165, 341, 829
BseMI GCAATG 1 cut(s) 888
BseMII CTCAG 2 cut(s) 1040, 1193
BseNI ACTGG 2 cut(s) 351, 854
BsePI GCGCGC 1 cut(s) 1081
BseRI GAGGAG 1 cut(s) 100
BseX3I CGGCCG 2 cut(s) 361, 1074
BseXI GCAGC 5 cut(s) 86, 914, 1054, 1057, 1125
Bsh1236I CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
Bsh1285I CGRYCG 2 cut(s) 364, 1077
BshNI GGYRCC 1 cut(s) 136
BsiEI CGRYCG 2 cut(s) 364, 1077
BsiHKAI GWGCWC 3 cut(s) 233, 333, 1172
BsiHKCI CYCGRG 2 cut(s) 262, 736
BsiSI CCGG 9 cut(s) 120, 134, 140, 149, 234, 412, 656, 794, 1091
BsiWI CGTACG 2 cut(s) 185, 918
BslFI GGGAC 3 cut(s) 296, 866, 1016
BslI CCNNNNNNNGG 3 cut(s) 165, 341, 829
BsmAI GTCTC 5 cut(s) 73, 121, 417, 703, 1198
BsmBI CGTCTC 4 cut(s) 73, 121, 417, 703
BsmFI GGGAC 3 cut(s) 296, 866, 1016
BsoBI CYCGRG 2 cut(s) 262, 736
Bsp1286I GDGCHC 5 cut(s) 233, 333, 895, 999, 1172
Bsp13I TCCGGA 2 cut(s) 119, 655
Bsp1407I TGTACA 1 cut(s) 394
Bsp68I TCGCGA 1 cut(s) 207
BspCNI CTCAG 2 cut(s) 1041, 1194
BspEI TCCGGA 2 cut(s) 119, 655
BspFNI CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
BspLI GGNNCC 5 cut(s) 129, 138, 605, 676, 821
BspMAI CTGCAG 1 cut(s) 228
BspPI GGATC 8 cut(s) 91, 669, 682, 804, 814, 827, 926, 960
BspT107I GGYRCC 1 cut(s) 136
BsrBI CCGCTC 2 cut(s) 502, 565
BsrDI GCAATG 1 cut(s) 888
BsrFI RCCGGY 2 cut(s) 133, 411
BsrGI TGTACA 1 cut(s) 394
BsrI ACTGG 2 cut(s) 351, 854
BssAI RCCGGY 2 cut(s) 133, 411
BssECI CCNNGG 4 cut(s) 466, 663, 860, 895
BssHII GCGCGC 1 cut(s) 1081
BssNI GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
BssSI CACGAG 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 895
Bst2BI CACGAG 1 cut(s) 69
Bst2UI CCWGG 2 cut(s) 824, 1162
Bst4CI ACNGT 3 cut(s) 470, 961, 1186
Bst6I CTCTTC 2 cut(s) 243, 1048
BstACI GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
BstAUI TGTACA 1 cut(s) 394
BstBAI YACGTR 4 cut(s) 185, 481, 922, 1215
BstC8I GCNNGC 5 cut(s) 413, 644, 988, 1027, 1083
BstDEI CTNAG 2 cut(s) 1049, 1202
BstDSI CCRYGG 2 cut(s) 466, 860
BstF5I GGATG 3 cut(s) 96, 510, 585
BstFNI CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 4 cut(s) 139, 417, 1083, 1085
BstMAI GTCTC 5 cut(s) 73, 121, 417, 703, 1198
BstMCI CGRYCG 2 cut(s) 364, 1077
BstNI CCWGG 2 cut(s) 824, 1162
BstNSI RCATGY 1 cut(s) 1122
BstPAI GACNNNNGTC 2 cut(s) 972, 1187
BstSCI CCNGG 2 cut(s) 822, 1160
BstSFI CTRYAG 1 cut(s) 224
BstUI CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
BstV1I GCAGC 5 cut(s) 86, 914, 1054, 1057, 1125
BstV2I GAAGAC 1 cut(s) 557
BstX2I RGATCY 4 cut(s) 9, 96, 674, 819
BstYI RGATCY 4 cut(s) 9, 96, 674, 819
BstZI CGGCCG 2 cut(s) 361, 1074
BtgI CCRYGG 2 cut(s) 466, 860
BtgZI GCGATG 1 cut(s) 572
BtrI CACGTC 1 cut(s) 1006
BtsCI GGATG 3 cut(s) 96, 510, 585
BtsI GCAGTG 1 cut(s) 233
BtsIMutI CAGTG 2 cut(s) 233, 1170
BtuMI TCGCGA 1 cut(s) 207
Cac8I GCNNGC 5 cut(s) 413, 644, 988, 1027, 1083
CciNI GCGGCCGC 1 cut(s) 361
CfoI GCGC 4 cut(s) 139, 417, 1083, 1085
Cfr10I RCCGGY 2 cut(s) 133, 411
Cfr13I GGNCC 5 cut(s) 127, 766, 857, 1062, 1088
CseI GACGC 9 cut(s) 30, 47, 282, 392, 434, 607, 1095, 1119, 1136
Csp6I GTAC 5 cut(s) 16, 186, 340, 395, 919
CviAII CATG 3 cut(s) 509, 538, 1119
CviQI GTAC 5 cut(s) 16, 186, 340, 395, 919
DdeI CTNAG 2 cut(s) 1049, 1202
DinI GGCGCC 1 cut(s) 138
DraIII CACNNNGTG 1 cut(s) 1026
DriI GACNNNNNGTC 3 cut(s) 43, 388, 1009
EaeI YGGCCR 5 cut(s) 361, 463, 720, 1074, 1158
EagI CGGCCG 2 cut(s) 361, 1074
Eam1104I CTCTTC 2 cut(s) 243, 1048
Eam1105I GACNNNNNGTC 3 cut(s) 43, 388, 1009
EarI CTCTTC 2 cut(s) 243, 1048
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 331
EclXI CGGCCG 2 cut(s) 361, 1074
Eco130I CCWWGG 1 cut(s) 895
Eco24I GRGCYC 3 cut(s) 333, 895, 999
Eco52I CGGCCG 2 cut(s) 361, 1074
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 1 cut(s) 336
Eco72I CACGTG 1 cut(s) 481
Eco88I CYCGRG 2 cut(s) 262, 736
EcoICRI GAGCTC 1 cut(s) 331
EcoO109I RGGNCCY 1 cut(s) 766
EcoRII CCWGG 2 cut(s) 822, 1160
EcoT14I CCWWGG 1 cut(s) 895
EcoT22I ATGCAT 1 cut(s) 510
EcoT38I GRGCYC 3 cut(s) 333, 895, 999
EgeI GGCGCC 1 cut(s) 138
EheI GGCGCC 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 895
Esp3I CGTCTC 4 cut(s) 73, 121, 417, 703
FaeI CATG 3 cut(s) 512, 541, 1122
FaiI YATR 6 cut(s) 377, 510, 539, 845, 847, 1120
FaqI GGGAC 3 cut(s) 296, 866, 1016
FatI CATG 3 cut(s) 508, 537, 1118
FauI CCCGC 3 cut(s) 823, 831, 1022
FbaI TGATCA 1 cut(s) 784
FblI GTMKAC 1 cut(s) 456
FokI GGATG 3 cut(s) 103, 517, 592
FriOI GRGCYC 3 cut(s) 333, 895, 999
FspBI CTAG 1 cut(s) 896
GlaI GCGC 4 cut(s) 138, 416, 1082, 1084
HaeII RGCGCY 1 cut(s) 140
HapII CCGG 9 cut(s) 120, 134, 140, 149, 234, 412, 656, 794, 1091
HgaI GACGC 9 cut(s) 30, 47, 282, 392, 434, 607, 1095, 1119, 1136
HhaI GCGC 4 cut(s) 139, 417, 1083, 1085
Hin1I GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
Hin1II CATG 3 cut(s) 512, 541, 1122
Hin6I GCGC 4 cut(s) 137, 415, 1081, 1083
HinP1I GCGC 4 cut(s) 137, 415, 1081, 1083
HincII GTYRAC 1 cut(s) 279
HindII GTYRAC 1 cut(s) 279
HindIII AAGCTT 1 cut(s) 318
HinfI GANTC 6 cut(s) 143, 265, 659, 734, 814, 1206
HpaII CCGG 9 cut(s) 120, 134, 140, 149, 234, 412, 656, 794, 1091
HphI GGTGA 4 cut(s) 138, 529, 952, 1207
Hpy166II GTNNAC 5 cut(s) 68, 279, 397, 457, 1198
Hpy188III TCNNGA 9 cut(s) 69, 120, 206, 334, 656, 704, 738, 888, 935
Hpy8I GTNNAC 5 cut(s) 68, 279, 397, 457, 1198
HpyAV CCTTC 3 cut(s) 514, 605, 779
HpyCH4III ACNGT 3 cut(s) 470, 961, 1186
HpyCH4IV ACGT 9 cut(s) 103, 184, 191, 309, 480, 921, 1005, 1179, 1214
HpyCH4V TGCA 5 cut(s) 108, 226, 442, 495, 508
HpyF3I CTNAG 2 cut(s) 1049, 1202
HpySE526I ACGT 9 cut(s) 103, 184, 191, 309, 480, 921, 1005, 1179, 1214
Hsp92I GRCGYC 5 cut(s) 137, 191, 426, 618, 1106
Hsp92II CATG 3 cut(s) 512, 541, 1122
HspAI GCGC 4 cut(s) 137, 415, 1081, 1083
KasI GGCGCC 1 cut(s) 136
Kpn2I TCCGGA 2 cut(s) 119, 655
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
Ksp22I TGATCA 1 cut(s) 784
LmnI GCTCC 6 cut(s) 236, 336, 479, 562, 567, 603
Lsp1109I GCAGC 5 cut(s) 86, 914, 1054, 1057, 1125
LweI GCATC 4 cut(s) 188, 426, 495, 1125
MaeI CTAG 1 cut(s) 896
MaeII ACGT 9 cut(s) 103, 184, 191, 309, 480, 921, 1005, 1179, 1214
MaeIII GTNAC 3 cut(s) 144, 940, 1180
MbiI CCGCTC 2 cut(s) 502, 565
MboII GAAGA 5 cut(s) 181, 231, 260, 562, 1065
MfeI CAATTG 3 cut(s) 437, 631, 724
MflI RGATCY 4 cut(s) 9, 96, 674, 819
MhlI GDGCHC 5 cut(s) 233, 333, 895, 999, 1172
MlsI TGGCCA 2 cut(s) 722, 1160
MluCI AATT 5 cut(s) 110, 154, 437, 631, 724
MluI ACGCGT 2 cut(s) 39, 1128
MluNI TGGCCA 2 cut(s) 722, 1160
Mly113I GGCGCC 1 cut(s) 137
MlyI GAGTC 5 cut(s) 152, 274, 668, 728, 1200
MmeI TCCRAC 7 cut(s) 124, 192, 267, 601, 652, 1089, 1149
Mox20I TGGCCA 2 cut(s) 722, 1160
Mph1103I ATGCAT 1 cut(s) 510
MroI TCCGGA 2 cut(s) 119, 655
MroNI GCCGGC 1 cut(s) 411
MscI TGGCCA 2 cut(s) 722, 1160
Msp20I TGGCCA 2 cut(s) 722, 1160
MspA1I CMGCKG 1 cut(s) 1067
MspI CCGG 9 cut(s) 120, 134, 140, 149, 234, 412, 656, 794, 1091
MspR9I CCNGG 2 cut(s) 824, 1162
MunI CAATTG 3 cut(s) 437, 631, 724
MvaI CCWGG 2 cut(s) 824, 1162
MvnI CGCG 6 cut(s) 41, 207, 609, 756, 1083, 1130
NaeI GCCGGC 1 cut(s) 413
NarI GGCGCC 1 cut(s) 137
NgoMIV GCCGGC 1 cut(s) 411
NlaIII CATG 3 cut(s) 512, 541, 1122
NlaIV GGNNCC 5 cut(s) 129, 138, 605, 676, 821
NmeAIII GCCGAG 1 cut(s) 1102
NmuCI GTSAC 3 cut(s) 144, 940, 1180
NotI GCGGCCGC 1 cut(s) 361
NruI TCGCGA 1 cut(s) 207
NsiI ATGCAT 1 cut(s) 510
NspI RCATGY 1 cut(s) 1122
PaeR7I CTCGAG 1 cut(s) 736
PauI GCGCGC 1 cut(s) 1081
PcsI WCGNNNNNNNCGW 5 cut(s) 456, 693, 702, 927, 1185
PdiI GCCGGC 1 cut(s) 413
PfeI GAWTC 1 cut(s) 814
Pfl23II CGTACG 2 cut(s) 185, 918
PflFI GACNNNGTC 1 cut(s) 193
PfoI TCCNGGA 1 cut(s) 822
PleI GAGTC 5 cut(s) 151, 273, 667, 728, 1200
PluTI GGCGCC 1 cut(s) 140
PmaCI CACGTG 1 cut(s) 481
PmlI CACGTG 1 cut(s) 481
PpsI GAGTC 5 cut(s) 151, 273, 667, 728, 1200
Ppu21I YACGTR 4 cut(s) 185, 481, 922, 1215
PshAI GACNNNNGTC 2 cut(s) 972, 1187
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 822, 1160
PspCI CACGTG 1 cut(s) 481
PspGI CCWGG 2 cut(s) 822, 1160
PspLI CGTACG 2 cut(s) 185, 918
PspN4I GGNNCC 5 cut(s) 129, 138, 605, 676, 821
PspPI GGNCC 5 cut(s) 127, 766, 857, 1062, 1088
PstI CTGCAG 1 cut(s) 228
PsuI RGATCY 4 cut(s) 9, 96, 674, 819
PsyI GACNNNGTC 1 cut(s) 193
PteI GCGCGC 1 cut(s) 1081
RruI TCGCGA 1 cut(s) 207
RsaI GTAC 5 cut(s) 17, 187, 341, 396, 920
RsaNI GTAC 5 cut(s) 16, 186, 340, 395, 919
SacI GAGCTC 1 cut(s) 333
Sau96I GGNCC 5 cut(s) 127, 766, 857, 1062, 1088
SchI GAGTC 5 cut(s) 152, 274, 668, 728, 1200
ScrFI CCNGG 2 cut(s) 824, 1162
SduI GDGCHC 5 cut(s) 233, 333, 895, 999, 1172
SfaNI GCATC 4 cut(s) 188, 426, 495, 1125
SfcI CTRYAG 1 cut(s) 224
SfoI GGCGCC 1 cut(s) 138
Sfr274I CTCGAG 1 cut(s) 736
SgrAI CRCCGGYG 1 cut(s) 133
SlaI CTCGAG 1 cut(s) 736
SmlI CTYRAG 1 cut(s) 736
SmoI CTYRAG 1 cut(s) 736
Sse9I AATT 5 cut(s) 110, 154, 437, 631, 724
SspDI GGCGCC 1 cut(s) 136
SspMI CTAG 1 cut(s) 896
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 2 cut(s) 822, 1160
StyI CCWWGG 1 cut(s) 895
TaaI ACNGT 3 cut(s) 470, 961, 1186
TaiI ACGT 9 cut(s) 106, 187, 194, 312, 483, 924, 1008, 1182, 1217
TaqI TCGA 5 cut(s) 305, 737, 955, 1013, 1133
TasI AATT 5 cut(s) 110, 154, 437, 631, 724
TatI WGTACW 1 cut(s) 394
TfiI GAWTC 1 cut(s) 814
TscAI CASTG 2 cut(s) 233, 1177
TseFI GTSAC 3 cut(s) 144, 940, 1180
TseI GCWGC 5 cut(s) 74, 927, 1067, 1070, 1138
Tsp45I GTSAC 3 cut(s) 144, 940, 1180
TspGWI ACGGA 5 cut(s) 33, 97, 343, 357, 965
TspRI CASTG 2 cut(s) 233, 1177
Tth111I GACNNNGTC 1 cut(s) 193
XapI RAATTY 1 cut(s) 110
XceI RCATGY 1 cut(s) 1122
XcmI CCANNNNNNNNNTGG 1 cut(s) 830
XhoI CTCGAG 1 cut(s) 736
XmaJI CCTAGG 1 cut(s) 895
XmiI GTMKAC 1 cut(s) 456
XspI CTAG 1 cut(s) 896
ZraI GACGTC 1 cut(s) 192
Zsp2I ATGCAT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.