MD11G1113900.v1.1

Protein UPSTREAM OF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0008643
Physical Location & Seq
Reverse (-)
10287518 .. 10291853
4336 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1113900.v1.1.491

Sequence Viewer

Length: 1347 bp
ATGGCTGTCGCTTCCAGAGGCCGGCCCTCCCACCTCCAAATCCCCAGCAAATGGCGCGACTCGGAAACCAGTCCGGACCGGATTAGTCCTGCCCAGACCGGTCCCAGTCTCCCCATCACTCCCCGAAAAGTCCCTGTCGTTTACTACCTCTCCAGGAACGGCCAGCTCGAGCACCCTCACTTCATGGAAGTCCCTCTCTCCTCTCCCCGTGGCCTCTTTCTCAAAGATGTTATTAACCGGTTGAACTTGCTACGTGGCAAGGGCATGGCTTTGATGTACTCCTGGTCTTCCAAACGGAGCTACAAAACCGGCTTCGTGTGGCACGATTTGACGGAGGACGATTTGATACACCCGTCGCACGGCCACGAGTACGTGCTCAAGGGGTCGGAGCTTCTTGACCCGCCGCTGAACCATATGGCTCTCGAGACGGCGTCGTCGAGGTCTCTGAGACCGCCGCCAGAGGCGCTGAAGTCCGCCGAAGATTTCGAATCTCCGGTGATTTCACGCCAGCGAAACCAGTCGTGGAGTTCGATCGATTTGAACGAGTACAAGGTGTACAAGACCGAGTCAGTCGGCGAGTCCGCCAGGAAAGCGGCCGCCGACGCGTCGACTCAGACCGACGAAAACCGGCACCGACGTCGTGTTGTTCGAGACGAGCACGAGGAAAAAGGTCAAGGTCAAAGTCAGCGCGAGGTGATTCAGATTCAGAGTCAGAGTACGGAGCTGAGCAGGGGCGAGATGTCGCCTCCGCCGTCTGATTCGAGCCCCGAAACGCTCGAGTCGCTGATGAAGGCGGATGGGCGGCTGGTGCTCTGCACGAACGGGGCGAACGAGGAGGAGGCAGTGAACCAGACGGCTGAGATCTGTCCAACTGGGAAGATGAAGGCGTCAACGGTCCTGATGCAATTGTTATCGTGCGGCTCGATCTCGTTCAGGGACTGCGGATCCACGGCGGTGAGGGAGCAGGGGTTCTCGCTGATTGGGCATTACAAGCCTAGGCTACCACGTGGCTTGACGGGAAATCAGGTCGGGACGGAGAGCGTAATTTCGAATTTAGCGGGGGTAAAATTGGAAGATAAGGAGTATTTTAGCGGGAGCTTAATTGAGACCAAGAAAGAGGCGGTTCCATCTTTAAAGAGGTCTTCTTCTTACAACGCAGATAGGAGTGCGCAGCTGCAATTGGAGGAAACTGAGAAAGGTGGAGTGCGAGCAAAGTGCATTCCCAGGAAACCCAAAGGAATACCCACCAAGAGAGAGATCAACCACATCGCCTCTTGTAGTGATGGTAGTTGTACTAGTAGTAACGGTCATGTAGGAGGGAGCAAACGACTCGAGGTTCATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF966

Protein Analysis

449

Amino Acids

49.48

Weight (kDa)

8.69

Isoelectric Point (pI)

59.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SOK PF06136 44 - 132 3.1e-49 SOSEKI protein DIX-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 433
AatII GACGTC 1 cut(s) 640
Acc16I TGCGCA 1 cut(s) 1170
AccB1I GGYRCC 1 cut(s) 630
AccB7I CCANNNNNTGG 1 cut(s) 51
AccI GTMKAC 1 cut(s) 608
AccII CGCG 3 cut(s) 57, 605, 690
AccIII TCCGGA 1 cut(s) 73
AclWI GGATC 2 cut(s) 939, 952
AcoI YGGCCR 3 cut(s) 160, 361, 594
AcsI RAATTY 1 cut(s) 1051
AcuI CTGAAG 1 cut(s) 488
AcvI CACGTG 1 cut(s) 1007
AcyI GRCGYC 3 cut(s) 431, 637, 887
AfaI GTAC 6 cut(s) 278, 371, 548, 557, 718, 1294
AfiI CCNNNNNNNGG 3 cut(s) 21, 51, 359
AflIII ACRYGT 1 cut(s) 603
AgeI ACCGGT 2 cut(s) 98, 237
AgsI TTSAA 2 cut(s) 244, 541
AhlI ACTAGT 1 cut(s) 1295
AjnI CCWGG 4 cut(s) 152, 281, 584, 1223
AleI CACNNNNGTG 1 cut(s) 953
AloI GAACNNNNNNTCC 2 cut(s) 953, 985
AluBI AGCT 6 cut(s) 166, 300, 391, 724, 1098, 1174
AluI AGCT 6 cut(s) 166, 300, 391, 724, 1098, 1174
Alw21I GWGCWC 4 cut(s) 174, 378, 660, 813
Alw26I GTCTC 6 cut(s) 113, 419, 442, 447, 645, 1100
AlwI GGATC 2 cut(s) 939, 952
AlwNI CAGNNNCTG 1 cut(s) 939
Ama87I CYCGRG 4 cut(s) 167, 422, 776, 1331
Aor13HI TCCGGA 1 cut(s) 73
AoxI GGCC 6 cut(s) 19, 23, 160, 211, 361, 594
ApeKI GCWGC 2 cut(s) 1171, 1174
ApoI RAATTY 1 cut(s) 1051
AsiGI ACCGGT 2 cut(s) 98, 237
AspA2I CCTAGG 1 cut(s) 995
AspLEI GCGC 4 cut(s) 57, 466, 690, 1171
AspS9I GGNCC 4 cut(s) 24, 76, 101, 895
AsuHPI GGTGA 3 cut(s) 508, 706, 967
AsuII TTCGAA 2 cut(s) 486, 1049
AvaI CYCGRG 4 cut(s) 167, 422, 776, 1331
AvaII GGWCC 3 cut(s) 76, 101, 895
AvrII CCTAGG 1 cut(s) 995
BaeI ACNNNNGTAYC 2 cut(s) 338, 371
BamHI GGATCC 1 cut(s) 944
BanI GGYRCC 1 cut(s) 630
BanII GRGCYC 1 cut(s) 767
BauI CACGAG 2 cut(s) 365, 659
BbrPI CACGTG 1 cut(s) 1007
BbsI GAAGAC 2 cut(s) 279, 1134
Bbv12I GWGCWC 4 cut(s) 174, 378, 660, 813
BbvI GCAGC 2 cut(s) 1161, 1183
BccI CCATC 4 cut(s) 122, 791, 1135, 1277
BceAI ACGGC 6 cut(s) 175, 376, 444, 736, 870, 966
BcgI CGANNNNNNTGC 6 cut(s) 620, 654, 1197, 1231, 1312, 1346
BciT130I CCWGG 4 cut(s) 154, 283, 586, 1225
BcoDI GTCTC 6 cut(s) 113, 419, 442, 447, 645, 1100
BcuI ACTAGT 1 cut(s) 1295
BfaI CTAG 2 cut(s) 996, 1296
BfoI RGCGCY 1 cut(s) 467
BglII AGATCT 1 cut(s) 861
BisI GCNGC 8 cut(s) 404, 455, 594, 597, 803, 919, 1172, 1175
BlnI CCTAGG 1 cut(s) 995
BlpI GCTNAGC 1 cut(s) 725
BlsI GCNGC 8 cut(s) 405, 456, 595, 598, 804, 920, 1173, 1176
Bme1390I CCNGG 4 cut(s) 154, 283, 586, 1225
Bme18I GGWCC 3 cut(s) 76, 101, 895
BmeT110I CYCGRG 4 cut(s) 167, 422, 776, 1331
BmgT120I GGNCC 4 cut(s) 24, 76, 101, 895
BmiI GGNNCC 4 cut(s) 103, 632, 946, 1125
BmrFI CCNGG 4 cut(s) 154, 283, 586, 1225
BmrI ACTGGG 2 cut(s) 99, 882
BmsI GCATC 1 cut(s) 891
BmuI ACTGGG 2 cut(s) 99, 882
BpiI GAAGAC 2 cut(s) 279, 1134
BpmI CTGGAG 1 cut(s) 136
Bpu1102I GCTNAGC 1 cut(s) 725
Bpu14I TTCGAA 2 cut(s) 486, 1049
BpuEI CTTGAG 1 cut(s) 362
Bsa29I ATCGAT 1 cut(s) 534
BsaAI YACGTR 3 cut(s) 254, 373, 1007
BsaHI GRCGYC 3 cut(s) 431, 637, 887
BsaI GGTCTC 3 cut(s) 442, 447, 1100
BsaJI CCNNGG 4 cut(s) 208, 948, 995, 1223
BsaWI WCCGGW 5 cut(s) 73, 78, 98, 237, 493
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 953, 983
Bsc4I CCNNNNNNNGG 3 cut(s) 21, 51, 359
Bse118I RCCGGY 5 cut(s) 21, 98, 237, 308, 627
Bse1I ACTGG 4 cut(s) 69, 105, 517, 877
BseAI TCCGGA 1 cut(s) 73
BseBI CCWGG 4 cut(s) 154, 283, 586, 1225
BseCI ATCGAT 1 cut(s) 534
BseDI CCNNGG 4 cut(s) 208, 948, 995, 1223
BseGI GGATG 1 cut(s) 802
BseLI CCNNNNNNNGG 3 cut(s) 21, 51, 359
BseMII CTCAG 5 cut(s) 437, 626, 716, 849, 1182
BseNI ACTGG 4 cut(s) 69, 105, 517, 877
BseRI GAGGAG 3 cut(s) 190, 848, 851
BseX3I CGGCCG 1 cut(s) 594
BseXI GCAGC 2 cut(s) 1161, 1183
BseYI CCCAGC 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 799
Bsh1236I CGCG 3 cut(s) 57, 605, 690
Bsh1285I CGRYCG 2 cut(s) 534, 597
BshFI GGCC 6 cut(s) 21, 25, 162, 213, 363, 596
BshNI GGYRCC 1 cut(s) 630
BshTI ACCGGT 2 cut(s) 98, 237
BshVI ATCGAT 1 cut(s) 534
BsiEI CGRYCG 2 cut(s) 534, 597
BsiHKAI GWGCWC 4 cut(s) 174, 378, 660, 813
BsiHKCI CYCGRG 4 cut(s) 167, 422, 776, 1331
BsiSI CCGG 8 cut(s) 22, 74, 79, 99, 238, 309, 494, 628
BslFI GGGAC 5 cut(s) 87, 116, 176, 950, 1045
BslI CCNNNNNNNGG 3 cut(s) 21, 51, 359
BsmAI GTCTC 6 cut(s) 113, 419, 442, 447, 645, 1100
BsmBI CGTCTC 2 cut(s) 419, 645
BsmFI GGGAC 5 cut(s) 87, 116, 176, 950, 1045
BsmI GAATGC 1 cut(s) 1218
BsnI GGCC 6 cut(s) 21, 25, 162, 213, 363, 596
Bso31I GGTCTC 3 cut(s) 442, 447, 1100
BsoBI CYCGRG 4 cut(s) 167, 422, 776, 1331
Bsp119I TTCGAA 2 cut(s) 486, 1049
Bsp1286I GDGCHC 5 cut(s) 174, 378, 660, 767, 813
Bsp13I TCCGGA 1 cut(s) 73
Bsp1407I TGTACA 1 cut(s) 555
Bsp143I GATC 5 cut(s) 531, 861, 924, 944, 1257
Bsp1720I GCTNAGC 1 cut(s) 725
BspANI GGCC 6 cut(s) 21, 25, 162, 213, 363, 596
BspCNI CTCAG 5 cut(s) 438, 625, 717, 850, 1183
BspDI ATCGAT 1 cut(s) 534
BspEI TCCGGA 1 cut(s) 73
BspFNI CGCG 3 cut(s) 57, 605, 690
BspLI GGNNCC 4 cut(s) 103, 632, 946, 1125
BspPI GGATC 2 cut(s) 939, 952
BspT104I TTCGAA 2 cut(s) 486, 1049
BspT107I GGYRCC 1 cut(s) 630
BspTNI GGTCTC 3 cut(s) 442, 447, 1100
BsrFI RCCGGY 5 cut(s) 21, 98, 237, 308, 627
BsrGI TGTACA 1 cut(s) 555
BsrI ACTGG 4 cut(s) 69, 105, 517, 877
BssAI RCCGGY 5 cut(s) 21, 98, 237, 308, 627
BssECI CCNNGG 4 cut(s) 208, 948, 995, 1223
BssMI GATC 5 cut(s) 531, 861, 924, 944, 1257
BssNI GRCGYC 3 cut(s) 431, 637, 887
BssSI CACGAG 2 cut(s) 365, 659
BssT1I CCWWGG 1 cut(s) 995
Bst2BI CACGAG 2 cut(s) 365, 659
Bst2UI CCWGG 4 cut(s) 154, 283, 586, 1225
Bst4CI ACNGT 2 cut(s) 895, 1307
BstACI GRCGYC 3 cut(s) 431, 637, 887
BstAUI TGTACA 1 cut(s) 555
BstBAI YACGTR 3 cut(s) 254, 373, 1007
BstBI TTCGAA 2 cut(s) 486, 1049
BstC8I GCNNGC 4 cut(s) 23, 164, 509, 1209
BstDEI CTNAG 5 cut(s) 446, 612, 725, 858, 1191
BstDSI CCRYGG 2 cut(s) 208, 948
BstF5I GGATG 1 cut(s) 802
BstFNI CGCG 3 cut(s) 57, 605, 690
BstH2I RGCGCY 1 cut(s) 467
BstHHI GCGC 4 cut(s) 57, 466, 690, 1171
BstKTI GATC 5 cut(s) 534, 864, 927, 947, 1260
BstMAI GTCTC 6 cut(s) 113, 419, 442, 447, 645, 1100
BstMBI GATC 5 cut(s) 531, 861, 924, 944, 1257
BstMCI CGRYCG 2 cut(s) 534, 597
BstMWI GCNNNNNNNGC 8 cut(s) 54, 463, 590, 602, 781, 808, 982, 991
BstNI CCWGG 4 cut(s) 154, 283, 586, 1225
BstSCI CCNGG 4 cut(s) 152, 281, 584, 1223
BstUI CGCG 3 cut(s) 57, 605, 690
BstV1I GCAGC 2 cut(s) 1161, 1183
BstV2I GAAGAC 2 cut(s) 279, 1134
BstX2I RGATCY 2 cut(s) 861, 944
BstYI RGATCY 2 cut(s) 861, 944
BstZI CGGCCG 1 cut(s) 594
Bsu15I ATCGAT 1 cut(s) 534
BsuRI GGCC 6 cut(s) 21, 25, 162, 213, 363, 596
BsuTUI ATCGAT 1 cut(s) 534
BtgI CCRYGG 2 cut(s) 208, 948
BtgZI GCGATG 1 cut(s) 1252
BtsCI GGATG 1 cut(s) 802
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 1 cut(s) 849
Cac8I GCNNGC 4 cut(s) 23, 164, 509, 1209
CaiI CAGNNNCTG 1 cut(s) 939
CciNI GCGGCCGC 1 cut(s) 594
CfoI GCGC 4 cut(s) 57, 466, 690, 1171
Cfr10I RCCGGY 5 cut(s) 21, 98, 237, 308, 627
Cfr13I GGNCC 4 cut(s) 24, 76, 101, 895
ClaI ATCGAT 1 cut(s) 534
CpoI CGGWCCG 1 cut(s) 76
CseI GACGC 4 cut(s) 420, 594, 611, 876
Csp6I GTAC 6 cut(s) 277, 370, 547, 556, 717, 1293
CspAI ACCGGT 2 cut(s) 98, 237
CspCI CAANNNNNGTGG 2 cut(s) 993, 1028
CspI CGGWCCG 1 cut(s) 76
CviAII CATG 3 cut(s) 184, 265, 1310
CviQI GTAC 6 cut(s) 277, 370, 547, 556, 717, 1293
DdeI CTNAG 5 cut(s) 446, 612, 725, 858, 1191
DpnI GATC 5 cut(s) 533, 863, 926, 946, 1259
DpnII GATC 5 cut(s) 531, 861, 924, 944, 1257
DraI TTTAAA 1 cut(s) 1134
DrdI GACNNNNNNGTC 1 cut(s) 433
DseDI GACNNNNNNGTC 1 cut(s) 433
EaeI YGGCCR 3 cut(s) 160, 361, 594
EagI CGGCCG 1 cut(s) 594
EciI GGCGGA 4 cut(s) 463, 571, 738, 809
EclXI CGGCCG 1 cut(s) 594
Eco130I CCWWGG 1 cut(s) 995
Eco24I GRGCYC 1 cut(s) 767
Eco31I GGTCTC 3 cut(s) 442, 447, 1100
Eco47I GGWCC 3 cut(s) 76, 101, 895
Eco52I CGGCCG 1 cut(s) 594
Eco57I CTGAAG 1 cut(s) 488
Eco72I CACGTG 1 cut(s) 1007
Eco88I CYCGRG 4 cut(s) 167, 422, 776, 1331
EcoRII CCWGG 4 cut(s) 152, 281, 584, 1223
EcoT14I CCWWGG 1 cut(s) 995
EcoT38I GRGCYC 1 cut(s) 767
ErhI CCWWGG 1 cut(s) 995
Esp3I CGTCTC 2 cut(s) 419, 645
FaeI CATG 3 cut(s) 187, 268, 1313
FaiI YATR 5 cut(s) 185, 266, 414, 416, 1311
FaqI GGGAC 5 cut(s) 87, 116, 176, 950, 1045
FatI CATG 3 cut(s) 183, 264, 1309
FauI CCCGC 3 cut(s) 408, 1051, 1085
FauNDI CATATG 1 cut(s) 414
FblI GTMKAC 1 cut(s) 608
Fnu4HI GCNGC 8 cut(s) 404, 455, 594, 597, 803, 919, 1172, 1175
FokI GGATG 1 cut(s) 809
FriOI GRGCYC 1 cut(s) 767
FseI GGCCGGCC 1 cut(s) 25
Fsp4HI GCNGC 8 cut(s) 404, 455, 594, 597, 803, 919, 1172, 1175
FspBI CTAG 2 cut(s) 996, 1296
FspI TGCGCA 1 cut(s) 1170
GlaI GCGC 4 cut(s) 56, 465, 689, 1170
GluI GCNGC 8 cut(s) 404, 455, 594, 597, 803, 919, 1172, 1175
GsaI CCCAGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 136
HaeII RGCGCY 1 cut(s) 467
HaeIII GGCC 6 cut(s) 21, 25, 162, 213, 363, 596
HapII CCGG 8 cut(s) 22, 74, 79, 99, 238, 309, 494, 628
HgaI GACGC 4 cut(s) 420, 594, 611, 876
HhaI GCGC 4 cut(s) 57, 466, 690, 1171
Hin1I GRCGYC 3 cut(s) 431, 637, 887
Hin1II CATG 3 cut(s) 187, 268, 1313
Hin6I GCGC 4 cut(s) 55, 464, 688, 1169
HinP1I GCGC 4 cut(s) 55, 464, 688, 1169
HincII GTYRAC 2 cut(s) 609, 891
HindII GTYRAC 2 cut(s) 609, 891
HpaII CCGG 8 cut(s) 22, 74, 79, 99, 238, 309, 494, 628
HphI GGTGA 3 cut(s) 508, 706, 967
Hpy166II GTNNAC 5 cut(s) 142, 556, 609, 847, 891
Hpy188I TCNGA 8 cut(s) 64, 388, 447, 615, 702, 708, 714, 757
Hpy188III TCNNGA 8 cut(s) 15, 74, 395, 422, 424, 650, 898, 1030
Hpy8I GTNNAC 5 cut(s) 142, 556, 609, 847, 891
Hpy99I CGWCG 8 cut(s) 358, 436, 439, 605, 610, 623, 639, 642
HpyAV CCTTC 2 cut(s) 784, 877
HpyCH4III ACNGT 2 cut(s) 895, 1307
HpyCH4IV ACGT 4 cut(s) 253, 372, 637, 1006
HpyCH4V TGCA 4 cut(s) 816, 904, 1177, 1218
HpyF10VI GCNNNNNNNGC 8 cut(s) 54, 463, 590, 602, 781, 808, 982, 991
HpyF3I CTNAG 5 cut(s) 446, 612, 725, 858, 1191
HpySE526I ACGT 4 cut(s) 253, 372, 637, 1006
Hsp92I GRCGYC 3 cut(s) 431, 637, 887
Hsp92II CATG 3 cut(s) 187, 268, 1313
HspAI GCGC 4 cut(s) 55, 464, 688, 1169
Kpn2I TCCGGA 1 cut(s) 73
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
Kzo9I GATC 5 cut(s) 531, 861, 924, 944, 1257
LmnI GCTCC 6 cut(s) 297, 388, 721, 961, 1095, 1320
Lsp1109I GCAGC 2 cut(s) 1161, 1183
LweI GCATC 1 cut(s) 891
MaeI CTAG 2 cut(s) 996, 1296
MaeII ACGT 4 cut(s) 253, 372, 637, 1006
MaeIII GTNAC 1 cut(s) 1301
MalI GATC 5 cut(s) 533, 863, 926, 946, 1259
MboI GATC 5 cut(s) 531, 861, 924, 944, 1257
MboII GAAGA 6 cut(s) 279, 491, 889, 1085, 1134, 1137
MfeI CAATTG 2 cut(s) 905, 1178
MflI RGATCY 2 cut(s) 861, 944
MhlI GDGCHC 5 cut(s) 174, 378, 660, 767, 813
MluCI AATT 6 cut(s) 905, 1044, 1051, 1067, 1101, 1178
MluI ACGCGT 1 cut(s) 603
MlyI GAGTC 7 cut(s) 53, 575, 587, 604, 718, 788, 1323
MmeI TCCRAC 2 cut(s) 366, 893
MroI TCCGGA 1 cut(s) 73
MroNI GCCGGC 1 cut(s) 21
MseI TTAA 3 cut(s) 234, 1100, 1133
MslI CAYNNNNRTG 1 cut(s) 953
MspA1I CMGCKG 2 cut(s) 406, 1174
MspI CCGG 8 cut(s) 22, 74, 79, 99, 238, 309, 494, 628
MspR9I CCNGG 4 cut(s) 154, 283, 586, 1225
MunI CAATTG 2 cut(s) 905, 1178
Mva1269I GAATGC 1 cut(s) 1218
MvaI CCWGG 4 cut(s) 154, 283, 586, 1225
MvnI CGCG 3 cut(s) 57, 605, 690
MwoI GCNNNNNNNGC 8 cut(s) 54, 463, 590, 602, 781, 808, 982, 991
NaeI GCCGGC 1 cut(s) 23
NdeI CATATG 1 cut(s) 414
NdeII GATC 5 cut(s) 531, 861, 924, 944, 1257
NgoMIV GCCGGC 1 cut(s) 21
NlaIII CATG 3 cut(s) 187, 268, 1313
NlaIV GGNNCC 4 cut(s) 103, 632, 946, 1125
NotI GCGGCCGC 1 cut(s) 594
NsbI TGCGCA 1 cut(s) 1170
NspV TTCGAA 2 cut(s) 486, 1049
OliI CACNNNNGTG 1 cut(s) 953
PaeR7I CTCGAG 4 cut(s) 167, 422, 776, 1331
PctI GAATGC 1 cut(s) 1218
PdiI GCCGGC 1 cut(s) 23
PfeI GAWTC 4 cut(s) 488, 697, 703, 758
PflFI GACNNNGTC 2 cut(s) 430, 565
PflMI CCANNNNNTGG 1 cut(s) 51
PfoI TCCNGGA 1 cut(s) 152
PinAI ACCGGT 2 cut(s) 98, 237
PkrI GCNGC 8 cut(s) 405, 456, 595, 598, 804, 920, 1173, 1176
Ple19I CGATCG 1 cut(s) 534
PleI GAGTC 7 cut(s) 53, 574, 586, 604, 717, 787, 1323
PmaCI CACGTG 1 cut(s) 1007
PmlI CACGTG 1 cut(s) 1007
PpsI GAGTC 7 cut(s) 53, 574, 586, 604, 717, 787, 1323
Ppu21I YACGTR 3 cut(s) 254, 373, 1007
Psp6I CCWGG 4 cut(s) 152, 281, 584, 1223
PspCI CACGTG 1 cut(s) 1007
PspFI CCCAGC 1 cut(s) 44
PspGI CCWGG 4 cut(s) 152, 281, 584, 1223
PspN4I GGNNCC 4 cut(s) 103, 632, 946, 1125
PspPI GGNCC 4 cut(s) 24, 76, 101, 895
PspXI VCTCGAGB 3 cut(s) 167, 776, 1331
PstNI CAGNNNCTG 1 cut(s) 939
PsuI RGATCY 2 cut(s) 861, 944
PsyI GACNNNGTC 2 cut(s) 430, 565
PvuI CGATCG 1 cut(s) 534
PvuII CAGCTG 1 cut(s) 1174
RigI GGCCGGCC 1 cut(s) 25
RsaI GTAC 6 cut(s) 278, 371, 548, 557, 718, 1294
RsaNI GTAC 6 cut(s) 277, 370, 547, 556, 717, 1293
RseI CAYNNNNRTG 1 cut(s) 953
Rsr2I CGGWCCG 1 cut(s) 76
RsrII CGGWCCG 1 cut(s) 76
SalI GTCGAC 1 cut(s) 607
SaqAI TTAA 3 cut(s) 234, 1100, 1133
SatI GCNGC 8 cut(s) 404, 455, 594, 597, 803, 919, 1172, 1175
Sau3AI GATC 5 cut(s) 531, 861, 924, 944, 1257
Sau96I GGNCC 4 cut(s) 24, 76, 101, 895
SchI GAGTC 7 cut(s) 53, 575, 587, 604, 718, 788, 1323
ScrFI CCNGG 4 cut(s) 154, 283, 586, 1225
SduI GDGCHC 5 cut(s) 174, 378, 660, 767, 813
SfaNI GCATC 1 cut(s) 891
Sfr274I CTCGAG 4 cut(s) 167, 422, 776, 1331
SfuI TTCGAA 2 cut(s) 486, 1049
SinI GGWCC 3 cut(s) 76, 101, 895
SlaI CTCGAG 4 cut(s) 167, 422, 776, 1331
SmiMI CAYNNNNRTG 1 cut(s) 953
SmlI CTYRAG 5 cut(s) 167, 377, 422, 776, 1331
SmoI CTYRAG 5 cut(s) 167, 377, 422, 776, 1331
SpeI ACTAGT 1 cut(s) 1295
Sse9I AATT 6 cut(s) 905, 1044, 1051, 1067, 1101, 1178
SspMI CTAG 2 cut(s) 996, 1296
StyD4I CCNGG 4 cut(s) 152, 281, 584, 1223
StyI CCWWGG 1 cut(s) 995
TaaI ACNGT 2 cut(s) 895, 1307
TaiI ACGT 4 cut(s) 256, 375, 640, 1009
TaqII GACCGA 2 cut(s) 578, 632
TasI AATT 6 cut(s) 905, 1044, 1051, 1067, 1101, 1178
TatI WGTACW 4 cut(s) 276, 546, 555, 1292
TauI GCSGC 6 cut(s) 406, 457, 596, 599, 805, 921
TfiI GAWTC 4 cut(s) 488, 697, 703, 758
Tru1I TTAA 3 cut(s) 234, 1100, 1133
Tru9I TTAA 3 cut(s) 234, 1100, 1133
TscAI CASTG 1 cut(s) 849
TseI GCWGC 2 cut(s) 1171, 1174
TspDTI ATGAA 4 cut(s) 172, 803, 896, 1328
TspGWI ACGGA 4 cut(s) 310, 347, 734, 1049
TspRI CASTG 1 cut(s) 849
Tth111I GACNNNGTC 2 cut(s) 430, 565
Van91I CCANNNNNTGG 1 cut(s) 51
VpaK11BI GGWCC 3 cut(s) 76, 101, 895
XapI RAATTY 1 cut(s) 1051
XhoI CTCGAG 4 cut(s) 167, 422, 776, 1331
XmaJI CCTAGG 1 cut(s) 995
XmiI GTMKAC 1 cut(s) 608
XspI CTAG 2 cut(s) 996, 1296
ZraI GACGTC 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.