RchiOBHm_Chr5g0062881

Protein UPSTREAM OF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008643
Physical Location & Seq
Forward (+)
68692478 .. 68695756
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33905

Sequence Viewer

Length: 1326 bp
ATGGCTGTCACTTCCAGAGGACGACCAGCCTTTACCCACCTCCAGATCCCCAATAAATGGCGCGACTCTGAAACCAGCCCTGACCCGACCCACGAGCCCGACCCCAAACTCGCCATGACTCCCACTGCTGCTACAACTGCAGACAGAAAAGTCCCTGTTGTCTACTATCTCTCCAGAAACGGCCAGCTCGAGCACCCCCATTTCATGGAGGTCCCTCTCTCTTCTCCTCGCGGCCTCTTCCTCCGAGATGTGATTAACCGGCTCAACTTGCTCCGAGGCAAAGGCATGGCCACCATGTACTCCTGGTCTGCAAAACGGGGATACAAAACGGGGTTTGTTTGGCACGACTTGTCGGAGAACGACTTCATACACCCGTCGCACGGCAATGAGTACGTTTTGAAAGGCTCGGAGCTTCTCGACCCGCCGGTGAGCCCGATGGCGCTGCAATCGGCGTCGTCGAGGTCGCTTCGTCCGCCGCCGGAGGTGCATGATTCCGGCGTAGGTTACGACTCGCCGGTGATCGTGCGCCGGCCGAACCAGTCGTGGAGCTCCATCGACCTCAACGAGTACAAAGTCTACAAGACCGAGTCGGTCGGGGAGGCGGTGGCGGCAGACGCGTCGACGCAGACGGAGGACAAGCGGCACCGACGACGCGTCGTTCGGGAGGAACGCGGCGACGAGGTGCGAGAAGAGAAAGGTCAGAGTCAACAGGAGATGAGTAGCGGTCAAAGCACGGAGCTGGGCAGGGACGACATTTCGCCTCCGCCGTCGGATTCGAGCCCCGAAACGCTCGAGTCGTTGATGAAAGCCGACGGACGGCTGGTGCTTCAGGCGATGGAGGAGAATCAGAATCCGACGCCTGAGGTTGTGCCAGGTGGCAGAATGAAAGCGTCGTCGGTGCTCATGCAGTTGCTGTCGTGCGGGTCGATTTCGTTCAGGGACTGTGGGTCGACGGCGGTGAGGGACCAGCGGTTCTCGTTGATTGGGCAGTACAGGGCTAGGCTGCCCCGCGGAGCAGTGAATCAGGCTGTGGCCGAGAGGCCAGTTTCGAATTTTCCGGGGGTGAAATTGGAAGAGAAGGAGTATTTTAGCGGGAGCTTGATCGAGACCAAAAAAGAGGCCATTCCAGCTCTCAAAAGGTCTTGTTCTTACAATGCAGATAGGAGCACCCAGATGCAACTGGAGGAGACAGAGAAGGATGGAGTGAGAACAAAATGCATACCTAGAAAGCCAAAGTCAATGTTGGCCAACAAGAAAGAAACCAACTTCATCAATAATGGTAGTAGTAATGGGCAAGAAGGAGGGAGCAAAAGACTTGAAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF966

Protein Analysis

441

Amino Acids

49.04

Weight (kDa)

8.5

Isoelectric Point (pI)

56.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SOK PF06136 51 - 139 5.8e-49 SOSEKI protein DIX-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 149
AccB1I GGYRCC 1 cut(s) 642
AccB7I CCANNNNNTGG 2 cut(s) 57, 205
AccI GTMKAC 4 cut(s) 162, 576, 620, 950
AccII CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
AclWI GGATC 1 cut(s) 40
AcoI YGGCCR 5 cut(s) 181, 288, 530, 1032, 1245
AcsI RAATTY 1 cut(s) 1051
AcuI CTGAAG 1 cut(s) 812
AcyI GRCGYC 2 cut(s) 452, 857
AfaI GTAC 4 cut(s) 299, 392, 569, 992
AfiI CCNNNNNNNGG 4 cut(s) 57, 205, 380, 816
AflIII ACRYGT 2 cut(s) 615, 652
AgsI TTSAA 2 cut(s) 400, 1319
AhdI GACNNNNNGTC 2 cut(s) 653, 946
AjnI CCWGG 2 cut(s) 302, 871
AloI GAACNNNNNNTCC 2 cut(s) 956, 988
AluBI AGCT 6 cut(s) 187, 412, 549, 739, 1098, 1130
AluI AGCT 6 cut(s) 187, 412, 549, 739, 1098, 1130
Alw21I GWGCWC 4 cut(s) 195, 551, 903, 1169
Alw26I GTCTC 2 cut(s) 1100, 1181
AlwI GGATC 1 cut(s) 40
AlwNI CAGNNNCTG 2 cut(s) 913, 942
Ama87I CYCGRG 2 cut(s) 188, 791
AoxI GGCC 8 cut(s) 181, 232, 288, 530, 1032, 1040, 1119, 1245
ApeKI GCWGC 3 cut(s) 128, 442, 1003
ApoI RAATTY 1 cut(s) 1051
ArsI GACNNNNNNTTYG 2 cut(s) 642, 674
Asp700I GAANNNNTTC 1 cut(s) 362
AspLEI GCGC 3 cut(s) 63, 442, 528
AspS9I GGNCC 2 cut(s) 211, 964
AsuC2I CCSGG 1 cut(s) 1059
AsuHPI GGTGA 4 cut(s) 439, 529, 970, 1075
AsuII TTCGAA 1 cut(s) 1049
AvaI CYCGRG 2 cut(s) 188, 791
AvaII GGWCC 2 cut(s) 211, 964
AxyI CCTNAGG 1 cut(s) 861
BalI TGGCCA 2 cut(s) 290, 1247
BanI GGYRCC 1 cut(s) 642
BanII GRGCYC 4 cut(s) 99, 434, 551, 782
BauI CACGAG 1 cut(s) 92
Bbv12I GWGCWC 4 cut(s) 195, 551, 903, 1169
BbvI GCAGC 3 cut(s) 115, 429, 990
BccI CCATC 4 cut(s) 430, 560, 829, 1193
BceAI ACGGC 5 cut(s) 196, 397, 751, 833, 969
BcgI CGANNNNNNTGC 4 cut(s) 424, 458, 600, 634
BciT130I CCWGG 2 cut(s) 304, 873
BciVI GTATCC 1 cut(s) 314
BcnI CCSGG 1 cut(s) 1059
BcoDI GTCTC 2 cut(s) 1100, 1181
BfaI CTAG 2 cut(s) 999, 1224
BfmI CTRYAG 1 cut(s) 138
BfoI RGCGCY 1 cut(s) 443
BfuI GTATCC 1 cut(s) 314
BisI GCNGC 8 cut(s) 129, 232, 443, 476, 609, 641, 673, 1004
BlsI GCNGC 8 cut(s) 130, 233, 444, 477, 610, 642, 674, 1005
Bme1390I CCNGG 3 cut(s) 304, 873, 1059
Bme18I GGWCC 2 cut(s) 211, 964
BmeRI GACNNNNNGTC 2 cut(s) 653, 946
BmeT110I CYCGRG 2 cut(s) 188, 791
BmgT120I GGNCC 2 cut(s) 211, 964
BmiI GGNNCC 3 cut(s) 213, 644, 965
BmrFI CCNGG 3 cut(s) 304, 873, 1059
BmsI GCATC 1 cut(s) 1164
BpmI CTGGAG 3 cut(s) 26, 157, 1202
Bpu14I TTCGAA 1 cut(s) 1049
BpuMI CCSGG 1 cut(s) 1059
BsaHI GRCGYC 2 cut(s) 452, 857
BsaI GGTCTC 1 cut(s) 1100
BsaJI CCNNGG 3 cut(s) 274, 1009, 1058
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 4 cut(s) 57, 205, 380, 816
Bse118I RCCGGY 4 cut(s) 258, 424, 514, 528
Bse1I ACTGG 3 cut(s) 538, 1043, 1185
Bse21I CCTNAGG 1 cut(s) 861
Bse3DI GCAATG 1 cut(s) 391
BseBI CCWGG 2 cut(s) 304, 873
BseDI CCNNGG 3 cut(s) 274, 1009, 1058
BseGI GGATG 1 cut(s) 1204
BseLI CCNNNNNNNGG 4 cut(s) 57, 205, 380, 816
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 1 cut(s) 852
BseNI ACTGG 3 cut(s) 538, 1043, 1185
BseRI GAGGAG 3 cut(s) 216, 854, 1199
BseX3I CGGCCG 1 cut(s) 530
BseXI GCAGC 3 cut(s) 115, 429, 990
BseYI CCCAGC 1 cut(s) 739
Bsh1236I CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
Bsh1285I CGRYCG 2 cut(s) 533, 594
BshFI GGCC 8 cut(s) 183, 234, 290, 532, 1034, 1042, 1121, 1247
BshNI GGYRCC 1 cut(s) 642
BsiEI CGRYCG 2 cut(s) 533, 594
BsiHKAI GWGCWC 4 cut(s) 195, 551, 903, 1169
BsiHKCI CYCGRG 2 cut(s) 188, 791
BsiSI CCGG 7 cut(s) 259, 425, 479, 495, 515, 529, 1058
BslFI GGGAC 5 cut(s) 137, 197, 761, 953, 977
BslI CCNNNNNNNGG 4 cut(s) 57, 205, 380, 816
BsmAI GTCTC 2 cut(s) 1100, 1181
BsmFI GGGAC 5 cut(s) 137, 197, 761, 953, 977
BsnI GGCC 8 cut(s) 183, 234, 290, 532, 1034, 1042, 1121, 1247
Bso31I GGTCTC 1 cut(s) 1100
BsoBI CYCGRG 2 cut(s) 188, 791
Bsp119I TTCGAA 1 cut(s) 1049
Bsp1286I GDGCHC 7 cut(s) 99, 195, 434, 551, 782, 903, 1169
Bsp143I GATC 3 cut(s) 45, 519, 1101
BspANI GGCC 8 cut(s) 183, 234, 290, 532, 1034, 1042, 1121, 1247
BspCNI CTCAG 1 cut(s) 853
BspFNI CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
BspLI GGNNCC 3 cut(s) 213, 644, 965
BspMAI CTGCAG 1 cut(s) 142
BspPI GGATC 1 cut(s) 40
BspT104I TTCGAA 1 cut(s) 1049
BspT107I GGYRCC 1 cut(s) 642
BspTNI GGTCTC 1 cut(s) 1100
BsrDI GCAATG 1 cut(s) 391
BsrFI RCCGGY 4 cut(s) 258, 424, 514, 528
BsrI ACTGG 3 cut(s) 538, 1043, 1185
BssAI RCCGGY 4 cut(s) 258, 424, 514, 528
BssECI CCNNGG 3 cut(s) 274, 1009, 1058
BssMI GATC 3 cut(s) 45, 519, 1101
BssNI GRCGYC 2 cut(s) 452, 857
BssSI CACGAG 1 cut(s) 92
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 2 cut(s) 304, 873
Bst4CI ACNGT 1 cut(s) 944
Bst6I CTCTTC 4 cut(s) 226, 242, 684, 1068
BstACI GRCGYC 2 cut(s) 452, 857
BstBI TTCGAA 1 cut(s) 1049
BstC8I GCNNGC 2 cut(s) 185, 530
BstDEI CTNAG 1 cut(s) 861
BstDSI CCRYGG 1 cut(s) 1009
BstF5I GGATG 1 cut(s) 1204
BstFNI CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
BstH2I RGCGCY 1 cut(s) 443
BstHHI GCGC 3 cut(s) 63, 442, 528
BstKTI GATC 3 cut(s) 48, 522, 1104
BstMAI GTCTC 2 cut(s) 1100, 1181
BstMBI GATC 3 cut(s) 45, 519, 1101
BstMCI CGRYCG 2 cut(s) 533, 594
BstMWI GCNNNNNNNGC 8 cut(s) 137, 268, 472, 484, 608, 614, 729, 1127
BstNI CCWGG 2 cut(s) 304, 873
BstSCI CCNGG 3 cut(s) 302, 871, 1057
BstSFI CTRYAG 1 cut(s) 138
BstUI CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
BstV1I GCAGC 3 cut(s) 115, 429, 990
BstX2I RGATCY 1 cut(s) 45
BstYI RGATCY 1 cut(s) 45
BstZI CGGCCG 1 cut(s) 530
Bsu36I CCTNAGG 1 cut(s) 861
BsuI GTATCC 1 cut(s) 314
BsuRI GGCC 8 cut(s) 183, 234, 290, 532, 1034, 1042, 1121, 1247
BtgI CCRYGG 1 cut(s) 1009
BtgZI GCGATG 1 cut(s) 848
BtsCI GGATG 1 cut(s) 1204
BtsI GCAGTG 2 cut(s) 123, 1023
BtsIMutI CAGTG 2 cut(s) 123, 1023
Cac8I GCNNGC 2 cut(s) 185, 530
CaiI CAGNNNCTG 2 cut(s) 913, 942
CfoI GCGC 3 cut(s) 63, 442, 528
Cfr10I RCCGGY 4 cut(s) 258, 424, 514, 528
Cfr13I GGNCC 2 cut(s) 211, 964
Cfr42I CCGCGG 1 cut(s) 1012
CseI GACGC 8 cut(s) 441, 606, 623, 631, 643, 660, 865, 879
Csp6I GTAC 4 cut(s) 298, 391, 568, 991
CviAII CATG 6 cut(s) 115, 205, 286, 295, 488, 904
CviQI GTAC 4 cut(s) 298, 391, 568, 991
DdeI CTNAG 1 cut(s) 861
DpnI GATC 3 cut(s) 47, 521, 1103
DpnII GATC 3 cut(s) 45, 519, 1101
DrdI GACNNNNNNGTC 1 cut(s) 149
DriI GACNNNNNGTC 2 cut(s) 653, 946
DseDI GACNNNNNNGTC 1 cut(s) 149
EaeI YGGCCR 5 cut(s) 181, 288, 530, 1032, 1245
EagI CGGCCG 1 cut(s) 530
Eam1104I CTCTTC 4 cut(s) 226, 242, 684, 1068
Eam1105I GACNNNNNGTC 2 cut(s) 653, 946
EarI CTCTTC 4 cut(s) 226, 242, 684, 1068
EciI GGCGGA 2 cut(s) 462, 753
Ecl136II GAGCTC 1 cut(s) 549
EclXI CGGCCG 1 cut(s) 530
Eco24I GRGCYC 4 cut(s) 99, 434, 551, 782
Eco31I GGTCTC 1 cut(s) 1100
Eco47I GGWCC 2 cut(s) 211, 964
Eco52I CGGCCG 1 cut(s) 530
Eco53kI GAGCTC 1 cut(s) 549
Eco57I CTGAAG 1 cut(s) 812
Eco81I CCTNAGG 1 cut(s) 861
Eco88I CYCGRG 2 cut(s) 188, 791
EcoICRI GAGCTC 1 cut(s) 549
EcoO109I RGGNCCY 1 cut(s) 211
EcoRII CCWGG 2 cut(s) 302, 871
EcoT22I ATGCAT 1 cut(s) 1220
EcoT38I GRGCYC 4 cut(s) 99, 434, 551, 782
FaeI CATG 6 cut(s) 118, 208, 289, 298, 491, 907
FaiI YATR 9 cut(s) 116, 206, 287, 296, 368, 489, 905, 1220, 1324
FaqI GGGAC 5 cut(s) 137, 197, 761, 953, 977
FatI CATG 6 cut(s) 114, 204, 285, 294, 487, 903
FauI CCCGC 4 cut(s) 429, 914, 1016, 1085
FblI GTMKAC 4 cut(s) 162, 576, 620, 950
Fnu4HI GCNGC 8 cut(s) 129, 232, 443, 476, 609, 641, 673, 1004
FokI GGATG 1 cut(s) 1211
FriOI GRGCYC 4 cut(s) 99, 434, 551, 782
Fsp4HI GCNGC 8 cut(s) 129, 232, 443, 476, 609, 641, 673, 1004
FspBI CTAG 2 cut(s) 999, 1224
GlaI GCGC 3 cut(s) 62, 441, 527
GluI GCNGC 8 cut(s) 129, 232, 443, 476, 609, 641, 673, 1004
GsaI CCCAGC 1 cut(s) 743
GsuI CTGGAG 3 cut(s) 26, 157, 1202
HaeII RGCGCY 1 cut(s) 443
HaeIII GGCC 8 cut(s) 183, 234, 290, 532, 1034, 1042, 1121, 1247
HapII CCGG 7 cut(s) 259, 425, 479, 495, 515, 529, 1058
HgaI GACGC 8 cut(s) 441, 606, 623, 631, 643, 660, 865, 879
HhaI GCGC 3 cut(s) 63, 442, 528
Hin1I GRCGYC 2 cut(s) 452, 857
Hin1II CATG 6 cut(s) 118, 208, 289, 298, 491, 907
Hin6I GCGC 3 cut(s) 61, 440, 526
HinP1I GCGC 3 cut(s) 61, 440, 526
HincII GTYRAC 3 cut(s) 621, 707, 951
HindII GTYRAC 3 cut(s) 621, 707, 951
HpaII CCGG 7 cut(s) 259, 425, 479, 495, 515, 529, 1058
HphI GGTGA 4 cut(s) 439, 529, 970, 1075
Hpy166II GTNNAC 5 cut(s) 163, 577, 621, 707, 951
Hpy188I TCNGA 9 cut(s) 70, 245, 275, 355, 409, 702, 772, 849, 855
Hpy188III TCNNGA 6 cut(s) 15, 43, 174, 416, 662, 1105
Hpy8I GTNNAC 5 cut(s) 163, 577, 621, 707, 951
HpyAV CCTTC 3 cut(s) 1072, 1189, 1292
HpyCH4III ACNGT 1 cut(s) 944
HpyCH4IV ACGT 1 cut(s) 393
HpyCH4V TGCA 8 cut(s) 140, 311, 445, 487, 907, 1157, 1177, 1218
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 268, 472, 484, 608, 614, 729, 1127
HpyF3I CTNAG 1 cut(s) 861
HpySE526I ACGT 1 cut(s) 393
Hsp92I GRCGYC 2 cut(s) 452, 857
Hsp92II CATG 6 cut(s) 118, 208, 289, 298, 491, 907
HspAI GCGC 3 cut(s) 61, 440, 526
KroI GCCGGC 1 cut(s) 528
KroNI GCCGGC 1 cut(s) 530
KspI CCGCGG 1 cut(s) 1012
Kzo9I GATC 3 cut(s) 45, 519, 1101
LmnI GCTCC 9 cut(s) 276, 409, 546, 554, 736, 1013, 1095, 1164, 1305
Lsp1109I GCAGC 3 cut(s) 115, 429, 990
LweI GCATC 1 cut(s) 1164
MaeI CTAG 2 cut(s) 999, 1224
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 2 cut(s) 7, 503
MalI GATC 3 cut(s) 47, 521, 1103
MboI GATC 3 cut(s) 45, 519, 1101
MboII GAAGA 4 cut(s) 213, 229, 701, 1085
MflI RGATCY 1 cut(s) 45
MhlI GDGCHC 7 cut(s) 99, 195, 434, 551, 782, 903, 1169
MlsI TGGCCA 2 cut(s) 290, 1247
MluCI AATT 2 cut(s) 1051, 1067
MluI ACGCGT 2 cut(s) 615, 652
MluNI TGGCCA 2 cut(s) 290, 1247
MlyI GAGTC 6 cut(s) 59, 112, 503, 596, 712, 803
MmeI TCCRAC 3 cut(s) 333, 750, 878
Mox20I TGGCCA 2 cut(s) 290, 1247
Mph1103I ATGCAT 1 cut(s) 1220
MroNI GCCGGC 1 cut(s) 528
MroXI GAANNNNTTC 1 cut(s) 362
MscI TGGCCA 2 cut(s) 290, 1247
MseI TTAA 1 cut(s) 255
MslI CAYNNNNRTG 2 cut(s) 384, 1172
Msp20I TGGCCA 2 cut(s) 290, 1247
MspA1I CMGCKG 2 cut(s) 970, 1011
MspI CCGG 7 cut(s) 259, 425, 479, 495, 515, 529, 1058
MspR9I CCNGG 3 cut(s) 304, 873, 1059
MvaI CCWGG 2 cut(s) 304, 873
MvnI CGCG 6 cut(s) 63, 231, 617, 654, 672, 1011
MwoI GCNNNNNNNGC 8 cut(s) 137, 268, 472, 484, 608, 614, 729, 1127
NaeI GCCGGC 1 cut(s) 530
NciI CCSGG 1 cut(s) 1059
NdeII GATC 3 cut(s) 45, 519, 1101
NgoMIV GCCGGC 1 cut(s) 528
NlaIII CATG 6 cut(s) 118, 208, 289, 298, 491, 907
NlaIV GGNNCC 3 cut(s) 213, 644, 965
NmeAIII GCCGAG 1 cut(s) 1060
NmuCI GTSAC 1 cut(s) 7
NsiI ATGCAT 1 cut(s) 1220
NspV TTCGAA 1 cut(s) 1049
PaeR7I CTCGAG 2 cut(s) 188, 791
PcsI WCGNNNNNNNCGW 6 cut(s) 186, 455, 561, 764, 794, 923
PdiI GCCGGC 1 cut(s) 530
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 5 cut(s) 491, 773, 844, 850, 1021
PflFI GACNNNGTC 1 cut(s) 586
PflMI CCANNNNNTGG 2 cut(s) 57, 205
PkrI GCNGC 8 cut(s) 130, 233, 444, 477, 610, 642, 674, 1005
PleI GAGTC 6 cut(s) 59, 112, 503, 595, 711, 802
PpsI GAGTC 6 cut(s) 59, 112, 503, 595, 711, 802
PpuMI RGGWCCY 1 cut(s) 211
Psp124BI GAGCTC 1 cut(s) 551
Psp5II RGGWCCY 1 cut(s) 211
Psp6I CCWGG 2 cut(s) 302, 871
PspFI CCCAGC 1 cut(s) 739
PspGI CCWGG 2 cut(s) 302, 871
PspN4I GGNNCC 3 cut(s) 213, 644, 965
PspPI GGNCC 2 cut(s) 211, 964
PspPPI RGGWCCY 1 cut(s) 211
PspXI VCTCGAGB 2 cut(s) 188, 791
PstI CTGCAG 1 cut(s) 142
PstNI CAGNNNCTG 2 cut(s) 913, 942
PsuI RGATCY 1 cut(s) 45
PsyI GACNNNGTC 1 cut(s) 586
RsaI GTAC 4 cut(s) 299, 392, 569, 992
RsaNI GTAC 4 cut(s) 298, 391, 568, 991
RseI CAYNNNNRTG 2 cut(s) 384, 1172
SacI GAGCTC 1 cut(s) 551
SacII CCGCGG 1 cut(s) 1012
SalI GTCGAC 2 cut(s) 619, 949
SaqAI TTAA 1 cut(s) 255
SatI GCNGC 8 cut(s) 129, 232, 443, 476, 609, 641, 673, 1004
Sau3AI GATC 3 cut(s) 45, 519, 1101
Sau96I GGNCC 2 cut(s) 211, 964
SchI GAGTC 6 cut(s) 59, 112, 503, 596, 712, 803
ScrFI CCNGG 3 cut(s) 304, 873, 1059
SduI GDGCHC 7 cut(s) 99, 195, 434, 551, 782, 903, 1169
SfaNI GCATC 1 cut(s) 1164
SfcI CTRYAG 1 cut(s) 138
Sfr274I CTCGAG 2 cut(s) 188, 791
Sfr303I CCGCGG 1 cut(s) 1012
SfuI TTCGAA 1 cut(s) 1049
SgrAI CRCCGGYG 2 cut(s) 424, 514
SgrBI CCGCGG 1 cut(s) 1012
SgrDI CGTCGACG 1 cut(s) 619
SinI GGWCC 2 cut(s) 211, 964
SlaI CTCGAG 2 cut(s) 188, 791
SmiMI CAYNNNNRTG 2 cut(s) 384, 1172
SmlI CTYRAG 2 cut(s) 188, 791
SmoI CTYRAG 2 cut(s) 188, 791
Sse9I AATT 2 cut(s) 1051, 1067
SspMI CTAG 2 cut(s) 999, 1224
SstI GAGCTC 1 cut(s) 551
StyD4I CCNGG 3 cut(s) 302, 871, 1057
TaaI ACNGT 1 cut(s) 944
TaiI ACGT 1 cut(s) 396
TaqII GACCGA 2 cut(s) 580, 599
TasI AATT 2 cut(s) 1051, 1067
TatI WGTACW 3 cut(s) 297, 567, 990
TauI GCSGC 5 cut(s) 234, 478, 611, 643, 675
TfiI GAWTC 5 cut(s) 491, 773, 844, 850, 1021
Tru1I TTAA 1 cut(s) 255
Tru9I TTAA 1 cut(s) 255
TscAI CASTG 2 cut(s) 130, 1023
TseFI GTSAC 1 cut(s) 7
TseI GCWGC 3 cut(s) 128, 442, 1003
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 5 cut(s) 193, 355, 818, 899, 1258
TspGWI ACGGA 3 cut(s) 644, 749, 828
TspRI CASTG 2 cut(s) 130, 1023
Tth111I GACNNNGTC 1 cut(s) 586
Van91I CCANNNNNTGG 2 cut(s) 57, 205
VpaK11BI GGWCC 2 cut(s) 211, 964
XapI RAATTY 1 cut(s) 1051
XhoI CTCGAG 2 cut(s) 188, 791
XmiI GTMKAC 4 cut(s) 162, 576, 620, 950
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 2 cut(s) 999, 1224
Zsp2I ATGCAT 1 cut(s) 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.