Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010666

Physical Location & Seq

Genomic Coordinates Reverse (-)

12873790 .. 12878495

Gene Structure 4706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1139100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGGTTATGGTAATTCAAAATCTATAAGATTTCAAGATGATGTTGAACTAGCAAAGCTACCTTCAGTCAATGAGGTTGGTGTGGTCAAGCTTAAGTATAAGATTGATGGGGGAGAAGTAGCAGAGCCCTTCGAAAAGGAGGTGTCCCGGAATACTGGAAAATCGTTAAAGGCTAAAGTTCTGTCCAGAGTCTTTTCCGAGGACTATGAGAGAGTGCAGAAGAAAATATTAGATCCTCGAGGACAGACTGTTCGCCGTTGGAACAAGATTTTCTTAGTAACTTGTTTAGTTTCTTTGTTCGTGGACCCTCTATTCTTTTACTTGCCATCGGCGAGAGATGAATTCTGCATTAGTATTGGAGAACCACTTGAAGTTGTTCTAACATTTGTTCGATCAGTGGCTGATGTTTTTTACATAATCCAAATTTTTATTAACTTTCGCAAAGCTTATATTGCACCTTCCTCTCGTGTATTTGGGAGAGGAGAGCTTGTAATAGAATCTTCAAAGATCGCATTGAGATACCTACGCCTGGATTTCTGGATAGACCTCATTGCTGCGCTGCCCCTTCCTCAGGTCCTGATTTGGATTGTAATCCCAACCCTTAGCGGTTCGACAGTGACAAACACAAAAAACGTCCTTCGATTCATCATAATCTTTCAATACATACCAAGGCTCTTTCTTATATATCCGCTCTCATCACAAATAGTTAAGGCCACTGGTGTTGTGACAGAGACAGCTTGGGCAGGGGCTGCATATAATCTGATGCTATACATGTTGGCAAGTCATGTTTTAGGAGCTTGTTGGTACCTTCTTTCAATTGAGCGGCAAGAATCTTGTTGGAGAAGTGTTTGTGGTCTTGCGAATACGTCTTGCAGATATGATTACTTTGACTGTCGTTGGGCTCAAGACCCTAACAGGAAGTCCTGGTACCAGTCGAGTAATGTCACAAATCTCTGTATTCCAGATAATTATCAGTTCGGTATTTATGGTGACGCGGTGACATATGATGTTACAACCTCGTCGTTCTTCAACAAATACTTTTACTGTCTCTGGTGGGGTCTAAGAAACCTCAGTTCTTTGGGACAAAATCTTTCAACAAGTACTTATGTTGGAGAGATAATGTTTGCTATAATCATCGCTACTCTTGGTCTGGTTCTCTTTGCATTGCTGATTGGTAATATGCAAACATACCTCCAATCCACAACTGTGAGACTAGAAGAGTGGAGGATAAAGAGAACTGACACAGAACAATGGATGCGTCATAGGCAACTGCCTCCGGAGCTAAGACAGTCTGTACGGAAGTATGATCAATACAAGTGGTTGGCTACTCGAGGAGTTGATGAGGAAGCTCTTCTCAATGGCCTACCTATGGATCTTCGAAGGGACATCAAGCGGCACCTTTGCCTTGACCTTGTTCGACGAGTTCCTTTGTTCGATCAAATGGATGAAAGGATGCTGGATGCAATATGTGAGAGGCTTAAACCTGCCTTGTGCACCGAAGGCACATTTCTAGTCCGCGAAGGAGACCCTGTCAATGAAATGCTCTTCATAATTCGAGGCCACCTTGATTCTTACACCACAAATGGTGGTCGAACCGGATTTTTCAACTCATGCGGTATTGGTCCGGGTGACTTCTGTGGTGAGGAACTGCTGACATGGGCTTTGGACCCTCGTCCAAGTGTCATCCTGCCATCTTCAACGCGCACAGTCAAATCCATCTCTGAAGTAGAAGCATTTGCTCTAGTAGCAGAGGACTTGAAATTCGTAGCATCCCAGTTCAGAAGACTTCACAGCAAGCAACTTAGACACAAGTTCCGGTTCTATTCACATCAATGGAGATTATGGTCTGCATGTTTCATACAGGCAGCATGGCGTCGATGTAAGAAAAGAAGGGAAGCAGCCGAACTCAAGGCTAAAGAAAACCACACAGAAAATGAGCCTGCAAAACTTCCACCTGTGTCGGACTTGGTTACCTATGCTGCAAGGCTCGCTGCAAGCACCAGACGTGGTGCCAATAAGCATTCTGGGGTCGTTGGCTCATTGCAGAAGCCAGCGGAGCCTGATTTTTCAGTTGAGGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0008150 GO:0008324 GO:0009877 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0031965 GO:0031967 GO:0031975 GO:0034220 GO:0036377 GO:0042391 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

695

Amino Acids

79.66

Weight (kDa)

8.97

Isoelectric Point (pI)

47.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	86 - 404	1.1e-18	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28260 AT2G28260
fragaria_vesca	FvH4_3g31830 FvH4_3g31830 FvH4_3g31830
malus_domestica	MD03G1120600.v1.1 MD11G1139100.v1.1
prunus_persica	Prupe.6G104000_v2.0.a1 Prupe.6G104000_v2.0.a1
pyrus_communis	pycom11g11500
rosa_chinensis	RchiOBHm_Chr5g0058601
rosa_laevigata	RLG00000035235
rosa_multiflora	Rmu_sc0000367.1_g000155
rosa_roxburghii	Rroxscaffold_1G00021860
rosa_rugosa	Rorug05G0316200 Rorug05G0316300 Rorug05G0316400
rosa_samantha	Rh5AG382400 Rh5BG394200
rosa_wichuraiana	Rw5G036010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	237
Acc36I	ACCTGC	1 cut(s)	1492
Acc65I	GGTACC	2 cut(s)	804, 927
AccB1I	GGYRCC	4 cut(s)	804, 927, 1395, 2009
AccBSI	CCGCTC	2 cut(s)	691, 823
AccII	CGCG	3 cut(s)	995, 1518, 1702
AccIII	TCCGGA	1 cut(s)	1276
AciI	CCGC	8 cut(s)	606, 689, 823, 995, 1393, 1516, 1614, 2054
AclWI	GGATC	2 cut(s)	227, 1380
AcsI	RAATTY	3 cut(s)	341, 423, 1760
AcuI	CTGAAG	2 cut(s)	48, 1743
AcyI	GRCGYC	1 cut(s)	1873
AfaI	GTAC	4 cut(s)	806, 929, 1102, 1296
AfiI	CCNNNNNNNGG	3 cut(s)	529, 571, 1369
AflII	CTTAAG	1 cut(s)	92
AflIII	ACRYGT	1 cut(s)	771
AjiI	CACGTC	1 cut(s)	2006
AjnI	CCWGG	2 cut(s)	528, 923
AleI	CACNNNNGTG	1 cut(s)	1205
AloI	GAACNNNNNNTCC	2 cut(s)	234, 266
AluBI	AGCT	8 cut(s)	58, 91, 446, 487, 737, 797, 1282, 1349
AluI	AGCT	8 cut(s)	58, 91, 446, 487, 737, 797, 1282, 1349
Alw21I	GWGCWC	1 cut(s)	1496
Alw26I	GTCTC	4 cut(s)	725, 1052, 1204, 1518
Alw44I	GTGCAC	1 cut(s)	1492
AlwI	GGATC	2 cut(s)	227, 1380
AlwNI	CAGNNNCTG	3 cut(s)	401, 577, 749
Ama87I	CYCGRG	2 cut(s)	237, 1329
Aor13HI	TCCGGA	1 cut(s)	1276
AoxI	GGCC	3 cut(s)	711, 1360, 1558
ApaLI	GTGCAC	1 cut(s)	1492
ApeKI	GCWGC	7 cut(s)	554, 559, 749, 1865, 1898, 1979, 1991
ApoI	RAATTY	3 cut(s)	341, 423, 1760
ArsI	GACNNNNNNTTYG	6 cut(s)	234, 266, 1645, 1677, 1745, 1777
Asp700I	GAANNNNTTC	2 cut(s)	375, 1350
Asp718I	GGTACC	2 cut(s)	804, 927
AspLEI	GCGC	2 cut(s)	559, 1704
AspS9I	GGNCC	4 cut(s)	304, 574, 1622, 1666
AsuC2I	CCSGG	2 cut(s)	148, 1626
AsuHPI	GGTGA	4 cut(s)	1001, 1009, 1640, 1652
AsuII	TTCGAA	2 cut(s)	132, 1378
AvaI	CYCGRG	2 cut(s)	237, 1329
AvaII	GGWCC	4 cut(s)	304, 574, 1622, 1666
AxyI	CCTNAGG	1 cut(s)	570
BaeGI	GKGCMC	1 cut(s)	1496
BanI	GGYRCC	4 cut(s)	804, 927, 1395, 2009
BanII	GRGCYC	2 cut(s)	129, 904
BarI	GAAGNNNNNNTAC	2 cut(s)	911, 943
BauI	CACGAG	1 cut(s)	465
BbsI	GAAGAC	1 cut(s)	1789
Bbv12I	GWGCWC	1 cut(s)	1496
BbvI	GCAGC	7 cut(s)	541, 546, 736, 1877, 1910, 1966, 1978
BccI	CCATC	4 cut(s)	101, 334, 1699, 1724
BceAI	ACGGC	1 cut(s)	240
BciT130I	CCWGG	2 cut(s)	530, 925
BclI	TGATCA	1 cut(s)	1306
BcnI	CCSGG	2 cut(s)	148, 1626
BcoDI	GTCTC	4 cut(s)	725, 1052, 1204, 1518
BfaI	CTAG	4 cut(s)	50, 1214, 1511, 1742
BfrI	CTTAAG	1 cut(s)	92
BfuAI	ACCTGC	1 cut(s)	1492
BisI	GCNGC	9 cut(s)	555, 560, 750, 824, 1394, 1866, 1899, 1980, 1992
BlsI	GCNGC	9 cut(s)	556, 561, 751, 825, 1395, 1867, 1900, 1981, 1993
BmcAI	AGTACT	1 cut(s)	1102
Bme1390I	CCNGG	4 cut(s)	148, 530, 925, 1626
Bme18I	GGWCC	4 cut(s)	304, 574, 1622, 1666
BmeT110I	CYCGRG	2 cut(s)	237, 1329
BmgBI	CACGTC	1 cut(s)	2006
BmgT120I	GGNCC	4 cut(s)	304, 574, 1622, 1666
BmiI	GGNNCC	7 cut(s)	306, 806, 929, 1397, 1668, 2011, 2058
BmrFI	CCNGG	4 cut(s)	148, 530, 925, 1626
BmrI	ACTGGG	1 cut(s)	1768
BmsI	GCATC	5 cut(s)	753, 1245, 1443, 1450, 1778
BmuI	ACTGGG	1 cut(s)	1768
BoxI	GACNNNNGTC	1 cut(s)	1671
BpiI	GAAGAC	1 cut(s)	1789
Bpu10I	CCTNAGC	1 cut(s)	602
Bpu14I	TTCGAA	2 cut(s)	132, 1378
BpuEI	CTTGAG	2 cut(s)	888, 1892
BpuMI	CCSGG	2 cut(s)	148, 1626
BsaBI	GATNNNNATC	2 cut(s)	590, 969
BsaHI	GRCGYC	1 cut(s)	1873
BsaI	GGTCTC	1 cut(s)	1518
BsaJI	CCNNGG	2 cut(s)	198, 668
BsaWI	WCCGGW	3 cut(s)	1276, 1595, 1815
BsaXI	ACNNNNNCTCC	4 cut(s)	474, 504, 1515, 1545
Bsc4I	CCNNNNNNNGG	3 cut(s)	529, 571, 1369
Bse1I	ACTGG	4 cut(s)	160, 721, 931, 1774
Bse21I	CCTNAGG	1 cut(s)	570
Bse3DI	GCAATG	3 cut(s)	549, 1163, 2039
Bse8I	GATNNNNATC	2 cut(s)	590, 969
BseAI	TCCGGA	1 cut(s)	1276
BseBI	CCWGG	2 cut(s)	530, 925
BseDI	CCNNGG	2 cut(s)	198, 668
BseGI	GGATG	6 cut(s)	1260, 1450, 1458, 1465, 1683, 1769
BseJI	GATNNNNATC	2 cut(s)	590, 969
BseLI	CCNNNNNNNGG	3 cut(s)	529, 571, 1369
BseMI	GCAATG	3 cut(s)	549, 1163, 2039
BseMII	CTCAG	2 cut(s)	584, 1084
BseNI	ACTGG	4 cut(s)	160, 721, 931, 1774
BseRI	GAGGAG	2 cut(s)	495, 1347
BseSI	GKGCMC	1 cut(s)	1496
BseXI	GCAGC	7 cut(s)	541, 546, 736, 1877, 1910, 1966, 1978
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	3 cut(s)	995, 1518, 1702
BshFI	GGCC	3 cut(s)	713, 1362, 1560
BshNI	GGYRCC	4 cut(s)	804, 927, 1395, 2009
BsiHKAI	GWGCWC	1 cut(s)	1496
BsiHKCI	CYCGRG	2 cut(s)	237, 1329
BsiSI	CCGG	5 cut(s)	148, 1277, 1596, 1625, 1816
BslFI	GGGAC	3 cut(s)	130, 1095, 1397
BslI	CCNNNNNNNGG	3 cut(s)	529, 571, 1369
BsmAI	GTCTC	4 cut(s)	725, 1052, 1204, 1518
BsmFI	GGGAC	3 cut(s)	130, 1095, 1397
BsmI	GAATGC	1 cut(s)	2020
BsnI	GGCC	3 cut(s)	713, 1362, 1560
Bso31I	GGTCTC	1 cut(s)	1518
BsoBI	CYCGRG	2 cut(s)	237, 1329
Bsp119I	TTCGAA	2 cut(s)	132, 1378
Bsp1286I	GDGCHC	3 cut(s)	129, 904, 1496
Bsp13I	TCCGGA	1 cut(s)	1276
Bsp143I	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
BspACI	CCGC	8 cut(s)	606, 689, 823, 995, 1393, 1516, 1614, 2054
BspANI	GGCC	3 cut(s)	713, 1362, 1560
BspCNI	CTCAG	2 cut(s)	583, 1083
BspEI	TCCGGA	1 cut(s)	1276
BspFNI	CGCG	3 cut(s)	995, 1518, 1702
BspLI	GGNNCC	7 cut(s)	306, 806, 929, 1397, 1668, 2011, 2058
BspMI	ACCTGC	1 cut(s)	1492
BspPI	GGATC	2 cut(s)	227, 1380
BspQI	GCTCTTC	2 cut(s)	1356, 1550
BspT104I	TTCGAA	2 cut(s)	132, 1378
BspT107I	GGYRCC	4 cut(s)	804, 927, 1395, 2009
BspTI	CTTAAG	1 cut(s)	92
BspTNI	GGTCTC	1 cut(s)	1518
BsrBI	CCGCTC	2 cut(s)	691, 823
BsrDI	GCAATG	3 cut(s)	549, 1163, 2039
BsrI	ACTGG	4 cut(s)	160, 721, 931, 1774
BssECI	CCNNGG	2 cut(s)	198, 668
BssMI	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
BssNI	GRCGYC	1 cut(s)	1873
BssSI	CACGAG	1 cut(s)	465
BssT1I	CCWWGG	1 cut(s)	668
Bst2BI	CACGAG	1 cut(s)	465
Bst2UI	CCWGG	2 cut(s)	530, 925
Bst4CI	ACNGT	7 cut(s)	250, 616, 893, 1046, 1207, 1290, 1708
Bst6I	CTCTTC	3 cut(s)	1212, 1356, 1550
BstACI	GRCGYC	1 cut(s)	1873
BstAFI	CTTAAG	1 cut(s)	92
BstAPI	GCANNNNNTGC	1 cut(s)	749
BstBI	TTCGAA	2 cut(s)	132, 1378
BstC8I	GCNNGC	5 cut(s)	1796, 1941, 1989, 1996, 2052
BstDEI	CTNAG	7 cut(s)	274, 570, 602, 1061, 1070, 1283, 1802
BstEII	GGTNACC	1 cut(s)	1969
BstENI	CCTNNNNNAGG	1 cut(s)	569
BstF5I	GGATG	6 cut(s)	1260, 1450, 1458, 1465, 1683, 1769
BstFNI	CGCG	3 cut(s)	995, 1518, 1702
BstHHI	GCGC	2 cut(s)	559, 1704
BstKTI	GATC	6 cut(s)	235, 395, 510, 1309, 1375, 1438
BstMAI	GTCTC	4 cut(s)	725, 1052, 1204, 1518
BstMBI	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
BstMWI	GCNNNNNNNGC	8 cut(s)	452, 749, 1264, 1279, 1500, 1745, 1988, 2056
BstNI	CCWGG	2 cut(s)	530, 925
BstNSI	RCATGY	2 cut(s)	775, 1854
BstPAI	GACNNNNGTC	1 cut(s)	1671
BstPI	GGTNACC	1 cut(s)	1969
BstSCI	CCNGG	4 cut(s)	146, 528, 923, 1624
BstSLI	GKGCMC	1 cut(s)	1496
BstUI	CGCG	3 cut(s)	995, 1518, 1702
BstV1I	GCAGC	7 cut(s)	541, 546, 736, 1877, 1910, 1966, 1978
BstV2I	GAAGAC	1 cut(s)	1789
BstX2I	RGATCY	2 cut(s)	232, 1372
BstYI	RGATCY	2 cut(s)	232, 1372
Bsu36I	CCTNAGG	1 cut(s)	570
BsuRI	GGCC	3 cut(s)	713, 1362, 1560
BtgZI	GCGATG	1 cut(s)	1120
BtrI	CACGTC	1 cut(s)	2006
BtsCI	GGATG	6 cut(s)	1260, 1450, 1458, 1465, 1683, 1769
BtsIMutI	CAGTG	3 cut(s)	402, 621, 714
BveI	ACCTGC	1 cut(s)	1492
Cac8I	GCNNGC	5 cut(s)	1796, 1941, 1989, 1996, 2052
CaiI	CAGNNNCTG	3 cut(s)	401, 577, 749
CfoI	GCGC	2 cut(s)	559, 1704
Cfr13I	GGNCC	4 cut(s)	304, 574, 1622, 1666
CseI	GACGC	3 cut(s)	1001, 1247, 1862
Csp6I	GTAC	4 cut(s)	805, 928, 1101, 1295
CspCI	CAANNNNNGTGG	4 cut(s)	703, 738, 1298, 1333
CviAII	CATG	6 cut(s)	772, 785, 1611, 1656, 1851, 1869
CviQI	GTAC	4 cut(s)	805, 928, 1101, 1295
DdeI	CTNAG	7 cut(s)	274, 570, 602, 1061, 1070, 1283, 1802
DpnI	GATC	6 cut(s)	234, 394, 509, 1308, 1374, 1437
DpnII	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
Eam1104I	CTCTTC	3 cut(s)	1212, 1356, 1550
EarI	CTCTTC	3 cut(s)	1212, 1356, 1550
Eco130I	CCWWGG	1 cut(s)	668
Eco24I	GRGCYC	2 cut(s)	129, 904
Eco31I	GGTCTC	1 cut(s)	1518
Eco47I	GGWCC	4 cut(s)	304, 574, 1622, 1666
Eco57I	CTGAAG	2 cut(s)	48, 1743
Eco81I	CCTNAGG	1 cut(s)	570
Eco88I	CYCGRG	2 cut(s)	237, 1329
Eco91I	GGTNACC	1 cut(s)	1969
EcoNI	CCTNNNNNAGG	1 cut(s)	569
EcoO109I	RGGNCCY	1 cut(s)	574
EcoO65I	GGTNACC	1 cut(s)	1969
EcoRI	GAATTC	1 cut(s)	341
EcoRII	CCWGG	2 cut(s)	528, 923
EcoT14I	CCWWGG	1 cut(s)	668
EcoT38I	GRGCYC	2 cut(s)	129, 904
ErhI	CCWWGG	1 cut(s)	668
FaeI	CATG	6 cut(s)	775, 788, 1614, 1659, 1854, 1872
FalI	AAGNNNNNCTT	2 cut(s)	257, 289
FaqI	GGGAC	3 cut(s)	130, 1095, 1397
FatI	CATG	6 cut(s)	771, 784, 1610, 1655, 1850, 1868
FauNDI	CATATG	1 cut(s)	1003
FbaI	TGATCA	1 cut(s)	1306
Fnu4HI	GCNGC	9 cut(s)	555, 560, 750, 824, 1394, 1866, 1899, 1980, 1992
FokI	GGATG	6 cut(s)	1267, 1457, 1465, 1472, 1670, 1756
FriOI	GRGCYC	2 cut(s)	129, 904
Fsp4HI	GCNGC	9 cut(s)	555, 560, 750, 824, 1394, 1866, 1899, 1980, 1992
FspBI	CTAG	4 cut(s)	50, 1214, 1511, 1742
GlaI	GCGC	2 cut(s)	558, 1703
GluI	GCNGC	9 cut(s)	555, 560, 750, 824, 1394, 1866, 1899, 1980, 1992
HaeIII	GGCC	3 cut(s)	713, 1362, 1560
HapII	CCGG	5 cut(s)	148, 1277, 1596, 1625, 1816
HgaI	GACGC	3 cut(s)	1001, 1247, 1862
HhaI	GCGC	2 cut(s)	559, 1704
Hin1I	GRCGYC	1 cut(s)	1873
Hin1II	CATG	6 cut(s)	775, 788, 1614, 1659, 1854, 1872
Hin6I	GCGC	2 cut(s)	557, 1702
HinP1I	GCGC	2 cut(s)	557, 1702
HindIII	AAGCTT	2 cut(s)	89, 444
HinfI	GANTC	5 cut(s)	189, 497, 642, 830, 1568
HpaII	CCGG	5 cut(s)	148, 1277, 1596, 1625, 1816
HphI	GGTGA	4 cut(s)	1001, 1009, 1640, 1652
Hpy166II	GTNNAC	2 cut(s)	304, 1494
Hpy188I	TCNGA	5 cut(s)	199, 762, 1723, 1781, 1963
Hpy188III	TCNNGA	7 cut(s)	35, 186, 538, 577, 905, 962, 1277
Hpy8I	GTNNAC	2 cut(s)	304, 1494
Hpy99I	CGWCG	3 cut(s)	1024, 1422, 1878
HpyCH4III	ACNGT	7 cut(s)	250, 616, 893, 1046, 1207, 1290, 1708
HpyCH4IV	ACGT	3 cut(s)	633, 866, 2005
HpyF10VI	GCNNNNNNNGC	8 cut(s)	452, 749, 1264, 1279, 1500, 1745, 1988, 2056
HpyF3I	CTNAG	7 cut(s)	274, 570, 602, 1061, 1070, 1283, 1802
HpySE526I	ACGT	3 cut(s)	633, 866, 2005
Hsp92I	GRCGYC	1 cut(s)	1873
Hsp92II	CATG	6 cut(s)	775, 788, 1614, 1659, 1854, 1872
HspAI	GCGC	2 cut(s)	557, 1702
Kpn2I	TCCGGA	1 cut(s)	1276
KpnI	GGTACC	2 cut(s)	808, 931
Ksp22I	TGATCA	1 cut(s)	1306
Kzo9I	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
LguI	GCTCTTC	2 cut(s)	1356, 1550
LmnI	GCTCC	3 cut(s)	794, 1279, 2056
Lsp1109I	GCAGC	7 cut(s)	541, 546, 736, 1877, 1910, 1966, 1978
LweI	GCATC	5 cut(s)	753, 1245, 1443, 1450, 1778
MaeI	CTAG	4 cut(s)	50, 1214, 1511, 1742
MaeII	ACGT	3 cut(s)	633, 866, 2005
MaeIII	GTNAC	9 cut(s)	277, 616, 724, 943, 989, 997, 1009, 1628, 1969
MalI	GATC	6 cut(s)	234, 394, 509, 1308, 1374, 1437
MbiI	CCGCTC	2 cut(s)	691, 823
MboI	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
MboII	GAAGA	9 cut(s)	232, 492, 1018, 1229, 1343, 1367, 1537, 1686, 1794
MfeI	CAATTG	1 cut(s)	816
MflI	RGATCY	2 cut(s)	232, 1372
MhlI	GDGCHC	3 cut(s)	129, 904, 1496
MluCI	AATT	7 cut(s)	13, 341, 423, 816, 967, 1551, 1760
MlyI	GAGTC	1 cut(s)	198
MmeI	TCCRAC	4 cut(s)	239, 818, 1090, 1941
MroI	TCCGGA	1 cut(s)	1276
MroXI	GAANNNNTTC	2 cut(s)	375, 1350
MseI	TTAA	5 cut(s)	93, 167, 432, 708, 1479
MslI	CAYNNNNRTG	2 cut(s)	1205, 1831
MspA1I	CMGCKG	1 cut(s)	2054
MspCI	CTTAAG	1 cut(s)	92
MspI	CCGG	5 cut(s)	148, 1277, 1596, 1625, 1816
MspR9I	CCNGG	4 cut(s)	148, 530, 925, 1626
MunI	CAATTG	1 cut(s)	816
Mva1269I	GAATGC	1 cut(s)	2020
MvaI	CCWGG	2 cut(s)	530, 925
MvnI	CGCG	3 cut(s)	995, 1518, 1702
MwoI	GCNNNNNNNGC	8 cut(s)	452, 749, 1264, 1279, 1500, 1745, 1988, 2056
NciI	CCSGG	2 cut(s)	148, 1626
NdeI	CATATG	1 cut(s)	1003
NdeII	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
NlaIII	CATG	6 cut(s)	775, 788, 1614, 1659, 1854, 1872
NlaIV	GGNNCC	7 cut(s)	306, 806, 929, 1397, 1668, 2011, 2058
NmuCI	GTSAC	6 cut(s)	616, 724, 943, 989, 997, 1628
NspI	RCATGY	2 cut(s)	775, 1854
NspV	TTCGAA	2 cut(s)	132, 1378
OliI	CACNNNNGTG	1 cut(s)	1205
PaeR7I	CTCGAG	2 cut(s)	237, 1329
PciI	ACATGT	1 cut(s)	771
PciSI	GCTCTTC	2 cut(s)	1356, 1550
PctI	GAATGC	1 cut(s)	2020
PdmI	GAANNNNTTC	2 cut(s)	375, 1350
PfeI	GAWTC	4 cut(s)	497, 642, 830, 1568
PflFI	GACNNNGTC	1 cut(s)	1529
PfoI	TCCNGGA	1 cut(s)	146
PkrI	GCNGC	9 cut(s)	556, 561, 751, 825, 1395, 1867, 1900, 1981, 1993
PleI	GAGTC	1 cut(s)	197
PpsI	GAGTC	1 cut(s)	197
PpuMI	RGGWCCY	1 cut(s)	574
PscI	ACATGT	1 cut(s)	771
PshAI	GACNNNNGTC	1 cut(s)	1671
Psp5II	RGGWCCY	1 cut(s)	574
Psp6I	CCWGG	2 cut(s)	528, 923
PspEI	GGTNACC	1 cut(s)	1969
PspGI	CCWGG	2 cut(s)	528, 923
PspN4I	GGNNCC	7 cut(s)	306, 806, 929, 1397, 1668, 2011, 2058
PspPI	GGNCC	4 cut(s)	304, 574, 1622, 1666
PspPPI	RGGWCCY	1 cut(s)	574
PspXI	VCTCGAGB	2 cut(s)	237, 1329
PstNI	CAGNNNCTG	3 cut(s)	401, 577, 749
PsuI	RGATCY	2 cut(s)	232, 1372
PsyI	GACNNNGTC	1 cut(s)	1529
RsaI	GTAC	4 cut(s)	806, 929, 1102, 1296
RsaNI	GTAC	4 cut(s)	805, 928, 1101, 1295
RseI	CAYNNNNRTG	2 cut(s)	1205, 1831
SapI	GCTCTTC	2 cut(s)	1356, 1550
SaqAI	TTAA	5 cut(s)	93, 167, 432, 708, 1479
SatI	GCNGC	9 cut(s)	555, 560, 750, 824, 1394, 1866, 1899, 1980, 1992
Sau3AI	GATC	6 cut(s)	232, 392, 507, 1306, 1372, 1435
Sau96I	GGNCC	4 cut(s)	304, 574, 1622, 1666
ScaI	AGTACT	1 cut(s)	1102
SchI	GAGTC	1 cut(s)	198
ScrFI	CCNGG	4 cut(s)	148, 530, 925, 1626
SduI	GDGCHC	3 cut(s)	129, 904, 1496
SfaNI	GCATC	5 cut(s)	753, 1245, 1443, 1450, 1778
Sfr274I	CTCGAG	2 cut(s)	237, 1329
SfuI	TTCGAA	2 cut(s)	132, 1378
SinI	GGWCC	4 cut(s)	304, 574, 1622, 1666
SlaI	CTCGAG	2 cut(s)	237, 1329
SmiMI	CAYNNNNRTG	2 cut(s)	1205, 1831
SmlI	CTYRAG	5 cut(s)	92, 237, 903, 1329, 1907
SmoI	CTYRAG	5 cut(s)	92, 237, 903, 1329, 1907
Sse9I	AATT	7 cut(s)	13, 341, 423, 816, 967, 1551, 1760
SsiI	CCGC	8 cut(s)	606, 689, 823, 995, 1393, 1516, 1614, 2054
SspI	AATATT	1 cut(s)	228
SspMI	CTAG	4 cut(s)	50, 1214, 1511, 1742
StyD4I	CCNGG	4 cut(s)	146, 528, 923, 1624
StyI	CCWWGG	1 cut(s)	668
TaaI	ACNGT	7 cut(s)	250, 616, 893, 1046, 1207, 1290, 1708
TaiI	ACGT	3 cut(s)	636, 869, 2008
TasI	AATT	7 cut(s)	13, 341, 423, 816, 967, 1551, 1760
TatI	WGTACW	1 cut(s)	1100
TauI	GCSGC	2 cut(s)	826, 1396
TfiI	GAWTC	4 cut(s)	497, 642, 830, 1568
Tru1I	TTAA	5 cut(s)	93, 167, 432, 708, 1479
Tru9I	TTAA	5 cut(s)	93, 167, 432, 708, 1479
TscAI	CASTG	3 cut(s)	402, 621, 721
TseFI	GTSAC	6 cut(s)	616, 724, 943, 989, 997, 1628
TseI	GCWGC	7 cut(s)	554, 559, 749, 1865, 1898, 1979, 1991
Tsp45I	GTSAC	6 cut(s)	616, 724, 943, 989, 997, 1628
TspDTI	ATGAA	6 cut(s)	354, 634, 1461, 1537, 1551, 1846
TspGWI	ACGGA	1 cut(s)	1312
TspRI	CASTG	3 cut(s)	402, 621, 721
Tth111I	GACNNNGTC	1 cut(s)	1529
Vha464I	CTTAAG	1 cut(s)	92
VneI	GTGCAC	1 cut(s)	1492
VpaK11BI	GGWCC	4 cut(s)	304, 574, 1622, 1666
XagI	CCTNNNNNAGG	1 cut(s)	569
XapI	RAATTY	3 cut(s)	341, 423, 1760
XceI	RCATGY	2 cut(s)	775, 1854
XhoI	CTCGAG	2 cut(s)	237, 1329
XmnI	GAANNNNTTC	2 cut(s)	375, 1350
XspI	CTAG	4 cut(s)	50, 1214, 1511, 1742
ZrmI	AGTACT	1 cut(s)	1102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.