Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0010666

Physical Location & Seq

Genomic Coordinates Forward (+)

62931075 .. 62935737

Gene Structure 4663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G036010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGGTTATGGAAACTCAAGATCTGTAAGATTTCAAGATGATGTTGAATTAGCAAAGCTACCTTCAGTCAATGGAGTTGGTGATGTTAAGTTCAAGTACAAGATTGATGGGACTCAAGTACCAGAGACCAGCACCAAGAGAATTGATAAGGAGCTGCCTGGAAAGTCTGGGAAATCTTTGAAAGCTAAAGTACTGTCCAGAGTCTTTTCTGAGGACTATGAGAGTGAGAAGAAGAAGATATTAGATCCTCGAGGACCAACAATTCACCGATGGAACAAGATTTTCCTAGTAACCTGTTTGATTTCTTTGTTCGTAGACCCTTTATTCTTTTACTTGCCAGAGGTCAGAGACCAAGTCTGTATTGATATTGGAATACCACTTGAAGTTGTTCTTACCATTCTTCGATCAGTGGCGGATGTTTTTTACATAATTCAGATTTATATTAGATTTCGTAAAGCATATATTGCACCTTCCTCTCGAGTATTTGGGAGAGGAGAGCTTGTTATAGACTCTTCAAAGATCGCATTTAGGTACCTCCGGTTTGGTTTCTGGATTGACCTCATTGCTGCCCTGCCCCTTCCTCAGGTACTAATTTGGATTGTAATCCCCAACCTTAATGGTTCAACAATGACAAACACCAAAAACGTTCTTCGGTTCATCATAATCTTTCAGTACATACCAAGGCTCTTTCTTATATTTCCGCTATCGTCACAAATTGTTAAGGCCACTGGTGTTGTGACAGAGACAGCATGGGCAGGGGCTGCATATAACCTGATGTTATACATGTTGGCAAGTCATGTTTTAGGAGCTTGTTGGTACCTTCTTTCAATTGAGCGGCAAGAAGCATGCTGGAGACAAGTTTGTGAGGAAGACAATACAAATTGTGAATATGGTTATTTAGATTGCAAAATGGTGCAAGACCCCAAAAGGTTCTCCTGGTTCCAGTCAAGTAATGTCACAAACCGATGTGATCCAGAAGAAAACTCTTATGAATTTGGTATATACGGTGATGCGGTAACATATGGTGTTACGACCTCATCATTCTTCAACAAGTACTTTTACTGTCTTTGGTGGGGTCTAAGAAACCTCAGTTCCTTGGGGCAGAATCTTTCGACCAGCACTTATGTCGGAGAAATAATCTTTGCCATTATTATTGCGACTCTTGGACTAGTCCTCTTTGCTTTGCTGATCGGTAATATGCAAACCTACCTTCAATCCACAACTGTCCGACTAGAAGAGTGGAGGATCAAGAGAACTGATACAGAGCAATGGATGCGTCACAGGCAGCTGCCTCCAGAATTAAGACTGTCTGTAAGGAAGTATGATCAGTATAAGTGGCTGGCTACTCGAGGAGTCGATGAAGAAAGTCTTCTTAAAGGCCTACCTTTGGATCTTCGAAGAGACATCAAACGCCACCTTTGCCTTGACCTTGTTCGTCGGGTCCCTATGTTTGATCAAATGGACGAAAGAATGCTAGATGCAATATGTGACAGGCTTAAACCTGCTTTGGGTACTGAAGGCACATTTCTAGTGCGCGAAGGTGATCCTGTCAATGAAATGCTCTTCATAGTTCGAGGCCACCTTGATTCTTACACCACCAATGGTGGCCGGACGGGATTTTTCAACTCATGTCATCTTGGCCCTGGTGACTTCTGTGGAGAAGAACTATTGACGTGGGCCTTAGACCCTCGTCCGAGTGTCATTCTCCCATCTTCAACGCGCACAGTCAAAGCGCTTTCTGAAGTAGAAGCATTTGCTCTAGTAGCAGAGGACTTGAAATTTGTTGCATCACAGTTTAGGAGACTTCATAGCAAGCAACTTAGGCACAAGTTCCGGTTCTATTCACACCAGTGGCGGTTATGGTCTGCATGTTTCATACAGGCTGCTTGGCGTCGGTATAAGAAGCGCAGGGAGGCAGCAGAGCTCAAGGCTAAAGAAAACCACACGGCCGCTGCACCTGCGCAACCCCCACCCATCTCAGGCTTGGCTACTTATGCTACAATGCTTGCTGCAAGTACTAGGAGGGGTGCCAAGAAGCATCCTGGGTCAGACTCTGGGGTTGTAAGTTCATTACAGAAGCCAGCAGAGCCTGATTTCTCTGTTGATGATGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0008150 GO:0008324 GO:0009877 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0031965 GO:0031967 GO:0031975 GO:0034220 GO:0036377 GO:0042391 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

705

Amino Acids

80.68

Weight (kDa)

8.95

Isoelectric Point (pI)

45.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	91 - 410	4.4e-20	Ion transport protein
cNMP_binding	PF00027	506 - 593	6.5e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28260 AT2G28260
fragaria_vesca	FvH4_3g31830 FvH4_3g31830 FvH4_3g31830
malus_domestica	MD03G1120600.v1.1 MD11G1139100.v1.1
prunus_persica	Prupe.6G104000_v2.0.a1 Prupe.6G104000_v2.0.a1
pyrus_communis	pycom11g11500
rosa_chinensis	RchiOBHm_Chr5g0058601
rosa_laevigata	RLG00000035235
rosa_multiflora	Rmu_sc0000367.1_g000155
rosa_roxburghii	Rroxscaffold_1G00021860
rosa_rugosa	Rorug05G0316200 Rorug05G0316300 Rorug05G0316400
rosa_samantha	Rh5AG382400 Rh5BG394200
rosa_wichuraiana	Rw5G036010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1966
AbsI	CCTCGAGG	1 cut(s)	249
Acc16I	TGCGCA	1 cut(s)	1962
Acc36I	ACCTGC	2 cut(s)	1510, 1966
Acc65I	GGTACC	2 cut(s)	531, 816
AccB1I	GGYRCC	3 cut(s)	531, 816, 2027
AccBSI	CCGCTC	1 cut(s)	835
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	2 cut(s)	1536, 1720
AciI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
AclI	AACGTT	1 cut(s)	645
AclWI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
AcoI	YGGCCR	2 cut(s)	1606, 1947
AcsI	RAATTY	2 cut(s)	992, 1778
AcuI	CTGAAG	3 cut(s)	48, 1536, 1761
AcyI	GRCGYC	1 cut(s)	1891
AfeI	AGCGCT	1 cut(s)	1734
AfiI	CCNNNNNNNGG	4 cut(s)	583, 1387, 1508, 1979
AflIII	ACRYGT	1 cut(s)	783
AhlI	ACTAGT	1 cut(s)	1168
AjiI	CACGTC	1 cut(s)	1674
AjnI	CCWGG	4 cut(s)	157, 935, 1642, 2041
AleI	CACNNNNGTG	1 cut(s)	1849
AluBI	AGCT	7 cut(s)	58, 154, 185, 499, 809, 1288, 1924
AluI	AGCT	7 cut(s)	58, 154, 185, 499, 809, 1288, 1924
Alw21I	GWGCWC	1 cut(s)	1926
Alw26I	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
AlwI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
AlwNI	CAGNNNCTG	3 cut(s)	761, 2054, 2090
Ama87I	CYCGRG	3 cut(s)	249, 477, 1347
Aor51HI	AGCGCT	1 cut(s)	1734
AoxI	GGCC	7 cut(s)	723, 1378, 1576, 1606, 1639, 1677, 1947
ApeKI	GCWGC	9 cut(s)	154, 566, 761, 1285, 1288, 1883, 1916, 1952, 2009
ApoI	RAATTY	2 cut(s)	992, 1778
ArsI	GACNNNNNNTTYG	2 cut(s)	1763, 1795
Asp700I	GAANNNNTTC	2 cut(s)	387, 1368
Asp718I	GGTACC	2 cut(s)	531, 816
AspLEI	GCGC	5 cut(s)	1536, 1722, 1735, 1908, 1963
AspS9I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
AsuHPI	GGTGA	5 cut(s)	92, 257, 1019, 1553, 1658
AsuII	TTCGAA	1 cut(s)	1396
AvaI	CYCGRG	3 cut(s)	249, 477, 1347
AvaII	GGWCC	2 cut(s)	254, 1441
AxyI	CCTNAGG	1 cut(s)	582
BaeI	ACNNNNGTAYC	2 cut(s)	102, 135
BanI	GGYRCC	3 cut(s)	531, 816, 2027
BanII	GRGCYC	1 cut(s)	1926
BbsI	GAAGAC	2 cut(s)	876, 1361
Bbv12I	GWGCWC	1 cut(s)	1926
BbvI	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BccI	CCATC	4 cut(s)	101, 264, 1717, 1982
BceAI	ACGGC	1 cut(s)	1962
BcgI	CGANNNNNNTGC	2 cut(s)	1108, 1142
BciT130I	CCWGG	4 cut(s)	159, 937, 1644, 2043
BclI	TGATCA	2 cut(s)	1324, 1453
BcoDI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BcuI	ACTAGT	1 cut(s)	1168
BfaI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
BfoI	RGCGCY	1 cut(s)	1736
BfuAI	ACCTGC	2 cut(s)	1510, 1966
BglII	AGATCT	1 cut(s)	20
BmcAI	AGTACT	3 cut(s)	192, 1055, 2017
Bme1390I	CCNGG	4 cut(s)	159, 937, 1644, 2043
Bme18I	GGWCC	2 cut(s)	254, 1441
BmeT110I	CYCGRG	3 cut(s)	249, 477, 1347
BmgBI	CACGTC	1 cut(s)	1674
BmgT120I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
BmiI	GGNNCC	6 cut(s)	533, 818, 941, 1442, 1443, 2029
BmrFI	CCNGG	4 cut(s)	159, 937, 1644, 2043
BmsI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
BoxI	GACNNNNGTC	1 cut(s)	1689
BpiI	GAAGAC	2 cut(s)	876, 1361
BpmI	CTGGAG	2 cut(s)	871, 1278
Bpu14I	TTCGAA	1 cut(s)	1396
BpuEI	CTTGAG	2 cut(s)	99, 1910
BsaBI	GATNNNNATC	1 cut(s)	602
BsaHI	GRCGYC	1 cut(s)	1891
BsaI	GGTCTC	2 cut(s)	119, 342
BsaJI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BsaWI	WCCGGW	2 cut(s)	537, 1833
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	4 cut(s)	583, 1387, 1508, 1979
Bse1I	ACTGG	3 cut(s)	733, 943, 1849
Bse21I	CCTNAGG	1 cut(s)	582
Bse3DI	GCAATG	2 cut(s)	561, 1274
Bse8I	GATNNNNATC	1 cut(s)	602
BseBI	CCWGG	4 cut(s)	159, 937, 1644, 2043
BseDI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BseGI	GGATG	3 cut(s)	421, 1278, 2038
BseJI	GATNNNNATC	1 cut(s)	602
BseLI	CCNNNNNNNGG	4 cut(s)	583, 1387, 1508, 1979
BseMI	GCAATG	2 cut(s)	561, 1274
BseMII	CTCAG	4 cut(s)	201, 596, 1102, 1992
BseNI	ACTGG	3 cut(s)	733, 943, 1849
BseRI	GAGGAG	2 cut(s)	507, 1365
BseX3I	CGGCCG	1 cut(s)	1947
BseXI	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BsgI	GTGCAG	1 cut(s)	1938
Bsh1236I	CGCG	2 cut(s)	1536, 1720
Bsh1285I	CGRYCG	1 cut(s)	1950
BshFI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BshNI	GGYRCC	3 cut(s)	531, 816, 2027
BsiEI	CGRYCG	1 cut(s)	1950
BsiHKAI	GWGCWC	1 cut(s)	1926
BsiHKCI	CYCGRG	3 cut(s)	249, 477, 1347
BsiSI	CCGG	3 cut(s)	538, 1609, 1834
BslFI	GGGAC	2 cut(s)	124, 1427
BslI	CCNNNNNNNGG	4 cut(s)	583, 1387, 1508, 1979
BsmAI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BsmFI	GGGAC	2 cut(s)	124, 1427
BsmI	GAATGC	1 cut(s)	1476
BsnI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
Bso31I	GGTCTC	2 cut(s)	119, 342
BsoBI	CYCGRG	3 cut(s)	249, 477, 1347
Bsp119I	TTCGAA	1 cut(s)	1396
Bsp1286I	GDGCHC	1 cut(s)	1926
BspACI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
BspANI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BspCNI	CTCAG	4 cut(s)	202, 595, 1101, 1991
BspFNI	CGCG	2 cut(s)	1536, 1720
BspLI	GGNNCC	6 cut(s)	533, 818, 941, 1442, 1443, 2029
BspMI	ACCTGC	2 cut(s)	1510, 1966
BspPI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
BspQI	GCTCTTC	1 cut(s)	1568
BspT104I	TTCGAA	1 cut(s)	1396
BspT107I	GGYRCC	3 cut(s)	531, 816, 2027
BspTNI	GGTCTC	2 cut(s)	119, 342
BsrBI	CCGCTC	1 cut(s)	835
BsrDI	GCAATG	2 cut(s)	561, 1274
BsrI	ACTGG	3 cut(s)	733, 943, 1849
BssECI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BssNI	GRCGYC	1 cut(s)	1891
BssT1I	CCWWGG	2 cut(s)	680, 1095
Bst2UI	CCWGG	4 cut(s)	159, 937, 1644, 2043
Bst4CI	ACNGT	7 cut(s)	195, 1007, 1064, 1225, 1308, 1726, 1794
Bst6I	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
BstACI	GRCGYC	1 cut(s)	1891
BstAPI	GCANNNNNTGC	3 cut(s)	464, 761, 1273
BstBI	TTCGAA	1 cut(s)	1396
BstC8I	GCNNGC	5 cut(s)	847, 1341, 1814, 2007, 2082
BstDEI	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
BstENI	CCTNNNNNAGG	1 cut(s)	581
BstF5I	GGATG	3 cut(s)	421, 1278, 2038
BstFNI	CGCG	2 cut(s)	1536, 1720
BstH2I	RGCGCY	1 cut(s)	1736
BstHHI	GCGC	5 cut(s)	1536, 1722, 1735, 1908, 1963
BstMAI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BstMCI	CGRYCG	1 cut(s)	1950
BstNI	CCWGG	4 cut(s)	159, 937, 1644, 2043
BstNSI	RCATGY	3 cut(s)	787, 849, 1872
BstPAI	GACNNNNGTC	1 cut(s)	1689
BstSCI	CCNGG	4 cut(s)	157, 935, 1642, 2041
BstUI	CGCG	2 cut(s)	1536, 1720
BstV1I	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BstV2I	GAAGAC	2 cut(s)	876, 1361
BstX2I	RGATCY	3 cut(s)	20, 244, 1390
BstYI	RGATCY	3 cut(s)	20, 244, 1390
BstZI	CGGCCG	1 cut(s)	1947
Bsu36I	CCTNAGG	1 cut(s)	582
BsuRI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BtrI	CACGTC	1 cut(s)	1674
BtsCI	GGATG	3 cut(s)	421, 1278, 2038
BtsIMutI	CAGTG	3 cut(s)	414, 726, 1856
BveI	ACCTGC	2 cut(s)	1510, 1966
Cac8I	GCNNGC	5 cut(s)	847, 1341, 1814, 2007, 2082
CaiI	CAGNNNCTG	3 cut(s)	761, 2054, 2090
CfoI	GCGC	5 cut(s)	1536, 1722, 1735, 1908, 1963
Cfr13I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
CseI	GACGC	2 cut(s)	1265, 1880
CspCI	CAANNNNNGTGG	2 cut(s)	715, 750
CviAII	CATG	6 cut(s)	750, 784, 797, 846, 1629, 1869
DdeI	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
EaeI	YGGCCR	2 cut(s)	1606, 1947
EagI	CGGCCG	1 cut(s)	1947
Eam1104I	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
EarI	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	1924
EclXI	CGGCCG	1 cut(s)	1947
Eco130I	CCWWGG	2 cut(s)	680, 1095
Eco147I	AGGCCT	1 cut(s)	1380
Eco24I	GRGCYC	1 cut(s)	1926
Eco31I	GGTCTC	2 cut(s)	119, 342
Eco47I	GGWCC	2 cut(s)	254, 1441
Eco47III	AGCGCT	1 cut(s)	1734
Eco52I	CGGCCG	1 cut(s)	1947
Eco53kI	GAGCTC	1 cut(s)	1924
Eco57I	CTGAAG	3 cut(s)	48, 1536, 1761
Eco81I	CCTNAGG	1 cut(s)	582
Eco88I	CYCGRG	3 cut(s)	249, 477, 1347
EcoICRI	GAGCTC	1 cut(s)	1924
EcoNI	CCTNNNNNAGG	1 cut(s)	581
EcoO109I	RGGNCCY	1 cut(s)	1441
EcoRII	CCWGG	4 cut(s)	157, 935, 1642, 2041
EcoT14I	CCWWGG	2 cut(s)	680, 1095
EcoT38I	GRGCYC	1 cut(s)	1926
ErhI	CCWWGG	2 cut(s)	680, 1095
FaeI	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
FalI	AAGNNNNNCTT	4 cut(s)	375, 407, 1353, 1385
FaqI	GGGAC	2 cut(s)	124, 1427
FatI	CATG	6 cut(s)	749, 783, 796, 845, 1628, 1868
FauNDI	CATATG	1 cut(s)	1021
FbaI	TGATCA	2 cut(s)	1324, 1453
FblI	GTMKAC	1 cut(s)	315
FokI	GGATG	3 cut(s)	428, 1285, 2025
FriOI	GRGCYC	1 cut(s)	1926
FspBI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
FspI	TGCGCA	1 cut(s)	1962
GlaI	GCGC	5 cut(s)	1535, 1721, 1734, 1907, 1962
GsuI	CTGGAG	2 cut(s)	871, 1278
HaeII	RGCGCY	1 cut(s)	1736
HaeIII	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
HapII	CCGG	3 cut(s)	538, 1609, 1834
HgaI	GACGC	2 cut(s)	1265, 1880
HhaI	GCGC	5 cut(s)	1536, 1722, 1735, 1908, 1963
Hin1I	GRCGYC	1 cut(s)	1891
Hin1II	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
Hin6I	GCGC	5 cut(s)	1534, 1720, 1733, 1906, 1961
HinP1I	GCGC	5 cut(s)	1534, 1720, 1733, 1906, 1961
HinfI	GANTC	8 cut(s)	112, 201, 509, 1105, 1159, 1353, 1586, 2051
HpaII	CCGG	3 cut(s)	538, 1609, 1834
HphI	GGTGA	5 cut(s)	92, 257, 1019, 1553, 1658
Hpy166II	GTNNAC	1 cut(s)	316
Hpy188I	TCNGA	8 cut(s)	211, 347, 435, 1130, 1229, 1695, 1741, 2050
Hpy188III	TCNNGA	8 cut(s)	18, 35, 198, 477, 550, 974, 1249, 1295
Hpy8I	GTNNAC	1 cut(s)	316
Hpy99I	CGWCG	2 cut(s)	1440, 1896
HpyAV	CCTTC	7 cut(s)	72, 480, 587, 830, 1220, 1511, 1532
HpyCH4III	ACNGT	7 cut(s)	195, 1007, 1064, 1225, 1308, 1726, 1794
HpyCH4IV	ACGT	2 cut(s)	645, 1673
HpyF3I	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
HpySE526I	ACGT	2 cut(s)	645, 1673
Hsp92I	GRCGYC	1 cut(s)	1891
Hsp92II	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
HspAI	GCGC	5 cut(s)	1534, 1720, 1733, 1906, 1961
KflI	GGGWCCC	1 cut(s)	1441
KpnI	GGTACC	2 cut(s)	535, 820
Ksp22I	TGATCA	2 cut(s)	1324, 1453
LguI	GCTCTTC	1 cut(s)	1568
LmnI	GCTCC	2 cut(s)	151, 806
Lsp1109I	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
LweI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
MaeI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
MaeII	ACGT	2 cut(s)	645, 1673
MaeIII	GTNAC	9 cut(s)	289, 708, 736, 955, 1015, 1027, 1277, 1487, 1646
MbiI	CCGCTC	1 cut(s)	835
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	3 cut(s)	20, 244, 1390
MhlI	GDGCHC	1 cut(s)	1926
MlyI	GAGTC	6 cut(s)	106, 210, 503, 1153, 1362, 2045
MmeI	TCCRAC	2 cut(s)	1108, 1252
MroXI	GAANNNNTTC	2 cut(s)	387, 1368
MseI	TTAA	6 cut(s)	87, 615, 720, 1301, 1374, 1497
MslI	CAYNNNNRTG	1 cut(s)	1849
MspA1I	CMGCKG	2 cut(s)	1288, 1952
MspI	CCGG	3 cut(s)	538, 1609, 1834
MspR9I	CCNGG	4 cut(s)	159, 937, 1644, 2043
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	1 cut(s)	1476
MvaI	CCWGG	4 cut(s)	159, 937, 1644, 2043
MvnI	CGCG	2 cut(s)	1536, 1720
NdeI	CATATG	1 cut(s)	1021
NlaIII	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
NlaIV	GGNNCC	6 cut(s)	533, 818, 941, 1442, 1443, 2029
NmuCI	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
NsbI	TGCGCA	1 cut(s)	1962
NspI	RCATGY	3 cut(s)	787, 849, 1872
NspV	TTCGAA	1 cut(s)	1396
OliI	CACNNNNGTG	1 cut(s)	1849
PaeI	GCATGC	1 cut(s)	849
PaeR7I	CTCGAG	3 cut(s)	249, 477, 1347
PaqCI	CACCTGC	1 cut(s)	1966
PceI	AGGCCT	1 cut(s)	1380
PciI	ACATGT	1 cut(s)	783
PciSI	GCTCTTC	1 cut(s)	1568
PctI	GAATGC	1 cut(s)	1476
PdmI	GAANNNNTTC	2 cut(s)	387, 1368
PfeI	GAWTC	2 cut(s)	1105, 1586
PflFI	GACNNNGTC	1 cut(s)	353
PleI	GAGTC	6 cut(s)	106, 209, 503, 1153, 1361, 2045
PpsI	GAGTC	6 cut(s)	106, 209, 503, 1153, 1361, 2045
PpuMI	RGGWCCY	1 cut(s)	1441
PscI	ACATGT	1 cut(s)	783
PshAI	GACNNNNGTC	1 cut(s)	1689
Psp124BI	GAGCTC	1 cut(s)	1926
Psp1406I	AACGTT	1 cut(s)	645
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	4 cut(s)	157, 935, 1642, 2041
PspGI	CCWGG	4 cut(s)	157, 935, 1642, 2041
PspN4I	GGNNCC	6 cut(s)	533, 818, 941, 1442, 1443, 2029
PspPI	GGNCC	4 cut(s)	254, 1441, 1640, 1677
PspPPI	RGGWCCY	1 cut(s)	1441
PspXI	VCTCGAGB	2 cut(s)	249, 1347
PstNI	CAGNNNCTG	3 cut(s)	761, 2054, 2090
PsuI	RGATCY	3 cut(s)	20, 244, 1390
PsyI	GACNNNGTC	1 cut(s)	353
PvuII	CAGCTG	1 cut(s)	1288
RseI	CAYNNNNRTG	1 cut(s)	1849
SacI	GAGCTC	1 cut(s)	1926
SapI	GCTCTTC	1 cut(s)	1568
SaqAI	TTAA	6 cut(s)	87, 615, 720, 1301, 1374, 1497
Sau96I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
ScaI	AGTACT	3 cut(s)	192, 1055, 2017
SchI	GAGTC	6 cut(s)	106, 210, 503, 1153, 1362, 2045
ScrFI	CCNGG	4 cut(s)	159, 937, 1644, 2043
SduI	GDGCHC	1 cut(s)	1926
SfaNI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
Sfr274I	CTCGAG	3 cut(s)	249, 477, 1347
SfuI	TTCGAA	1 cut(s)	1396
SinI	GGWCC	2 cut(s)	254, 1441
SlaI	CTCGAG	3 cut(s)	249, 477, 1347
SmiMI	CAYNNNNRTG	1 cut(s)	1849
SmlI	CTYRAG	6 cut(s)	16, 114, 249, 477, 1347, 1925
SmoI	CTYRAG	6 cut(s)	16, 114, 249, 477, 1347, 1925
SpeI	ACTAGT	1 cut(s)	1168
SphI	GCATGC	1 cut(s)	849
SseBI	AGGCCT	1 cut(s)	1380
SsiI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
SspMI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
SstI	GAGCTC	1 cut(s)	1926
StuI	AGGCCT	1 cut(s)	1380
StyD4I	CCNGG	4 cut(s)	157, 935, 1642, 2041
StyI	CCWWGG	2 cut(s)	680, 1095
TaaI	ACNGT	7 cut(s)	195, 1007, 1064, 1225, 1308, 1726, 1794
TaiI	ACGT	2 cut(s)	648, 1676
TaqI	TCGA	8 cut(s)	250, 403, 478, 1112, 1348, 1356, 1396, 1573
TatI	WGTACW	5 cut(s)	96, 190, 672, 1053, 2015
TauI	GCSGC	2 cut(s)	838, 1952
TfiI	GAWTC	2 cut(s)	1105, 1586
Tru1I	TTAA	6 cut(s)	87, 615, 720, 1301, 1374, 1497
Tru9I	TTAA	6 cut(s)	87, 615, 720, 1301, 1374, 1497
TscAI	CASTG	3 cut(s)	414, 733, 1856
TseFI	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
TseI	GCWGC	9 cut(s)	154, 566, 761, 1285, 1288, 1883, 1916, 1952, 2009
Tsp45I	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
TspDTI	ATGAA	8 cut(s)	646, 1005, 1374, 1555, 1569, 1796, 1864, 2058
TspRI	CASTG	3 cut(s)	414, 733, 1856
Tth111I	GACNNNGTC	1 cut(s)	353
VpaK11BI	GGWCC	2 cut(s)	254, 1441
XagI	CCTNNNNNAGG	1 cut(s)	581
XapI	RAATTY	2 cut(s)	992, 1778
XceI	RCATGY	3 cut(s)	787, 849, 1872
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1981
XhoI	CTCGAG	3 cut(s)	249, 477, 1347
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	2 cut(s)	387, 1368
XspI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
ZrmI	AGTACT	3 cut(s)	192, 1055, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.