cyclic nucleotide-gated ion channel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28260 AT2G28260 |
| fragaria_vesca | FvH4_3g31830 FvH4_3g31830 FvH4_3g31830 |
| malus_domestica | MD03G1120600.v1.1 MD11G1139100.v1.1 |
| prunus_persica | Prupe.6G104000_v2.0.a1 Prupe.6G104000_v2.0.a1 |
| pyrus_communis | pycom11g11500 |
| rosa_chinensis | RchiOBHm_Chr5g0058601 |
| rosa_laevigata | RLG00000035235 |
| rosa_multiflora | Rmu_sc0000367.1_g000155 |
| rosa_roxburghii | Rroxscaffold_1G00021860 |
| rosa_rugosa | Rorug05G0316200 Rorug05G0316300 Rorug05G0316400 |
| rosa_samantha | Rh5AG382400 Rh5BG394200 |
| rosa_wichuraiana | Rw5G036010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 965 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccBSI | CCGCTC | 1 cut(s) | 1235 |
| AccI | GTMKAC | 2 cut(s) | 423, 648 |
| AciI | CCGC | 3 cut(s) | 111, 1233, 1598 |
| AclWI | GGATC | 4 cut(s) | 885, 1055, 1146, 1338 |
| AcsI | RAATTY | 3 cut(s) | 710, 827, 1462 |
| AcuI | CTGAAG | 5 cut(s) | 741, 1292, 1374, 1694, 1724 |
| AfaI | GTAC | 5 cut(s) | 333, 967, 1449, 1742, 1843 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 114, 605, 1239 |
| AflIII | ACRYGT | 3 cut(s) | 935, 1444, 1800 |
| AjnI | CCWGG | 2 cut(s) | 383, 1450 |
| AluBI | AGCT | 8 cut(s) | 26, 223, 278, 415, 1121, 1248, 1708, 1756 |
| AluI | AGCT | 8 cut(s) | 26, 223, 278, 415, 1121, 1248, 1708, 1756 |
| Alw21I | GWGCWC | 1 cut(s) | 1728 |
| Alw26I | GTCTC | 2 cut(s) | 1510, 1809 |
| AlwI | GGATC | 4 cut(s) | 885, 1055, 1146, 1338 |
| AoxI | GGCC | 1 cut(s) | 540 |
| ApeKI | GCWGC | 3 cut(s) | 118, 1121, 1756 |
| ApoI | RAATTY | 3 cut(s) | 710, 827, 1462 |
| Asp718I | GGTACC | 1 cut(s) | 965 |
| AsuHPI | GGTGA | 2 cut(s) | 1523, 1763 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 469, 501, 1347, 1379 |
| BbsI | GAAGAC | 3 cut(s) | 484, 815, 1385 |
| Bbv12I | GWGCWC | 1 cut(s) | 1728 |
| BbvI | GCAGC | 3 cut(s) | 105, 1108, 1743 |
| BccI | CCATC | 8 cut(s) | 58, 204, 286, 560, 690, 955, 1072, 1342 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1047, 1081 |
| BciT130I | CCWGG | 2 cut(s) | 385, 1452 |
| BclI | TGATCA | 1 cut(s) | 1606 |
| BcoDI | GTCTC | 2 cut(s) | 1510, 1809 |
| BfaI | CTAG | 7 cut(s) | 198, 782, 1421, 1524, 1550, 1652, 1761 |
| BfmI | CTRYAG | 3 cut(s) | 273, 410, 1056 |
| BglII | AGATCT | 2 cut(s) | 778, 1357 |
| BisI | GCNGC | 3 cut(s) | 119, 1122, 1757 |
| BlsI | GCNGC | 3 cut(s) | 120, 1123, 1758 |
| Bme1390I | CCNGG | 2 cut(s) | 385, 1452 |
| BmiI | GGNNCC | 2 cut(s) | 381, 967 |
| BmrFI | CCNGG | 2 cut(s) | 385, 1452 |
| BmsI | GCATC | 3 cut(s) | 160, 1601, 1792 |
| BoxI | GACNNNNGTC | 1 cut(s) | 372 |
| BpiI | GAAGAC | 3 cut(s) | 484, 815, 1385 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 1 cut(s) | 413 |
| BpuEI | CTTGAG | 2 cut(s) | 904, 1290 |
| Bsa29I | ATCGAT | 1 cut(s) | 1814 |
| BsaAI | YACGTR | 1 cut(s) | 938 |
| BsaJI | CCNNGG | 1 cut(s) | 383 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 114, 605, 1239 |
| Bse1I | ACTGG | 2 cut(s) | 580, 1332 |
| BseBI | CCWGG | 2 cut(s) | 385, 1452 |
| BseCI | ATCGAT | 1 cut(s) | 1814 |
| BseDI | CCNNGG | 1 cut(s) | 383 |
| BseGI | GGATG | 7 cut(s) | 69, 90, 215, 265, 532, 966, 1353 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 114, 605, 1239 |
| BseMII | CTCAG | 2 cut(s) | 202, 990 |
| BseNI | ACTGG | 2 cut(s) | 580, 1332 |
| BseXI | GCAGC | 3 cut(s) | 105, 1108, 1743 |
| BseYI | CCCAGC | 1 cut(s) | 113 |
| BshFI | GGCC | 1 cut(s) | 542 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BshVI | ATCGAT | 1 cut(s) | 1814 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1728 |
| BsiSI | CCGG | 1 cut(s) | 77 |
| BslFI | GGGAC | 1 cut(s) | 1662 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 114, 605, 1239 |
| BsmAI | GTCTC | 2 cut(s) | 1510, 1809 |
| BsmFI | GGGAC | 1 cut(s) | 1662 |
| BsmI | GAATGC | 1 cut(s) | 1594 |
| BsnI | GGCC | 1 cut(s) | 542 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1728 |
| Bsp143I | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| BspACI | CCGC | 3 cut(s) | 111, 1233, 1598 |
| BspANI | GGCC | 1 cut(s) | 542 |
| BspCNI | CTCAG | 2 cut(s) | 201, 991 |
| BspDI | ATCGAT | 1 cut(s) | 1814 |
| BspHI | TCATGA | 1 cut(s) | 358 |
| BspLI | GGNNCC | 2 cut(s) | 381, 967 |
| BspMAI | CTGCAG | 1 cut(s) | 1060 |
| BspPI | GGATC | 4 cut(s) | 885, 1055, 1146, 1338 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BsrBI | CCGCTC | 1 cut(s) | 1235 |
| BsrI | ACTGG | 2 cut(s) | 580, 1332 |
| BssECI | CCNNGG | 1 cut(s) | 383 |
| BssMI | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| BssNAI | GTATAC | 1 cut(s) | 649 |
| Bst1107I | GTATAC | 1 cut(s) | 649 |
| Bst2UI | CCWGG | 2 cut(s) | 385, 1452 |
| Bst4CI | ACNGT | 3 cut(s) | 274, 859, 1292 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 498, 1209 |
| BstBAI | YACGTR | 1 cut(s) | 938 |
| BstC8I | GCNNGC | 2 cut(s) | 955, 1233 |
| BstDEI | CTNAG | 6 cut(s) | 188, 999, 1492, 1684, 1787, 1795 |
| BstF5I | GGATG | 7 cut(s) | 69, 90, 215, 265, 532, 966, 1353 |
| BstKTI | GATC | 9 cut(s) | 781, 880, 924, 1063, 1141, 1333, 1360, 1420, 1609 |
| BstMAI | GTCTC | 2 cut(s) | 1510, 1809 |
| BstMBI | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 220, 1569, 1789 |
| BstNI | CCWGG | 2 cut(s) | 385, 1452 |
| BstNSI | RCATGY | 4 cut(s) | 957, 1034, 1448, 1804 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 372 |
| BstSCI | CCNGG | 2 cut(s) | 383, 1450 |
| BstSFI | CTRYAG | 3 cut(s) | 273, 410, 1056 |
| BstV1I | GCAGC | 3 cut(s) | 105, 1108, 1743 |
| BstV2I | GAAGAC | 3 cut(s) | 484, 815, 1385 |
| BstX2I | RGATCY | 6 cut(s) | 778, 877, 1060, 1138, 1330, 1357 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 391 |
| BstYI | RGATCY | 6 cut(s) | 778, 877, 1060, 1138, 1330, 1357 |
| BstZ17I | GTATAC | 1 cut(s) | 649 |
| Bsu15I | ATCGAT | 1 cut(s) | 1814 |
| BsuRI | GGCC | 1 cut(s) | 542 |
| BsuTUI | ATCGAT | 1 cut(s) | 1814 |
| BtgZI | GCGATG | 1 cut(s) | 1050 |
| BtsCI | GGATG | 7 cut(s) | 69, 90, 215, 265, 532, 966, 1353 |
| BtsIMutI | CAGTG | 1 cut(s) | 1718 |
| Cac8I | GCNNGC | 2 cut(s) | 955, 1233 |
| CciI | TCATGA | 1 cut(s) | 358 |
| ClaI | ATCGAT | 1 cut(s) | 1814 |
| CsiI | ACCWGGT | 1 cut(s) | 1450 |
| Csp6I | GTAC | 5 cut(s) | 332, 966, 1448, 1741, 1842 |
| CviQI | GTAC | 5 cut(s) | 332, 966, 1448, 1741, 1842 |
| DdeI | CTNAG | 6 cut(s) | 188, 999, 1492, 1684, 1787, 1795 |
| DpnI | GATC | 9 cut(s) | 780, 879, 923, 1062, 1140, 1332, 1359, 1419, 1608 |
| DpnII | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 498, 1209 |
| EarI | CTCTTC | 3 cut(s) | 40, 498, 1209 |
| Eco57I | CTGAAG | 5 cut(s) | 741, 1292, 1374, 1694, 1724 |
| EcoRII | CCWGG | 2 cut(s) | 383, 1450 |
| EcoT22I | ATGCAT | 2 cut(s) | 1476, 1594 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 423, 455 |
| FaqI | GGGAC | 1 cut(s) | 1662 |
| FauI | CCCGC | 1 cut(s) | 1240 |
| FauNDI | CATATG | 1 cut(s) | 1196 |
| FbaI | TGATCA | 1 cut(s) | 1606 |
| FblI | GTMKAC | 2 cut(s) | 423, 648 |
| Fnu4HI | GCNGC | 3 cut(s) | 119, 1122, 1757 |
| FokI | GGATG | 7 cut(s) | 76, 77, 222, 272, 539, 973, 1360 |
| Fsp4HI | GCNGC | 3 cut(s) | 119, 1122, 1757 |
| FspBI | CTAG | 7 cut(s) | 198, 782, 1421, 1524, 1550, 1652, 1761 |
| GluI | GCNGC | 3 cut(s) | 119, 1122, 1757 |
| GsaI | CCCAGC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 1 cut(s) | 413 |
| HaeIII | GGCC | 1 cut(s) | 542 |
| HapII | CCGG | 1 cut(s) | 77 |
| HincII | GTYRAC | 4 cut(s) | 85, 424, 816, 980 |
| HindII | GTYRAC | 4 cut(s) | 85, 424, 816, 980 |
| HindIII | AAGCTT | 1 cut(s) | 1706 |
| HinfI | GANTC | 8 cut(s) | 305, 388, 397, 506, 663, 1110, 1541, 1567 |
| HpaII | CCGG | 1 cut(s) | 77 |
| HphI | GGTGA | 2 cut(s) | 1523, 1763 |
| Hpy166II | GTNNAC | 6 cut(s) | 85, 424, 649, 816, 980, 1842 |
| Hpy188I | TCNGA | 7 cut(s) | 95, 191, 706, 760, 1000, 1272, 1400 |
| Hpy8I | GTNNAC | 6 cut(s) | 85, 424, 649, 816, 980, 1842 |
| Hpy99I | CGWCG | 1 cut(s) | 428 |
| HpyAV | CCTTC | 3 cut(s) | 516, 938, 980 |
| HpyCH4III | ACNGT | 3 cut(s) | 274, 859, 1292 |
| HpyCH4IV | ACGT | 4 cut(s) | 812, 937, 1147, 1675 |
| HpyCH4V | TGCA | 8 cut(s) | 173, 288, 957, 991, 1058, 1124, 1474, 1592 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 220, 1569, 1789 |
| HpyF3I | CTNAG | 6 cut(s) | 188, 999, 1492, 1684, 1787, 1795 |
| HpySE526I | ACGT | 4 cut(s) | 812, 937, 1147, 1675 |
| KpnI | GGTACC | 1 cut(s) | 969 |
| Ksp22I | TGATCA | 1 cut(s) | 1606 |
| Kzo9I | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| LmnI | GCTCC | 2 cut(s) | 23, 126 |
| Lsp1109I | GCAGC | 3 cut(s) | 105, 1108, 1743 |
| LweI | GCATC | 3 cut(s) | 160, 1601, 1792 |
| MabI | ACCWGGT | 1 cut(s) | 1450 |
| MaeI | CTAG | 7 cut(s) | 198, 782, 1421, 1524, 1550, 1652, 1761 |
| MaeII | ACGT | 4 cut(s) | 812, 937, 1147, 1675 |
| MaeIII | GTNAC | 5 cut(s) | 751, 767, 928, 1051, 1824 |
| MalI | GATC | 9 cut(s) | 780, 879, 923, 1062, 1140, 1332, 1359, 1419, 1608 |
| MbiI | CCGCTC | 1 cut(s) | 1235 |
| MboI | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| MfeI | CAATTG | 2 cut(s) | 600, 1386 |
| MflI | RGATCY | 6 cut(s) | 778, 877, 1060, 1138, 1330, 1357 |
| MhlI | GDGCHC | 1 cut(s) | 1728 |
| MlyI | GAGTC | 5 cut(s) | 515, 672, 1104, 1535, 1576 |
| MmeI | TCCRAC | 3 cut(s) | 237, 1378, 1509 |
| MnlI | CCTC | 9 cut(s) | 169, 445, 455, 532, 899, 994, 1040, 1272, 1314 |
| Mph1103I | ATGCAT | 2 cut(s) | 1476, 1594 |
| MseI | TTAA | 8 cut(s) | 138, 153, 216, 225, 798, 1320, 1718, 1818 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 77 |
| MspR9I | CCNGG | 2 cut(s) | 385, 1452 |
| MunI | CAATTG | 2 cut(s) | 600, 1386 |
| Mva1269I | GAATGC | 1 cut(s) | 1594 |
| MvaI | CCWGG | 2 cut(s) | 385, 1452 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 220, 1569, 1789 |
| NdeI | CATATG | 1 cut(s) | 1196 |
| NdeII | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| NlaIV | GGNNCC | 2 cut(s) | 381, 967 |
| NmuCI | GTSAC | 2 cut(s) | 751, 928 |
| NsiI | ATGCAT | 2 cut(s) | 1476, 1594 |
| NspI | RCATGY | 4 cut(s) | 957, 1034, 1448, 1804 |
| PaeI | GCATGC | 1 cut(s) | 957 |
| PagI | TCATGA | 1 cut(s) | 358 |
| PciI | ACATGT | 2 cut(s) | 1444, 1800 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 651 |
| PctI | GAATGC | 1 cut(s) | 1594 |
| PfeI | GAWTC | 3 cut(s) | 305, 388, 397 |
| PflFI | GACNNNGTC | 1 cut(s) | 662 |
| PkrI | GCNGC | 3 cut(s) | 120, 1123, 1758 |
| PleI | GAGTC | 5 cut(s) | 514, 671, 1104, 1535, 1575 |
| PpsI | GAGTC | 5 cut(s) | 514, 671, 1104, 1535, 1575 |
| Ppu21I | YACGTR | 1 cut(s) | 938 |
| PscI | ACATGT | 2 cut(s) | 1444, 1800 |
| PshAI | GACNNNNGTC | 1 cut(s) | 372 |
| Psp6I | CCWGG | 2 cut(s) | 383, 1450 |
| PspFI | CCCAGC | 1 cut(s) | 113 |
| PspGI | CCWGG | 2 cut(s) | 383, 1450 |
| PspN4I | GGNNCC | 2 cut(s) | 381, 967 |
| PstI | CTGCAG | 1 cut(s) | 1060 |
| PsuI | RGATCY | 6 cut(s) | 778, 877, 1060, 1138, 1330, 1357 |
| PsyI | GACNNNGTC | 1 cut(s) | 662 |
| RsaI | GTAC | 5 cut(s) | 333, 967, 1449, 1742, 1843 |
| RsaNI | GTAC | 5 cut(s) | 332, 966, 1448, 1741, 1842 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SalI | GTCGAC | 1 cut(s) | 422 |
| SaqAI | TTAA | 8 cut(s) | 138, 153, 216, 225, 798, 1320, 1718, 1818 |
| SatI | GCNGC | 3 cut(s) | 119, 1122, 1757 |
| Sau3AI | GATC | 9 cut(s) | 778, 877, 921, 1060, 1138, 1330, 1357, 1417, 1606 |
| SchI | GAGTC | 5 cut(s) | 515, 672, 1104, 1535, 1576 |
| ScrFI | CCNGG | 2 cut(s) | 385, 1452 |
| SduI | GDGCHC | 1 cut(s) | 1728 |
| SexAI | ACCWGGT | 1 cut(s) | 1450 |
| SfaNI | GCATC | 3 cut(s) | 160, 1601, 1792 |
| SfcI | CTRYAG | 3 cut(s) | 273, 410, 1056 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 2 cut(s) | 883, 1305 |
| SmoI | CTYRAG | 2 cut(s) | 883, 1305 |
| SphI | GCATGC | 1 cut(s) | 957 |
| SsiI | CCGC | 3 cut(s) | 111, 1233, 1598 |
| SspI | AATATT | 2 cut(s) | 1182, 1747 |
| SspMI | CTAG | 7 cut(s) | 198, 782, 1421, 1524, 1550, 1652, 1761 |
| StyD4I | CCNGG | 2 cut(s) | 383, 1450 |
| TaaI | ACNGT | 3 cut(s) | 274, 859, 1292 |
| TaiI | ACGT | 4 cut(s) | 815, 940, 1150, 1678 |
| TaqI | TCGA | 4 cut(s) | 165, 423, 1376, 1814 |
| TatI | WGTACW | 1 cut(s) | 1841 |
| TfiI | GAWTC | 3 cut(s) | 305, 388, 397 |
| Tru1I | TTAA | 8 cut(s) | 138, 153, 216, 225, 798, 1320, 1718, 1818 |
| Tru9I | TTAA | 8 cut(s) | 138, 153, 216, 225, 798, 1320, 1718, 1818 |
| TscAI | CASTG | 1 cut(s) | 1718 |
| TseFI | GTSAC | 2 cut(s) | 751, 928 |
| TseI | GCWGC | 3 cut(s) | 118, 1121, 1756 |
| Tsp45I | GTSAC | 2 cut(s) | 751, 928 |
| TspRI | CASTG | 1 cut(s) | 1718 |
| Tth111I | GACNNNGTC | 1 cut(s) | 662 |
| XapI | RAATTY | 3 cut(s) | 710, 827, 1462 |
| XbaI | TCTAGA | 1 cut(s) | 781 |
| XceI | RCATGY | 4 cut(s) | 957, 1034, 1448, 1804 |
| XmiI | GTMKAC | 2 cut(s) | 423, 648 |
| XspI | CTAG | 7 cut(s) | 198, 782, 1421, 1524, 1550, 1652, 1761 |
| Zsp2I | ATGCAT | 2 cut(s) | 1476, 1594 |