Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0010666

Physical Location & Seq

Genomic Coordinates Forward (+)

65768420 .. 65773301

Gene Structure 4882 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG382400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGGTTATGGAAACTCAAGATCTGTAAGATTTCAAGATGATGTTGAATTAGCAAAGCTACCTTCAGTCAATGGAGTTGGTGATGTTAAGTTCAAGTACAAGATTGATGGGACTCAAGTACCAGAGACCAGCACCAAGAGAATTGATAAGGAGCTGCCTGGAAAGTCTGGGAAATCTTTAAAAGCTAAAGTACTGTCCAGAGTCTTTTCTGAGGACTATGAGAGTGAGAAGAAGAAGATATTAGATCCTCGAGGACCAACAATTCACCGATGGAACAAGATTTTCCTAGTAACCTGTTTGATTTCTTTGTTCGTAGACCCTTTATTCTTTTACTTGCCAGAGGTCAGAGACCAAGTCTGTATTGATATTGGAATACCACTTGAAGTTGTTCTTACCATTCTTCGATCAGTGGCGGATGTTTTTTACATAATTCAGATTTATATTAGATTTCGTAAAGCATATATTGCACCTTCCTCTCGAGTATTTGGGAGAGGAGAGCTTGTTATAGACTCTTCCAAGATCGCATTTAAGTACCTCCGGTTTGGTTTCTGGATTGACCTCATTGCTGCACTGCCACTTCCTCAGGTACTAATTTGGATTGTAATCCCCAACCTTAATGGTTCAACAATGACAAACACCAAAAACGTTCTTCGGTTCATCATAATCTTTCAGTACATACCAAGGCTCTTTCTTATATTTCCGCTATCGTCACAAATTGTTAAGGCCACTGGTGTTGTGACAGAGACAGCATGGGCTGGGGCTGCATATAACCTGATGTTATACATGTTGGCAAGTCATGTTTTAGGAGCTTGTTGGTACCTTCTTTCAATTGAGCGGCAAGAAGCATGCTGGAGACAAGTTTGTGAGGAAGACAGTACAAATTGTAAATATGGTTATTTAGATTGCAAAATGGCGCAAGACCCCAAAAGGTTCTCCTGGTTCCAGTCAAGTAATGTCACACACCGATGTGATCCAGAAGAAAACTCTTATGAATTTGGTATATACGGTGATGCGGTAACATATGGTGTTACGACCTCATCATTCTTCAACAAGTACTTTTACTGTCTTTGGTGGGGTCTAAGAAACCTCAGTTCCTTGGGGCAGAATCTTTCGACCAGCACTTATGTCGGAGAAATAATCTTTGCCATTATTATTGCGACTCTTGGACTAGTTCTCTTTGCTTTGCTGATCGGTAATATGCAAACCTACCTTCAATCCACAACTGTCCGACTAGAAGAGTGGAGGATCAAGAGAACTGATACAGAGCAATGGATGCGTCACAGGCAGCTGCCTCCAGAATTAAGACTGTCTGTAAGGAAGTATGATCAGTATAAGTGGCTGGCTACTCGAGGAGTCGATGAAGAAAGTCTTCTTAAAGGCCTACCTTTGGATCTTCGAAGAGACATCAAACGCCACCTTTGCCTTGACCTTGTTCGTCGGGTCCCTATGTTTGATCAAATGGACGAAAGAATGCTAGATGCAATATGTGACAGGCTTAAACCTGCTTTGGGTACTGAAGGCACATTTCTAGTGCGCGAAGGTGATCCTGTCAATGAAATGCTCTTCATAGTTCGAGGCCACCTTGATTCTTACACCACCAATGGTGGCCGGACAGGATTTTTCAACTCATGTCATCTTGGCCCTGGTGACTTCTGTGGAGAAGAACTATTGACGTGGGCCTTAGACCCTCGTCCGAGTGTCATTCTCCCATCTTCAACGCGCACAGTCAAAGCGCTTTCTGAAGTAGAAGCATTTGCTCTAGTAGCAGAGGACTTGAAATTTGTTGCATCACAGTTTAGGAGACTTCATAGCAAGCAACTTAGGCACAAGTTCCGGTTCTATTCACACCAGTGGCGGTTATGGTCTGCATGTTTCATACAGGCTGCTTGGCGTCGGTATAAGAAGCGCAGGGAGGCAGCAGAGCTCAAGGCTAAAGAAAACCACACGGCCGCTGCACCTGCGCAACCCCCACCCATCTCAGGCTTGGCTACTTATGCTACAATGCTTGCTGCAAGTACTAGGAGGGGTGCCAAGAAGCATCCTGGGTCAGACTCTGGGGTTGTAAGTTCATTACAGAAGCCAGCAGAGCCTGATTTCTCTGTTGTTGATGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0008150 GO:0008324 GO:0009877 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0031965 GO:0031967 GO:0031975 GO:0034220 GO:0036377 GO:0042391 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

705

Amino Acids

80.61

Weight (kDa)

9.09

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	91 - 410	2.9e-20	Ion transport protein
cNMP_binding	PF00027	506 - 593	6.5e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28260 AT2G28260
fragaria_vesca	FvH4_3g31830 FvH4_3g31830 FvH4_3g31830
malus_domestica	MD03G1120600.v1.1 MD11G1139100.v1.1
prunus_persica	Prupe.6G104000_v2.0.a1 Prupe.6G104000_v2.0.a1
pyrus_communis	pycom11g11500
rosa_chinensis	RchiOBHm_Chr5g0058601
rosa_laevigata	RLG00000035235
rosa_multiflora	Rmu_sc0000367.1_g000155
rosa_roxburghii	Rroxscaffold_1G00021860
rosa_rugosa	Rorug05G0316200 Rorug05G0316300 Rorug05G0316400
rosa_samantha	Rh5AG382400 Rh5BG394200
rosa_wichuraiana	Rw5G036010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1966
AbsI	CCTCGAGG	1 cut(s)	249
Acc16I	TGCGCA	1 cut(s)	1962
Acc36I	ACCTGC	2 cut(s)	1510, 1966
Acc65I	GGTACC	1 cut(s)	816
AccB1I	GGYRCC	2 cut(s)	816, 2027
AccBSI	CCGCTC	1 cut(s)	835
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	2 cut(s)	1536, 1720
AciI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
AclI	AACGTT	1 cut(s)	645
AclWI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
AcoI	YGGCCR	2 cut(s)	1606, 1947
AcsI	RAATTY	2 cut(s)	992, 1778
AcuI	CTGAAG	3 cut(s)	48, 1536, 1761
AcyI	GRCGYC	1 cut(s)	1891
AfeI	AGCGCT	1 cut(s)	1734
AfiI	CCNNNNNNNGG	3 cut(s)	1387, 1508, 1979
AflIII	ACRYGT	1 cut(s)	783
AhlI	ACTAGT	1 cut(s)	1168
AjiI	CACGTC	1 cut(s)	1674
AjnI	CCWGG	4 cut(s)	157, 935, 1642, 2041
AleI	CACNNNNGTG	2 cut(s)	966, 1849
AluBI	AGCT	7 cut(s)	58, 154, 185, 499, 809, 1288, 1924
AluI	AGCT	7 cut(s)	58, 154, 185, 499, 809, 1288, 1924
Alw21I	GWGCWC	1 cut(s)	1926
Alw26I	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
AlwI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
AlwNI	CAGNNNCTG	2 cut(s)	2054, 2090
Ama87I	CYCGRG	3 cut(s)	249, 477, 1347
Aor51HI	AGCGCT	1 cut(s)	1734
AoxI	GGCC	7 cut(s)	723, 1378, 1576, 1606, 1639, 1677, 1947
ApeKI	GCWGC	9 cut(s)	154, 566, 761, 1285, 1288, 1883, 1916, 1952, 2009
ApoI	RAATTY	2 cut(s)	992, 1778
ArsI	GACNNNNNNTTYG	2 cut(s)	1763, 1795
Asp700I	GAANNNNTTC	2 cut(s)	387, 1368
Asp718I	GGTACC	1 cut(s)	816
AspLEI	GCGC	6 cut(s)	916, 1536, 1722, 1735, 1908, 1963
AspS9I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
AsuHPI	GGTGA	5 cut(s)	92, 257, 1019, 1553, 1658
AsuII	TTCGAA	1 cut(s)	1396
AvaI	CYCGRG	3 cut(s)	249, 477, 1347
AvaII	GGWCC	2 cut(s)	254, 1441
AxyI	CCTNAGG	1 cut(s)	582
BaeI	ACNNNNGTAYC	2 cut(s)	102, 135
BanI	GGYRCC	2 cut(s)	816, 2027
BanII	GRGCYC	1 cut(s)	1926
BbsI	GAAGAC	2 cut(s)	876, 1361
Bbv12I	GWGCWC	1 cut(s)	1926
BbvI	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BccI	CCATC	4 cut(s)	101, 264, 1717, 1982
BceAI	ACGGC	1 cut(s)	1962
BcgI	CGANNNNNNTGC	2 cut(s)	1108, 1142
BciT130I	CCWGG	4 cut(s)	159, 937, 1644, 2043
BclI	TGATCA	2 cut(s)	1324, 1453
BcoDI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BcuI	ACTAGT	1 cut(s)	1168
BfaI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
BfoI	RGCGCY	1 cut(s)	1736
BfuAI	ACCTGC	2 cut(s)	1510, 1966
BglII	AGATCT	1 cut(s)	20
BmcAI	AGTACT	3 cut(s)	192, 1055, 2017
Bme1390I	CCNGG	4 cut(s)	159, 937, 1644, 2043
Bme18I	GGWCC	2 cut(s)	254, 1441
BmeT110I	CYCGRG	3 cut(s)	249, 477, 1347
BmgBI	CACGTC	1 cut(s)	1674
BmgT120I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
BmiI	GGNNCC	5 cut(s)	818, 941, 1442, 1443, 2029
BmrFI	CCNGG	4 cut(s)	159, 937, 1644, 2043
BmsI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
BoxI	GACNNNNGTC	1 cut(s)	1689
BpiI	GAAGAC	2 cut(s)	876, 1361
BpmI	CTGGAG	2 cut(s)	871, 1278
Bpu14I	TTCGAA	1 cut(s)	1396
BpuEI	CTTGAG	2 cut(s)	99, 1910
BsaBI	GATNNNNATC	1 cut(s)	602
BsaHI	GRCGYC	1 cut(s)	1891
BsaI	GGTCTC	2 cut(s)	119, 342
BsaJI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BsaWI	WCCGGW	2 cut(s)	537, 1833
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	3 cut(s)	1387, 1508, 1979
Bse1I	ACTGG	3 cut(s)	733, 943, 1849
Bse21I	CCTNAGG	1 cut(s)	582
Bse3DI	GCAATG	2 cut(s)	561, 1274
Bse8I	GATNNNNATC	1 cut(s)	602
BseBI	CCWGG	4 cut(s)	159, 937, 1644, 2043
BseDI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BseGI	GGATG	3 cut(s)	421, 1278, 2038
BseJI	GATNNNNATC	1 cut(s)	602
BseLI	CCNNNNNNNGG	3 cut(s)	1387, 1508, 1979
BseMI	GCAATG	2 cut(s)	561, 1274
BseMII	CTCAG	4 cut(s)	201, 596, 1102, 1992
BseNI	ACTGG	3 cut(s)	733, 943, 1849
BseRI	GAGGAG	2 cut(s)	507, 1365
BseX3I	CGGCCG	1 cut(s)	1947
BseXI	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BseYI	CCCAGC	1 cut(s)	755
BsgI	GTGCAG	2 cut(s)	552, 1938
Bsh1236I	CGCG	2 cut(s)	1536, 1720
Bsh1285I	CGRYCG	1 cut(s)	1950
BshFI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BshNI	GGYRCC	2 cut(s)	816, 2027
BsiEI	CGRYCG	1 cut(s)	1950
BsiHKAI	GWGCWC	1 cut(s)	1926
BsiHKCI	CYCGRG	3 cut(s)	249, 477, 1347
BsiSI	CCGG	3 cut(s)	538, 1609, 1834
BslFI	GGGAC	2 cut(s)	124, 1427
BslI	CCNNNNNNNGG	3 cut(s)	1387, 1508, 1979
BsmAI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BsmFI	GGGAC	2 cut(s)	124, 1427
BsmI	GAATGC	1 cut(s)	1476
BsnI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
Bso31I	GGTCTC	2 cut(s)	119, 342
BsoBI	CYCGRG	3 cut(s)	249, 477, 1347
Bsp119I	TTCGAA	1 cut(s)	1396
Bsp1286I	GDGCHC	1 cut(s)	1926
BspACI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
BspANI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BspCNI	CTCAG	4 cut(s)	202, 595, 1101, 1991
BspFNI	CGCG	2 cut(s)	1536, 1720
BspLI	GGNNCC	5 cut(s)	818, 941, 1442, 1443, 2029
BspMI	ACCTGC	2 cut(s)	1510, 1966
BspPI	GGATC	5 cut(s)	239, 965, 1253, 1398, 1538
BspQI	GCTCTTC	1 cut(s)	1568
BspT104I	TTCGAA	1 cut(s)	1396
BspT107I	GGYRCC	2 cut(s)	816, 2027
BspTNI	GGTCTC	2 cut(s)	119, 342
BsrBI	CCGCTC	1 cut(s)	835
BsrDI	GCAATG	2 cut(s)	561, 1274
BsrI	ACTGG	3 cut(s)	733, 943, 1849
BssECI	CCNNGG	4 cut(s)	680, 1095, 1642, 2042
BssNI	GRCGYC	1 cut(s)	1891
BssT1I	CCWWGG	2 cut(s)	680, 1095
Bst2UI	CCWGG	4 cut(s)	159, 937, 1644, 2043
Bst4CI	ACNGT	8 cut(s)	195, 875, 1007, 1064, 1225, 1308, 1726, 1794
Bst6I	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
BstACI	GRCGYC	1 cut(s)	1891
BstAPI	GCANNNNNTGC	2 cut(s)	464, 1273
BstBI	TTCGAA	1 cut(s)	1396
BstC8I	GCNNGC	5 cut(s)	847, 1341, 1814, 2007, 2082
BstDEI	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
BstF5I	GGATG	3 cut(s)	421, 1278, 2038
BstFNI	CGCG	2 cut(s)	1536, 1720
BstH2I	RGCGCY	1 cut(s)	1736
BstHHI	GCGC	6 cut(s)	916, 1536, 1722, 1735, 1908, 1963
BstMAI	GTCTC	6 cut(s)	119, 342, 737, 847, 1395, 1795
BstMCI	CGRYCG	1 cut(s)	1950
BstNI	CCWGG	4 cut(s)	159, 937, 1644, 2043
BstNSI	RCATGY	3 cut(s)	787, 849, 1872
BstPAI	GACNNNNGTC	1 cut(s)	1689
BstSCI	CCNGG	4 cut(s)	157, 935, 1642, 2041
BstUI	CGCG	2 cut(s)	1536, 1720
BstV1I	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
BstV2I	GAAGAC	2 cut(s)	876, 1361
BstX2I	RGATCY	3 cut(s)	20, 244, 1390
BstYI	RGATCY	3 cut(s)	20, 244, 1390
BstZI	CGGCCG	1 cut(s)	1947
Bsu36I	CCTNAGG	1 cut(s)	582
BsuRI	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
BtrI	CACGTC	1 cut(s)	1674
BtsCI	GGATG	3 cut(s)	421, 1278, 2038
BtsI	GCAGTG	1 cut(s)	569
BtsIMutI	CAGTG	4 cut(s)	414, 569, 726, 1856
BveI	ACCTGC	2 cut(s)	1510, 1966
Cac8I	GCNNGC	5 cut(s)	847, 1341, 1814, 2007, 2082
CaiI	CAGNNNCTG	2 cut(s)	2054, 2090
CfoI	GCGC	6 cut(s)	916, 1536, 1722, 1735, 1908, 1963
Cfr13I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
CseI	GACGC	2 cut(s)	1265, 1880
CspCI	CAANNNNNGTGG	2 cut(s)	715, 750
CviAII	CATG	6 cut(s)	750, 784, 797, 846, 1629, 1869
DdeI	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
DraI	TTTAAA	1 cut(s)	180
EaeI	YGGCCR	2 cut(s)	1606, 1947
EagI	CGGCCG	1 cut(s)	1947
Eam1104I	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
EarI	CTCTTC	4 cut(s)	517, 1230, 1393, 1568
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	1924
EclXI	CGGCCG	1 cut(s)	1947
Eco130I	CCWWGG	2 cut(s)	680, 1095
Eco147I	AGGCCT	1 cut(s)	1380
Eco24I	GRGCYC	1 cut(s)	1926
Eco31I	GGTCTC	2 cut(s)	119, 342
Eco47I	GGWCC	2 cut(s)	254, 1441
Eco47III	AGCGCT	1 cut(s)	1734
Eco52I	CGGCCG	1 cut(s)	1947
Eco53kI	GAGCTC	1 cut(s)	1924
Eco57I	CTGAAG	3 cut(s)	48, 1536, 1761
Eco81I	CCTNAGG	1 cut(s)	582
Eco88I	CYCGRG	3 cut(s)	249, 477, 1347
EcoICRI	GAGCTC	1 cut(s)	1924
EcoO109I	RGGNCCY	1 cut(s)	1441
EcoRII	CCWGG	4 cut(s)	157, 935, 1642, 2041
EcoT14I	CCWWGG	2 cut(s)	680, 1095
EcoT38I	GRGCYC	1 cut(s)	1926
ErhI	CCWWGG	2 cut(s)	680, 1095
FaeI	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
FalI	AAGNNNNNCTT	4 cut(s)	375, 407, 1353, 1385
FaqI	GGGAC	2 cut(s)	124, 1427
FatI	CATG	6 cut(s)	749, 783, 796, 845, 1628, 1868
FauNDI	CATATG	1 cut(s)	1021
FbaI	TGATCA	2 cut(s)	1324, 1453
FblI	GTMKAC	1 cut(s)	315
FokI	GGATG	3 cut(s)	428, 1285, 2025
FriOI	GRGCYC	1 cut(s)	1926
FspBI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
FspI	TGCGCA	1 cut(s)	1962
GlaI	GCGC	6 cut(s)	915, 1535, 1721, 1734, 1907, 1962
GsaI	CCCAGC	1 cut(s)	759
GsuI	CTGGAG	2 cut(s)	871, 1278
HaeII	RGCGCY	1 cut(s)	1736
HaeIII	GGCC	7 cut(s)	725, 1380, 1578, 1608, 1641, 1679, 1949
HapII	CCGG	3 cut(s)	538, 1609, 1834
HgaI	GACGC	2 cut(s)	1265, 1880
HhaI	GCGC	6 cut(s)	916, 1536, 1722, 1735, 1908, 1963
Hin1I	GRCGYC	1 cut(s)	1891
Hin1II	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
Hin6I	GCGC	6 cut(s)	914, 1534, 1720, 1733, 1906, 1961
HinP1I	GCGC	6 cut(s)	914, 1534, 1720, 1733, 1906, 1961
HinfI	GANTC	8 cut(s)	112, 201, 509, 1105, 1159, 1353, 1586, 2051
HpaII	CCGG	3 cut(s)	538, 1609, 1834
HphI	GGTGA	5 cut(s)	92, 257, 1019, 1553, 1658
Hpy166II	GTNNAC	1 cut(s)	316
Hpy188I	TCNGA	8 cut(s)	211, 347, 435, 1130, 1229, 1695, 1741, 2050
Hpy188III	TCNNGA	8 cut(s)	18, 35, 198, 477, 550, 974, 1249, 1295
Hpy8I	GTNNAC	1 cut(s)	316
Hpy99I	CGWCG	2 cut(s)	1440, 1896
HpyAV	CCTTC	6 cut(s)	72, 480, 830, 1220, 1511, 1532
HpyCH4III	ACNGT	8 cut(s)	195, 875, 1007, 1064, 1225, 1308, 1726, 1794
HpyCH4IV	ACGT	2 cut(s)	645, 1673
HpyF3I	CTNAG	7 cut(s)	210, 582, 1079, 1088, 1681, 1820, 1978
HpySE526I	ACGT	2 cut(s)	645, 1673
Hsp92I	GRCGYC	1 cut(s)	1891
Hsp92II	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
HspAI	GCGC	6 cut(s)	914, 1534, 1720, 1733, 1906, 1961
KflI	GGGWCCC	1 cut(s)	1441
KpnI	GGTACC	1 cut(s)	820
Ksp22I	TGATCA	2 cut(s)	1324, 1453
LguI	GCTCTTC	1 cut(s)	1568
LmnI	GCTCC	2 cut(s)	151, 806
Lsp1109I	GCAGC	9 cut(s)	141, 553, 748, 1275, 1297, 1870, 1928, 1939, 1996
LweI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
MaeI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
MaeII	ACGT	2 cut(s)	645, 1673
MaeIII	GTNAC	9 cut(s)	289, 708, 736, 955, 1015, 1027, 1277, 1487, 1646
MbiI	CCGCTC	1 cut(s)	835
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	3 cut(s)	20, 244, 1390
MhlI	GDGCHC	1 cut(s)	1926
MlyI	GAGTC	6 cut(s)	106, 210, 503, 1153, 1362, 2045
MmeI	TCCRAC	2 cut(s)	1108, 1252
MroXI	GAANNNNTTC	2 cut(s)	387, 1368
MseI	TTAA	8 cut(s)	87, 179, 528, 615, 720, 1301, 1374, 1497
MslI	CAYNNNNRTG	3 cut(s)	964, 966, 1849
MspA1I	CMGCKG	2 cut(s)	1288, 1952
MspI	CCGG	3 cut(s)	538, 1609, 1834
MspR9I	CCNGG	4 cut(s)	159, 937, 1644, 2043
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	1 cut(s)	1476
MvaI	CCWGG	4 cut(s)	159, 937, 1644, 2043
MvnI	CGCG	2 cut(s)	1536, 1720
NdeI	CATATG	1 cut(s)	1021
NlaIII	CATG	6 cut(s)	753, 787, 800, 849, 1632, 1872
NlaIV	GGNNCC	5 cut(s)	818, 941, 1442, 1443, 2029
NmuCI	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
NsbI	TGCGCA	1 cut(s)	1962
NspI	RCATGY	3 cut(s)	787, 849, 1872
NspV	TTCGAA	1 cut(s)	1396
OliI	CACNNNNGTG	2 cut(s)	966, 1849
PaeI	GCATGC	1 cut(s)	849
PaeR7I	CTCGAG	3 cut(s)	249, 477, 1347
PaqCI	CACCTGC	1 cut(s)	1966
PceI	AGGCCT	1 cut(s)	1380
PciI	ACATGT	1 cut(s)	783
PciSI	GCTCTTC	1 cut(s)	1568
PctI	GAATGC	1 cut(s)	1476
PdmI	GAANNNNTTC	2 cut(s)	387, 1368
PfeI	GAWTC	2 cut(s)	1105, 1586
PflFI	GACNNNGTC	1 cut(s)	353
PleI	GAGTC	6 cut(s)	106, 209, 503, 1153, 1361, 2045
PpsI	GAGTC	6 cut(s)	106, 209, 503, 1153, 1361, 2045
PpuMI	RGGWCCY	1 cut(s)	1441
PscI	ACATGT	1 cut(s)	783
PshAI	GACNNNNGTC	1 cut(s)	1689
Psp124BI	GAGCTC	1 cut(s)	1926
Psp1406I	AACGTT	1 cut(s)	645
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	4 cut(s)	157, 935, 1642, 2041
PspFI	CCCAGC	1 cut(s)	755
PspGI	CCWGG	4 cut(s)	157, 935, 1642, 2041
PspN4I	GGNNCC	5 cut(s)	818, 941, 1442, 1443, 2029
PspPI	GGNCC	4 cut(s)	254, 1441, 1640, 1677
PspPPI	RGGWCCY	1 cut(s)	1441
PspXI	VCTCGAGB	2 cut(s)	249, 1347
PstNI	CAGNNNCTG	2 cut(s)	2054, 2090
PsuI	RGATCY	3 cut(s)	20, 244, 1390
PsyI	GACNNNGTC	1 cut(s)	353
PvuII	CAGCTG	1 cut(s)	1288
RseI	CAYNNNNRTG	3 cut(s)	964, 966, 1849
SacI	GAGCTC	1 cut(s)	1926
SapI	GCTCTTC	1 cut(s)	1568
SaqAI	TTAA	8 cut(s)	87, 179, 528, 615, 720, 1301, 1374, 1497
Sau96I	GGNCC	4 cut(s)	254, 1441, 1640, 1677
ScaI	AGTACT	3 cut(s)	192, 1055, 2017
SchI	GAGTC	6 cut(s)	106, 210, 503, 1153, 1362, 2045
ScrFI	CCNGG	4 cut(s)	159, 937, 1644, 2043
SduI	GDGCHC	1 cut(s)	1926
SfaNI	GCATC	5 cut(s)	1000, 1263, 1468, 1796, 2047
Sfr274I	CTCGAG	3 cut(s)	249, 477, 1347
SfuI	TTCGAA	1 cut(s)	1396
SinI	GGWCC	2 cut(s)	254, 1441
SlaI	CTCGAG	3 cut(s)	249, 477, 1347
SmiMI	CAYNNNNRTG	3 cut(s)	964, 966, 1849
SmlI	CTYRAG	6 cut(s)	16, 114, 249, 477, 1347, 1925
SmoI	CTYRAG	6 cut(s)	16, 114, 249, 477, 1347, 1925
SpeI	ACTAGT	1 cut(s)	1168
SphI	GCATGC	1 cut(s)	849
SseBI	AGGCCT	1 cut(s)	1380
SsiI	CCGC	6 cut(s)	413, 701, 835, 1013, 1855, 1950
SspMI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
SstI	GAGCTC	1 cut(s)	1926
StuI	AGGCCT	1 cut(s)	1380
StyD4I	CCNGG	4 cut(s)	157, 935, 1642, 2041
StyI	CCWWGG	2 cut(s)	680, 1095
TaaI	ACNGT	8 cut(s)	195, 875, 1007, 1064, 1225, 1308, 1726, 1794
TaiI	ACGT	2 cut(s)	648, 1676
TaqI	TCGA	8 cut(s)	250, 403, 478, 1112, 1348, 1356, 1396, 1573
TatI	WGTACW	6 cut(s)	96, 190, 672, 875, 1053, 2015
TauI	GCSGC	2 cut(s)	838, 1952
TfiI	GAWTC	2 cut(s)	1105, 1586
Tru1I	TTAA	8 cut(s)	87, 179, 528, 615, 720, 1301, 1374, 1497
Tru9I	TTAA	8 cut(s)	87, 179, 528, 615, 720, 1301, 1374, 1497
TscAI	CASTG	4 cut(s)	414, 576, 733, 1856
TseFI	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
TseI	GCWGC	9 cut(s)	154, 566, 761, 1285, 1288, 1883, 1916, 1952, 2009
Tsp45I	GTSAC	6 cut(s)	708, 736, 955, 1277, 1487, 1646
TspDTI	ATGAA	8 cut(s)	646, 1005, 1374, 1555, 1569, 1796, 1864, 2058
TspRI	CASTG	4 cut(s)	414, 576, 733, 1856
Tth111I	GACNNNGTC	1 cut(s)	353
VpaK11BI	GGWCC	2 cut(s)	254, 1441
XapI	RAATTY	2 cut(s)	992, 1778
XceI	RCATGY	3 cut(s)	787, 849, 1872
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1981
XhoI	CTCGAG	3 cut(s)	249, 477, 1347
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	2 cut(s)	387, 1368
XspI	CTAG	7 cut(s)	287, 1169, 1232, 1475, 1529, 1760, 2019
ZrmI	AGTACT	3 cut(s)	192, 1055, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.