MD11G1222200.v1.1

MOS2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
32558872 .. 32560209
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1222200.v1.1.491

Sequence Viewer

Length: 1338 bp
ATGAAACTCTCCTTCTCTCTCCCTCCCAAATCCTCCTCTAAGTCAAACCCTAAACGCAACCCCTCCTCCGGCACCGCCAACTTCGACAACGGCACCGGAAACAACGCAAACGACGCCGCTTCCAAGCACTTCGTCAGCGAATTCGATGCTTCAAAACCCCTATCCGCCGACCCTAAAGCCCGCGTGATCGCCCCGATCCCCAACGAATGGCGGCCCCACAAGAAGATGAAGAACATGGAGCTCCCCATCACCGAGCCCAACGGCCACGAGCTCCAGTTCGAGGTCGAGACGCTCTCGGTCAACGACGACCCCGACGCCAAGATTTCGTACGGTCTCAATCTTCGGGAGAAATCGGAATCCGAGAATCGGGAGAGGTTGGGGAACGATGAGCGGCCGAGATCGAGAGGCGTGGAGGATACGCTGCTGCAGAAGTTTAAAGACGATTTGGAGCGGTTGTCGGATCATAGGGGGTTGGAGGAGTACGAAGAGATGCCGGTGGAGGGTTACGGCGAGGCGTTGCTTACCGGGTACGGGTGGTACCCGGGTAGAGGAATTGGGAAGAATGCGAAGGAAGATGTGAAAATTGTGGAGTATACTCGGAGTAGTGATAGGCACGGGTTAGGGTTTCTTGCAAATTCGAAAGAGAATTCGAAAGAGAAGGATAGAAAGAATTCGAAAGAGAAGGAGAAGAGGAAAGAAGGGGATGTGGGGAAGGAAGTTAGGATCGTTGCGGGTCGAGACTATGTGGGTTTGAGAGGTAGGATTTTGGAGAAACTGAGTAATGGGAAACTGGTTTTGAAACTGTTAAGTAAGAGCAAGGGGCAAGATGAAGAGGTAGTAAAAGTGAATGCGGGTGAAGTTGCGGAATTGGGTTCGAAAGAAGAAGAGAAGTGCTTGAGGAGATTGAATGAGACAAAAAGGAAAGTGGGTAGTGATAGTAAGCCGAGACAAGAGGAGCCGAGGGGTTATTCGACATGGCTTGCGAGGAACATTCGGGTCAGGGTTATTAGCAAGGACTTGAAAGGCGGGAAATTGTATTTGAGAAAAGGAGAGGTGATGGATGTTGTTGGACCCTACACCTGTGATATATCTATGGATGGGAATAGGGAGCTTGTGCAGGGGGTGTCCCAGGATTTTCTTGAGACTGCCCTGCCAAGGCGTGGAGGACCCGTTCTTGTGTTATCTGGGAAGCATAAGGGGGTCTATGGTAGTCTTGTGGAGAAGGATTCCGACAGAGAGACTGGTGTTGTCAAGGATTCCGATACCCATGCCTTGCTCAATGTGGGTCTTGAGCAGATTGCCGAGTTTACTGGTGATCCCAACGATCTTGGATATTGA

Protein Analysis

446

Amino Acids

49.64

Weight (kDa)

8.18

Isoelectric Point (pI)

29.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-patch_2 PF12656 154 - 209 1.3e-17 G-patch domain
GPKOW_C PF25088 331 - 438 1.8e-35 GPKOW C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 537
AccB1I GGYRCC 3 cut(s) 71, 92, 537
AccB7I CCANNNNNTGG 2 cut(s) 207, 1160
AccBSI CCGCTC 2 cut(s) 391, 451
AccI GTMKAC 1 cut(s) 593
AccII CGCG 1 cut(s) 183
AclWI GGATC 4 cut(s) 190, 468, 731, 1310
AcoI YGGCCR 2 cut(s) 262, 392
AcsI RAATTY 4 cut(s) 140, 634, 646, 670
AcyI GRCGYC 2 cut(s) 114, 315
AfaI GTAC 4 cut(s) 329, 482, 530, 539
AfiI CCNNNNNNNGG 9 cut(s) 68, 207, 280, 366, 500, 531, 548, 1155, 1160
AgsI TTSAA 4 cut(s) 153, 799, 907, 1021
AjnI CCWGG 1 cut(s) 1128
AloI GAACNNNNNNTCC 2 cut(s) 1155, 1187
AluBI AGCT 3 cut(s) 241, 271, 1111
AluI AGCT 3 cut(s) 241, 271, 1111
Alw21I GWGCWC 2 cut(s) 243, 273
Alw26I GTCTC 7 cut(s) 281, 338, 732, 905, 940, 1136, 1232
AlwI GGATC 4 cut(s) 190, 468, 731, 1310
Ama87I CYCGRG 1 cut(s) 541
AoxI GGCC 3 cut(s) 212, 262, 392
ApeKI GCWGC 2 cut(s) 421, 424
ApoI RAATTY 4 cut(s) 140, 634, 646, 670
Asp700I GAANNNNTTC 1 cut(s) 670
Asp718I GGTACC 1 cut(s) 537
AspS9I GGNCC 3 cut(s) 213, 1070, 1166
AsuC2I CCSGG 3 cut(s) 526, 542, 543
AsuHPI GGTGA 4 cut(s) 241, 866, 1066, 1325
AsuII TTCGAA 4 cut(s) 638, 650, 674, 875
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 2 cut(s) 1070, 1166
BaeI ACNNNNGTAYC 2 cut(s) 529, 562
BanI GGYRCC 3 cut(s) 71, 92, 537
BanII GRGCYC 3 cut(s) 243, 258, 273
BauI CACGAG 1 cut(s) 266
Bbv12I GWGCWC 2 cut(s) 243, 273
BbvI GCAGC 2 cut(s) 408, 411
BccI CCATC 3 cut(s) 254, 1051, 1091
BceAI ACGGC 3 cut(s) 106, 277, 523
BcgI CGANNNNNNTGC 4 cut(s) 128, 162, 1250, 1284
BciT130I CCWGG 1 cut(s) 1130
BciVI GTATCC 1 cut(s) 409
BcnI CCSGG 3 cut(s) 526, 542, 543
BcoDI GTCTC 7 cut(s) 281, 338, 732, 905, 940, 1136, 1232
BfmI CTRYAG 1 cut(s) 425
BfuI GTATCC 1 cut(s) 409
BisI GCNGC 5 cut(s) 117, 212, 392, 422, 425
BlsI GCNGC 5 cut(s) 118, 213, 393, 423, 426
Bme1390I CCNGG 4 cut(s) 526, 542, 543, 1130
Bme18I GGWCC 2 cut(s) 1070, 1166
BmeT110I CYCGRG 1 cut(s) 541
BmgT120I GGNCC 3 cut(s) 213, 1070, 1166
BmiI GGNNCC 7 cut(s) 73, 94, 215, 539, 957, 1072, 1168
BmrFI CCNGG 4 cut(s) 526, 542, 543, 1130
BmsI GCATC 2 cut(s) 136, 480
BplI GAGNNNNNCTC 2 cut(s) 278, 310
BpmI CTGGAG 1 cut(s) 257
Bpu14I TTCGAA 4 cut(s) 638, 650, 674, 875
BpuEI CTTGAG 3 cut(s) 916, 1160, 1310
BpuMI CCSGG 3 cut(s) 526, 542, 543
BsaHI GRCGYC 2 cut(s) 114, 315
BsaI GGTCTC 1 cut(s) 338
BsaJI CCNNGG 4 cut(s) 541, 959, 1128, 1154
BsaWI WCCGGW 1 cut(s) 95
BsaXI ACNNNNNCTCC 6 cut(s) 50, 80, 440, 470, 1155, 1185
Bsc4I CCNNNNNNNGG 9 cut(s) 68, 207, 280, 366, 500, 531, 548, 1155, 1160
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 4 cut(s) 274, 795, 1246, 1315
BseBI CCWGG 1 cut(s) 1130
BseDI CCNNGG 4 cut(s) 541, 959, 1128, 1154
BseGI GGATG 3 cut(s) 709, 1066, 1102
BseLI CCNNNNNNNGG 9 cut(s) 68, 207, 280, 366, 500, 531, 548, 1155, 1160
BseMII CTCAG 1 cut(s) 767
BseNI ACTGG 4 cut(s) 274, 795, 1246, 1315
BseRI GAGGAG 5 cut(s) 25, 55, 491, 913, 968
BseX3I CGGCCG 1 cut(s) 392
BseXI GCAGC 2 cut(s) 408, 411
BsgI GTGCAG 1 cut(s) 1136
Bsh1236I CGCG 1 cut(s) 183
Bsh1285I CGRYCG 1 cut(s) 395
BshFI GGCC 3 cut(s) 214, 264, 394
BshNI GGYRCC 3 cut(s) 71, 92, 537
BsiEI CGRYCG 1 cut(s) 395
BsiHKAI GWGCWC 2 cut(s) 243, 273
BsiHKCI CYCGRG 1 cut(s) 541
BsiSI CCGG 5 cut(s) 69, 96, 494, 525, 542
BsiWI CGTACG 1 cut(s) 327
BslFI GGGAC 1 cut(s) 1111
BslI CCNNNNNNNGG 9 cut(s) 68, 207, 280, 366, 500, 531, 548, 1155, 1160
BsmAI GTCTC 7 cut(s) 281, 338, 732, 905, 940, 1136, 1232
BsmBI CGTCTC 1 cut(s) 281
BsmFI GGGAC 1 cut(s) 1111
BsmI GAATGC 2 cut(s) 568, 853
BsnI GGCC 3 cut(s) 214, 264, 394
Bso31I GGTCTC 1 cut(s) 338
BsoBI CYCGRG 1 cut(s) 541
Bsp119I TTCGAA 4 cut(s) 638, 650, 674, 875
Bsp1286I GDGCHC 3 cut(s) 243, 258, 273
Bsp143I GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
BspANI GGCC 3 cut(s) 214, 264, 394
BspCNI CTCAG 1 cut(s) 768
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 7 cut(s) 73, 94, 215, 539, 957, 1072, 1168
BspMAI CTGCAG 1 cut(s) 429
BspPI GGATC 4 cut(s) 190, 468, 731, 1310
BspT104I TTCGAA 4 cut(s) 638, 650, 674, 875
BspT107I GGYRCC 3 cut(s) 71, 92, 537
BspTNI GGTCTC 1 cut(s) 338
BsrBI CCGCTC 2 cut(s) 391, 451
BsrFI RCCGGY 1 cut(s) 493
BsrI ACTGG 4 cut(s) 274, 795, 1246, 1315
BssAI RCCGGY 1 cut(s) 493
BssECI CCNNGG 4 cut(s) 541, 959, 1128, 1154
BssMI GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
BssNAI GTATAC 1 cut(s) 594
BssNI GRCGYC 2 cut(s) 114, 315
BssSI CACGAG 1 cut(s) 266
BssT1I CCWWGG 1 cut(s) 1154
Bst1107I GTATAC 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 266
Bst2UI CCWGG 1 cut(s) 1130
Bst4CI ACNGT 2 cut(s) 332, 804
Bst6I CTCTTC 4 cut(s) 480, 683, 825, 879
BstACI GRCGYC 2 cut(s) 114, 315
BstBI TTCGAA 4 cut(s) 638, 650, 674, 875
BstC8I GCNNGC 2 cut(s) 181, 981
BstDEI CTNAG 2 cut(s) 39, 776
BstF5I GGATG 3 cut(s) 709, 1066, 1102
BstFNI CGCG 1 cut(s) 183
BstKTI GATC 7 cut(s) 189, 198, 401, 463, 726, 1318, 1327
BstMAI GTCTC 7 cut(s) 281, 338, 732, 905, 940, 1136, 1232
BstMBI GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
BstMCI CGRYCG 1 cut(s) 395
BstMWI GCNNNNNNNGC 1 cut(s) 113
BstNI CCWGG 1 cut(s) 1130
BstSCI CCNGG 4 cut(s) 524, 540, 541, 1128
BstSFI CTRYAG 1 cut(s) 425
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 2 cut(s) 408, 411
BstZ17I GTATAC 1 cut(s) 594
BstZI CGGCCG 1 cut(s) 392
BsuI GTATCC 1 cut(s) 409
BsuRI GGCC 3 cut(s) 214, 264, 394
BtsCI GGATG 3 cut(s) 709, 1066, 1102
Cac8I GCNNGC 2 cut(s) 181, 981
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 3 cut(s) 213, 1070, 1166
Cfr9I CCCGGG 1 cut(s) 541
CseI GACGC 3 cut(s) 122, 298, 323
Csp6I GTAC 4 cut(s) 328, 481, 529, 538
CviAII CATG 3 cut(s) 235, 975, 1268
CviQI GTAC 4 cut(s) 328, 481, 529, 538
DdeI CTNAG 2 cut(s) 39, 776
DpnI GATC 7 cut(s) 188, 197, 400, 462, 725, 1317, 1326
DpnII GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
DraI TTTAAA 1 cut(s) 436
EaeI YGGCCR 2 cut(s) 262, 392
EagI CGGCCG 1 cut(s) 392
Eam1104I CTCTTC 4 cut(s) 480, 683, 825, 879
EarI CTCTTC 4 cut(s) 480, 683, 825, 879
EciI GGCGGA 1 cut(s) 154
Ecl136II GAGCTC 2 cut(s) 241, 271
EclXI CGGCCG 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 1154
Eco24I GRGCYC 3 cut(s) 243, 258, 273
Eco31I GGTCTC 1 cut(s) 338
Eco47I GGWCC 2 cut(s) 1070, 1166
Eco52I CGGCCG 1 cut(s) 392
Eco53kI GAGCTC 2 cut(s) 241, 271
Eco88I CYCGRG 1 cut(s) 541
EcoICRI GAGCTC 2 cut(s) 241, 271
EcoO109I RGGNCCY 1 cut(s) 1166
EcoRI GAATTC 3 cut(s) 140, 646, 670
EcoRII CCWGG 1 cut(s) 1128
EcoT14I CCWWGG 1 cut(s) 1154
EcoT38I GRGCYC 3 cut(s) 243, 258, 273
ErhI CCWWGG 1 cut(s) 1154
Esp3I CGTCTC 1 cut(s) 281
FaeI CATG 3 cut(s) 238, 978, 1271
FaqI GGGAC 1 cut(s) 1111
FatI CATG 3 cut(s) 234, 974, 1267
FauI CCCGC 4 cut(s) 188, 724, 844, 1019
FblI GTMKAC 1 cut(s) 593
Fnu4HI GCNGC 5 cut(s) 117, 212, 392, 422, 425
FokI GGATG 3 cut(s) 716, 1073, 1109
FriOI GRGCYC 3 cut(s) 243, 258, 273
Fsp4HI GCNGC 5 cut(s) 117, 212, 392, 422, 425
GluI GCNGC 5 cut(s) 117, 212, 392, 422, 425
GsuI CTGGAG 1 cut(s) 257
HaeIII GGCC 3 cut(s) 214, 264, 394
HapII CCGG 5 cut(s) 69, 96, 494, 525, 542
HgaI GACGC 3 cut(s) 122, 298, 323
Hin1I GRCGYC 2 cut(s) 114, 315
Hin1II CATG 3 cut(s) 238, 978, 1271
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 4 cut(s) 356, 364, 1226, 1256
HpaII CCGG 5 cut(s) 69, 96, 494, 525, 542
HphI GGTGA 4 cut(s) 241, 866, 1066, 1325
Hpy166II GTNNAC 3 cut(s) 301, 594, 1308
Hpy188I TCNGA 6 cut(s) 355, 361, 460, 600, 1231, 1261
Hpy188III TCNNGA 7 cut(s) 286, 344, 368, 402, 737, 1139, 1289
Hpy8I GTNNAC 3 cut(s) 301, 594, 1308
Hpy99I CGWCG 3 cut(s) 116, 308, 317
HpyAV CCTTC 7 cut(s) 22, 562, 652, 676, 692, 706, 1216
HpyCH4III ACNGT 2 cut(s) 332, 804
HpyCH4V TGCA 3 cut(s) 427, 632, 1117
HpyF10VI GCNNNNNNNGC 1 cut(s) 113
HpyF3I CTNAG 2 cut(s) 39, 776
Hsp92I GRCGYC 2 cut(s) 114, 315
Hsp92II CATG 3 cut(s) 238, 978, 1271
KpnI GGTACC 1 cut(s) 541
Kzo9I GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
LmnI GCTCC 6 cut(s) 238, 246, 276, 448, 955, 1108
Lsp1109I GCAGC 2 cut(s) 408, 411
LweI GCATC 2 cut(s) 136, 480
MaeIII GTNAC 1 cut(s) 503
MalI GATC 7 cut(s) 188, 197, 400, 462, 725, 1317, 1326
MbiI CCGCTC 2 cut(s) 391, 451
MboI GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
MhlI GDGCHC 3 cut(s) 243, 258, 273
MluCI AATT 8 cut(s) 140, 552, 582, 634, 646, 670, 866, 1031
MmeI TCCRAC 4 cut(s) 438, 453, 1048, 1254
MroXI GAANNNNTTC 1 cut(s) 670
MseI TTAA 2 cut(s) 435, 806
MspI CCGG 5 cut(s) 69, 96, 494, 525, 542
MspR9I CCNGG 4 cut(s) 526, 542, 543, 1130
Mva1269I GAATGC 2 cut(s) 568, 853
MvaI CCWGG 1 cut(s) 1130
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 1 cut(s) 113
NciI CCSGG 3 cut(s) 526, 542, 543
NdeII GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
NlaIII CATG 3 cut(s) 238, 978, 1271
NlaIV GGNNCC 7 cut(s) 73, 94, 215, 539, 957, 1072, 1168
NmeAIII GCCGAG 4 cut(s) 420, 969, 984, 1327
NspV TTCGAA 4 cut(s) 638, 650, 674, 875
PcsI WCGNNNNNNNCGW 1 cut(s) 309
PctI GAATGC 2 cut(s) 568, 853
PdmI GAANNNNTTC 1 cut(s) 670
PfeI GAWTC 4 cut(s) 356, 364, 1226, 1256
Pfl23II CGTACG 1 cut(s) 327
PflMI CCANNNNNTGG 2 cut(s) 207, 1160
PkrI GCNGC 5 cut(s) 118, 213, 393, 423, 426
PpuMI RGGWCCY 1 cut(s) 1166
Psp124BI GAGCTC 2 cut(s) 243, 273
Psp5II RGGWCCY 1 cut(s) 1166
Psp6I CCWGG 1 cut(s) 1128
PspGI CCWGG 1 cut(s) 1128
PspLI CGTACG 1 cut(s) 327
PspN4I GGNNCC 7 cut(s) 73, 94, 215, 539, 957, 1072, 1168
PspPI GGNCC 3 cut(s) 213, 1070, 1166
PspPPI RGGWCCY 1 cut(s) 1166
PstI CTGCAG 1 cut(s) 429
RsaI GTAC 4 cut(s) 329, 482, 530, 539
RsaNI GTAC 4 cut(s) 328, 481, 529, 538
SacI GAGCTC 2 cut(s) 243, 273
SaqAI TTAA 2 cut(s) 435, 806
SatI GCNGC 5 cut(s) 117, 212, 392, 422, 425
Sau3AI GATC 7 cut(s) 186, 195, 398, 460, 723, 1315, 1324
Sau96I GGNCC 3 cut(s) 213, 1070, 1166
ScrFI CCNGG 4 cut(s) 526, 542, 543, 1130
SduI GDGCHC 3 cut(s) 243, 258, 273
SetI ASST 9 cut(s) 243, 273, 285, 377, 760, 837, 1056, 1082, 1113
SfaNI GCATC 2 cut(s) 136, 480
SfcI CTRYAG 1 cut(s) 425
SfuI TTCGAA 4 cut(s) 638, 650, 674, 875
SinI GGWCC 2 cut(s) 1070, 1166
SmaI CCCGGG 1 cut(s) 543
SmlI CTYRAG 3 cut(s) 895, 1139, 1289
SmoI CTYRAG 3 cut(s) 895, 1139, 1289
Sse9I AATT 8 cut(s) 140, 552, 582, 634, 646, 670, 866, 1031
SstI GAGCTC 2 cut(s) 243, 273
StyD4I CCNGG 4 cut(s) 524, 540, 541, 1128
StyI CCWWGG 1 cut(s) 1154
TaaI ACNGT 2 cut(s) 332, 804
TaqII GACCGA 1 cut(s) 286
TasI AATT 8 cut(s) 140, 552, 582, 634, 646, 670, 866, 1031
TauI GCSGC 3 cut(s) 119, 214, 394
TfiI GAWTC 4 cut(s) 356, 364, 1226, 1256
Tru1I TTAA 2 cut(s) 435, 806
Tru9I TTAA 2 cut(s) 435, 806
TseI GCWGC 2 cut(s) 421, 424
TspDTI ATGAA 3 cut(s) 17, 242, 843
TspMI CCCGGG 1 cut(s) 541
Van91I CCANNNNNTGG 2 cut(s) 207, 1160
VpaK11BI GGWCC 2 cut(s) 1070, 1166
XapI RAATTY 4 cut(s) 140, 634, 646, 670
XmaI CCCGGG 1 cut(s) 541
XmiI GTMKAC 1 cut(s) 593
XmnI GAANNNNTTC 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.