Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006074

Physical Location & Seq

Genomic Coordinates Forward (+)

15851668 .. 15856998

Gene Structure 5331 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0170400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGTCTCTTCTCGATGAGCTCGTCGCCGCTAGCAGCCATACTCCGTCACTGAAGATCACGGCGAATGCGCTGTCAACCTCTTTTGGGCCTTTCCAATTCCATAACTTTTTTTGTCAAATTCCGAGGGAGAGGGGCTTTTCTGATATGGGGGCGTCACTCTCGAACTTGACGGAAGGGGCGACTGGGTCGGGTTTGGGTCCGAGTTTGAGCATGATGTTCTGTGTGGCCTGTGTTTTCATGTACCTGACTCCGCCTGCGATTTGCAACCTCTCTAGGCTTAACCGGGCGTTTCGCGGCGCCGCTTCGTCCGATGCTATTTGGGAAATGAAACTGCCCATTAATTATCATGATCTGCTTGATTTGATGCCTTCGAAGAGAGGACTGAAATTGGAGAGGAGGAAGGGAGAATTTATCAAGGCCAAGAAGGGTATTGCTTCTTCTTGCTCTGGGTGGTTGTTTGTGAATTTTGCAGAATGGAATAGCAGAGAAGAATTGGTGGGTCATCTAATTTGCTTTATCCATTTTTTCTGGGAATTTACAATGTTGCCATCTGCGAGAACAAAATGGATGTCTTCATTCATGAAATGGAACCTTACAAATCAGAATACAAGATCAGAGTTCGTATATCGAGTGTGCAGAGCAAAGAAATATAATACTGACAAGAATGATGGTCTCCACTCTGTCTTGATTGATGAAAAGGGTGACGCTATTCATGCAATTAGCAGTGAATCTGACTACCCTTTAATTCACAAAAAAATACAACAAGGCAAGGTTTATGACATTCACAATTTCTTTACACGAAAAAACCAGGAAAACTTCAAGTTTGTTGATCATCAGAGTCAAGTCCGTTTCAATGCAATGACTGTCTTTGAAGCAGTTGAAGGAAACTGCCCAGAAATTTCAGAGCATCGATTCTATTTAGTAGAATTTGATAAACTCGAAGCACGCATGAATGATCATACAATTCTAACAGATGTGTATGGCTGTTTGAAGTCGATTGTACCACCACATGAGACAACTGTCAAGGATAAAGAGTCAAAATGTGAAATCCATTTGCAGAATTTAAGAAGAGAGAACTTGAGAATTACACTCTGGGGCAACACTGCTAGACAAGTCGACATGGAAACAATTAGAAAAGCTTCTCCACCAGTGCTGATGGCATTAACCAGTTTAAAAATCAAAGAGTACTTGAACAAACCTGCCCCATCAAATACAAGCAACACCTGTATTTTCATCAATCCAAAGATCCCAGAGACAAACAAGTACAGGCTTCAGTTCTCAAAACTGGTTGATAGAGTGCAAATACTTCCAACACCATTCAAACAGCCAACATCAGAAGAAATCCAGGAAACCAATATGAAAACAGTGACTGGATTGAACATATTGGATCCATTGTCATACAAGGAACAAATGGTGTATTGCAATGCTTCAATTTCCAGATTTGCAACACACGACGGTTGGTGGTATAAAGGATGTCCTCACTGTTATCGAGAATTAAAAGAACAAGAACATGACAATCAACTCGGCTGCTCACTTCATGGGAAGCAAGAAATTCTTCCTTGTTTCAGAATCTACATGACTATCACAGATGGACAAAATGAGGCAACGGTTATCATAATGGGAAAACCAGCAGAGCAACTGTTTGGAAGTAGTTGCAAAGATTTGGTCAGCAAAAGATCATACCCAACAGAATCAACACTACCAGAGGAGATAGAAAAAACAAGAGGCCAAAAGTTCCTTTTTCAGCTCAAGATAAAGGAAGATAGTGAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009870 GO:0009987 GO:0023052 GO:0031347 GO:0031349 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0080134 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch_2 KOW

Protein Analysis

591

Amino Acids

67.78

Weight (kDa)

8.42

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF223	PF02721	215 - 290	1.1e-06	Domain of unknown function DUF223
REPA_OB_2	PF16900	316 - 400	2.9e-06	Replication protein A OB domain
Rep_fac-A_C	PF08646	474 - 589	5.1e-08	Replication factor-A C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33520
fragaria_vesca	FvH4_3g22160 FvH4_3g22160 FvH4_3g22160 FvH4_3g22160 FvH4_3g22160 FvH4_3g22160
malus_domestica	MD03G1208000.v1.1 MD11G1222200.v1.1
prunus_persica	Prupe.4G208800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0038051
rosa_laevigata	RLG00000033832
rosa_multiflora	Rmu_sc0002670.1_g000010 Rmu_sc0008278.1_g000003
rosa_roxburghii	Rroxscaffold_1G00042880
rosa_rugosa	Rorug05G0170200 Rorug05G0170300 Rorug05G0170400 Rorug05G0170500 Rorug05G0170600 Rorug05G0170600 Rorug05G0170700
rosa_samantha	Rh5AG258300 Rh5BG261700 Rh5CG293700 Rh5DG270700
rosa_wichuraiana	Rw5G024150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1207
AccB1I	GGYRCC	1 cut(s)	296
AccI	GTMKAC	1 cut(s)	1116
AccII	CGCG	1 cut(s)	294
AciI	CCGC	4 cut(s)	27, 251, 294, 300
AclWI	GGATC	3 cut(s)	1240, 1382, 1395
AcsI	RAATTY	8 cut(s)	117, 407, 463, 533, 897, 926, 1060, 1551
AcuI	CTGAAG	2 cut(s)	71, 1256
AcyI	GRCGYC	2 cut(s)	152, 297
AfaI	GTAC	4 cut(s)	242, 1002, 1187, 1265
AfiI	CCNNNNNNNGG	1 cut(s)	84
AgsI	TTSAA	9 cut(s)	820, 853, 872, 881, 991, 1192, 1321, 1378, 1431
AjnI	CCWGG	2 cut(s)	807, 1344
AluBI	AGCT	4 cut(s)	19, 1139, 1747, 1771
AluI	AGCT	4 cut(s)	19, 1139, 1747, 1771
Alw21I	GWGCWC	1 cut(s)	21
Alw26I	GTCTC	4 cut(s)	9, 677, 1007, 1247
AlwI	GGATC	3 cut(s)	1240, 1382, 1395
AlwNI	CAGNNNCTG	1 cut(s)	1370
AoxI	GGCC	4 cut(s)	86, 225, 417, 1726
ApeKI	GCWGC	2 cut(s)	33, 1527
ApoI	RAATTY	8 cut(s)	117, 407, 463, 533, 897, 926, 1060, 1551
ArsI	GACNNNNNNTTYG	6 cut(s)	56, 88, 554, 586, 1650, 1682
AseI	ATTAAT	1 cut(s)	339
Asp700I	GAANNNNTTC	2 cut(s)	1138, 1554
AspLEI	GCGC	2 cut(s)	70, 299
AspS9I	GGNCC	2 cut(s)	86, 197
AsuC2I	CCSGG	1 cut(s)	284
AsuHPI	GGTGA	1 cut(s)	713
AsuII	TTCGAA	1 cut(s)	371
AsuNHI	GCTAGC	1 cut(s)	29
AvaII	GGWCC	1 cut(s)	197
BamHI	GGATCC	1 cut(s)	1387
BanI	GGYRCC	1 cut(s)	296
BanII	GRGCYC	1 cut(s)	21
BarI	GAAGNNNNNNTAC	2 cut(s)	421, 453
BbsI	GAAGAC	1 cut(s)	564
Bbv12I	GWGCWC	1 cut(s)	21
BbvI	GCAGC	2 cut(s)	45, 1514
BccI	CCATC	5 cut(s)	556, 662, 1150, 1213, 1583
BceAI	ACGGC	1 cut(s)	75
BciT130I	CCWGG	2 cut(s)	809, 1346
BclI	TGATCA	2 cut(s)	829, 955
BcnI	CCSGG	1 cut(s)	284
BcoDI	GTCTC	4 cut(s)	9, 677, 1007, 1247
BfaI	CTAG	3 cut(s)	30, 273, 1107
BfoI	RGCGCY	1 cut(s)	300
BfuAI	ACCTGC	1 cut(s)	1207
BisI	GCNGC	5 cut(s)	27, 34, 295, 300, 1528
BlsI	GCNGC	5 cut(s)	28, 35, 296, 301, 1529
BmcAI	AGTACT	1 cut(s)	1187
Bme1390I	CCNGG	3 cut(s)	284, 809, 1346
Bme18I	GGWCC	1 cut(s)	197
BmgT120I	GGNCC	2 cut(s)	86, 197
BmiI	GGNNCC	4 cut(s)	198, 298, 590, 1389
BmrFI	CCNGG	3 cut(s)	284, 809, 1346
BmrI	ACTGGG	1 cut(s)	192
BmsI	GCATC	3 cut(s)	301, 354, 916
BmtI	GCTAGC	1 cut(s)	33
BmuI	ACTGGG	1 cut(s)	192
BoxI	GACNNNNGTC	1 cut(s)	1019
BpiI	GAAGAC	1 cut(s)	564
Bpu14I	TTCGAA	1 cut(s)	371
BpuEI	CTTGAG	2 cut(s)	1099, 1733
BpuMI	CCSGG	1 cut(s)	284
Bsa29I	ATCGAT	1 cut(s)	910
BsaHI	GRCGYC	2 cut(s)	152, 297
BsaI	GGTCTC	1 cut(s)	677
BsaJI	CCNNGG	1 cut(s)	122
Bsc4I	CCNNNNNNNGG	1 cut(s)	84
Bse1I	ACTGG	5 cut(s)	187, 1148, 1167, 1290, 1375
Bse3DI	GCAATG	2 cut(s)	864, 1429
BseBI	CCWGG	2 cut(s)	809, 1346
BseCI	ATCGAT	1 cut(s)	910
BseDI	CCNNGG	1 cut(s)	122
BseGI	GGATG	2 cut(s)	573, 1478
BseLI	CCNNNNNNNGG	1 cut(s)	84
BseMI	GCAATG	2 cut(s)	864, 1429
BseNI	ACTGG	5 cut(s)	187, 1148, 1167, 1290, 1375
BseRI	GAGGAG	2 cut(s)	409, 1721
BseXI	GCAGC	2 cut(s)	45, 1514
BsgI	GTGCAG	1 cut(s)	655
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	4 cut(s)	88, 227, 419, 1728
BshNI	GGYRCC	1 cut(s)	296
BshVI	ATCGAT	1 cut(s)	910
BsiHKAI	GWGCWC	1 cut(s)	21
BsiSI	CCGG	1 cut(s)	283
BslI	CCNNNNNNNGG	1 cut(s)	84
BsmAI	GTCTC	4 cut(s)	9, 677, 1007, 1247
BsmI	GAATGC	1 cut(s)	70
BsnI	GGCC	4 cut(s)	88, 227, 419, 1728
Bso31I	GGTCTC	1 cut(s)	677
Bsp119I	TTCGAA	1 cut(s)	371
Bsp1286I	GDGCHC	1 cut(s)	21
Bsp143I	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
BspACI	CCGC	4 cut(s)	27, 251, 294, 300
BspANI	GGCC	4 cut(s)	88, 227, 419, 1728
BspDI	ATCGAT	1 cut(s)	910
BspFNI	CGCG	1 cut(s)	294
BspHI	TCATGA	2 cut(s)	346, 579
BspLI	GGNNCC	4 cut(s)	198, 298, 590, 1389
BspMI	ACCTGC	1 cut(s)	1207
BspOI	GCTAGC	1 cut(s)	33
BspPI	GGATC	3 cut(s)	1240, 1382, 1395
BspT104I	TTCGAA	1 cut(s)	371
BspT107I	GGYRCC	1 cut(s)	296
BspTNI	GGTCTC	1 cut(s)	677
BsrDI	GCAATG	2 cut(s)	864, 1429
BsrI	ACTGG	5 cut(s)	187, 1148, 1167, 1290, 1375
BssECI	CCNNGG	1 cut(s)	122
BssMI	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
BssNI	GRCGYC	2 cut(s)	152, 297
Bst2UI	CCWGG	2 cut(s)	809, 1346
Bst4CI	ACNGT	7 cut(s)	865, 1021, 1366, 1457, 1484, 1609, 1641
Bst6I	CTCTTC	3 cut(s)	12, 368, 1063
BstACI	GRCGYC	2 cut(s)	152, 297
BstBI	TTCGAA	1 cut(s)	371
BstC8I	GCNNGC	3 cut(s)	31, 255, 946
BstF5I	GGATG	2 cut(s)	573, 1478
BstFNI	CGCG	1 cut(s)	294
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	2 cut(s)	70, 299
BstKTI	GATC	8 cut(s)	57, 352, 614, 832, 958, 1248, 1390, 1679
BstMAI	GTCTC	4 cut(s)	9, 677, 1007, 1247
BstMBI	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
BstMWI	GCNNNNNNNGC	1 cut(s)	713
BstNI	CCWGG	2 cut(s)	809, 1346
BstPAI	GACNNNNGTC	1 cut(s)	1019
BstSCI	CCNGG	3 cut(s)	282, 807, 1344
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	2 cut(s)	45, 1514
BstV2I	GAAGAC	1 cut(s)	564
BstX2I	RGATCY	2 cut(s)	1245, 1387
BstYI	RGATCY	2 cut(s)	1245, 1387
Bsu15I	ATCGAT	1 cut(s)	910
BsuRI	GGCC	4 cut(s)	88, 227, 419, 1728
BsuTUI	ATCGAT	1 cut(s)	910
BtsCI	GGATG	2 cut(s)	573, 1478
BtsI	GCAGTG	2 cut(s)	730, 1101
BtsIMutI	CAGTG	6 cut(s)	47, 730, 1101, 1155, 1371, 1480
BveI	ACCTGC	1 cut(s)	1207
Cac8I	GCNNGC	3 cut(s)	31, 255, 946
CaiI	CAGNNNCTG	1 cut(s)	1370
CciI	TCATGA	2 cut(s)	346, 579
CfoI	GCGC	2 cut(s)	70, 299
Cfr13I	GGNCC	2 cut(s)	86, 197
ClaI	ATCGAT	1 cut(s)	910
CseI	GACGC	2 cut(s)	141, 713
Csp6I	GTAC	4 cut(s)	241, 1001, 1186, 1264
CviQI	GTAC	4 cut(s)	241, 1001, 1186, 1264
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	8 cut(s)	56, 351, 613, 831, 957, 1247, 1389, 1678
DpnII	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
DraI	TTTAAA	1 cut(s)	1173
Eam1104I	CTCTTC	3 cut(s)	12, 368, 1063
EarI	CTCTTC	3 cut(s)	12, 368, 1063
EciI	GGCGGA	1 cut(s)	240
Ecl136II	GAGCTC	1 cut(s)	19
Eco24I	GRGCYC	1 cut(s)	21
Eco31I	GGTCTC	1 cut(s)	677
Eco47I	GGWCC	1 cut(s)	197
Eco53kI	GAGCTC	1 cut(s)	19
Eco57I	CTGAAG	2 cut(s)	71, 1256
EcoICRI	GAGCTC	1 cut(s)	19
EcoRII	CCWGG	2 cut(s)	807, 1344
EcoT38I	GRGCYC	1 cut(s)	21
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FbaI	TGATCA	2 cut(s)	829, 955
FblI	GTMKAC	1 cut(s)	1116
Fnu4HI	GCNGC	5 cut(s)	27, 34, 295, 300, 1528
FokI	GGATG	2 cut(s)	580, 1485
FriOI	GRGCYC	1 cut(s)	21
Fsp4HI	GCNGC	5 cut(s)	27, 34, 295, 300, 1528
FspBI	CTAG	3 cut(s)	30, 273, 1107
GlaI	GCGC	2 cut(s)	69, 298
GluI	GCNGC	5 cut(s)	27, 34, 295, 300, 1528
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	4 cut(s)	88, 227, 419, 1728
HapII	CCGG	1 cut(s)	283
HgaI	GACGC	2 cut(s)	141, 713
HhaI	GCGC	2 cut(s)	70, 299
Hin1I	GRCGYC	2 cut(s)	152, 297
Hin6I	GCGC	2 cut(s)	68, 297
HinP1I	GCGC	2 cut(s)	68, 297
HincII	GTYRAC	2 cut(s)	75, 1117
HindII	GTYRAC	2 cut(s)	75, 1117
HindIII	AAGCTT	1 cut(s)	1137
HinfI	GANTC	7 cut(s)	247, 728, 838, 912, 1034, 1569, 1691
HpaII	CCGG	1 cut(s)	283
HphI	GGTGA	1 cut(s)	713
Hpy166II	GTNNAC	2 cut(s)	75, 1117
Hpy188III	TCNNGA	8 cut(s)	11, 160, 347, 580, 685, 1437, 1490, 1750
Hpy8I	GTNNAC	2 cut(s)	75, 1117
Hpy99I	CGWCG	2 cut(s)	26, 1457
HpyAV	CCTTC	5 cut(s)	167, 378, 394, 418, 875
HpyCH4III	ACNGT	7 cut(s)	865, 1021, 1366, 1457, 1484, 1609, 1641
HpyF10VI	GCNNNNNNNGC	1 cut(s)	713
Hsp92I	GRCGYC	2 cut(s)	152, 297
HspAI	GCGC	2 cut(s)	68, 297
KasI	GGCGCC	1 cut(s)	296
Ksp22I	TGATCA	2 cut(s)	829, 955
Kzo9I	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
Lsp1109I	GCAGC	2 cut(s)	45, 1514
LweI	GCATC	3 cut(s)	301, 354, 916
MaeI	CTAG	3 cut(s)	30, 273, 1107
MaeIII	GTNAC	4 cut(s)	45, 153, 701, 1366
MalI	GATC	8 cut(s)	56, 351, 613, 831, 957, 1247, 1389, 1678
MboI	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
MboII	GAAGA	9 cut(s)	64, 385, 429, 500, 564, 1080, 1349, 1547, 1772
MflI	RGATCY	2 cut(s)	1245, 1387
MhlI	GDGCHC	1 cut(s)	21
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	3 cut(s)	241, 847, 1043
MmeI	TCCRAC	1 cut(s)	1334
MroXI	GAANNNNTTC	2 cut(s)	1138, 1554
MseI	TTAA	7 cut(s)	279, 339, 743, 1064, 1163, 1172, 1496
MspI	CCGG	1 cut(s)	283
MspR9I	CCNGG	3 cut(s)	284, 809, 1346
Mva1269I	GAATGC	1 cut(s)	70
MvaI	CCWGG	2 cut(s)	809, 1346
MvnI	CGCG	1 cut(s)	294
MwoI	GCNNNNNNNGC	1 cut(s)	713
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	1 cut(s)	284
NdeII	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
NheI	GCTAGC	1 cut(s)	29
NlaIV	GGNNCC	4 cut(s)	198, 298, 590, 1389
NmeAIII	GCCGAG	1 cut(s)	1503
NmuCI	GTSAC	4 cut(s)	45, 153, 701, 1366
NspV	TTCGAA	1 cut(s)	371
PagI	TCATGA	2 cut(s)	346, 579
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 176
PctI	GAATGC	1 cut(s)	70
PdmI	GAANNNNTTC	2 cut(s)	1138, 1554
PfeI	GAWTC	4 cut(s)	728, 912, 1569, 1691
PflFI	GACNNNGTC	1 cut(s)	184
PfoI	TCCNGGA	1 cut(s)	1344
PkrI	GCNGC	5 cut(s)	28, 35, 296, 301, 1529
PleI	GAGTC	3 cut(s)	241, 846, 1042
PluTI	GGCGCC	1 cut(s)	300
PpsI	GAGTC	3 cut(s)	241, 846, 1042
PshAI	GACNNNNGTC	1 cut(s)	1019
PshBI	ATTAAT	1 cut(s)	339
Psp124BI	GAGCTC	1 cut(s)	21
Psp6I	CCWGG	2 cut(s)	807, 1344
PspGI	CCWGG	2 cut(s)	807, 1344
PspN4I	GGNNCC	4 cut(s)	198, 298, 590, 1389
PspPI	GGNCC	2 cut(s)	86, 197
PstNI	CAGNNNCTG	1 cut(s)	1370
PsuI	RGATCY	2 cut(s)	1245, 1387
PsyI	GACNNNGTC	1 cut(s)	184
RsaI	GTAC	4 cut(s)	242, 1002, 1187, 1265
RsaNI	GTAC	4 cut(s)	241, 1001, 1186, 1264
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	1 cut(s)	1115
SaqAI	TTAA	7 cut(s)	279, 339, 743, 1064, 1163, 1172, 1496
SatI	GCNGC	5 cut(s)	27, 34, 295, 300, 1528
Sau3AI	GATC	8 cut(s)	54, 349, 611, 829, 955, 1245, 1387, 1676
Sau96I	GGNCC	2 cut(s)	86, 197
ScaI	AGTACT	1 cut(s)	1187
SchI	GAGTC	3 cut(s)	241, 847, 1043
ScrFI	CCNGG	3 cut(s)	284, 809, 1346
SduI	GDGCHC	1 cut(s)	21
SfaNI	GCATC	3 cut(s)	301, 354, 916
SfoI	GGCGCC	1 cut(s)	298
SfuI	TTCGAA	1 cut(s)	371
SinI	GGWCC	1 cut(s)	197
SmlI	CTYRAG	2 cut(s)	1078, 1748
SmoI	CTYRAG	2 cut(s)	1078, 1748
SsiI	CCGC	4 cut(s)	27, 251, 294, 300
SspDI	GGCGCC	1 cut(s)	296
SspMI	CTAG	3 cut(s)	30, 273, 1107
SstI	GAGCTC	1 cut(s)	21
StyD4I	CCNGG	3 cut(s)	282, 807, 1344
TaaI	ACNGT	7 cut(s)	865, 1021, 1366, 1457, 1484, 1609, 1641
TaqI	TCGA	9 cut(s)	12, 161, 371, 628, 910, 939, 995, 1116, 1489
TatI	WGTACW	2 cut(s)	1185, 1263
TauI	GCSGC	3 cut(s)	29, 297, 302
TfiI	GAWTC	4 cut(s)	728, 912, 1569, 1691
Tru1I	TTAA	7 cut(s)	279, 339, 743, 1064, 1163, 1172, 1496
Tru9I	TTAA	7 cut(s)	279, 339, 743, 1064, 1163, 1172, 1496
TscAI	CASTG	6 cut(s)	54, 730, 1108, 1155, 1371, 1487
TseFI	GTSAC	4 cut(s)	45, 153, 701, 1366
TseI	GCWGC	2 cut(s)	33, 1527
Tsp45I	GTSAC	4 cut(s)	45, 153, 701, 1366
TspGWI	ACGGA	3 cut(s)	33, 185, 836
TspRI	CASTG	6 cut(s)	54, 730, 1108, 1155, 1371, 1487
Tth111I	GACNNNGTC	1 cut(s)	184
VpaK11BI	GGWCC	1 cut(s)	197
VspI	ATTAAT	1 cut(s)	339
XapI	RAATTY	8 cut(s)	117, 407, 463, 533, 897, 926, 1060, 1551
XmiI	GTMKAC	1 cut(s)	1116
XmnI	GAANNNNTTC	2 cut(s)	1138, 1554
XspI	CTAG	3 cut(s)	30, 273, 1107
ZrmI	AGTACT	1 cut(s)	1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.