Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0007973

Physical Location & Seq

Genomic Coordinates Forward (+)

34322753 .. 34330433

Gene Structure 7681 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1235900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGGTGACTTGTCAAGGGAGGATTTTAGTAATACGCTTCGAATACTTGTTGCTACGGATTGCCATCTGGGTTATATGGAGAAGGATGAAGTACGGCGCCATGATTCATTCCAGGCATTTGATGAGATATGCTCAATAGCACAACAAAAAAATGTGGATTTTTTGCTTCTGGGTGGTGATCTGTTCCATGAGAATAAGCCTTCAAGGTCAACACTAGTTAAGGCCATTGAGATTCTCCGCCGTCATTGCCTCAATGATCAGCCAGTGCAGTTCCAAGTTGTTAGCGACCAGACTGTGAATTTTCCAAATACATTTGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGATTGCCAGTGTTTAGTATCCATGGAAATCATGACGACCCTGCTGGAGTGGATAATCTTTCTGCTGTCGATATTCTCTCAGCGTGCAACCTTGTAAACTATTTTGGGAAAATGGGTCTTGGGGGTTCTGGGGTTGGTCAGATCACTGTGTATCCTATTCTCATGAGGAAGGGTGCAACATCAGTGGCTCTTTATGGTCTCGGAAATATTAGAGATGAACGGCTCAATAGAATGTTTCAGACACCACATGCTGTACAATGGATGAGACCTGAATCTCAAGAAGGGTTGGAAGTGTCAGACTGGTTCAACATTCTAGTGCTTCATCAGAACAGAGTGAAGACAAACCCAAAAAATGCCATCAATGAGCACTTTTTACCACGCTTCCTAGACTTCGTAGTGTGGGGGCATGAACACGAATGCCTCGTGGACCCTCAGGAAGTTCCGGGGATGGGATTTCACATTACACAACCTGGTTCTTCAGTTGCAACATCACTGATTGACGGAGAATCAAAGCCAAAGCATGTGCTCCTTTTAGAAATTAAGGGGAATCAATACCGTCCAACCAAGATTCCTTTGACGTCAGTGAGGCCTTTTGAGTACACAGAGATTGTATTAAAAGATGAACCTGAAATTGATCCCAATGATCCTAATTCAATTCTTGAACACTTGGACAAAGTGGTCAACGCTCAGATAGAGAAATCTAGGAAAAATGTTACTGGATCACAGCTCCAACTTCCATTAGTTCGAATAAAGGTGGACTATTCTGGATTTATGACAATAAATCCTCAAAGATTTGGACAGAAGTATGTGGGGAAGGTTGCAAACCCACAAGACATTCTTATATTTTCAAAAGCTTCTACAAAGGGCCGGAGCGAAGCTAAAATTGATGATTCTGAACGGCTTCGCCCAGAAGAACTAAATCAGCAAAACATAGAGGCTTTGGTTGCCGAAAATAATCTGAAAATGGAGATCCTTCCTGTCAATGATTTGGACGTTGCATTACACAATTTTGTCAGTAAGGATGACAAAATGGCTTTCTATTCTTGCGTGAAATACAATCTTGAAGAAACTCGAAAGAAAATTGCTAAGGATCCAGATACAGTGACATTTGAAGAGGAAGATTTAATCGTTAAAGTCGGGGAGTGCTTGCAGGAACGTGTCAAGGAAAGACCTACGAACTCTAAGAGTAACTCTCCATTCTCTTCCACTGCCCCTCCTTGGGAGGATTTCAGAAGTACAAGTGCTGCTGGAACTGCAAGTGCAGTTTCCTTCAGTGACGATGAAGATGCAACGCAGATGACTGGCTCAACATCCACTGCCAGAGGCCGCAAGGGCAGAACGTCTACCTCAGAAGTTGGTAAGGGTAAAACTACTGCAAGAGGAAGGGGCAGGGGCAGGGGCAGGGGCAGGGGTACCAGTACCTTAAAGCAGACGACTCTCGATGCATCTCTTGGATTTCGGTCTTCTCAGAGATCTGCATCAGTTGCTGCAACTGCTGCTGTACGAAGTATTGCTGATGATGGGGATGATGTGGATTCTCCTTCCAGTGAAGAAGAGGCGGGGAAACTTGGAATTGATGAGGTTGATAATAGTTCGGAAAATGATGAAATTGTTCCAAGTAGAGGACGGAAGAGGGCTGCTCCAAGGGGGAGAGGTAGAGGCTCTACGCAACCATCTAAGCGTGGAAGGAAATCAGATAGATCTGCAGTTAACCGAATGTTTATGAACAAAGATGATGACGACGACGATGATGAAGATGTGACAAAGAGATTAAATAAGCCTCTGCCTCGGGTCACGAGAAATTACGGTGCTCTTAGAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000791 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0099086

KEGG Pathways

Metabolic & Signaling

ko03440 ko03450 ko04218 map03440 map03450 map04218

Pfam Domains

Protein Families

Metallophos Mre11_DNA_bind

Protein Analysis

725

Amino Acids

80.6

Weight (kDa)

6.08

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	13 - 257	3.2e-15	Calcineurin-like phosphoesterase
Mre11_DNA_bind	PF04152	303 - 454	3.1e-33	Mre11 DNA-binding presumed domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54260 AT5G54260
fragaria_vesca	FvH4_3g21040 FvH4_3g21040 FvH4_3g21040
malus_domestica	MD03G1218100.v1.1 MD11G1235900.v1.1
prunus_persica	Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1
pyrus_communis	pycom03g16760
rosa_chinensis	RchiOBHm_Chr5g0036071
rosa_laevigata	RLG00000033663
rosa_multiflora	Rmu_sc0000382.1_g000032
rosa_roxburghii	Rroxscaffold_1G00044680
rosa_rugosa	Rorug05G0152500 Rorug05G0152500
rosa_samantha	Rh5AG246700 Rh5BG247000 Rh5CG278100 Rh5DG255600
rosa_wichuraiana	Rw5G022640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1028
AatII	GACGTC	1 cut(s)	932
Acc65I	GGTACC	1 cut(s)	1763
AccB1I	GGYRCC	2 cut(s)	96, 1763
AccI	GTMKAC	1 cut(s)	1694
AciI	CCGC	3 cut(s)	238, 1678, 1910
AclWI	GGATC	7 cut(s)	329, 980, 989, 1078, 1315, 1436, 1449
AcsI	RAATTY	1 cut(s)	298
AcuI	CTGAAG	2 cut(s)	813, 1606
AcyI	GRCGYC	2 cut(s)	97, 929
AfaI	GTAC	7 cut(s)	93, 606, 950, 1588, 1765, 1771, 1854
AfiI	CCNNNNNNNGG	4 cut(s)	800, 1569, 1570, 1973
AflIII	ACRYGT	1 cut(s)	1507
AgsI	TTSAA	8 cut(s)	204, 346, 658, 1005, 1013, 1200, 1415, 1463
AhlI	ACTAGT	1 cut(s)	214
AjnI	CCWGG	2 cut(s)	111, 820
AluBI	AGCT	3 cut(s)	1078, 1205, 1229
AluI	AGCT	3 cut(s)	1078, 1205, 1229
Alw21I	GWGCWC	3 cut(s)	720, 879, 2164
Alw26I	GTCTC	2 cut(s)	554, 610
AlwI	GGATC	7 cut(s)	329, 980, 989, 1078, 1315, 1436, 1449
AlwNI	CAGNNNCTG	1 cut(s)	1838
Ama87I	CYCGRG	1 cut(s)	2139
AoxI	GGCC	4 cut(s)	222, 938, 1216, 1675
ApeKI	GCWGC	4 cut(s)	1595, 1838, 1847, 1988
ApoI	RAATTY	1 cut(s)	298
Asp700I	GAANNNNTTC	2 cut(s)	1251, 1962
Asp718I	GGTACC	1 cut(s)	1763
AspLEI	GCGC	1 cut(s)	99
AspS9I	GGNCC	2 cut(s)	778, 1216
AsuC2I	CCSGG	1 cut(s)	795
AsuHPI	GGTGA	2 cut(s)	17, 188
AsuII	TTCGAA	2 cut(s)	40, 1096
AvaI	CYCGRG	1 cut(s)	2139
AvaII	GGWCC	1 cut(s)	778
AxyI	CCTNAGG	1 cut(s)	783
BamHI	GGATCC	1 cut(s)	1441
BanI	GGYRCC	2 cut(s)	96, 1763
BauI	CACGAG	2 cut(s)	773, 2146
BbsI	GAAGAC	2 cut(s)	695, 1806
Bbv12I	GWGCWC	3 cut(s)	720, 879, 2164
BbvI	GCAGC	4 cut(s)	1582, 1825, 1834, 1975
BccI	CCATC	5 cut(s)	72, 716, 793, 1865, 2032
BceAI	ACGGC	4 cut(s)	110, 225, 587, 1265
BcgI	CGANNNNNNTGC	2 cut(s)	1619, 1653
BciT130I	CCWGG	2 cut(s)	113, 822
BciVI	GTATCC	2 cut(s)	380, 513
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	1 cut(s)	795
BcoDI	GTCTC	2 cut(s)	554, 610
BcuI	ACTAGT	1 cut(s)	214
BfaI	CTAG	4 cut(s)	215, 665, 737, 1053
BfmI	CTRYAG	1 cut(s)	2055
BfoI	RGCGCY	1 cut(s)	100
BfuI	GTATCC	2 cut(s)	380, 513
BglI	GCCNNNNNGGC	1 cut(s)	1683
BglII	AGATCT	2 cut(s)	1823, 2051
BisI	GCNGC	5 cut(s)	1596, 1678, 1839, 1848, 1989
BlsI	GCNGC	5 cut(s)	1597, 1679, 1840, 1849, 1990
Bme1390I	CCNGG	3 cut(s)	113, 795, 822
Bme18I	GGWCC	1 cut(s)	778
BmeT110I	CYCGRG	1 cut(s)	2139
BmgT120I	GGNCC	2 cut(s)	778, 1216
BmiI	GGNNCC	4 cut(s)	98, 780, 1443, 1765
BmrFI	CCNGG	3 cut(s)	113, 795, 822
BmsI	GCATC	4 cut(s)	1627, 1783, 1805, 1838
BpiI	GAAGAC	2 cut(s)	695, 1806
BplI	GAGNNNNNCTC	6 cut(s)	116, 148, 1528, 1560, 1975, 2007
BpmI	CTGGAG	1 cut(s)	417
Bpu10I	CCTNAGC	1 cut(s)	1437
Bpu14I	TTCGAA	2 cut(s)	40, 1096
BpuEI	CTTGAG	1 cut(s)	612
BpuMI	CCSGG	1 cut(s)	795
BsaBI	GATNNNNATC	2 cut(s)	63, 1828
BsaHI	GRCGYC	2 cut(s)	97, 929
BsaI	GGTCTC	2 cut(s)	554, 610
BsaJI	CCNNGG	5 cut(s)	373, 794, 1568, 1994, 2138
BsaXI	ACNNNNNCTCC	2 cut(s)	1549, 1579
Bsc4I	CCNNNNNNNGG	4 cut(s)	800, 1569, 1570, 1973
Bse1I	ACTGG	7 cut(s)	263, 359, 656, 1072, 1657, 1767, 1896
Bse21I	CCTNAGG	1 cut(s)	783
Bse3DI	GCAATG	1 cut(s)	244
Bse8I	GATNNNNATC	2 cut(s)	63, 1828
BseBI	CCWGG	2 cut(s)	113, 822
BseDI	CCNNGG	5 cut(s)	373, 794, 1568, 1994, 2138
BseGI	GGATG	6 cut(s)	91, 618, 804, 1378, 1661, 1882
BseJI	GATNNNNATC	2 cut(s)	63, 1828
BseLI	CCNNNNNNNGG	4 cut(s)	800, 1569, 1570, 1973
BseMI	GCAATG	1 cut(s)	244
BseMII	CTCAG	5 cut(s)	444, 797, 1052, 1713, 1832
BseNI	ACTGG	7 cut(s)	263, 359, 656, 1072, 1657, 1767, 1896
BseXI	GCAGC	4 cut(s)	1582, 1825, 1834, 1975
BsgI	GTGCAG	2 cut(s)	287, 1632
BshFI	GGCC	4 cut(s)	224, 940, 1218, 1677
BshNI	GGYRCC	2 cut(s)	96, 1763
BsiHKAI	GWGCWC	3 cut(s)	720, 879, 2164
BsiHKCI	CYCGRG	1 cut(s)	2139
BsiSI	CCGG	2 cut(s)	794, 1219
BslI	CCNNNNNNNGG	4 cut(s)	800, 1569, 1570, 1973
BsmAI	GTCTC	2 cut(s)	554, 610
BsmI	GAATGC	1 cut(s)	773
BsnI	GGCC	4 cut(s)	224, 940, 1218, 1677
Bso31I	GGTCTC	2 cut(s)	554, 610
BsoBI	CYCGRG	1 cut(s)	2139
Bsp119I	TTCGAA	2 cut(s)	40, 1096
Bsp1286I	GDGCHC	3 cut(s)	720, 879, 2164
Bsp1407I	TGTACA	1 cut(s)	604
Bsp19I	CCATGG	1 cut(s)	373
BspACI	CCGC	3 cut(s)	238, 1678, 1910
BspANI	GGCC	4 cut(s)	224, 940, 1218, 1677
BspCNI	CTCAG	5 cut(s)	443, 796, 1051, 1712, 1831
BspHI	TCATGA	2 cut(s)	382, 513
BspLI	GGNNCC	4 cut(s)	98, 780, 1443, 1765
BspMAI	CTGCAG	1 cut(s)	2059
BspPI	GGATC	7 cut(s)	329, 980, 989, 1078, 1315, 1436, 1449
BspT104I	TTCGAA	2 cut(s)	40, 1096
BspT107I	GGYRCC	2 cut(s)	96, 1763
BspTNI	GGTCTC	2 cut(s)	554, 610
BsrDI	GCAATG	1 cut(s)	244
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	7 cut(s)	263, 359, 656, 1072, 1657, 1767, 1896
BssECI	CCNNGG	5 cut(s)	373, 794, 1568, 1994, 2138
BssNI	GRCGYC	2 cut(s)	97, 929
BssSI	CACGAG	2 cut(s)	773, 2146
BssT1I	CCWWGG	3 cut(s)	373, 1568, 1994
Bst2BI	CACGAG	2 cut(s)	773, 2146
Bst2UI	CCWGG	2 cut(s)	113, 822
Bst4CI	ACNGT	5 cut(s)	295, 499, 908, 1453, 2159
Bst6I	CTCTTC	4 cut(s)	1458, 1558, 1899, 1976
BstACI	GRCGYC	2 cut(s)	97, 929
BstAPI	GCANNNNNTGC	2 cut(s)	1835, 1847
BstAUI	TGTACA	1 cut(s)	604
BstBI	TTCGAA	2 cut(s)	40, 1096
BstC8I	GCNNGC	2 cut(s)	436, 1499
BstDEI	CTNAG	9 cut(s)	430, 783, 1038, 1437, 1533, 1699, 1818, 2028, 2165
BstDSI	CCRYGG	1 cut(s)	373
BstF5I	GGATG	6 cut(s)	91, 618, 804, 1378, 1661, 1882
BstH2I	RGCGCY	1 cut(s)	100
BstHHI	GCGC	1 cut(s)	99
BstMAI	GTCTC	2 cut(s)	554, 610
BstMWI	GCNNNNNNNGC	7 cut(s)	246, 1295, 1604, 1683, 1835, 1844, 1847
BstNI	CCWGG	2 cut(s)	113, 822
BstNSI	RCATGY	2 cut(s)	602, 875
BstSCI	CCNGG	3 cut(s)	111, 793, 820
BstSFI	CTRYAG	1 cut(s)	2055
BstV1I	GCAGC	4 cut(s)	1582, 1825, 1834, 1975
BstV2I	GAAGAC	2 cut(s)	695, 1806
BstX2I	RGATCY	5 cut(s)	334, 1320, 1441, 1823, 2051
BstYI	RGATCY	5 cut(s)	334, 1320, 1441, 1823, 2051
Bsu36I	CCTNAGG	1 cut(s)	783
BsuI	GTATCC	2 cut(s)	380, 513
BsuRI	GGCC	4 cut(s)	224, 940, 1218, 1677
BtgI	CCRYGG	1 cut(s)	373
BtsCI	GGATG	6 cut(s)	91, 618, 804, 1378, 1661, 1882
BtsI	GCAGTG	2 cut(s)	1557, 1665
Cac8I	GCNNGC	2 cut(s)	436, 1499
CaiI	CAGNNNCTG	1 cut(s)	1838
CciI	TCATGA	2 cut(s)	382, 513
CfoI	GCGC	1 cut(s)	99
Cfr13I	GGNCC	2 cut(s)	778, 1216
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	7 cut(s)	92, 605, 949, 1587, 1764, 1770, 1853
CspCI	CAANNNNNGTGG	2 cut(s)	516, 551
CviAII	CATG	9 cut(s)	101, 188, 320, 374, 383, 514, 599, 758, 872
CviQI	GTAC	7 cut(s)	92, 605, 949, 1587, 1764, 1770, 1853
DdeI	CTNAG	9 cut(s)	430, 783, 1038, 1437, 1533, 1699, 1818, 2028, 2165
DinI	GGCGCC	1 cut(s)	98
DrdI	GACNNNNNNGTC	1 cut(s)	1028
DseDI	GACNNNNNNGTC	1 cut(s)	1028
Eam1104I	CTCTTC	4 cut(s)	1458, 1558, 1899, 1976
EarI	CTCTTC	4 cut(s)	1458, 1558, 1899, 1976
EciI	GGCGGA	1 cut(s)	227
Eco130I	CCWWGG	3 cut(s)	373, 1568, 1994
Eco147I	AGGCCT	1 cut(s)	940
Eco31I	GGTCTC	2 cut(s)	554, 610
Eco47I	GGWCC	1 cut(s)	778
Eco57I	CTGAAG	2 cut(s)	813, 1606
Eco81I	CCTNAGG	1 cut(s)	783
Eco88I	CYCGRG	1 cut(s)	2139
EcoRII	CCWGG	2 cut(s)	111, 820
EcoT14I	CCWWGG	3 cut(s)	373, 1568, 1994
EcoT22I	ATGCAT	1 cut(s)	1798
EgeI	GGCGCC	1 cut(s)	98
EheI	GGCGCC	1 cut(s)	98
ErhI	CCWWGG	3 cut(s)	373, 1568, 1994
FaeI	CATG	9 cut(s)	104, 191, 323, 377, 386, 517, 602, 761, 875
FalI	AAGNNNNNCTT	2 cut(s)	1173, 1205
FatI	CATG	9 cut(s)	100, 187, 319, 373, 382, 513, 598, 757, 871
FauI	CCCGC	1 cut(s)	1903
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	1694
Fnu4HI	GCNGC	5 cut(s)	1596, 1678, 1839, 1848, 1989
FokI	GGATG	6 cut(s)	98, 625, 811, 1385, 1648, 1889
Fsp4HI	GCNGC	5 cut(s)	1596, 1678, 1839, 1848, 1989
FspBI	CTAG	4 cut(s)	215, 665, 737, 1053
GlaI	GCGC	1 cut(s)	98
GluI	GCNGC	5 cut(s)	1596, 1678, 1839, 1848, 1989
GsuI	CTGGAG	1 cut(s)	417
HaeII	RGCGCY	1 cut(s)	100
HaeIII	GGCC	4 cut(s)	224, 940, 1218, 1677
HapII	CCGG	2 cut(s)	794, 1219
HhaI	GCGC	1 cut(s)	99
Hin1I	GRCGYC	2 cut(s)	97, 929
Hin1II	CATG	9 cut(s)	104, 191, 323, 377, 386, 517, 602, 761, 875
Hin6I	GCGC	1 cut(s)	97
HinP1I	GCGC	1 cut(s)	97
HincII	GTYRAC	3 cut(s)	210, 1033, 2062
HindII	GTYRAC	3 cut(s)	210, 1033, 2062
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	9 cut(s)	104, 232, 623, 857, 898, 919, 1241, 1786, 1886
HpaI	GTTAAC	1 cut(s)	2062
HpaII	CCGG	2 cut(s)	794, 1219
HphI	GGTGA	2 cut(s)	17, 188
Hpy166II	GTNNAC	8 cut(s)	210, 448, 778, 951, 1033, 1108, 1695, 2062
Hpy8I	GTNNAC	8 cut(s)	210, 448, 778, 951, 1033, 1108, 1695, 2062
Hpy99I	CGWCG	2 cut(s)	2096, 2099
HpyCH4III	ACNGT	5 cut(s)	295, 499, 908, 1453, 2159
HpyCH4IV	ACGT	4 cut(s)	929, 1344, 1507, 1691
HpyF10VI	GCNNNNNNNGC	7 cut(s)	246, 1295, 1604, 1683, 1835, 1844, 1847
HpyF3I	CTNAG	9 cut(s)	430, 783, 1038, 1437, 1533, 1699, 1818, 2028, 2165
HpySE526I	ACGT	4 cut(s)	929, 1344, 1507, 1691
Hsp92I	GRCGYC	2 cut(s)	97, 929
Hsp92II	CATG	9 cut(s)	104, 191, 323, 377, 386, 517, 602, 761, 875
HspAI	GCGC	1 cut(s)	97
KasI	GGCGCC	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	1767
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	2062
LmnI	GCTCC	4 cut(s)	882, 1083, 1221, 1996
Lsp1109I	GCAGC	4 cut(s)	1582, 1825, 1834, 1975
LweI	GCATC	4 cut(s)	1627, 1783, 1805, 1838
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	4 cut(s)	215, 665, 737, 1053
MaeII	ACGT	4 cut(s)	929, 1344, 1507, 1691
MaeIII	GTNAC	7 cut(s)	5, 1063, 1453, 1538, 1625, 2110, 2143
MflI	RGATCY	5 cut(s)	334, 1320, 1441, 1823, 2051
MhlI	GDGCHC	3 cut(s)	720, 879, 2164
Mly113I	GGCGCC	1 cut(s)	97
MlyI	GAGTC	1 cut(s)	1780
MmeI	TCCRAC	4 cut(s)	331, 618, 935, 1105
Mph1103I	ATGCAT	1 cut(s)	1798
MroXI	GAANNNNTTC	2 cut(s)	1251, 1962
MseI	TTAA	8 cut(s)	219, 891, 965, 1475, 1482, 1775, 2061, 2123
MslI	CAYNNNNRTG	2 cut(s)	345, 665
MspI	CCGG	2 cut(s)	794, 1219
MspR9I	CCNGG	3 cut(s)	113, 795, 822
Mva1269I	GAATGC	1 cut(s)	773
MvaI	CCWGG	2 cut(s)	113, 822
MwoI	GCNNNNNNNGC	7 cut(s)	246, 1295, 1604, 1683, 1835, 1844, 1847
NarI	GGCGCC	1 cut(s)	97
NciI	CCSGG	1 cut(s)	795
NcoI	CCATGG	1 cut(s)	373
NlaIII	CATG	9 cut(s)	104, 191, 323, 377, 386, 517, 602, 761, 875
NlaIV	GGNNCC	4 cut(s)	98, 780, 1443, 1765
NmuCI	GTSAC	5 cut(s)	5, 1453, 1625, 2110, 2143
NsiI	ATGCAT	1 cut(s)	1798
NspI	RCATGY	2 cut(s)	602, 875
NspV	TTCGAA	2 cut(s)	40, 1096
PagI	TCATGA	2 cut(s)	382, 513
PceI	AGGCCT	1 cut(s)	940
PcsI	WCGNNNNNNNCGW	1 cut(s)	771
PctI	GAATGC	1 cut(s)	773
PdmI	GAANNNNTTC	2 cut(s)	1251, 1962
PfeI	GAWTC	8 cut(s)	104, 232, 623, 857, 898, 919, 1241, 1886
PkrI	GCNGC	5 cut(s)	1597, 1679, 1840, 1849, 1990
PleI	GAGTC	1 cut(s)	1780
PluTI	GGCGCC	1 cut(s)	100
PpsI	GAGTC	1 cut(s)	1780
Psp6I	CCWGG	2 cut(s)	111, 820
PspGI	CCWGG	2 cut(s)	111, 820
PspN4I	GGNNCC	4 cut(s)	98, 780, 1443, 1765
PspPI	GGNCC	2 cut(s)	778, 1216
PstI	CTGCAG	1 cut(s)	2059
PstNI	CAGNNNCTG	1 cut(s)	1838
PsuI	RGATCY	5 cut(s)	334, 1320, 1441, 1823, 2051
RsaI	GTAC	7 cut(s)	93, 606, 950, 1588, 1765, 1771, 1854
RsaNI	GTAC	7 cut(s)	92, 605, 949, 1587, 1764, 1770, 1853
RseI	CAYNNNNRTG	2 cut(s)	345, 665
SaqAI	TTAA	8 cut(s)	219, 891, 965, 1475, 1482, 1775, 2061, 2123
SatI	GCNGC	5 cut(s)	1596, 1678, 1839, 1848, 1989
Sau96I	GGNCC	2 cut(s)	778, 1216
SchI	GAGTC	1 cut(s)	1780
ScrFI	CCNGG	3 cut(s)	113, 795, 822
SduI	GDGCHC	3 cut(s)	720, 879, 2164
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	4 cut(s)	1627, 1783, 1805, 1838
SfcI	CTRYAG	1 cut(s)	2055
SfoI	GGCGCC	1 cut(s)	98
SfuI	TTCGAA	2 cut(s)	40, 1096
SinI	GGWCC	1 cut(s)	778
SmiMI	CAYNNNNRTG	2 cut(s)	345, 665
SmlI	CTYRAG	1 cut(s)	627
SmoI	CTYRAG	1 cut(s)	627
SpeI	ACTAGT	1 cut(s)	214
SseBI	AGGCCT	1 cut(s)	940
SsiI	CCGC	3 cut(s)	238, 1678, 1910
SspDI	GGCGCC	1 cut(s)	96
SspI	AATATT	1 cut(s)	559
SspMI	CTAG	4 cut(s)	215, 665, 737, 1053
StuI	AGGCCT	1 cut(s)	940
StyD4I	CCNGG	3 cut(s)	111, 793, 820
StyI	CCWWGG	3 cut(s)	373, 1568, 1994
TaaI	ACNGT	5 cut(s)	295, 499, 908, 1453, 2159
TaiI	ACGT	4 cut(s)	932, 1347, 1510, 1694
TaqI	TCGA	5 cut(s)	40, 420, 1096, 1423, 1791
TaqII	GACCGA	1 cut(s)	1800
TatI	WGTACW	3 cut(s)	604, 948, 1586
TauI	GCSGC	1 cut(s)	1680
TfiI	GAWTC	8 cut(s)	104, 232, 623, 857, 898, 919, 1241, 1886
Tru1I	TTAA	8 cut(s)	219, 891, 965, 1475, 1482, 1775, 2061, 2123
Tru9I	TTAA	8 cut(s)	219, 891, 965, 1475, 1482, 1775, 2061, 2123
TseFI	GTSAC	5 cut(s)	5, 1453, 1625, 2110, 2143
TseI	GCWGC	4 cut(s)	1595, 1838, 1847, 1988
Tsp45I	GTSAC	5 cut(s)	5, 1453, 1625, 2110, 2143
TspGWI	ACGGA	3 cut(s)	71, 867, 1993
VpaK11BI	GGWCC	1 cut(s)	778
XapI	RAATTY	1 cut(s)	298
XceI	RCATGY	2 cut(s)	602, 875
XmiI	GTMKAC	1 cut(s)	1694
XmnI	GAANNNNTTC	2 cut(s)	1251, 1962
XspI	CTAG	4 cut(s)	215, 665, 737, 1053
ZraI	GACGTC	1 cut(s)	930
Zsp2I	ATGCAT	1 cut(s)	1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.