Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007973

Physical Location & Seq

Genomic Coordinates Reverse (-)

30018036 .. 30027488

Gene Structure 9453 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG255600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGGAGACTCGTTGAGGGAGGAATTTAGCGATACACTTCGTATACTTGTTGCTACGGATTGCCATCTGGGCTATTTGGAGAAGGATGAAGTGCGGCGGCATGATTCATTCCAGGCATTCGATGAGATATGCTTAATAGCGGAACAAAAGAATGTGGATTTTGTGCTCCTTGGTGGTGATCTTTTCCATGAGAATAAACCCTCAAGGTCAACACTAGTTAAGGCCATTGAGATTCTACGTCGTCATTGCCTCAGTGATCAGCCAGTGCAGTTTCAAGTTGTTAGCGACCAGACTGTGAATTTTGCAAATATGTTCGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGCTTGCCAGTGTTTAGTATTCATGGAAATCATGATGATCCTGCTGGAGTGGATAATCTTTCTGCTGTTGATATCCTCTCGGCATGCAATCTTGTAAACTATTTTGGGAAAATGGTTCTTGGGGGATCTGGTGTTGGTCAGATAACTCTGTCCCCTATTCTTATCAGGAAGGGTACAACATCCGTAGCTCTGTATGGTCTTGGAAACATTAGGGATGAACGGCTCAATAGAATGTTTCAGACCCCCCATGCTGTACAATGGATAAGACCTGAAAGCCAAGAAGGATTGCCACTGTCAGACTGGTTCAACATCCTTGTGCTTCATCAGAACAGAGTGAAGGCAAACCCAAAAAATGCCATAAATGAGCACATGTTACCAGAATTCCTGGACTTCATAGTGTGGGGACACGAACATGAATGCCTTGTTGACCCTCAGGAGGTTCTAGGGAAGGGGTTTCACATTACACAACCTGGTTCTTCAGTTGCAACATCATTGATTGATGGAGAATCAAAGCCAAAGCATGTGCTTCTTTTGGAAATTAAGGGGAATCAATATCGACCAACCAAGATTCCTTTGACGTCAGTGAGGCCTTTTGAGTACACCGAGGTCATATTAAAGGATGAACCTGAGATTGATCCCAACGATCAAAATTCGATTCTTGAACGGTTAGACGAAGTGGTCAGAAGGCTGATAGATAAATCTAGGAGCAATGCTGTTAACAGATCAGAGGTCAAACTTCCATTGGTTCGAGTAAAGGTAGACTATTCTGGATTTATGACAATAAATCCTCAAAAATTTGGACAAAAGTACGTTGGGAAGGTTGCAAACCCGCAAGACATTCTTATATTTACAAAGGCTTCAAAAAAGGGTCGGAGCGAAGGTAAATTTGATGATTCTGAACGACTTCGCCCAGAAGAACTAAATCAACAAAATATAGAGGCTCTAGTTGCTGAAAATAATCTGAAAATGGAGATCCTTCCTGTCAATGATTTGGATGTTGCACTACACAATTTTGTTAATAAAGATGAAAAAACGGCTTTCCATTCCTGCGTGTTGTACAATATTGAAGAAACTCGAAACAAAATTGCCCAGGATTCAGATCCTTTGAAATTTGAAGAGGAAGATTTGATCCTTAAAGTTGGAGAGTGCTTGGAGGATCGCCTGAAGGAAAGGTCTACACGCCCCAAGGATAGTTCCCAATTCACCTCCACGGCTGCATCCTTGGAGGGTTTCAGAGGCAAAAGTGCAGCAGGACTTGGAAGTGCAGTTTCCTTTAGTGATGATGAAGACACAACCCAGATGACTGGCTCAAAGTCTACTGCCAGAGGACGCAGGGGTTCAGTTAAGCCATCTTCTTCAGAAGTTGGTAAGGGTAAAACTTCTACAAGAGGAAGGGGTAGGGGTAGAGGTAGAGGCAGGGGATCCACTAACTTGAAGCAGACCACTCTTGATGCATCTCTTGGGATTCGCCATTCTCAGAGATCTGCATCAGTTTCTGCAAGTGCTGCAGTCCGAAGTATTGCTGATGATGACGATGATGTGGACGATGTAGATTCTCCTTCAAGTGAAGAAGGCATCAATGAGGTCAATAACAGTTCGGAAAATGAGGAAAGTGTTCAAGATAGAGGACGTAAAAGGGCTGCTCCAAGGGGAAGGGGTAGAGGTTCTACACAATCAAAGCGCGGAAAGAAATCAGACAATACGCCTGTTTACCGAATGCTTATGAACCAAGATGATGACGACGACGATGATGACTTGACAAAGAGATTCAATAAGCCTCCACCCCGGGTCACAAGAAATTATGGGGCTTTAAGAAGGGGCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000791 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0099086

KEGG Pathways

Metabolic & Signaling

ko03440 ko03450 ko04218 map03440 map03450 map04218

Pfam Domains

Protein Families

Metallophos Mre11_DNA_bind

Protein Analysis

725

Amino Acids

80.88

Weight (kDa)

5.92

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	13 - 257	6.7e-15	Calcineurin-like phosphoesterase
Mre11_DNA_bind	PF04152	303 - 455	1e-32	Mre11 DNA-binding presumed domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54260 AT5G54260
fragaria_vesca	FvH4_3g21040 FvH4_3g21040 FvH4_3g21040
malus_domestica	MD03G1218100.v1.1 MD11G1235900.v1.1
prunus_persica	Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1
pyrus_communis	pycom03g16760
rosa_chinensis	RchiOBHm_Chr5g0036071
rosa_laevigata	RLG00000033663
rosa_multiflora	Rmu_sc0000382.1_g000032
rosa_roxburghii	Rroxscaffold_1G00044680
rosa_rugosa	Rorug05G0152500 Rorug05G0152500
rosa_samantha	Rh5AG246700 Rh5BG247000 Rh5CG278100 Rh5DG255600
rosa_wichuraiana	Rw5G022640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1028
AatII	GACGTC	1 cut(s)	932
AccI	GTMKAC	4 cut(s)	43, 1110, 1526, 1667
AccII	CGCG	1 cut(s)	2034
AciI	CCGC	5 cut(s)	94, 97, 140, 1181, 2034
AcsI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
AcuI	CTGAAG	3 cut(s)	813, 1535, 1692
AcyI	GRCGYC	1 cut(s)	929
AfaI	GTAC	5 cut(s)	526, 606, 950, 1160, 1409
AfiI	CCNNNNNNNGG	1 cut(s)	787
AflIII	ACRYGT	1 cut(s)	720
AhlI	ACTAGT	1 cut(s)	214
AjnI	CCWGG	4 cut(s)	111, 735, 820, 1440
AluBI	AGCT	1 cut(s)	539
AluI	AGCT	1 cut(s)	539
Alw21I	GWGCWC	2 cut(s)	168, 720
AlwNI	CAGNNNCTG	1 cut(s)	1847
Ama87I	CYCGRG	1 cut(s)	2136
AoxI	GGCC	2 cut(s)	222, 938
ApeKI	GCWGC	4 cut(s)	1565, 1598, 1856, 1991
ApoI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
Asp700I	GAANNNNTTC	2 cut(s)	1254, 1965
AspLEI	GCGC	1 cut(s)	2034
AsuC2I	CCSGG	2 cut(s)	2137, 2138
AsuHPI	GGTGA	2 cut(s)	188, 1546
AvaI	CYCGRG	1 cut(s)	2136
AxyI	CCTNAGG	1 cut(s)	783
BamHI	GGATCC	1 cut(s)	1772
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	2 cut(s)	168, 720
BbvI	GCAGC	4 cut(s)	1552, 1610, 1843, 1978
BccI	CCATC	3 cut(s)	72, 845, 1708
BceAI	ACGGC	3 cut(s)	587, 1401, 1578
BciT130I	CCWGG	4 cut(s)	113, 737, 822, 1442
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	2 cut(s)	2137, 2138
BcuI	ACTAGT	1 cut(s)	214
BfaI	CTAG	4 cut(s)	215, 794, 1053, 1295
BfmI	CTRYAG	1 cut(s)	1857
BglI	GCCNNNNNGGC	1 cut(s)	69
BglII	AGATCT	1 cut(s)	1832
BisI	GCNGC	6 cut(s)	95, 98, 1566, 1599, 1857, 1992
BlsI	GCNGC	6 cut(s)	96, 99, 1567, 1600, 1858, 1993
Bme1390I	CCNGG	6 cut(s)	113, 737, 822, 1442, 2137, 2138
BmeT110I	CYCGRG	1 cut(s)	2136
BmiI	GGNNCC	1 cut(s)	1774
BmrFI	CCNGG	6 cut(s)	113, 737, 822, 1442, 2137, 2138
BmsI	GCATC	5 cut(s)	1577, 1792, 1814, 1847, 1935
BpiI	GAAGAC	1 cut(s)	1644
BpmI	CTGGAG	1 cut(s)	417
BpuEI	CTTGAG	1 cut(s)	187
BpuMI	CCSGG	2 cut(s)	2137, 2138
BsaBI	GATNNNNATC	3 cut(s)	63, 1449, 1837
BsaHI	GRCGYC	1 cut(s)	929
BsaJI	CCNNGG	9 cut(s)	169, 954, 1440, 1536, 1560, 1572, 1997, 2135, 2136
BsaXI	ACNNNNNCTCC	2 cut(s)	1216, 1246
Bsc4I	CCNNNNNNNGG	1 cut(s)	787
Bse1I	ACTGG	4 cut(s)	263, 359, 656, 1660
Bse21I	CCTNAGG	1 cut(s)	783
Bse3DI	GCAATG	2 cut(s)	244, 1066
Bse8I	GATNNNNATC	3 cut(s)	63, 1449, 1837
BseBI	CCWGG	4 cut(s)	113, 737, 822, 1442
BseDI	CCNNGG	9 cut(s)	169, 954, 1440, 1536, 1560, 1572, 1997, 2135, 2136
BseGI	GGATG	7 cut(s)	91, 530, 571, 660, 976, 1351, 1568
BseJI	GATNNNNATC	3 cut(s)	63, 1449, 1837
BseLI	CCNNNNNNNGG	1 cut(s)	787
BseMI	GCAATG	2 cut(s)	244, 1066
BseMII	CTCAG	4 cut(s)	265, 797, 969, 1841
BseNI	ACTGG	4 cut(s)	263, 359, 656, 1660
BseXI	GCAGC	4 cut(s)	1552, 1610, 1843, 1978
BsgI	GTGCAG	3 cut(s)	287, 1617, 1635
Bsh1236I	CGCG	1 cut(s)	2034
BshFI	GGCC	2 cut(s)	224, 940
BsiHKAI	GWGCWC	2 cut(s)	168, 720
BsiHKCI	CYCGRG	1 cut(s)	2136
BsiSI	CCGG	1 cut(s)	2137
BslFI	GGGAC	2 cut(s)	487, 768
BslI	CCNNNNNNNGG	1 cut(s)	787
BsmFI	GGGAC	2 cut(s)	487, 768
BsmI	GAATGC	3 cut(s)	116, 773, 2073
BsnI	GGCC	2 cut(s)	224, 940
BsoBI	CYCGRG	1 cut(s)	2136
Bsp1286I	GDGCHC	2 cut(s)	168, 720
Bsp1407I	TGTACA	2 cut(s)	604, 1407
BspACI	CCGC	5 cut(s)	94, 97, 140, 1181, 2034
BspANI	GGCC	2 cut(s)	224, 940
BspCNI	CTCAG	4 cut(s)	264, 796, 970, 1840
BspFNI	CGCG	1 cut(s)	2034
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	1 cut(s)	1774
BspMAI	CTGCAG	1 cut(s)	1861
BsrDI	GCAATG	2 cut(s)	244, 1066
BsrGI	TGTACA	2 cut(s)	604, 1407
BsrI	ACTGG	4 cut(s)	263, 359, 656, 1660
BssECI	CCNNGG	9 cut(s)	169, 954, 1440, 1536, 1560, 1572, 1997, 2135, 2136
BssNAI	GTATAC	1 cut(s)	44
BssNI	GRCGYC	1 cut(s)	929
BssT1I	CCWWGG	4 cut(s)	169, 1536, 1572, 1997
Bst1107I	GTATAC	1 cut(s)	44
Bst2UI	CCWGG	4 cut(s)	113, 737, 822, 1442
Bst4CI	ACNGT	4 cut(s)	295, 645, 1017, 1946
Bst6I	CTCTTC	1 cut(s)	1461
BstACI	GRCGYC	1 cut(s)	929
BstAPI	GCANNNNNTGC	1 cut(s)	1856
BstAUI	TGTACA	2 cut(s)	604, 1407
BstC8I	GCNNGC	2 cut(s)	356, 436
BstDEI	CTNAG	4 cut(s)	251, 783, 978, 1827
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	7 cut(s)	91, 530, 571, 660, 976, 1351, 1568
BstFNI	CGCG	1 cut(s)	2034
BstHHI	GCGC	1 cut(s)	2034
BstMWI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1856
BstNI	CCWGG	4 cut(s)	113, 737, 822, 1442
BstNSI	RCATGY	3 cut(s)	438, 724, 875
BstSCI	CCNGG	6 cut(s)	111, 735, 820, 1440, 2135, 2136
BstSFI	CTRYAG	1 cut(s)	1857
BstUI	CGCG	1 cut(s)	2034
BstV1I	GCAGC	4 cut(s)	1552, 1610, 1843, 1978
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1772, 1832
BstXI	CCANNNNNNTGG	1 cut(s)	1655
BstYI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1772, 1832
BstZ17I	GTATAC	1 cut(s)	44
Bsu36I	CCTNAGG	1 cut(s)	783
BsuRI	GGCC	2 cut(s)	224, 940
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	7 cut(s)	91, 530, 571, 660, 976, 1351, 1568
BtsIMutI	CAGTG	5 cut(s)	259, 270, 366, 641, 939
Cac8I	GCNNGC	2 cut(s)	356, 436
CaiI	CAGNNNCTG	1 cut(s)	1847
CciI	TCATGA	1 cut(s)	382
CfoI	GCGC	1 cut(s)	2034
Cfr9I	CCCGGG	1 cut(s)	2136
CseI	GACGC	1 cut(s)	1689
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	5 cut(s)	525, 605, 949, 1159, 1408
CviQI	GTAC	5 cut(s)	525, 605, 949, 1159, 1408
DdeI	CTNAG	4 cut(s)	251, 783, 978, 1827
DrdI	GACNNNNNNGTC	1 cut(s)	1028
DseDI	GACNNNNNNGTC	1 cut(s)	1028
Eam1104I	CTCTTC	1 cut(s)	1461
EarI	CTCTTC	1 cut(s)	1461
Eco130I	CCWWGG	4 cut(s)	169, 1536, 1572, 1997
Eco147I	AGGCCT	1 cut(s)	940
Eco32I	GATATC	1 cut(s)	424
Eco57I	CTGAAG	3 cut(s)	813, 1535, 1692
Eco81I	CCTNAGG	1 cut(s)	783
Eco88I	CYCGRG	1 cut(s)	2136
EcoRI	GAATTC	1 cut(s)	731
EcoRII	CCWGG	4 cut(s)	111, 735, 820, 1440
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	4 cut(s)	169, 1536, 1572, 1997
EcoT22I	ATGCAT	1 cut(s)	1807
ErhI	CCWWGG	4 cut(s)	169, 1536, 1572, 1997
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	2 cut(s)	487, 768
FauI	CCCGC	1 cut(s)	1188
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	4 cut(s)	43, 1110, 1526, 1667
Fnu4HI	GCNGC	6 cut(s)	95, 98, 1566, 1599, 1857, 1992
FokI	GGATG	7 cut(s)	98, 517, 578, 647, 983, 1358, 1555
Fsp4HI	GCNGC	6 cut(s)	95, 98, 1566, 1599, 1857, 1992
FspBI	CTAG	4 cut(s)	215, 794, 1053, 1295
GlaI	GCGC	1 cut(s)	2033
GluI	GCNGC	6 cut(s)	95, 98, 1566, 1599, 1857, 1992
GsuI	CTGGAG	1 cut(s)	417
HaeIII	GGCC	2 cut(s)	224, 940
HapII	CCGG	1 cut(s)	2137
HgaI	GACGC	1 cut(s)	1689
HhaI	GCGC	1 cut(s)	2034
Hin1I	GRCGYC	1 cut(s)	929
Hin6I	GCGC	1 cut(s)	2032
HinP1I	GCGC	1 cut(s)	2032
HincII	GTYRAC	3 cut(s)	210, 778, 1069
HindII	GTYRAC	3 cut(s)	210, 778, 1069
HpaI	GTTAAC	1 cut(s)	1069
HpaII	CCGG	1 cut(s)	2137
HphI	GGTGA	2 cut(s)	188, 1546
Hpy188III	TCNNGA	7 cut(s)	383, 517, 785, 1010, 1119, 1799, 1970
Hpy99I	CGWCG	3 cut(s)	243, 2096, 2099
HpyCH4III	ACNGT	4 cut(s)	295, 645, 1017, 1946
HpyCH4IV	ACGT	4 cut(s)	238, 929, 1161, 1981
HpyF10VI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1856
HpyF3I	CTNAG	4 cut(s)	251, 783, 978, 1827
HpySE526I	ACGT	4 cut(s)	238, 929, 1161, 1981
Hsp92I	GRCGYC	1 cut(s)	929
HspAI	GCGC	1 cut(s)	2032
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	1069
LmnI	GCTCC	4 cut(s)	171, 1056, 1224, 1999
Lsp1109I	GCAGC	4 cut(s)	1552, 1610, 1843, 1978
LweI	GCATC	5 cut(s)	1577, 1792, 1814, 1847, 1935
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	4 cut(s)	215, 794, 1053, 1295
MaeII	ACGT	4 cut(s)	238, 929, 1161, 1981
MaeIII	GTNAC	2 cut(s)	723, 2140
MflI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1772, 1832
MhlI	GDGCHC	2 cut(s)	168, 720
MlyI	GAGTC	1 cut(s)	2
MmeI	TCCRAC	2 cut(s)	1202, 1471
Mph1103I	ATGCAT	1 cut(s)	1807
MroXI	GAANNNNTTC	2 cut(s)	1254, 1965
MseI	TTAA	9 cut(s)	134, 219, 891, 965, 1068, 1368, 1485, 1695, 2162
MslI	CAYNNNNRTG	3 cut(s)	345, 665, 762
MspI	CCGG	1 cut(s)	2137
MspR9I	CCNGG	6 cut(s)	113, 737, 822, 1442, 2137, 2138
Mva1269I	GAATGC	3 cut(s)	116, 773, 2073
MvaI	CCWGG	4 cut(s)	113, 737, 822, 1442
MvnI	CGCG	1 cut(s)	2034
MwoI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1856
NciI	CCSGG	2 cut(s)	2137, 2138
NlaIV	GGNNCC	1 cut(s)	1774
NmeAIII	GCCGAG	1 cut(s)	410
NmuCI	GTSAC	1 cut(s)	2140
NsiI	ATGCAT	1 cut(s)	1807
NspI	RCATGY	3 cut(s)	438, 724, 875
PaeI	GCATGC	1 cut(s)	438
PagI	TCATGA	1 cut(s)	382
PceI	AGGCCT	1 cut(s)	940
PciI	ACATGT	1 cut(s)	720
PctI	GAATGC	3 cut(s)	116, 773, 2073
PdmI	GAANNNNTTC	2 cut(s)	1254, 1965
PfoI	TCCNGGA	1 cut(s)	735
PkrI	GCNGC	6 cut(s)	96, 99, 1567, 1600, 1858, 1993
PleI	GAGTC	1 cut(s)	2
PpsI	GAGTC	1 cut(s)	2
PscI	ACATGT	1 cut(s)	720
Psp6I	CCWGG	4 cut(s)	111, 735, 820, 1440
PspGI	CCWGG	4 cut(s)	111, 735, 820, 1440
PspN4I	GGNNCC	1 cut(s)	1774
PstI	CTGCAG	1 cut(s)	1861
PstNI	CAGNNNCTG	1 cut(s)	1847
PsuI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1772, 1832
RsaI	GTAC	5 cut(s)	526, 606, 950, 1160, 1409
RsaNI	GTAC	5 cut(s)	525, 605, 949, 1159, 1408
RseI	CAYNNNNRTG	3 cut(s)	345, 665, 762
SaqAI	TTAA	9 cut(s)	134, 219, 891, 965, 1068, 1368, 1485, 1695, 2162
SatI	GCNGC	6 cut(s)	95, 98, 1566, 1599, 1857, 1992
SchI	GAGTC	1 cut(s)	2
ScrFI	CCNGG	6 cut(s)	113, 737, 822, 1442, 2137, 2138
SduI	GDGCHC	2 cut(s)	168, 720
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	5 cut(s)	1577, 1792, 1814, 1847, 1935
SfcI	CTRYAG	1 cut(s)	1857
SmaI	CCCGGG	1 cut(s)	2138
SmiMI	CAYNNNNRTG	3 cut(s)	345, 665, 762
SmlI	CTYRAG	1 cut(s)	202
SmoI	CTYRAG	1 cut(s)	202
SpeI	ACTAGT	1 cut(s)	214
SphI	GCATGC	1 cut(s)	438
SseBI	AGGCCT	1 cut(s)	940
SsiI	CCGC	5 cut(s)	94, 97, 140, 1181, 2034
SspI	AATATT	1 cut(s)	1414
SspMI	CTAG	4 cut(s)	215, 794, 1053, 1295
StuI	AGGCCT	1 cut(s)	940
StyD4I	CCNGG	6 cut(s)	111, 735, 820, 1440, 2135, 2136
StyI	CCWWGG	4 cut(s)	169, 1536, 1572, 1997
TaaI	ACNGT	4 cut(s)	295, 645, 1017, 1946
TaiI	ACGT	4 cut(s)	241, 932, 1164, 1984
TaqI	TCGA	5 cut(s)	120, 907, 1004, 1099, 1426
TaqII	GACCGA	1 cut(s)	305
TatI	WGTACW	3 cut(s)	604, 948, 1407
TauI	GCSGC	2 cut(s)	97, 100
Tru1I	TTAA	9 cut(s)	134, 219, 891, 965, 1068, 1368, 1485, 1695, 2162
Tru9I	TTAA	9 cut(s)	134, 219, 891, 965, 1068, 1368, 1485, 1695, 2162
TscAI	CASTG	5 cut(s)	259, 270, 366, 648, 939
TseFI	GTSAC	1 cut(s)	2140
TseI	GCWGC	4 cut(s)	1565, 1598, 1856, 1991
Tsp45I	GTSAC	1 cut(s)	2140
TspGWI	ACGGA	2 cut(s)	71, 523
TspMI	CCCGGG	1 cut(s)	2136
TspRI	CASTG	5 cut(s)	259, 270, 366, 648, 939
XapI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
XceI	RCATGY	3 cut(s)	438, 724, 875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	648
XmaI	CCCGGG	1 cut(s)	2136
XmiI	GTMKAC	4 cut(s)	43, 1110, 1526, 1667
XmnI	GAANNNNTTC	2 cut(s)	1254, 1965
XspI	CTAG	4 cut(s)	215, 794, 1053, 1295
ZraI	GACGTC	1 cut(s)	930
Zsp2I	ATGCAT	1 cut(s)	1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.