Double-strand break repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54260 AT5G54260 |
| fragaria_vesca | FvH4_3g21040 FvH4_3g21040 FvH4_3g21040 |
| malus_domestica | MD03G1218100.v1.1 MD11G1235900.v1.1 |
| prunus_persica | Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 |
| pyrus_communis | pycom03g16760 |
| rosa_chinensis | RchiOBHm_Chr5g0036071 |
| rosa_laevigata | RLG00000033663 |
| rosa_multiflora | Rmu_sc0000382.1_g000032 |
| rosa_roxburghii | Rroxscaffold_1G00044680 |
| rosa_rugosa | Rorug05G0152500 Rorug05G0152500 |
| rosa_samantha | Rh5AG246700 Rh5BG247000 Rh5CG278100 Rh5DG255600 |
| rosa_wichuraiana | Rw5G022640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1028 |
| AatII | GACGTC | 2 cut(s) | 932, 1697 |
| AccB1I | GGYRCC | 1 cut(s) | 1760 |
| AciI | CCGC | 8 cut(s) | 97, 140, 174, 1071, 1616, 1681, 1845, 1862 |
| AcsI | RAATTY | 2 cut(s) | 298, 1950 |
| AcuI | CTGAAG | 2 cut(s) | 813, 1609 |
| AcyI | GRCGYC | 2 cut(s) | 929, 1694 |
| AfaI | GTAC | 4 cut(s) | 606, 950, 1591, 1768 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 800, 1105, 1967 |
| AflIII | ACRYGT | 1 cut(s) | 1510 |
| AgsI | TTSAA | 9 cut(s) | 204, 346, 658, 1013, 1212, 1418, 1466, 1774, 1853 |
| AhlI | ACTAGT | 1 cut(s) | 214 |
| AjnI | CCWGG | 3 cut(s) | 111, 793, 820 |
| AluBI | AGCT | 3 cut(s) | 1081, 1232, 2046 |
| AluI | AGCT | 3 cut(s) | 1081, 1232, 2046 |
| Alw21I | GWGCWC | 2 cut(s) | 720, 879 |
| Alw26I | GTCTC | 2 cut(s) | 554, 610 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 295, 1454, 1835 |
| Ama87I | CYCGRG | 1 cut(s) | 2133 |
| AoxI | GGCC | 6 cut(s) | 222, 537, 938, 1219, 1523, 1678 |
| ApeKI | GCWGC | 3 cut(s) | 1598, 1835, 1982 |
| ApoI | RAATTY | 2 cut(s) | 298, 1950 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1254, 1953 |
| AspS9I | GGNCC | 3 cut(s) | 538, 1096, 1219 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 188 |
| AsuII | TTCGAA | 1 cut(s) | 40 |
| AvaI | CYCGRG | 1 cut(s) | 2133 |
| AvaII | GGWCC | 1 cut(s) | 1096 |
| AxyI | CCTNAGG | 1 cut(s) | 783 |
| BaeGI | GKGCMC | 1 cut(s) | 1763 |
| BamHI | GGATCC | 2 cut(s) | 778, 1444 |
| BanI | GGYRCC | 1 cut(s) | 1760 |
| BauI | CACGAG | 2 cut(s) | 773, 2140 |
| BbsI | GAAGAC | 1 cut(s) | 695 |
| Bbv12I | GWGCWC | 2 cut(s) | 720, 879 |
| BbvI | GCAGC | 3 cut(s) | 1585, 1822, 1969 |
| BccI | CCATC | 5 cut(s) | 72, 793, 845, 1862, 2026 |
| BceAI | ACGGC | 3 cut(s) | 110, 587, 1268 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 374, 408, 2114, 2148 |
| BciT130I | CCWGG | 3 cut(s) | 113, 795, 822 |
| BciVI | GTATCC | 1 cut(s) | 513 |
| BclI | TGATCA | 1 cut(s) | 256 |
| BcoDI | GTCTC | 2 cut(s) | 554, 610 |
| BcuI | ACTAGT | 1 cut(s) | 214 |
| BfaI | CTAG | 3 cut(s) | 215, 665, 1053 |
| BfmI | CTRYAG | 1 cut(s) | 2049 |
| BfuI | GTATCC | 1 cut(s) | 513 |
| BglII | AGATCT | 1 cut(s) | 1820 |
| BisI | GCNGC | 6 cut(s) | 98, 1599, 1681, 1836, 1845, 1983 |
| BlsI | GCNGC | 6 cut(s) | 99, 1600, 1682, 1837, 1846, 1984 |
| Bme1390I | CCNGG | 3 cut(s) | 113, 795, 822 |
| Bme18I | GGWCC | 1 cut(s) | 1096 |
| BmeT110I | CYCGRG | 1 cut(s) | 2133 |
| BmgT120I | GGNCC | 3 cut(s) | 538, 1096, 1219 |
| BmiI | GGNNCC | 3 cut(s) | 780, 1446, 1762 |
| BmrFI | CCNGG | 3 cut(s) | 113, 795, 822 |
| BmsI | GCATC | 5 cut(s) | 1630, 1780, 1802, 1835, 2134 |
| BpiI | GAAGAC | 1 cut(s) | 695 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 116, 148 |
| BpmI | CTGGAG | 1 cut(s) | 417 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1440 |
| Bpu14I | TTCGAA | 1 cut(s) | 40 |
| BpuEI | CTTGAG | 1 cut(s) | 612 |
| Bsa29I | ATCGAT | 1 cut(s) | 849 |
| BsaBI | GATNNNNATC | 2 cut(s) | 63, 1825 |
| BsaHI | GRCGYC | 2 cut(s) | 929, 1694 |
| BsaI | GGTCTC | 2 cut(s) | 554, 610 |
| BsaJI | CCNNGG | 4 cut(s) | 794, 1571, 1988, 2132 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1549, 1579, 1863, 1893 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 800, 1105, 1967 |
| Bse1I | ACTGG | 5 cut(s) | 263, 359, 656, 1660, 1764 |
| Bse21I | CCTNAGG | 1 cut(s) | 783 |
| Bse3DI | GCAATG | 3 cut(s) | 244, 1347, 1650 |
| Bse8I | GATNNNNATC | 2 cut(s) | 63, 1825 |
| BseBI | CCWGG | 3 cut(s) | 113, 795, 822 |
| BseCI | ATCGAT | 1 cut(s) | 849 |
| BseDI | CCNNGG | 4 cut(s) | 794, 1571, 1988, 2132 |
| BseGI | GGATG | 6 cut(s) | 91, 618, 804, 1381, 1664, 1870 |
| BseJI | GATNNNNATC | 2 cut(s) | 63, 1825 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 800, 1105, 1967 |
| BseMI | GCAATG | 3 cut(s) | 244, 1347, 1650 |
| BseMII | CTCAG | 5 cut(s) | 444, 797, 1716, 1829, 1880 |
| BseNI | ACTGG | 5 cut(s) | 263, 359, 656, 1660, 1764 |
| BseRI | GAGGAG | 1 cut(s) | 1557 |
| BseSI | GKGCMC | 1 cut(s) | 1763 |
| BseXI | GCAGC | 3 cut(s) | 1585, 1822, 1969 |
| BsgI | GTGCAG | 1 cut(s) | 287 |
| BshFI | GGCC | 6 cut(s) | 224, 539, 940, 1221, 1525, 1680 |
| BshNI | GGYRCC | 1 cut(s) | 1760 |
| BshVI | ATCGAT | 1 cut(s) | 849 |
| BsiHKAI | GWGCWC | 2 cut(s) | 720, 879 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2133 |
| BsiSI | CCGG | 1 cut(s) | 1222 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 800, 1105, 1967 |
| BsmAI | GTCTC | 2 cut(s) | 554, 610 |
| BsmI | GAATGC | 2 cut(s) | 773, 1810 |
| BsnI | GGCC | 6 cut(s) | 224, 539, 940, 1221, 1525, 1680 |
| Bso31I | GGTCTC | 2 cut(s) | 554, 610 |
| BsoBI | CYCGRG | 1 cut(s) | 2133 |
| Bsp119I | TTCGAA | 1 cut(s) | 40 |
| Bsp1286I | GDGCHC | 3 cut(s) | 720, 879, 1763 |
| Bsp1407I | TGTACA | 1 cut(s) | 604 |
| BspACI | CCGC | 8 cut(s) | 97, 140, 174, 1071, 1616, 1681, 1845, 1862 |
| BspANI | GGCC | 6 cut(s) | 224, 539, 940, 1221, 1525, 1680 |
| BspCNI | CTCAG | 5 cut(s) | 443, 796, 1715, 1828, 1881 |
| BspDI | ATCGAT | 1 cut(s) | 849 |
| BspHI | TCATGA | 1 cut(s) | 513 |
| BspLI | GGNNCC | 3 cut(s) | 780, 1446, 1762 |
| BspMAI | CTGCAG | 1 cut(s) | 2053 |
| BspT104I | TTCGAA | 1 cut(s) | 40 |
| BspT107I | GGYRCC | 1 cut(s) | 1760 |
| BspTNI | GGTCTC | 2 cut(s) | 554, 610 |
| BsrDI | GCAATG | 3 cut(s) | 244, 1347, 1650 |
| BsrGI | TGTACA | 1 cut(s) | 604 |
| BsrI | ACTGG | 5 cut(s) | 263, 359, 656, 1660, 1764 |
| BssECI | CCNNGG | 4 cut(s) | 794, 1571, 1988, 2132 |
| BssNI | GRCGYC | 2 cut(s) | 929, 1694 |
| BssSI | CACGAG | 2 cut(s) | 773, 2140 |
| BssT1I | CCWWGG | 2 cut(s) | 1571, 1988 |
| Bst2BI | CACGAG | 2 cut(s) | 773, 2140 |
| Bst2UI | CCWGG | 3 cut(s) | 113, 795, 822 |
| Bst4CI | ACNGT | 4 cut(s) | 499, 908, 1456, 1934 |
| Bst6I | CTCTTC | 2 cut(s) | 1461, 1890 |
| BstACI | GRCGYC | 2 cut(s) | 929, 1694 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1832 |
| BstAUI | TGTACA | 1 cut(s) | 604 |
| BstBI | TTCGAA | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 1 cut(s) | 436 |
| BstDEI | CTNAG | 9 cut(s) | 26, 430, 783, 1440, 1536, 1702, 1815, 1889, 2159 |
| BstF5I | GGATG | 6 cut(s) | 91, 618, 804, 1381, 1664, 1870 |
| BstMAI | GTCTC | 2 cut(s) | 554, 610 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1298, 1607, 1686, 1832, 1841, 1844 |
| BstNI | CCWGG | 3 cut(s) | 113, 795, 822 |
| BstNSI | RCATGY | 2 cut(s) | 602, 875 |
| BstSCI | CCNGG | 3 cut(s) | 111, 793, 820 |
| BstSFI | CTRYAG | 1 cut(s) | 2049 |
| BstSLI | GKGCMC | 1 cut(s) | 1763 |
| BstV1I | GCAGC | 3 cut(s) | 1585, 1822, 1969 |
| BstV2I | GAAGAC | 1 cut(s) | 695 |
| BstX2I | RGATCY | 6 cut(s) | 22, 334, 778, 1323, 1444, 1820 |
| BstYI | RGATCY | 6 cut(s) | 22, 334, 778, 1323, 1444, 1820 |
| Bsu15I | ATCGAT | 1 cut(s) | 849 |
| Bsu36I | CCTNAGG | 1 cut(s) | 783 |
| BsuI | GTATCC | 1 cut(s) | 513 |
| BsuRI | GGCC | 6 cut(s) | 224, 539, 940, 1221, 1525, 1680 |
| BsuTUI | ATCGAT | 1 cut(s) | 849 |
| BtsCI | GGATG | 6 cut(s) | 91, 618, 804, 1381, 1664, 1870 |
| BtsI | GCAGTG | 2 cut(s) | 1557, 1668 |
| BtsIMutI | CAGTG | 8 cut(s) | 270, 495, 540, 842, 939, 1557, 1633, 1668 |
| Cac8I | GCNNGC | 1 cut(s) | 436 |
| CaiI | CAGNNNCTG | 3 cut(s) | 295, 1454, 1835 |
| CciI | TCATGA | 1 cut(s) | 513 |
| Cfr13I | GGNCC | 3 cut(s) | 538, 1096, 1219 |
| ClaI | ATCGAT | 1 cut(s) | 849 |
| CsiI | ACCWGGT | 1 cut(s) | 820 |
| Csp6I | GTAC | 4 cut(s) | 605, 949, 1590, 1767 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 516, 551 |
| CviAII | CATG | 9 cut(s) | 101, 188, 320, 374, 514, 599, 758, 764, 872 |
| CviQI | GTAC | 4 cut(s) | 605, 949, 1590, 1767 |
| DdeI | CTNAG | 9 cut(s) | 26, 430, 783, 1440, 1536, 1702, 1815, 1889, 2159 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1028 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1028 |
| Eam1104I | CTCTTC | 2 cut(s) | 1461, 1890 |
| EarI | CTCTTC | 2 cut(s) | 1461, 1890 |
| Eco130I | CCWWGG | 2 cut(s) | 1571, 1988 |
| Eco147I | AGGCCT | 1 cut(s) | 1525 |
| Eco31I | GGTCTC | 2 cut(s) | 554, 610 |
| Eco47I | GGWCC | 1 cut(s) | 1096 |
| Eco57I | CTGAAG | 2 cut(s) | 813, 1609 |
| Eco81I | CCTNAGG | 1 cut(s) | 783 |
| Eco88I | CYCGRG | 1 cut(s) | 2133 |
| EcoRII | CCWGG | 3 cut(s) | 111, 793, 820 |
| EcoT14I | CCWWGG | 2 cut(s) | 1571, 1988 |
| EcoT22I | ATGCAT | 1 cut(s) | 1795 |
| ErhI | CCWWGG | 2 cut(s) | 1571, 1988 |
| FaeI | CATG | 9 cut(s) | 104, 191, 323, 377, 517, 602, 761, 767, 875 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1176, 1208 |
| FatI | CATG | 9 cut(s) | 100, 187, 319, 373, 513, 598, 757, 763, 871 |
| FbaI | TGATCA | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 6 cut(s) | 98, 1599, 1681, 1836, 1845, 1983 |
| FokI | GGATG | 6 cut(s) | 98, 625, 811, 1388, 1651, 1877 |
| Fsp4HI | GCNGC | 6 cut(s) | 98, 1599, 1681, 1836, 1845, 1983 |
| FspBI | CTAG | 3 cut(s) | 215, 665, 1053 |
| GluI | GCNGC | 6 cut(s) | 98, 1599, 1681, 1836, 1845, 1983 |
| GsuI | CTGGAG | 1 cut(s) | 417 |
| HaeIII | GGCC | 6 cut(s) | 224, 539, 940, 1221, 1525, 1680 |
| HapII | CCGG | 1 cut(s) | 1222 |
| Hin1I | GRCGYC | 2 cut(s) | 929, 1694 |
| Hin1II | CATG | 9 cut(s) | 104, 191, 323, 377, 517, 602, 761, 767, 875 |
| HincII | GTYRAC | 4 cut(s) | 210, 1033, 1927, 2056 |
| HindII | GTYRAC | 4 cut(s) | 210, 1033, 1927, 2056 |
| HpaI | GTTAAC | 1 cut(s) | 2056 |
| HpaII | CCGG | 1 cut(s) | 1222 |
| HphI | GGTGA | 2 cut(s) | 17, 188 |
| Hpy166II | GTNNAC | 8 cut(s) | 210, 448, 951, 1033, 1111, 1698, 1927, 2056 |
| Hpy8I | GTNNAC | 8 cut(s) | 210, 448, 951, 1033, 1111, 1698, 1927, 2056 |
| Hpy99I | CGWCG | 3 cut(s) | 243, 389, 2093 |
| HpyCH4III | ACNGT | 4 cut(s) | 499, 908, 1456, 1934 |
| HpyCH4IV | ACGT | 4 cut(s) | 929, 1510, 1694, 2026 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1298, 1607, 1686, 1832, 1841, 1844 |
| HpyF3I | CTNAG | 9 cut(s) | 26, 430, 783, 1440, 1536, 1702, 1815, 1889, 2159 |
| HpySE526I | ACGT | 4 cut(s) | 929, 1510, 1694, 2026 |
| Hsp92I | GRCGYC | 2 cut(s) | 929, 1694 |
| Hsp92II | CATG | 9 cut(s) | 104, 191, 323, 377, 517, 602, 761, 767, 875 |
| Ksp22I | TGATCA | 1 cut(s) | 256 |
| KspAI | GTTAAC | 1 cut(s) | 2056 |
| LmnI | GCTCC | 4 cut(s) | 882, 1086, 1746, 1990 |
| Lsp1109I | GCAGC | 3 cut(s) | 1585, 1822, 1969 |
| LweI | GCATC | 5 cut(s) | 1630, 1780, 1802, 1835, 2134 |
| MabI | ACCWGGT | 1 cut(s) | 820 |
| MaeI | CTAG | 3 cut(s) | 215, 665, 1053 |
| MaeII | ACGT | 4 cut(s) | 929, 1510, 1694, 2026 |
| MaeIII | GTNAC | 4 cut(s) | 5, 1456, 2104, 2137 |
| MflI | RGATCY | 6 cut(s) | 22, 334, 778, 1323, 1444, 1820 |
| MhlI | GDGCHC | 3 cut(s) | 720, 879, 1763 |
| MlyI | GAGTC | 3 cut(s) | 286, 1777, 1907 |
| MmeI | TCCRAC | 5 cut(s) | 331, 618, 935, 1108, 1471 |
| Mph1103I | ATGCAT | 1 cut(s) | 1795 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1254, 1953 |
| MseI | TTAA | 7 cut(s) | 219, 891, 965, 1478, 1485, 2055, 2117 |
| MslI | CAYNNNNRTG | 3 cut(s) | 345, 665, 762 |
| MspA1I | CMGCKG | 1 cut(s) | 1847 |
| MspI | CCGG | 1 cut(s) | 1222 |
| MspR9I | CCNGG | 3 cut(s) | 113, 795, 822 |
| Mva1269I | GAATGC | 2 cut(s) | 773, 1810 |
| MvaI | CCWGG | 3 cut(s) | 113, 795, 822 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1298, 1607, 1686, 1832, 1841, 1844 |
| NlaIII | CATG | 9 cut(s) | 104, 191, 323, 377, 517, 602, 761, 767, 875 |
| NlaIV | GGNNCC | 3 cut(s) | 780, 1446, 1762 |
| NmuCI | GTSAC | 3 cut(s) | 5, 2104, 2137 |
| NsiI | ATGCAT | 1 cut(s) | 1795 |
| NspI | RCATGY | 2 cut(s) | 602, 875 |
| NspV | TTCGAA | 1 cut(s) | 40 |
| PagI | TCATGA | 1 cut(s) | 513 |
| PceI | AGGCCT | 1 cut(s) | 1525 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2085 |
| PctI | GAATGC | 2 cut(s) | 773, 1810 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1254, 1953 |
| PfeI | GAWTC | 8 cut(s) | 104, 232, 623, 857, 898, 919, 1244, 1883 |
| PkrI | GCNGC | 6 cut(s) | 99, 1600, 1682, 1837, 1846, 1984 |
| PleI | GAGTC | 3 cut(s) | 286, 1777, 1906 |
| PpsI | GAGTC | 3 cut(s) | 286, 1777, 1906 |
| Psp6I | CCWGG | 3 cut(s) | 111, 793, 820 |
| PspGI | CCWGG | 3 cut(s) | 111, 793, 820 |
| PspN4I | GGNNCC | 3 cut(s) | 780, 1446, 1762 |
| PspPI | GGNCC | 3 cut(s) | 538, 1096, 1219 |
| PstI | CTGCAG | 1 cut(s) | 2053 |
| PstNI | CAGNNNCTG | 3 cut(s) | 295, 1454, 1835 |
| PsuI | RGATCY | 6 cut(s) | 22, 334, 778, 1323, 1444, 1820 |
| RsaI | GTAC | 4 cut(s) | 606, 950, 1591, 1768 |
| RsaNI | GTAC | 4 cut(s) | 605, 949, 1590, 1767 |
| RseI | CAYNNNNRTG | 3 cut(s) | 345, 665, 762 |
| SaqAI | TTAA | 7 cut(s) | 219, 891, 965, 1478, 1485, 2055, 2117 |
| SatI | GCNGC | 6 cut(s) | 98, 1599, 1681, 1836, 1845, 1983 |
| Sau96I | GGNCC | 3 cut(s) | 538, 1096, 1219 |
| SchI | GAGTC | 3 cut(s) | 286, 1777, 1907 |
| ScrFI | CCNGG | 3 cut(s) | 113, 795, 822 |
| SduI | GDGCHC | 3 cut(s) | 720, 879, 1763 |
| SexAI | ACCWGGT | 1 cut(s) | 820 |
| SfaNI | GCATC | 5 cut(s) | 1630, 1780, 1802, 1835, 2134 |
| SfcI | CTRYAG | 1 cut(s) | 2049 |
| SfuI | TTCGAA | 1 cut(s) | 40 |
| SinI | GGWCC | 1 cut(s) | 1096 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 345, 665, 762 |
| SmlI | CTYRAG | 1 cut(s) | 627 |
| SmoI | CTYRAG | 1 cut(s) | 627 |
| SpeI | ACTAGT | 1 cut(s) | 214 |
| SseBI | AGGCCT | 1 cut(s) | 1525 |
| SsiI | CCGC | 8 cut(s) | 97, 140, 174, 1071, 1616, 1681, 1845, 1862 |
| SspI | AATATT | 1 cut(s) | 559 |
| SspMI | CTAG | 3 cut(s) | 215, 665, 1053 |
| StuI | AGGCCT | 1 cut(s) | 1525 |
| StyD4I | CCNGG | 3 cut(s) | 111, 793, 820 |
| StyI | CCWWGG | 2 cut(s) | 1571, 1988 |
| TaaI | ACNGT | 4 cut(s) | 499, 908, 1456, 1934 |
| TaiI | ACGT | 4 cut(s) | 932, 1513, 1697, 2029 |
| TaqI | TCGA | 6 cut(s) | 40, 420, 738, 849, 1426, 1788 |
| TatI | WGTACW | 2 cut(s) | 604, 948 |
| TauI | GCSGC | 3 cut(s) | 100, 1683, 1847 |
| TfiI | GAWTC | 8 cut(s) | 104, 232, 623, 857, 898, 919, 1244, 1883 |
| Tru1I | TTAA | 7 cut(s) | 219, 891, 965, 1478, 1485, 2055, 2117 |
| Tru9I | TTAA | 7 cut(s) | 219, 891, 965, 1478, 1485, 2055, 2117 |
| TscAI | CASTG | 8 cut(s) | 270, 502, 540, 849, 939, 1564, 1633, 1675 |
| TseFI | GTSAC | 3 cut(s) | 5, 2104, 2137 |
| TseI | GCWGC | 3 cut(s) | 1598, 1835, 1982 |
| Tsp45I | GTSAC | 3 cut(s) | 5, 2104, 2137 |
| TspGWI | ACGGA | 3 cut(s) | 71, 227, 1987 |
| TspRI | CASTG | 8 cut(s) | 270, 502, 540, 849, 939, 1564, 1633, 1675 |
| VpaK11BI | GGWCC | 1 cut(s) | 1096 |
| XapI | RAATTY | 2 cut(s) | 298, 1950 |
| XceI | RCATGY | 2 cut(s) | 602, 875 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1254, 1953 |
| XspI | CTAG | 3 cut(s) | 215, 665, 1053 |
| ZraI | GACGTC | 2 cut(s) | 930, 1695 |
| Zsp2I | ATGCAT | 1 cut(s) | 1795 |