Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007973

Physical Location & Seq

Genomic Coordinates Reverse (-)

30275411 .. 30285130

Gene Structure 9720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG278100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGGAGACTCGTCGAGGGAGGAATTTAGCGATACACTTCGCATACTTGTTGCTACGGATTGCCATCTGGGCTATTTGGAGAAGGATGAAGTGCGGCGGCATGATTCATTCCAGGCATTCGATGAGATATGCTCAATAGCGGAACAAAAGAATGTGGATTTTGTGCTCCTTGGTGGTGATCTTTTCCATGAGAATAAACCCTCAAGGTCAACACTAGTTAAGGCCATTGAGATTCTACGTCGTCATTGCCTCAGTGATCAGCCAGTGCAGTTTCAAGTTGTTAGTGACCAGACTGTGAATTTTGCAAATATGTTCGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGCTTGCCAGTGTTTAGTATTCATGGAAATCATGATGATCCTGCTGGAGTGGATAATCTTTCTGCTGTTGATATCCTTTCGGCATGCAATCTTGTAAACTATTTTGGGAAAATGGTTCTTGGGGGATCTGGTGTTGGTCAGATAACTCTGTCCCCTATTCTTATCAGGAAGGGTACAACATCCGTAGCTCTTTATGGTCTTGGAAACATTAGGGATGAACGGCTCAATAGAATGTTTCAGAGCCCCCATGCTGTACAATGGATAAGACCTGAAAGCCAAGAAGGATTGCCACTGTCAGACTGGTTCAACATCCTTGTGCTTCATCAGAACAGAGTGAAGGCAAACCCAAAAAATGCCATAAATGAGCACATGTTACCAGAATTCCTGGACTTCATAGTGTGGGGACACGAACATGAATGCCTTGTTGACCCTCAGGAGGTTCTAGGGAAGGGGTTTCACATTACACAACCTGGTTCTTCAGTTGCAACATCATTGATTGATGGAGAATCAAAGCCAAAGCATGTGCTTCTTTTGGAAATTAAGGGGAATCAATATCGACCAACCAAGATTCCTTTGACGTCAGTGAGGCCTTTTGAGTACACCGAGGTCATATTAAAGGATGAACCTGAGATTGATCCCAACGATCAAAATTCGATTCTTGAACGGTTAGACGAAGTGGTCAGAAGGCTGATAGATAAATCTAGGAGCAATGCTGTTAACAGATCAGAGGTCAAACTTCCATTAGTTCGAGTAAAGGTAGACTATTCTGGATTTATGACAATAAATCCTCAAAAATTTGGACAAAAGTATGTTGGGAAGGTTGCAAACCCGCAAGACATTCTTATATTTACAAAGGCTTCAAAAAAGAGTCGGAGCGAAGGTAAATTTGATGATTCTGAACGACTTCGCCCAGAAGAACTAAATCAACAAAATATAGAGGCTCTAGTTGCTGAAAATAATCTGAAAATGGAGATCCTTCCTGTCAATGATTTGGATGTTGCACTACACAATTTTGTTAATAAAGATGAAAAAACGGCTTTCCATTCCTGCGTGTTGTACAATATTCAAGAAACTCGAAACAAAATTGCCCAGGATTCAGATCCTTTGAAATTTGAAGAGGAAGATTTGATCCTTAAAGTTGGAGAGTGCTTGGAGGATCGCCTGAAGGAAAGGTCTACACGCCCCAAGGATAGTTCCCAATTCACCTCCACAGCTGCATCCTTGGAGGGTTTCAGAGGCAAAAGTGCAGCAGGACTTGGAAGTGCAGTTTCCTTCAGTGATGATGAAGACACAACCCAGATGACTGGCTCAAAGTCTACTGCCAGAGGACGCAGGGGTTCAGTTAAGCCATCCTCTTCAGAAGTTGGTAAGGGTAAAACTTCTACAAGAGGAAGGGGTAGAGGTAGAGGCAGGGGATCCACTAACTTGAAGCAGACCACTCTTGATGCAGCTCTTGGGATTCGCCATTCTCAGAGATCTGCATCAGTTTCTGCAAGTGCTGCAGTCCGAAGTATTGCTGATGATGATGATGATGTGGATGATGTGGATTCTCCTTCAAGTGAAGAAGGCATCAATGAGGTCAATAACAGTTCGGAAAATGAGGAAAGTGTTCAAGATAGAGGACGTAAAAGGGCTGCTCCAAGGGGAAGAGGTAGAGGTTCTACACAATCAAAGCGTGGAAAGAAATCGGACAGTACGCCTGTTTACCGAATGCTTATGAACCAAGATGATGATGATGATGACGATGACGTGACAAAGAGATTCAATAAGCCTCCACCCCGGGTCACAAGAAATTATGGGGCTTTAAGAAGGGGCAATTTGCAATCATTAAACCTCAGTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000791 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0099086

KEGG Pathways

Metabolic & Signaling

ko03440 ko03450 ko04218 map03440 map03450 map04218

Pfam Domains

Protein Families

Metallophos Mre11_DNA_bind

Protein Analysis

731

Amino Acids

81.43

Weight (kDa)

5.92

Isoelectric Point (pI)

49.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	13 - 257	5.6e-15	Calcineurin-like phosphoesterase
Mre11_DNA_bind	PF04152	303 - 455	8.3e-33	Mre11 DNA-binding presumed domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54260 AT5G54260
fragaria_vesca	FvH4_3g21040 FvH4_3g21040 FvH4_3g21040
malus_domestica	MD03G1218100.v1.1 MD11G1235900.v1.1
prunus_persica	Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1
pyrus_communis	pycom03g16760
rosa_chinensis	RchiOBHm_Chr5g0036071
rosa_laevigata	RLG00000033663
rosa_multiflora	Rmu_sc0000382.1_g000032
rosa_roxburghii	Rroxscaffold_1G00044680
rosa_rugosa	Rorug05G0152500 Rorug05G0152500
rosa_samantha	Rh5AG246700 Rh5BG247000 Rh5CG278100 Rh5DG255600
rosa_wichuraiana	Rw5G022640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1028
AatII	GACGTC	1 cut(s)	932
AccI	GTMKAC	3 cut(s)	1110, 1526, 1667
AciI	CCGC	4 cut(s)	94, 97, 140, 1181
AcsI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
AcuI	CTGAAG	4 cut(s)	813, 1535, 1609, 1692
AcyI	GRCGYC	1 cut(s)	929
AfaI	GTAC	6 cut(s)	526, 606, 950, 1409, 2047, 2191
AfiI	CCNNNNNNNGG	1 cut(s)	787
AflIII	ACRYGT	1 cut(s)	720
AhlI	ACTAGT	1 cut(s)	214
AjiI	CACGTC	1 cut(s)	2101
AjnI	CCWGG	4 cut(s)	111, 735, 820, 1440
AluBI	AGCT	3 cut(s)	539, 1565, 1802
AluI	AGCT	3 cut(s)	539, 1565, 1802
Alw21I	GWGCWC	2 cut(s)	168, 720
AlwNI	CAGNNNCTG	1 cut(s)	1841
Ama87I	CYCGRG	1 cut(s)	2130
AoxI	GGCC	2 cut(s)	222, 938
ApeKI	GCWGC	5 cut(s)	1565, 1598, 1799, 1850, 1985
ApoI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
Asp700I	GAANNNNTTC	2 cut(s)	1254, 1959
AsuC2I	CCSGG	2 cut(s)	2131, 2132
AsuHPI	GGTGA	2 cut(s)	188, 1546
AvaI	CYCGRG	1 cut(s)	2130
AxyI	CCTNAGG	1 cut(s)	783
BamHI	GGATCC	1 cut(s)	1766
BanII	GRGCYC	1 cut(s)	596
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	2 cut(s)	168, 720
BbvI	GCAGC	5 cut(s)	1552, 1610, 1811, 1837, 1972
BccI	CCATC	3 cut(s)	72, 845, 1708
BceAI	ACGGC	2 cut(s)	587, 1401
BciT130I	CCWGG	4 cut(s)	113, 737, 822, 1442
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	2 cut(s)	2131, 2132
BcuI	ACTAGT	1 cut(s)	214
BfaI	CTAG	4 cut(s)	215, 794, 1053, 1295
BfmI	CTRYAG	1 cut(s)	1851
BglI	GCCNNNNNGGC	1 cut(s)	69
BglII	AGATCT	1 cut(s)	1826
BisI	GCNGC	7 cut(s)	95, 98, 1566, 1599, 1800, 1851, 1986
BlsI	GCNGC	7 cut(s)	96, 99, 1567, 1600, 1801, 1852, 1987
BmcAI	AGTACT	1 cut(s)	2191
Bme1390I	CCNGG	6 cut(s)	113, 737, 822, 1442, 2131, 2132
BmeT110I	CYCGRG	1 cut(s)	2130
BmgBI	CACGTC	1 cut(s)	2101
BmiI	GGNNCC	1 cut(s)	1768
BmrFI	CCNGG	6 cut(s)	113, 737, 822, 1442, 2131, 2132
BmsI	GCATC	4 cut(s)	1577, 1786, 1841, 1929
BpiI	GAAGAC	1 cut(s)	1644
BplI	GAGNNNNNCTC	2 cut(s)	116, 148
BpmI	CTGGAG	1 cut(s)	417
BpuEI	CTTGAG	1 cut(s)	187
BpuMI	CCSGG	2 cut(s)	2131, 2132
BsaBI	GATNNNNATC	3 cut(s)	63, 1449, 1831
BsaHI	GRCGYC	1 cut(s)	929
BsaJI	CCNNGG	8 cut(s)	169, 954, 1440, 1536, 1572, 1991, 2129, 2130
BsaXI	ACNNNNNCTCC	2 cut(s)	1216, 1246
Bsc4I	CCNNNNNNNGG	1 cut(s)	787
Bse1I	ACTGG	4 cut(s)	263, 359, 656, 1660
Bse21I	CCTNAGG	1 cut(s)	783
Bse3DI	GCAATG	2 cut(s)	244, 1066
Bse8I	GATNNNNATC	3 cut(s)	63, 1449, 1831
BseBI	CCWGG	4 cut(s)	113, 737, 822, 1442
BseDI	CCNNGG	8 cut(s)	169, 954, 1440, 1536, 1572, 1991, 2129, 2130
BseGI	GGATG	9 cut(s)	91, 530, 571, 660, 976, 1351, 1568, 1700, 1894
BseJI	GATNNNNATC	3 cut(s)	63, 1449, 1831
BseLI	CCNNNNNNNGG	1 cut(s)	787
BseMI	GCAATG	2 cut(s)	244, 1066
BseMII	CTCAG	4 cut(s)	265, 797, 969, 1835
BseNI	ACTGG	4 cut(s)	263, 359, 656, 1660
BseXI	GCAGC	5 cut(s)	1552, 1610, 1811, 1837, 1972
BsgI	GTGCAG	3 cut(s)	287, 1617, 1635
BshFI	GGCC	2 cut(s)	224, 940
BsiHKAI	GWGCWC	2 cut(s)	168, 720
BsiHKCI	CYCGRG	1 cut(s)	2130
BsiSI	CCGG	1 cut(s)	2131
BslFI	GGGAC	2 cut(s)	487, 768
BslI	CCNNNNNNNGG	1 cut(s)	787
BsmFI	GGGAC	2 cut(s)	487, 768
BsmI	GAATGC	3 cut(s)	116, 773, 2067
BsnI	GGCC	2 cut(s)	224, 940
BsoBI	CYCGRG	1 cut(s)	2130
Bsp1286I	GDGCHC	3 cut(s)	168, 596, 720
Bsp1407I	TGTACA	2 cut(s)	604, 1407
BspACI	CCGC	4 cut(s)	94, 97, 140, 1181
BspANI	GGCC	2 cut(s)	224, 940
BspCNI	CTCAG	4 cut(s)	264, 796, 970, 1834
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	1 cut(s)	1768
BspMAI	CTGCAG	1 cut(s)	1855
BsrDI	GCAATG	2 cut(s)	244, 1066
BsrGI	TGTACA	2 cut(s)	604, 1407
BsrI	ACTGG	4 cut(s)	263, 359, 656, 1660
BssECI	CCNNGG	8 cut(s)	169, 954, 1440, 1536, 1572, 1991, 2129, 2130
BssNI	GRCGYC	1 cut(s)	929
BssT1I	CCWWGG	4 cut(s)	169, 1536, 1572, 1991
Bst2UI	CCWGG	4 cut(s)	113, 737, 822, 1442
Bst4CI	ACNGT	5 cut(s)	295, 645, 1017, 1940, 2045
Bst6I	CTCTTC	3 cut(s)	1461, 1711, 1993
BstACI	GRCGYC	1 cut(s)	929
BstAPI	GCANNNNNTGC	1 cut(s)	1850
BstAUI	TGTACA	2 cut(s)	604, 1407
BstC8I	GCNNGC	2 cut(s)	356, 436
BstDEI	CTNAG	5 cut(s)	251, 783, 978, 1821, 2186
BstF5I	GGATG	9 cut(s)	91, 530, 571, 660, 976, 1351, 1568, 1700, 1894
BstMWI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1850
BstNI	CCWGG	4 cut(s)	113, 737, 822, 1442
BstNSI	RCATGY	3 cut(s)	438, 724, 875
BstSCI	CCNGG	6 cut(s)	111, 735, 820, 1440, 2129, 2130
BstSFI	CTRYAG	1 cut(s)	1851
BstV1I	GCAGC	5 cut(s)	1552, 1610, 1811, 1837, 1972
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1766, 1826
BstXI	CCANNNNNNTGG	1 cut(s)	1655
BstYI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1766, 1826
Bsu36I	CCTNAGG	1 cut(s)	783
BsuRI	GGCC	2 cut(s)	224, 940
BtrI	CACGTC	1 cut(s)	2101
BtsCI	GGATG	9 cut(s)	91, 530, 571, 660, 976, 1351, 1568, 1700, 1894
BtsIMutI	CAGTG	6 cut(s)	259, 270, 366, 641, 939, 1633
Cac8I	GCNNGC	2 cut(s)	356, 436
CaiI	CAGNNNCTG	1 cut(s)	1841
CciI	TCATGA	1 cut(s)	382
Cfr9I	CCCGGG	1 cut(s)	2130
CseI	GACGC	1 cut(s)	1689
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	6 cut(s)	525, 605, 949, 1408, 2046, 2190
CviQI	GTAC	6 cut(s)	525, 605, 949, 1408, 2046, 2190
DdeI	CTNAG	5 cut(s)	251, 783, 978, 1821, 2186
DrdI	GACNNNNNNGTC	1 cut(s)	1028
DseDI	GACNNNNNNGTC	1 cut(s)	1028
Eam1104I	CTCTTC	3 cut(s)	1461, 1711, 1993
EarI	CTCTTC	3 cut(s)	1461, 1711, 1993
Eco130I	CCWWGG	4 cut(s)	169, 1536, 1572, 1991
Eco147I	AGGCCT	1 cut(s)	940
Eco24I	GRGCYC	1 cut(s)	596
Eco32I	GATATC	1 cut(s)	424
Eco57I	CTGAAG	4 cut(s)	813, 1535, 1609, 1692
Eco81I	CCTNAGG	1 cut(s)	783
Eco88I	CYCGRG	1 cut(s)	2130
EcoRI	GAATTC	1 cut(s)	731
EcoRII	CCWGG	4 cut(s)	111, 735, 820, 1440
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	4 cut(s)	169, 1536, 1572, 1991
EcoT38I	GRGCYC	1 cut(s)	596
ErhI	CCWWGG	4 cut(s)	169, 1536, 1572, 1991
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	2 cut(s)	487, 768
FauI	CCCGC	1 cut(s)	1188
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	3 cut(s)	1110, 1526, 1667
Fnu4HI	GCNGC	7 cut(s)	95, 98, 1566, 1599, 1800, 1851, 1986
FokI	GGATG	9 cut(s)	98, 517, 578, 647, 983, 1358, 1555, 1687, 1901
FriOI	GRGCYC	1 cut(s)	596
Fsp4HI	GCNGC	7 cut(s)	95, 98, 1566, 1599, 1800, 1851, 1986
FspBI	CTAG	4 cut(s)	215, 794, 1053, 1295
GluI	GCNGC	7 cut(s)	95, 98, 1566, 1599, 1800, 1851, 1986
GsuI	CTGGAG	1 cut(s)	417
HaeIII	GGCC	2 cut(s)	224, 940
HapII	CCGG	1 cut(s)	2131
HgaI	GACGC	1 cut(s)	1689
Hin1I	GRCGYC	1 cut(s)	929
HincII	GTYRAC	3 cut(s)	210, 778, 1069
HindII	GTYRAC	3 cut(s)	210, 778, 1069
HpaI	GTTAAC	1 cut(s)	1069
HpaII	CCGG	1 cut(s)	2131
HphI	GGTGA	2 cut(s)	188, 1546
Hpy166II	GTNNAC	9 cut(s)	210, 448, 778, 951, 1069, 1111, 1527, 1668, 2056
Hpy188III	TCNNGA	8 cut(s)	383, 517, 785, 1010, 1119, 1418, 1793, 1964
Hpy8I	GTNNAC	9 cut(s)	210, 448, 778, 951, 1069, 1111, 1527, 1668, 2056
Hpy99I	CGWCG	2 cut(s)	16, 243
HpyCH4III	ACNGT	5 cut(s)	295, 645, 1017, 1940, 2045
HpyCH4IV	ACGT	4 cut(s)	238, 929, 1975, 2100
HpyF10VI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1850
HpyF3I	CTNAG	5 cut(s)	251, 783, 978, 1821, 2186
HpySE526I	ACGT	4 cut(s)	238, 929, 1975, 2100
Hsp92I	GRCGYC	1 cut(s)	929
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	1069
LmnI	GCTCC	4 cut(s)	171, 1056, 1224, 1993
Lsp1109I	GCAGC	5 cut(s)	1552, 1610, 1811, 1837, 1972
LweI	GCATC	4 cut(s)	1577, 1786, 1841, 1929
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	4 cut(s)	215, 794, 1053, 1295
MaeII	ACGT	4 cut(s)	238, 929, 1975, 2100
MaeIII	GTNAC	4 cut(s)	284, 723, 2101, 2134
MboII	GAAGA	9 cut(s)	344, 819, 1277, 1478, 1484, 1649, 1698, 1925, 2010
MflI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1766, 1826
MhlI	GDGCHC	3 cut(s)	168, 596, 720
MlyI	GAGTC	2 cut(s)	2, 1228
MmeI	TCCRAC	2 cut(s)	1202, 1471
MroXI	GAANNNNTTC	2 cut(s)	1254, 1959
MslI	CAYNNNNRTG	3 cut(s)	345, 665, 762
MspA1I	CMGCKG	1 cut(s)	1565
MspI	CCGG	1 cut(s)	2131
MspR9I	CCNGG	6 cut(s)	113, 737, 822, 1442, 2131, 2132
Mva1269I	GAATGC	3 cut(s)	116, 773, 2067
MvaI	CCWGG	4 cut(s)	113, 737, 822, 1442
MwoI	GCNNNNNNNGC	3 cut(s)	69, 1298, 1850
NciI	CCSGG	2 cut(s)	2131, 2132
NlaIV	GGNNCC	1 cut(s)	1768
NmuCI	GTSAC	3 cut(s)	284, 2101, 2134
NspI	RCATGY	3 cut(s)	438, 724, 875
PaeI	GCATGC	1 cut(s)	438
PagI	TCATGA	1 cut(s)	382
PceI	AGGCCT	1 cut(s)	940
PciI	ACATGT	1 cut(s)	720
PctI	GAATGC	3 cut(s)	116, 773, 2067
PdmI	GAANNNNTTC	2 cut(s)	1254, 1959
PfoI	TCCNGGA	1 cut(s)	735
PkrI	GCNGC	7 cut(s)	96, 99, 1567, 1600, 1801, 1852, 1987
PleI	GAGTC	2 cut(s)	2, 1227
PpsI	GAGTC	2 cut(s)	2, 1227
PscI	ACATGT	1 cut(s)	720
Psp6I	CCWGG	4 cut(s)	111, 735, 820, 1440
PspGI	CCWGG	4 cut(s)	111, 735, 820, 1440
PspN4I	GGNNCC	1 cut(s)	1768
PstI	CTGCAG	1 cut(s)	1855
PstNI	CAGNNNCTG	1 cut(s)	1841
PsuI	RGATCY	6 cut(s)	334, 476, 1323, 1450, 1766, 1826
PvuII	CAGCTG	1 cut(s)	1565
RsaI	GTAC	6 cut(s)	526, 606, 950, 1409, 2047, 2191
RsaNI	GTAC	6 cut(s)	525, 605, 949, 1408, 2046, 2190
RseI	CAYNNNNRTG	3 cut(s)	345, 665, 762
SatI	GCNGC	7 cut(s)	95, 98, 1566, 1599, 1800, 1851, 1986
ScaI	AGTACT	1 cut(s)	2191
SchI	GAGTC	2 cut(s)	2, 1228
ScrFI	CCNGG	6 cut(s)	113, 737, 822, 1442, 2131, 2132
SduI	GDGCHC	3 cut(s)	168, 596, 720
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	4 cut(s)	1577, 1786, 1841, 1929
SfcI	CTRYAG	1 cut(s)	1851
SmaI	CCCGGG	1 cut(s)	2132
SmiMI	CAYNNNNRTG	3 cut(s)	345, 665, 762
SmlI	CTYRAG	1 cut(s)	202
SmoI	CTYRAG	1 cut(s)	202
SpeI	ACTAGT	1 cut(s)	214
SphI	GCATGC	1 cut(s)	438
SseBI	AGGCCT	1 cut(s)	940
SsiI	CCGC	4 cut(s)	94, 97, 140, 1181
SspI	AATATT	1 cut(s)	1414
SspMI	CTAG	4 cut(s)	215, 794, 1053, 1295
StuI	AGGCCT	1 cut(s)	940
StyD4I	CCNGG	6 cut(s)	111, 735, 820, 1440, 2129, 2130
StyI	CCWWGG	4 cut(s)	169, 1536, 1572, 1991
TaaI	ACNGT	5 cut(s)	295, 645, 1017, 1940, 2045
TaiI	ACGT	4 cut(s)	241, 932, 1978, 2103
TaqI	TCGA	6 cut(s)	14, 120, 907, 1004, 1099, 1426
TaqII	GACCGA	1 cut(s)	305
TatI	WGTACW	4 cut(s)	604, 948, 1407, 2189
TauI	GCSGC	2 cut(s)	97, 100
TscAI	CASTG	6 cut(s)	259, 270, 366, 648, 939, 1633
TseFI	GTSAC	3 cut(s)	284, 2101, 2134
TseI	GCWGC	5 cut(s)	1565, 1598, 1799, 1850, 1985
Tsp45I	GTSAC	3 cut(s)	284, 2101, 2134
TspGWI	ACGGA	2 cut(s)	71, 523
TspMI	CCCGGG	1 cut(s)	2130
TspRI	CASTG	6 cut(s)	259, 270, 366, 648, 939, 1633
XapI	RAATTY	7 cut(s)	23, 298, 731, 1000, 1145, 1235, 1460
XceI	RCATGY	3 cut(s)	438, 724, 875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	648
XmaI	CCCGGG	1 cut(s)	2130
XmiI	GTMKAC	3 cut(s)	1110, 1526, 1667
XmnI	GAANNNNTTC	2 cut(s)	1254, 1959
XspI	CTAG	4 cut(s)	215, 794, 1053, 1295
ZraI	GACGTC	1 cut(s)	930
ZrmI	AGTACT	1 cut(s)	2191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.