Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000382.1

Orthogroup ID

OG0007973

Physical Location & Seq

Genomic Coordinates Forward (+)

170126 .. 181743

Gene Structure 11618 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000382.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

atgaaggttatggaggaagttgtggaggaaaacgaagtgaagcctttgactgccgaggaattggagcagtacgagtccgacggcgatgaagatgaggatgatgacgacgatgtccaggaggtcgtacagtcctccggtggccctccagttcagtcaatagacgacgacgatgatgaggacgaagaagacaaggaagatacgacggtcaccaccacttctgatgaagcaacgaaacccgatcaacacgatctcggcaaatgctatagtgataggattgaggttgaagttctctttacttttctgggtaaatgttcatacctcgggttgatgatgaagaggatgagtggcctccaaacttgcacctaccagcaacctgcgccgatcccagcagtagctgcccagccagaccggcctctcacctgcccaccgcgcacggcctcgcatacccttccagatcgctccaccgcgcacctcgacatcgacctcgtcgctgctgcctctgccatcggctcttccttcctgcggttctccctccaaaccccaatctcccgaggccctccgacagccggtggcctgaggcggctgcctcagttggcaaccctcagggccacctctgccgtgatggacgacgtgtaccattcttgggtcgagcttcaaacttggagtaccaaagtgatagttttgcatagtcgggtactgaagttaggagtcgtccttaccctaaaccctagcacaggggtgaatactagcgactgcagtatgggagactcgtcgagggaggaatttagcgatacacttcgtatacttgttgctacggattgccatctgggctatttggagaaggatgaagtgcggcggcatgattcattccaggcattcgatgagatatgcttaatagcggaacaaaagaatgtggattttgtgctccttggtggtgatcttttccatgagaataagccctcaaggtcaacactagttaaggccattgagattctacgtcgtcattgcctcagtgatcagccagtgcagtttcaagttgttagcgaccagactgtgaattttgcaaatatgttcggtcatgtaaattatgaagatcctcacttcaatgttggcttgccagtgtttagtattcatggaaatcatgatgatcctgctggagtggataatctttctgctgttgatatcctctcggcatgcaatcttgtaaactattttgggaaaatggttcttgggggatctggtgttggtcagataactctgtcccctattcttatcaggaagggtacaacatccgtagctctgtatggtcttggaaacattagggatgaacggctcaatagaatgtttcagaccccccatgctgtacaatggataagacctgaaagccaagaaggattgccactgtcagactggttcaacatccttgtgcttcatcagaacagagtgaaggcaaacccaaaaaatgccataaatgagcacatgttaccagaattcctggacttcatagtgtggggacacgaacatgaatgccttgttgaccctcaggaggttctagggaaggggtttcacattacacaacctggttcttcagttgcaacatcattgattgatggagaatcaaagccaaagcatgtgcttcttttggaaattaaggggaatcaatatcgaccaaccaagattcctttgacgtcagtgaggccttttgagtacaccgaggtcatattaaaggatgaacctgagattgatcccaacaatcaaaattcgattcttgaacggttagacgaagtggtcagaaggctgatagataaatctaggagcaatgctgttaacagatcagaggtcaaacttccattagttcgagtaaaggtagactattctggatttatgacaataaatcctcaaaaatttggacaaaagtacgttgggaaggttgcaaacccgcaagacattcttatatttacaaaggcttcaaaaaagggtcggagcgaaggtaaatttgatgattctgaacgacttcgcccagaagaactaaatcaacaaaatatagaggctctagttgctgaaaataatctgaaaatggagatccttcctgtcaatgatttggatgttgcactacacaattttgttaataaagatgaaaaaacggctttccattcctgcgtgttgtacaatattgaagaaactcgaaacaaaattgcccaggattcagatcctttgaaatttgaagaggaagatttgatccttaaagttggagagtgcttggaggatcgcctgaaggaaaggtctacacgccccaaggatagttcccaattcacctccacggctgcatccttggagggtttcagaggcaaaagtgcagcaggacttggaagtgcagtttcctttagtgatgatgaagacacaacccagatgactggctcaaagtctactgccagaggacgcaggggttcagttaagccatcttcttcagaagttggtaagggtaaaacttctacaagaggaaggggtagaggtagaggcaggggatccactaacttgaagcagaccactcttgatgcatctcttgggattcgccattctcagagatctgcatcagtttctgcaagtgctgcagtccgaagtattgctgatgatgacgatgatgtggacgatgtagattctccttcaagtgaagaaggcatcaatgaggtcaataacagttcgggtgaattccggttagatgctccaatgggggaggccaattgctgcttctcccctcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000791 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0099086

KEGG Pathways

Metabolic & Signaling

ko03440 ko03450 ko04218 map03440 map03450 map04218

Pfam Domains

Protein Families

Metallophos Mre11_DNA_bind

Protein Analysis

920

Amino Acids

101.74

Weight (kDa)

4.96

Isoelectric Point (pI)

48.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54260 AT5G54260
fragaria_vesca	FvH4_3g21040 FvH4_3g21040 FvH4_3g21040
malus_domestica	MD03G1218100.v1.1 MD11G1235900.v1.1
prunus_persica	Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1 Prupe.4G191100_v2.0.a1
pyrus_communis	pycom03g16760
rosa_chinensis	RchiOBHm_Chr5g0036071
rosa_laevigata	RLG00000033663
rosa_multiflora	Rmu_sc0000382.1_g000032
rosa_roxburghii	Rroxscaffold_1G00044680
rosa_rugosa	Rorug05G0152500 Rorug05G0152500
rosa_samantha	Rh5AG246700 Rh5BG247000 Rh5CG278100 Rh5DG255600
rosa_wichuraiana	Rw5G022640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	428
AasI	GACNNNNNNGTC	2 cut(s)	110, 1787
AatII	GACGTC	1 cut(s)	1691
Acc36I	ACCTGC	2 cut(s)	382, 428
AccI	GTMKAC	4 cut(s)	802, 1869, 2285, 2426
AccII	CGCG	2 cut(s)	430, 467
AciI	CCGC	8 cut(s)	428, 465, 523, 580, 853, 856, 899, 1940
AcsI	RAATTY	8 cut(s)	782, 1057, 1490, 1759, 1904, 1994, 2219, 2708
AcuI	CTGAAG	4 cut(s)	719, 1572, 2294, 2451
AcyI	GRCGYC	1 cut(s)	1688
AfiI	CCNNNNNNNGG	5 cut(s)	522, 566, 643, 734, 1546
AflIII	ACRYGT	2 cut(s)	630, 1479
AhlI	ACTAGT	1 cut(s)	973
AjiI	CACGTC	1 cut(s)	631
AjnI	CCWGG	5 cut(s)	114, 870, 1494, 1579, 2199
AjuI	GAANNNNNNNTTGG	1 cut(s)	2732
AleI	CACNNNNGTG	1 cut(s)	737
AluBI	AGCT	3 cut(s)	395, 652, 1298
AluI	AGCT	3 cut(s)	395, 652, 1298
Alw21I	GWGCWC	2 cut(s)	927, 1479
Alw26I	GTCTC	1 cut(s)	759
AlwNI	CAGNNNCTG	2 cut(s)	395, 2600
Ama87I	CYCGRG	2 cut(s)	320, 549
ApeKI	GCWGC	8 cut(s)	395, 491, 494, 583, 2324, 2357, 2609, 2745
ApoI	RAATTY	8 cut(s)	782, 1057, 1490, 1759, 1904, 1994, 2219, 2708
Asp700I	GAANNNNTTC	1 cut(s)	2013
AspLEI	GCGC	3 cut(s)	379, 432, 469
AspS9I	GGNCC	3 cut(s)	140, 554, 606
AsuHPI	GGTGA	6 cut(s)	199, 409, 751, 947, 2305, 2717
AvaI	CYCGRG	2 cut(s)	320, 549
AxyI	CCTNAGG	3 cut(s)	575, 602, 1542
BaeI	ACNNNNGTAYC	4 cut(s)	189, 222, 686, 719
BamHI	GGATCC	1 cut(s)	2525
BbsI	GAAGAC	2 cut(s)	192, 2403
Bbv12I	GWGCWC	2 cut(s)	927, 1479
BbvI	GCAGC	8 cut(s)	382, 478, 481, 570, 2311, 2369, 2596, 2732
BccI	CCATC	5 cut(s)	512, 616, 831, 1604, 2467
BceAI	ACGGC	6 cut(s)	97, 450, 602, 1346, 2160, 2337
BciT130I	CCWGG	5 cut(s)	116, 872, 1496, 1581, 2201
BclI	TGATCA	1 cut(s)	1015
BcoDI	GTCTC	1 cut(s)	759
BcuI	ACTAGT	1 cut(s)	973
BfaI	CTAG	6 cut(s)	729, 747, 974, 1553, 1812, 2054
BfmI	CTRYAG	3 cut(s)	262, 754, 2610
BfuAI	ACCTGC	2 cut(s)	382, 428
BglI	GCCNNNNNGGC	2 cut(s)	409, 828
BglII	AGATCT	1 cut(s)	2585
Bme1390I	CCNGG	5 cut(s)	116, 872, 1496, 1581, 2201
BmeT110I	CYCGRG	2 cut(s)	320, 549
BmgBI	CACGTC	1 cut(s)	631
BmgT120I	GGNCC	3 cut(s)	140, 554, 606
BmiI	GGNNCC	1 cut(s)	2527
BmrFI	CCNGG	5 cut(s)	116, 872, 1496, 1581, 2201
BmsI	GCATC	6 cut(s)	2336, 2545, 2567, 2600, 2688, 2710
BpiI	GAAGAC	2 cut(s)	192, 2403
BpmI	CTGGAG	2 cut(s)	129, 1176
BpuEI	CTTGAG	1 cut(s)	946
BsaBI	GATNNNNATC	3 cut(s)	822, 2208, 2590
BsaHI	GRCGYC	1 cut(s)	1688
BsaJI	CCNNGG	9 cut(s)	54, 319, 550, 928, 1713, 2199, 2295, 2319, 2331
BsaWI	WCCGGW	2 cut(s)	134, 2712
BsaXI	ACNNNNNCTCC	2 cut(s)	1975, 2005
Bsc4I	CCNNNNNNNGG	5 cut(s)	522, 566, 643, 734, 1546
Bse118I	RCCGGY	2 cut(s)	408, 566
Bse1I	ACTGG	5 cut(s)	146, 1022, 1118, 1415, 2419
Bse21I	CCTNAGG	3 cut(s)	575, 602, 1542
Bse3DI	GCAATG	2 cut(s)	1003, 1825
Bse8I	GATNNNNATC	3 cut(s)	822, 2208, 2590
BseBI	CCWGG	5 cut(s)	116, 872, 1496, 1581, 2201
BseDI	CCNNGG	9 cut(s)	54, 319, 550, 928, 1713, 2199, 2295, 2319, 2331
BseGI	GGATG	9 cut(s)	103, 345, 850, 1289, 1330, 1419, 1735, 2110, 2327
BseJI	GATNNNNATC	3 cut(s)	822, 2208, 2590
BseLI	CCNNNNNNNGG	5 cut(s)	522, 566, 643, 734, 1546
BseMI	GCAATG	2 cut(s)	1003, 1825
BseMII	CTCAG	7 cut(s)	566, 602, 616, 1024, 1556, 1728, 2594
BseNI	ACTGG	5 cut(s)	146, 1022, 1118, 1415, 2419
BseXI	GCAGC	8 cut(s)	382, 478, 481, 570, 2311, 2369, 2596, 2732
BseYI	CCCAGC	2 cut(s)	385, 399
BsgI	GTGCAG	3 cut(s)	1046, 2376, 2394
Bsh1236I	CGCG	2 cut(s)	430, 467
BsiHKAI	GWGCWC	2 cut(s)	927, 1479
BsiHKCI	CYCGRG	2 cut(s)	320, 549
BsiSI	CCGG	4 cut(s)	135, 409, 567, 2713
BslFI	GGGAC	2 cut(s)	1246, 1527
BslI	CCNNNNNNNGG	5 cut(s)	522, 566, 643, 734, 1546
BsmAI	GTCTC	1 cut(s)	759
BsmFI	GGGAC	2 cut(s)	1246, 1527
BsmI	GAATGC	2 cut(s)	875, 1532
BsoBI	CYCGRG	2 cut(s)	320, 549
Bsp1286I	GDGCHC	2 cut(s)	927, 1479
Bsp1407I	TGTACA	2 cut(s)	1363, 2166
BspACI	CCGC	8 cut(s)	428, 465, 523, 580, 853, 856, 899, 1940
BspCNI	CTCAG	7 cut(s)	567, 601, 615, 1023, 1555, 1729, 2593
BspFNI	CGCG	2 cut(s)	430, 467
BspHI	TCATGA	1 cut(s)	1141
BspLI	GGNNCC	1 cut(s)	2527
BspMAI	CTGCAG	2 cut(s)	758, 2614
BspMI	ACCTGC	2 cut(s)	382, 428
BspQI	GCTCTTC	1 cut(s)	517
BsrDI	GCAATG	2 cut(s)	1003, 1825
BsrFI	RCCGGY	2 cut(s)	408, 566
BsrGI	TGTACA	2 cut(s)	1363, 2166
BsrI	ACTGG	5 cut(s)	146, 1022, 1118, 1415, 2419
BssAI	RCCGGY	2 cut(s)	408, 566
BssECI	CCNNGG	9 cut(s)	54, 319, 550, 928, 1713, 2199, 2295, 2319, 2331
BssNAI	GTATAC	1 cut(s)	803
BssNI	GRCGYC	1 cut(s)	1688
BssT1I	CCWWGG	3 cut(s)	928, 2295, 2331
Bst1107I	GTATAC	1 cut(s)	803
Bst2UI	CCWGG	5 cut(s)	116, 872, 1496, 1581, 2201
Bst4CI	ACNGT	6 cut(s)	129, 205, 1054, 1404, 1776, 2699
Bst6I	CTCTTC	3 cut(s)	329, 517, 2220
BstACI	GRCGYC	1 cut(s)	1688
BstAPI	GCANNNNNTGC	2 cut(s)	395, 2609
BstAUI	TGTACA	2 cut(s)	1363, 2166
BstC8I	GCNNGC	2 cut(s)	1115, 1195
BstDEI	CTNAG	7 cut(s)	575, 588, 602, 1010, 1542, 1737, 2580
BstDSI	CCRYGG	1 cut(s)	2319
BstEII	GGTNACC	1 cut(s)	205
BstENI	CCTNNNNNAGG	1 cut(s)	732
BstF5I	GGATG	9 cut(s)	103, 345, 850, 1289, 1330, 1419, 1735, 2110, 2327
BstFNI	CGCG	2 cut(s)	430, 467
BstHHI	GCGC	3 cut(s)	379, 432, 469
BstMAI	GTCTC	1 cut(s)	759
BstMWI	GCNNNNNNNGC	9 cut(s)	376, 395, 409, 429, 500, 614, 828, 2057, 2609
BstNI	CCWGG	5 cut(s)	116, 872, 1496, 1581, 2201
BstNSI	RCATGY	3 cut(s)	1197, 1483, 1634
BstPI	GGTNACC	1 cut(s)	205
BstSCI	CCNGG	5 cut(s)	114, 870, 1494, 1579, 2199
BstSFI	CTRYAG	3 cut(s)	262, 754, 2610
BstUI	CGCG	2 cut(s)	430, 467
BstV1I	GCAGC	8 cut(s)	382, 478, 481, 570, 2311, 2369, 2596, 2732
BstV2I	GAAGAC	2 cut(s)	192, 2403
BstX2I	RGATCY	6 cut(s)	1093, 1235, 2082, 2209, 2525, 2585
BstXI	CCANNNNNNTGG	1 cut(s)	2414
BstYI	RGATCY	6 cut(s)	1093, 1235, 2082, 2209, 2525, 2585
BstZ17I	GTATAC	1 cut(s)	803
Bsu36I	CCTNAGG	3 cut(s)	575, 602, 1542
BtgI	CCRYGG	1 cut(s)	2319
BtgZI	GCGATG	1 cut(s)	99
BtrI	CACGTC	1 cut(s)	631
BtsCI	GGATG	9 cut(s)	103, 345, 850, 1289, 1330, 1419, 1735, 2110, 2327
BtsIMutI	CAGTG	5 cut(s)	1018, 1029, 1125, 1400, 1698
BveI	ACCTGC	2 cut(s)	382, 428
Cac8I	GCNNGC	2 cut(s)	1115, 1195
CaiI	CAGNNNCTG	2 cut(s)	395, 2600
CciI	TCATGA	1 cut(s)	1141
CfoI	GCGC	3 cut(s)	379, 432, 469
Cfr10I	RCCGGY	2 cut(s)	408, 566
Cfr13I	GGNCC	3 cut(s)	140, 554, 606
CseI	GACGC	1 cut(s)	2448
CsiI	ACCWGGT	1 cut(s)	1579
DdeI	CTNAG	7 cut(s)	575, 588, 602, 1010, 1542, 1737, 2580
DrdI	GACNNNNNNGTC	2 cut(s)	110, 1787
DseDI	GACNNNNNNGTC	2 cut(s)	110, 1787
Eam1104I	CTCTTC	3 cut(s)	329, 517, 2220
EarI	CTCTTC	3 cut(s)	329, 517, 2220
Eco130I	CCWWGG	3 cut(s)	928, 2295, 2331
Eco147I	AGGCCT	1 cut(s)	1699
Eco32I	GATATC	1 cut(s)	1183
Eco57I	CTGAAG	4 cut(s)	719, 1572, 2294, 2451
Eco81I	CCTNAGG	3 cut(s)	575, 602, 1542
Eco88I	CYCGRG	2 cut(s)	320, 549
Eco91I	GGTNACC	1 cut(s)	205
EcoNI	CCTNNNNNAGG	1 cut(s)	732
EcoO109I	RGGNCCY	1 cut(s)	554
EcoO65I	GGTNACC	1 cut(s)	205
EcoRI	GAATTC	2 cut(s)	1490, 2708
EcoRII	CCWGG	5 cut(s)	114, 870, 1494, 1579, 2199
EcoRV	GATATC	1 cut(s)	1183
EcoT14I	CCWWGG	3 cut(s)	928, 2295, 2331
EcoT22I	ATGCAT	1 cut(s)	2560
ErhI	CCWWGG	3 cut(s)	928, 2295, 2331
FalI	AAGNNNNNCTT	2 cut(s)	1935, 1967
FaqI	GGGAC	2 cut(s)	1246, 1527
FauI	CCCGC	1 cut(s)	1947
FbaI	TGATCA	1 cut(s)	1015
FblI	GTMKAC	4 cut(s)	802, 1869, 2285, 2426
FokI	GGATG	9 cut(s)	110, 352, 857, 1276, 1337, 1406, 1742, 2117, 2314
FspBI	CTAG	6 cut(s)	729, 747, 974, 1553, 1812, 2054
GlaI	GCGC	3 cut(s)	378, 431, 468
GsaI	CCCAGC	2 cut(s)	389, 403
GsuI	CTGGAG	2 cut(s)	129, 1176
HapII	CCGG	4 cut(s)	135, 409, 567, 2713
HgaI	GACGC	1 cut(s)	2448
HhaI	GCGC	3 cut(s)	379, 432, 469
Hin1I	GRCGYC	1 cut(s)	1688
Hin6I	GCGC	3 cut(s)	377, 430, 467
HinP1I	GCGC	3 cut(s)	377, 430, 467
HincII	GTYRAC	3 cut(s)	969, 1537, 1828
HindII	GTYRAC	3 cut(s)	969, 1537, 1828
HpaI	GTTAAC	1 cut(s)	1828
HpaII	CCGG	4 cut(s)	135, 409, 567, 2713
HphI	GGTGA	6 cut(s)	199, 409, 751, 947, 2305, 2717
Hpy188III	TCNNGA	8 cut(s)	452, 549, 1142, 1276, 1544, 1769, 1878, 2552
Hpy99I	CGWCG	9 cut(s)	83, 110, 167, 170, 205, 491, 632, 775, 1002
HpyCH4III	ACNGT	6 cut(s)	129, 205, 1054, 1404, 1776, 2699
HpyCH4IV	ACGT	4 cut(s)	630, 997, 1688, 1920
HpyF10VI	GCNNNNNNNGC	9 cut(s)	376, 395, 409, 429, 500, 614, 828, 2057, 2609
HpyF3I	CTNAG	7 cut(s)	575, 588, 602, 1010, 1542, 1737, 2580
HpySE526I	ACGT	4 cut(s)	630, 997, 1688, 1920
Hsp92I	GRCGYC	1 cut(s)	1688
HspAI	GCGC	3 cut(s)	377, 430, 467
Ksp22I	TGATCA	1 cut(s)	1015
KspAI	GTTAAC	1 cut(s)	1828
LguI	GCTCTTC	1 cut(s)	517
LmnI	GCTCC	6 cut(s)	64, 464, 930, 1815, 1983, 2728
Lsp1109I	GCAGC	8 cut(s)	382, 478, 481, 570, 2311, 2369, 2596, 2732
LweI	GCATC	6 cut(s)	2336, 2545, 2567, 2600, 2688, 2710
MabI	ACCWGGT	1 cut(s)	1579
MaeI	CTAG	6 cut(s)	729, 747, 974, 1553, 1812, 2054
MaeII	ACGT	4 cut(s)	630, 997, 1688, 1920
MaeIII	GTNAC	2 cut(s)	205, 1482
MfeI	CAATTG	1 cut(s)	2740
MflI	RGATCY	6 cut(s)	1093, 1235, 2082, 2209, 2525, 2585
MhlI	GDGCHC	2 cut(s)	927, 1479
MlyI	GAGTC	3 cut(s)	83, 717, 761
MmeI	TCCRAC	4 cut(s)	102, 584, 1961, 2230
Mph1103I	ATGCAT	1 cut(s)	2560
MroXI	GAANNNNTTC	1 cut(s)	2013
MseI	TTAA	8 cut(s)	893, 978, 1650, 1724, 1827, 2127, 2244, 2454
MslI	CAYNNNNRTG	4 cut(s)	737, 1104, 1424, 1521
MspI	CCGG	4 cut(s)	135, 409, 567, 2713
MspR9I	CCNGG	5 cut(s)	116, 872, 1496, 1581, 2201
MunI	CAATTG	1 cut(s)	2740
Mva1269I	GAATGC	2 cut(s)	875, 1532
MvaI	CCWGG	5 cut(s)	116, 872, 1496, 1581, 2201
MvnI	CGCG	2 cut(s)	430, 467
MwoI	GCNNNNNNNGC	9 cut(s)	376, 395, 409, 429, 500, 614, 828, 2057, 2609
NlaIV	GGNNCC	1 cut(s)	2527
NmeAIII	GCCGAG	3 cut(s)	79, 231, 1169
NmuCI	GTSAC	1 cut(s)	205
NsiI	ATGCAT	1 cut(s)	2560
NspI	RCATGY	3 cut(s)	1197, 1483, 1634
OliI	CACNNNNGTG	1 cut(s)	737
PaeI	GCATGC	1 cut(s)	1197
PagI	TCATGA	1 cut(s)	1141
PaqCI	CACCTGC	1 cut(s)	428
PceI	AGGCCT	1 cut(s)	1699
PciI	ACATGT	1 cut(s)	1479
PciSI	GCTCTTC	1 cut(s)	517
PctI	GAATGC	2 cut(s)	875, 1532
PdmI	GAANNNNTTC	1 cut(s)	2013
PflFI	GACNNNGTC	2 cut(s)	110, 485
PfoI	TCCNGGA	2 cut(s)	114, 1494
PleI	GAGTC	3 cut(s)	82, 716, 761
PpsI	GAGTC	3 cut(s)	82, 716, 761
PscI	ACATGT	1 cut(s)	1479
Psp6I	CCWGG	5 cut(s)	114, 870, 1494, 1579, 2199
PspEI	GGTNACC	1 cut(s)	205
PspFI	CCCAGC	2 cut(s)	385, 399
PspGI	CCWGG	5 cut(s)	114, 870, 1494, 1579, 2199
PspN4I	GGNNCC	1 cut(s)	2527
PspPI	GGNCC	3 cut(s)	140, 554, 606
PstI	CTGCAG	2 cut(s)	758, 2614
PstNI	CAGNNNCTG	2 cut(s)	395, 2600
PsuI	RGATCY	6 cut(s)	1093, 1235, 2082, 2209, 2525, 2585
PsyI	GACNNNGTC	2 cut(s)	110, 485
RseI	CAYNNNNRTG	4 cut(s)	737, 1104, 1424, 1521
SapI	GCTCTTC	1 cut(s)	517
SaqAI	TTAA	8 cut(s)	893, 978, 1650, 1724, 1827, 2127, 2244, 2454
Sau96I	GGNCC	3 cut(s)	140, 554, 606
SchI	GAGTC	3 cut(s)	83, 717, 761
ScrFI	CCNGG	5 cut(s)	116, 872, 1496, 1581, 2201
SduI	GDGCHC	2 cut(s)	927, 1479
SexAI	ACCWGGT	1 cut(s)	1579
SfaNI	GCATC	6 cut(s)	2336, 2545, 2567, 2600, 2688, 2710
SfcI	CTRYAG	3 cut(s)	262, 754, 2610
SmiMI	CAYNNNNRTG	4 cut(s)	737, 1104, 1424, 1521
SmlI	CTYRAG	1 cut(s)	961
SmoI	CTYRAG	1 cut(s)	961
SpeI	ACTAGT	1 cut(s)	973
SphI	GCATGC	1 cut(s)	1197
SseBI	AGGCCT	1 cut(s)	1699
SsiI	CCGC	8 cut(s)	428, 465, 523, 580, 853, 856, 899, 1940
SspI	AATATT	1 cut(s)	2173
SspMI	CTAG	6 cut(s)	729, 747, 974, 1553, 1812, 2054
StuI	AGGCCT	1 cut(s)	1699
StyD4I	CCNGG	5 cut(s)	114, 870, 1494, 1579, 2199
StyI	CCWWGG	3 cut(s)	928, 2295, 2331
TaaI	ACNGT	6 cut(s)	129, 205, 1054, 1404, 1776, 2699
TaiI	ACGT	4 cut(s)	633, 1000, 1691, 1923
TaqI	TCGA	9 cut(s)	474, 480, 648, 773, 879, 1666, 1763, 1858, 2185
TaqII	GACCGA	1 cut(s)	1064
TatI	WGTACW	3 cut(s)	1363, 1707, 2166
TauI	GCSGC	3 cut(s)	583, 856, 859
Tru1I	TTAA	8 cut(s)	893, 978, 1650, 1724, 1827, 2127, 2244, 2454
Tru9I	TTAA	8 cut(s)	893, 978, 1650, 1724, 1827, 2127, 2244, 2454
TscAI	CASTG	5 cut(s)	1018, 1029, 1125, 1407, 1698
TseFI	GTSAC	1 cut(s)	205
TseI	GCWGC	8 cut(s)	395, 491, 494, 583, 2324, 2357, 2609, 2745
Tsp45I	GTSAC	1 cut(s)	205
TspGWI	ACGGA	2 cut(s)	830, 1282
TspRI	CASTG	5 cut(s)	1018, 1029, 1125, 1407, 1698
Tth111I	GACNNNGTC	2 cut(s)	110, 485
XagI	CCTNNNNNAGG	1 cut(s)	732
XapI	RAATTY	8 cut(s)	782, 1057, 1490, 1759, 1904, 1994, 2219, 2708
XceI	RCATGY	3 cut(s)	1197, 1483, 1634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1407
XmiI	GTMKAC	4 cut(s)	802, 1869, 2285, 2426
XmnI	GAANNNNTTC	1 cut(s)	2013
XspI	CTAG	6 cut(s)	729, 747, 974, 1553, 1812, 2054
ZraI	GACGTC	1 cut(s)	1689
Zsp2I	ATGCAT	1 cut(s)	2560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.