MD12G1037600.v1.1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
4038979 .. 4040818
1840 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1037600.v1.1.491

Sequence Viewer

Length: 1425 bp
ATGGCAAATCCCACCTCCCTCCTCCTCTCTCTCACCACTCTCCTCTCTCTCCTCCTCCCTTCTCTCTCATCCAAACTCACCATCCCTCTCTCCCCATTCCCCAAACCACCGTCCACCGATCTACTCCAATCCCTCAACTTCCATGCCACCGCCTCCGTCTCCCGAGCCCACCACATCAAAAACCCCAAAAAATCCTCCCACCATTCTCCCTCCACCCAAGTCCCCCTCTTCCCCCACAGCTACGGCGGCTACTCCGTCTCCCTCCGCTTCGGCACGCCGCCACAAACCTCCTCTTTCATCATGGACACCGGCAGCAGCCTCGTTTGGTTCCCCTGCACCAAACGCTACACCTGCTCCAAATGCCAGTTCCCAAACATCGACCCCTCAAAAATTCCAACTTTCATCCCCAAACTCTCCTCCTCCTCCAAAATCGTCGGCTGCAAAAACCCCAAATGCGCTTGGATTTTCGGCCCCGAAATCCAATCCAAATGCCCGAATTGCAACGACCCAACTAGCCAAAACTGCTCCCAAGCCTGCCCAACGTACATAGTCCAGTACGGTTTGGGCACAACAGCTGGGATTTTACTTTCCGAGTCACTTAATTTTCCCGAGAAAATTGTCCCTGATTTTCTCGTCGGCTGCTCCTTCCTCTCCATCCGCCAGCCAGCCGGAATCGCCGGATTCGGCCGCGGACCGCAATCCCTTCCTGCCCAAATGGGGCTTTCCAAATTCTCTTACTGCTTAGTCTCCCACAAATTCGACGACACCCCACAAAGCAGTGACCTTGTTCTGTACACTGGCAGCGGTAGCTCCGACGAACCCATTTCTTCAGCCCGAAAAAACGAAACGAAAGCTCAGAGCTCGATCTACACGCCGTTTCAGAAAAACCCAGGTTCTCCAAACTCTGCATTTCGCGAGTACTACTATATCATGCTCAGAAAAATCATCGTGGGCAAGAAGCACGTCAATATTCCGTACAAGTTTCTCGTCCCCGGAGCCGACAGCAATGGCGGGACGATCGTGGATTCCGGATCGACCTTCACGTTCATGGAGAAGCCTGTTTTCGAAGCCGTTGCGAAAGAGTTTGAGTTACAGATGGCGAATTACACGAGAGCTAAGGACTTGGAAAACAGGACGGGATTGAGTCCCTGTTTTGATATTTCAAAGGAGGAGAAATTGGAGTTTCCGGAATTGGTTTTCCAGTTCAAAGGGGGTGCTAAGATGGAGCTGCCATTGGCGAACTATTTCTCGCTGGTTTCGAGCTCCGGCGTTGTGTGTTTGACGATTGTTTCAGATGAAATTGTTGGTCCAGGGGGCAATGGTGGACCTGCGATTATTCTGGGGAACTATCAGCAGCAGAATTTCTTCGTGGAGTATGATTTGGAACGTGAGAGGTTTGGGTTCCGGAAACAGAGTTGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

475

Amino Acids

51.85

Weight (kDa)

8.85

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 84 - 253 1.5e-27 Xylanase inhibitor N-terminal
Asp PF00026 84 - 143 8.1e-06 Eukaryotic aspartyl protease
Asp PF00026 306 - 468 1.4e-07 Eukaryotic aspartyl protease
TAXi_C PF14541 308 - 469 2.3e-33 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015999)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52500
fragaria_vesca FvH4_6g20050
malus_domestica MD12G1037600.v1.1 MD14G1036600.v1.1
prunus_persica Prupe.7G097600_v2.0.a1
pyrus_communis pycom12g03260
rosa_chinensis RchiOBHm_Chr3g0475521
rosa_laevigata RLG00000023836
rosa_roxburghii Rroxscaffold_6G00406210
rosa_rugosa Rorug03G0150100
rosa_samantha Rh3AG199700 Rh3BG229700 Rh3CG224000 Rh3DG225000
rosa_wichuraiana Rw3G018100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 359
Acc36I ACCTGC 2 cut(s) 359, 1336
AccII CGCG 2 cut(s) 690, 915
AccIII TCCGGA 3 cut(s) 1028, 1186, 1404
AclWI GGATC 1 cut(s) 1039
AcoI YGGCCR 1 cut(s) 685
AcsI RAATTY 4 cut(s) 390, 728, 755, 1360
AcuI CTGAAG 1 cut(s) 813
AfaI GTAC 5 cut(s) 545, 557, 794, 920, 977
AfiI CCNNNNNNNGG 1 cut(s) 717
AgsI TTSAA 2 cut(s) 1164, 1207
AjiI CACGTC 1 cut(s) 964
AjnI CCWGG 2 cut(s) 889, 1309
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
AluBI AGCT 8 cut(s) 240, 575, 810, 854, 861, 1115, 1228, 1263
AluI AGCT 8 cut(s) 240, 575, 810, 854, 861, 1115, 1228, 1263
Alw21I GWGCWC 2 cut(s) 863, 1265
Alw26I GTCTC 3 cut(s) 163, 262, 751
AlwI GGATC 1 cut(s) 1039
Ama87I CYCGRG 2 cut(s) 162, 608
Aor13HI TCCGGA 3 cut(s) 1028, 1186, 1404
AoxI GGCC 2 cut(s) 469, 685
ApeKI GCWGC 7 cut(s) 312, 315, 438, 639, 801, 1228, 1354
ApoI RAATTY 4 cut(s) 390, 728, 755, 1360
Asp700I GAANNNNTTC 2 cut(s) 1244, 1364
AspLEI GCGC 1 cut(s) 458
AspS9I GGNCC 4 cut(s) 470, 692, 1307, 1325
AsuC2I CCSGG 1 cut(s) 993
AsuHPI GGTGA 2 cut(s) 25, 70
AsuII TTCGAA 1 cut(s) 1065
AvaI CYCGRG 2 cut(s) 162, 608
AvaII GGWCC 3 cut(s) 692, 1307, 1325
BaeGI GKGCMC 1 cut(s) 569
BanII GRGCYC 3 cut(s) 169, 863, 1265
BauI CACGAG 1 cut(s) 1108
Bbv12I GWGCWC 2 cut(s) 863, 1265
BbvI GCAGC 7 cut(s) 324, 327, 425, 626, 813, 1215, 1366
BccI CCATC 4 cut(s) 89, 662, 1090, 1216
BceAI ACGGC 3 cut(s) 259, 859, 1055
BcgI CGANNNNNNTGC 4 cut(s) 301, 335, 1055, 1089
BciT130I CCWGG 2 cut(s) 891, 1311
BcnI CCSGG 1 cut(s) 993
BcoDI GTCTC 3 cut(s) 163, 262, 751
BfaI CTAG 1 cut(s) 513
BfuAI ACCTGC 2 cut(s) 359, 1336
BmcAI AGTACT 1 cut(s) 920
Bme1390I CCNGG 3 cut(s) 891, 993, 1311
Bme18I GGWCC 3 cut(s) 692, 1307, 1325
BmeT110I CYCGRG 2 cut(s) 162, 608
BmgBI CACGTC 1 cut(s) 964
BmgT120I GGNCC 4 cut(s) 470, 692, 1307, 1325
BmiI GGNNCC 4 cut(s) 329, 472, 997, 1403
BmrFI CCNGG 3 cut(s) 891, 993, 1311
Bpu10I CCTNAGC 1 cut(s) 1116
Bpu14I TTCGAA 1 cut(s) 1065
BpuMI CCSGG 1 cut(s) 993
BsaJI CCNNGG 4 cut(s) 688, 889, 991, 1310
BsaWI WCCGGW 3 cut(s) 1028, 1186, 1404
BsaXI ACNNNNNCTCC 4 cut(s) 242, 272, 338, 368
Bsc4I CCNNNNNNNGG 1 cut(s) 717
Bse118I RCCGGY 1 cut(s) 308
Bse1I ACTGG 4 cut(s) 364, 553, 802, 1201
Bse3DI GCAATG 2 cut(s) 1012, 1324
BseAI TCCGGA 3 cut(s) 1028, 1186, 1404
BseBI CCWGG 2 cut(s) 891, 1311
BseDI CCNNGG 4 cut(s) 688, 889, 991, 1310
BseGI GGATG 4 cut(s) 68, 81, 402, 654
BseLI CCNNNNNNNGG 1 cut(s) 717
BseMI GCAATG 2 cut(s) 1012, 1324
BseMII CTCAG 2 cut(s) 869, 949
BseNI ACTGG 4 cut(s) 364, 553, 802, 1201
BseSI GKGCMC 1 cut(s) 569
BseX3I CGGCCG 1 cut(s) 685
BseXI GCAGC 7 cut(s) 324, 327, 425, 626, 813, 1215, 1366
BseYI CCCAGC 1 cut(s) 575
BsgI GTGCAG 1 cut(s) 319
Bsh1236I CGCG 2 cut(s) 690, 915
Bsh1285I CGRYCG 2 cut(s) 688, 1020
BshFI GGCC 2 cut(s) 471, 687
BsiEI CGRYCG 2 cut(s) 688, 1020
BsiHKAI GWGCWC 2 cut(s) 863, 1265
BsiHKCI CYCGRG 2 cut(s) 162, 608
BsiSI CCGG 8 cut(s) 309, 669, 678, 993, 1029, 1187, 1266, 1405
BslFI GGGAC 5 cut(s) 206, 605, 974, 1027, 1131
BslI CCNNNNNNNGG 1 cut(s) 717
BsmAI GTCTC 3 cut(s) 163, 262, 751
BsmBI CGTCTC 2 cut(s) 163, 262
BsmFI GGGAC 5 cut(s) 206, 605, 974, 1027, 1131
BsnI GGCC 2 cut(s) 471, 687
BsoBI CYCGRG 2 cut(s) 162, 608
Bsp119I TTCGAA 1 cut(s) 1065
Bsp1286I GDGCHC 4 cut(s) 169, 569, 863, 1265
Bsp13I TCCGGA 3 cut(s) 1028, 1186, 1404
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 4 cut(s) 118, 864, 1017, 1031
Bsp68I TCGCGA 1 cut(s) 915
BspANI GGCC 2 cut(s) 471, 687
BspCNI CTCAG 2 cut(s) 868, 948
BspEI TCCGGA 3 cut(s) 1028, 1186, 1404
BspFNI CGCG 2 cut(s) 690, 915
BspLI GGNNCC 4 cut(s) 329, 472, 997, 1403
BspMI ACCTGC 2 cut(s) 359, 1336
BspPI GGATC 1 cut(s) 1039
BspT104I TTCGAA 1 cut(s) 1065
BsrDI GCAATG 2 cut(s) 1012, 1324
BsrFI RCCGGY 1 cut(s) 308
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 4 cut(s) 364, 553, 802, 1201
BssAI RCCGGY 1 cut(s) 308
BssECI CCNNGG 4 cut(s) 688, 889, 991, 1310
BssMI GATC 4 cut(s) 118, 864, 1017, 1031
BssSI CACGAG 1 cut(s) 1108
Bst2BI CACGAG 1 cut(s) 1108
Bst2UI CCWGG 2 cut(s) 891, 1311
Bst4CI ACNGT 2 cut(s) 111, 560
Bst6I CTCTTC 1 cut(s) 233
BstAUI TGTACA 1 cut(s) 792
BstBI TTCGAA 1 cut(s) 1065
BstC8I GCNNGC 4 cut(s) 275, 535, 662, 666
BstDEI CTNAG 5 cut(s) 742, 855, 935, 1116, 1218
BstDSI CCRYGG 1 cut(s) 688
BstF5I GGATG 4 cut(s) 68, 81, 402, 654
BstFNI CGCG 2 cut(s) 690, 915
BstHHI GCGC 1 cut(s) 458
BstKTI GATC 4 cut(s) 121, 867, 1020, 1034
BstMAI GTCTC 3 cut(s) 163, 262, 751
BstMBI GATC 4 cut(s) 118, 864, 1017, 1031
BstMCI CGRYCG 2 cut(s) 688, 1020
BstMWI GCNNNNNNNGC 8 cut(s) 246, 342, 351, 360, 498, 522, 674, 807
BstNI CCWGG 2 cut(s) 891, 1311
BstSCI CCNGG 3 cut(s) 889, 991, 1309
BstSLI GKGCMC 1 cut(s) 569
BstUI CGCG 2 cut(s) 690, 915
BstV1I GCAGC 7 cut(s) 324, 327, 425, 626, 813, 1215, 1366
BstZI CGGCCG 1 cut(s) 685
BsuRI GGCC 2 cut(s) 471, 687
BtgI CCRYGG 1 cut(s) 688
BtrI CACGTC 1 cut(s) 964
BtsCI GGATG 4 cut(s) 68, 81, 402, 654
BtsI GCAGTG 1 cut(s) 784
BtsIMutI CAGTG 2 cut(s) 784, 795
BtuMI TCGCGA 1 cut(s) 915
BveI ACCTGC 2 cut(s) 359, 1336
Cac8I GCNNGC 4 cut(s) 275, 535, 662, 666
CfoI GCGC 1 cut(s) 458
Cfr10I RCCGGY 1 cut(s) 308
Cfr13I GGNCC 4 cut(s) 470, 692, 1307, 1325
Cfr42I CCGCGG 1 cut(s) 691
CpoI CGGWCCG 1 cut(s) 692
Csp6I GTAC 5 cut(s) 544, 556, 793, 919, 976
CspI CGGWCCG 1 cut(s) 692
CviAII CATG 4 cut(s) 143, 301, 931, 1048
CviQI GTAC 5 cut(s) 544, 556, 793, 919, 976
DdeI CTNAG 5 cut(s) 742, 855, 935, 1116, 1218
DpnI GATC 4 cut(s) 120, 866, 1019, 1033
DpnII GATC 4 cut(s) 118, 864, 1017, 1031
EaeI YGGCCR 1 cut(s) 685
EagI CGGCCG 1 cut(s) 685
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
EciI GGCGGA 1 cut(s) 647
Ecl136II GAGCTC 2 cut(s) 861, 1263
EclXI CGGCCG 1 cut(s) 685
Eco24I GRGCYC 3 cut(s) 169, 863, 1265
Eco47I GGWCC 3 cut(s) 692, 1307, 1325
Eco52I CGGCCG 1 cut(s) 685
Eco53kI GAGCTC 2 cut(s) 861, 1263
Eco57I CTGAAG 1 cut(s) 813
Eco88I CYCGRG 2 cut(s) 162, 608
EcoICRI GAGCTC 2 cut(s) 861, 1263
EcoRII CCWGG 2 cut(s) 889, 1309
EcoT38I GRGCYC 3 cut(s) 169, 863, 1265
Esp3I CGTCTC 2 cut(s) 163, 262
FaeI CATG 4 cut(s) 146, 304, 934, 1051
FaiI YATR 7 cut(s) 144, 302, 548, 927, 932, 1049, 1377
FaqI GGGAC 5 cut(s) 206, 605, 974, 1027, 1131
FatI CATG 4 cut(s) 142, 300, 930, 1047
FauI CCCGC 1 cut(s) 1004
FokI GGATG 4 cut(s) 55, 68, 389, 641
FriOI GRGCYC 3 cut(s) 169, 863, 1265
FspBI CTAG 1 cut(s) 513
GlaI GCGC 1 cut(s) 457
GsaI CCCAGC 1 cut(s) 579
HaeIII GGCC 2 cut(s) 471, 687
HapII CCGG 8 cut(s) 309, 669, 678, 993, 1029, 1187, 1266, 1405
HhaI GCGC 1 cut(s) 458
Hin1II CATG 4 cut(s) 146, 304, 934, 1051
Hin6I GCGC 1 cut(s) 456
HinP1I GCGC 1 cut(s) 456
HinfI GANTC 5 cut(s) 593, 672, 681, 1025, 1144
HpaII CCGG 8 cut(s) 309, 669, 678, 993, 1029, 1187, 1266, 1405
HphI GGTGA 2 cut(s) 25, 70
Hpy166II GTNNAC 3 cut(s) 114, 795, 1325
Hpy188I TCNGA 6 cut(s) 592, 814, 858, 882, 938, 1294
Hpy188III TCNNGA 6 cut(s) 162, 608, 914, 1029, 1187, 1405
Hpy8I GTNNAC 3 cut(s) 114, 795, 1325
Hpy99I CGWCG 4 cut(s) 437, 638, 764, 818
HpyAV CCTTC 4 cut(s) 69, 655, 713, 1048
HpyCH4III ACNGT 2 cut(s) 111, 560
HpyCH4IV ACGT 4 cut(s) 542, 963, 1043, 1387
HpyCH4V TGCA 4 cut(s) 336, 441, 501, 908
HpyF10VI GCNNNNNNNGC 8 cut(s) 246, 342, 351, 360, 498, 522, 674, 807
HpyF3I CTNAG 5 cut(s) 742, 855, 935, 1116, 1218
HpySE526I ACGT 4 cut(s) 542, 963, 1043, 1387
Hsp92II CATG 4 cut(s) 146, 304, 934, 1051
HspAI GCGC 1 cut(s) 456
Kpn2I TCCGGA 3 cut(s) 1028, 1186, 1404
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 4 cut(s) 118, 864, 1017, 1031
LmnI GCTCC 7 cut(s) 359, 530, 647, 815, 995, 1225, 1268
Lsp1109I GCAGC 7 cut(s) 324, 327, 425, 626, 813, 1215, 1366
MaeI CTAG 1 cut(s) 513
MaeII ACGT 4 cut(s) 542, 963, 1043, 1387
MaeIII GTNAC 3 cut(s) 594, 779, 1089
MalI GATC 4 cut(s) 120, 866, 1019, 1033
MboI GATC 4 cut(s) 118, 864, 1017, 1031
MboII GAAGA 3 cut(s) 220, 819, 1357
MhlI GDGCHC 4 cut(s) 169, 569, 863, 1265
MlyI GAGTC 2 cut(s) 602, 1153
MmeI TCCRAC 2 cut(s) 419, 837
MroI TCCGGA 3 cut(s) 1028, 1186, 1404
MroXI GAANNNNTTC 2 cut(s) 1244, 1364
MseI TTAA 1 cut(s) 600
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 3 cut(s) 575, 690, 804
MspI CCGG 8 cut(s) 309, 669, 678, 993, 1029, 1187, 1266, 1405
MspR9I CCNGG 3 cut(s) 891, 993, 1311
MvaI CCWGG 2 cut(s) 891, 1311
MvnI CGCG 2 cut(s) 690, 915
MwoI GCNNNNNNNGC 8 cut(s) 246, 342, 351, 360, 498, 522, 674, 807
NciI CCSGG 1 cut(s) 993
NdeII GATC 4 cut(s) 118, 864, 1017, 1031
NlaIII CATG 4 cut(s) 146, 304, 934, 1051
NlaIV GGNNCC 4 cut(s) 329, 472, 997, 1403
NmuCI GTSAC 2 cut(s) 594, 779
NruI TCGCGA 1 cut(s) 915
NspV TTCGAA 1 cut(s) 1065
PaqCI CACCTGC 1 cut(s) 359
PcsI WCGNNNNNNNCGW 2 cut(s) 1040, 1256
PdmI GAANNNNTTC 2 cut(s) 1244, 1364
PfeI GAWTC 3 cut(s) 672, 681, 1025
Ple19I CGATCG 1 cut(s) 1020
PleI GAGTC 2 cut(s) 601, 1152
PpsI GAGTC 2 cut(s) 601, 1152
Psp124BI GAGCTC 2 cut(s) 863, 1265
Psp6I CCWGG 2 cut(s) 889, 1309
PspFI CCCAGC 1 cut(s) 575
PspGI CCWGG 2 cut(s) 889, 1309
PspN4I GGNNCC 4 cut(s) 329, 472, 997, 1403
PspPI GGNCC 4 cut(s) 470, 692, 1307, 1325
PvuI CGATCG 1 cut(s) 1020
PvuII CAGCTG 1 cut(s) 575
RruI TCGCGA 1 cut(s) 915
RsaI GTAC 5 cut(s) 545, 557, 794, 920, 977
RsaNI GTAC 5 cut(s) 544, 556, 793, 919, 976
RseI CAYNNNNRTG 1 cut(s) 1046
Rsr2I CGGWCCG 1 cut(s) 692
RsrII CGGWCCG 1 cut(s) 692
SacI GAGCTC 2 cut(s) 863, 1265
SacII CCGCGG 1 cut(s) 691
SaqAI TTAA 1 cut(s) 600
Sau3AI GATC 4 cut(s) 118, 864, 1017, 1031
Sau96I GGNCC 4 cut(s) 470, 692, 1307, 1325
ScaI AGTACT 1 cut(s) 920
SchI GAGTC 2 cut(s) 602, 1153
ScrFI CCNGG 3 cut(s) 891, 993, 1311
SduI GDGCHC 4 cut(s) 169, 569, 863, 1265
Sfr303I CCGCGG 1 cut(s) 691
SfuI TTCGAA 1 cut(s) 1065
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 3 cut(s) 692, 1307, 1325
SmiMI CAYNNNNRTG 1 cut(s) 1046
SspI AATATT 1 cut(s) 970
SspMI CTAG 1 cut(s) 513
SstI GAGCTC 2 cut(s) 863, 1265
StyD4I CCNGG 3 cut(s) 889, 991, 1309
TaaI ACNGT 2 cut(s) 111, 560
TaiI ACGT 4 cut(s) 545, 966, 1046, 1390
TaqI TCGA 6 cut(s) 378, 759, 863, 1034, 1065, 1259
TatI WGTACW 2 cut(s) 792, 918
TauI GCSGC 3 cut(s) 249, 280, 690
TfiI GAWTC 3 cut(s) 672, 681, 1025
Tru1I TTAA 1 cut(s) 600
Tru9I TTAA 1 cut(s) 600
TscAI CASTG 2 cut(s) 784, 802
TseFI GTSAC 2 cut(s) 594, 779
TseI GCWGC 7 cut(s) 312, 315, 438, 639, 801, 1228, 1354
Tsp45I GTSAC 2 cut(s) 594, 779
TspDTI ATGAA 4 cut(s) 286, 391, 1036, 1311
TspGWI ACGGA 3 cut(s) 145, 244, 963
TspRI CASTG 2 cut(s) 784, 802
VpaK11BI GGWCC 3 cut(s) 692, 1307, 1325
XapI RAATTY 4 cut(s) 390, 728, 755, 1360
XmnI GAANNNNTTC 2 cut(s) 1244, 1364
XspI CTAG 1 cut(s) 513
ZrmI AGTACT 1 cut(s) 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.