MD14G1036600.v1.1

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0015999
Physical Location & Seq
Forward (+)
3339246 .. 3340673
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1036600.v1.1.491

Sequence Viewer

Length: 1428 bp
ATGGCAAATCTCACCTCCCTCCTCCTCTCTCTCACCACTCTCCTCTCTCTCCTCCTCCCTTCTCTCTCATCTAAACTCACCATCCCTCTCTTCCCATTCCCGAAACCACCGTCCACCGATCTACTCCAATCCCTCAACTTCCATGCCGCCGCCTCCCTCTCCCGAGCCCACCACATCAAAAACCCTGAAAAATCCCCCCATCCTTCTCCCTCCACCCAAGTCCCCCTCTTCCCCCACAGCTACGGCGGATACTCCGTCTCCCTCCGCTTCGGTACGCCGCCGCAAACCACCTCCTTCATCATGGACACCGGCAGCAGTCTTGTCTGGTTCCCCTGTACCAAACGCTACACTTGCTCCCAATGCCAGTTCCCAAACATCGACCCCACAAAAATCCCAACTTTCATCCCCAAATTCTCCTCCTCCTCCAAAATCGTCGGCTGCAAAAACCCCAAATGCGCTTGGATTTTCGGCCCCGAAGTCGAATCCCAATGCCCGAATTGCAACGACCCAACTCGCCAAAACTGCTCCCAAGCCTGCCCACCGTACAGACTCCAGTACGGTTCGGGCATAACAGCTGGGATTTTACTTTCCGAGTCCCTGAATTTTCCCGAGAAAATTATCCCTGATTTTCTCGTCGGTTGCTCGTTCTTCTCCATCCGGCAGCCAGCCGGAATCGCCGGATTCGGCCGCGGAACGGAATCGCTGCCGACCCAAATGGGGCTCTCCAAATTCTCTTACTGCTTAGTCTCCCATAAATTCGATGATACCCCACAAAGCAGCGAGCTTGTTCTGTACAGCGGCGGCAGCAGCGCCGACGAACCCACCGTTTCTTCGACCCGAAGAAACGACACGAAAGCTCAGCGCTCGAGCTACACGCCGTTTCAGAAAAACCCAAGTCCTCCAAACTCTGCATTTCGCGAGTACTACTACATACTGCTCAGAAAAATCATCGTGGGCAAGAAACACGTGAAGATTCCTTACAAGTTTCTCGTCCCCGGAGCCGACAGCAATGGCGGGACGATCGTGGATTCCGGATCGACCTTCACGTTCATGGAGAAGCCGGTTTTCGAAGCCGTGGCGCAAGAGTTTGAGTCACAGATGGCGAATTACACGAGAGCAAAGGACTTGGAAACCAAAACGGGATTGAGACCCTGTTTCGATATTTCAAAAGAGGAGAAGTTGGAGTTTCCGGAATTGGTTTTCCAGTTCAAAGGGGGTGCTAAGATGGAGCTGCCATTGACGAATTACTTTTCGCTGGTTTCGAGCTCGGGGGTTGTGTGCTTGACGATTGTTACTGATGGGGTTATTGGTTCAAAGAGTAGTGGTGGACCTGCCATTATTTTGGGGAATTACCAGCAGCAGAATTTTTTTGTGGAGTACGATTTGGAGGGTGACAGGTTTGGGTTCCGGAAACAGAACTGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

476

Amino Acids

52.27

Weight (kDa)

8.79

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 84 - 253 2e-27 Xylanase inhibitor N-terminal
Asp PF00026 84 - 143 8.3e-06 Eukaryotic aspartyl protease
TAXi_C PF14541 309 - 470 1.3e-33 Xylanase inhibitor C-terminal
Asp PF00026 311 - 469 1.2e-08 Eukaryotic aspartyl protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015999)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52500
fragaria_vesca FvH4_6g20050
malus_domestica MD12G1037600.v1.1 MD14G1036600.v1.1
prunus_persica Prupe.7G097600_v2.0.a1
pyrus_communis pycom12g03260
rosa_chinensis RchiOBHm_Chr3g0475521
rosa_laevigata RLG00000023836
rosa_roxburghii Rroxscaffold_6G00406210
rosa_rugosa Rorug03G0150100
rosa_samantha Rh3AG199700 Rh3BG229700 Rh3CG224000 Rh3DG225000
rosa_wichuraiana Rw3G018100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1339
AccII CGCG 2 cut(s) 690, 918
AccIII TCCGGA 3 cut(s) 1031, 1189, 1407
AclWI GGATC 1 cut(s) 1042
AcoI YGGCCR 1 cut(s) 685
AcsI RAATTY 5 cut(s) 410, 601, 728, 755, 1363
AcvI CACGTG 1 cut(s) 967
AfaI GTAC 7 cut(s) 274, 337, 545, 557, 794, 923, 1379
AfeI AGCGCT 1 cut(s) 863
AfiI CCNNNNNNNGG 2 cut(s) 694, 717
AflIII ACRYGT 1 cut(s) 964
AgsI TTSAA 3 cut(s) 1167, 1210, 1314
AluBI AGCT 7 cut(s) 240, 575, 784, 857, 870, 1231, 1266
AluI AGCT 7 cut(s) 240, 575, 784, 857, 870, 1231, 1266
Alw21I GWGCWC 1 cut(s) 1268
Alw26I GTCTC 3 cut(s) 262, 751, 1141
AlwI GGATC 1 cut(s) 1042
Ama87I CYCGRG 4 cut(s) 162, 608, 865, 1267
Aor13HI TCCGGA 3 cut(s) 1031, 1189, 1407
Aor51HI AGCGCT 1 cut(s) 863
AoxI GGCC 2 cut(s) 469, 685
ApeKI GCWGC 9 cut(s) 312, 438, 661, 703, 777, 804, 807, 1231, 1357
ApoI RAATTY 5 cut(s) 410, 601, 728, 755, 1363
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
AspLEI GCGC 4 cut(s) 458, 812, 864, 1081
AspS9I GGNCC 2 cut(s) 470, 1328
AsuC2I CCSGG 1 cut(s) 996
AsuHPI GGTGA 4 cut(s) 4, 25, 70, 1403
AsuII TTCGAA 1 cut(s) 1068
AvaI CYCGRG 4 cut(s) 162, 608, 865, 1267
AvaII GGWCC 1 cut(s) 1328
BanII GRGCYC 3 cut(s) 169, 723, 1268
BarI GAAGNNNNNNTAC 2 cut(s) 962, 994
BauI CACGAG 1 cut(s) 1111
BbrPI CACGTG 1 cut(s) 967
Bbv12I GWGCWC 1 cut(s) 1268
BbvI GCAGC 9 cut(s) 324, 425, 673, 690, 789, 816, 819, 1218, 1369
BccI CCATC 6 cut(s) 89, 207, 662, 1093, 1219, 1292
BceAI ACGGC 3 cut(s) 259, 862, 1058
BciVI GTATCC 1 cut(s) 242
BcnI CCSGG 1 cut(s) 996
BcoDI GTCTC 3 cut(s) 262, 751, 1141
BfoI RGCGCY 2 cut(s) 813, 865
BfuAI ACCTGC 1 cut(s) 1339
BfuI GTATCC 1 cut(s) 242
BlpI GCTNAGC 1 cut(s) 858
BmcAI AGTACT 1 cut(s) 923
Bme1390I CCNGG 1 cut(s) 996
Bme18I GGWCC 1 cut(s) 1328
BmeT110I CYCGRG 4 cut(s) 162, 608, 865, 1267
BmgT120I GGNCC 2 cut(s) 470, 1328
BmiI GGNNCC 4 cut(s) 329, 472, 1000, 1406
BmrFI CCNGG 1 cut(s) 996
BpmI CTGGAG 1 cut(s) 536
Bpu1102I GCTNAGC 1 cut(s) 858
Bpu14I TTCGAA 1 cut(s) 1068
BpuMI CCSGG 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 967
BsaI GGTCTC 1 cut(s) 1141
BsaJI CCNNGG 3 cut(s) 688, 994, 1074
BsaWI WCCGGW 3 cut(s) 1031, 1189, 1407
BsaXI ACNNNNNCTCC 4 cut(s) 242, 272, 338, 368
Bsc4I CCNNNNNNNGG 2 cut(s) 694, 717
Bse118I RCCGGY 2 cut(s) 308, 1060
Bse1I ACTGG 3 cut(s) 364, 553, 1204
Bse3DI GCAATG 1 cut(s) 1015
BseAI TCCGGA 3 cut(s) 1031, 1189, 1407
BseDI CCNNGG 3 cut(s) 688, 994, 1074
BseGI GGATG 4 cut(s) 81, 199, 402, 654
BseLI CCNNNNNNNGG 2 cut(s) 694, 717
BseMI GCAATG 1 cut(s) 1015
BseMII CTCAG 2 cut(s) 872, 952
BseNI ACTGG 3 cut(s) 364, 553, 1204
BseRI GAGGAG 9 cut(s) 11, 14, 32, 41, 44, 406, 409, 412, 1187
BseX3I CGGCCG 1 cut(s) 685
BseXI GCAGC 9 cut(s) 324, 425, 673, 690, 789, 816, 819, 1218, 1369
BseYI CCCAGC 1 cut(s) 575
Bsh1236I CGCG 2 cut(s) 690, 918
Bsh1285I CGRYCG 2 cut(s) 688, 1023
BshFI GGCC 2 cut(s) 471, 687
BsiEI CGRYCG 2 cut(s) 688, 1023
BsiHKAI GWGCWC 1 cut(s) 1268
BsiHKCI CYCGRG 4 cut(s) 162, 608, 865, 1267
BsiSI CCGG 9 cut(s) 309, 658, 669, 678, 996, 1032, 1061, 1190, 1408
BslFI GGGAC 4 cut(s) 206, 580, 977, 1030
BslI CCNNNNNNNGG 2 cut(s) 694, 717
BsmAI GTCTC 3 cut(s) 262, 751, 1141
BsmBI CGTCTC 1 cut(s) 262
BsmFI GGGAC 4 cut(s) 206, 580, 977, 1030
BsnI GGCC 2 cut(s) 471, 687
Bso31I GGTCTC 1 cut(s) 1141
BsoBI CYCGRG 4 cut(s) 162, 608, 865, 1267
Bsp119I TTCGAA 1 cut(s) 1068
Bsp1286I GDGCHC 3 cut(s) 169, 723, 1268
Bsp13I TCCGGA 3 cut(s) 1031, 1189, 1407
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 3 cut(s) 118, 1020, 1034
Bsp1720I GCTNAGC 1 cut(s) 858
Bsp68I TCGCGA 1 cut(s) 918
BspANI GGCC 2 cut(s) 471, 687
BspCNI CTCAG 2 cut(s) 871, 951
BspEI TCCGGA 3 cut(s) 1031, 1189, 1407
BspFNI CGCG 2 cut(s) 690, 918
BspLI GGNNCC 4 cut(s) 329, 472, 1000, 1406
BspMI ACCTGC 1 cut(s) 1339
BspPI GGATC 1 cut(s) 1042
BspT104I TTCGAA 1 cut(s) 1068
BspTNI GGTCTC 1 cut(s) 1141
BsrDI GCAATG 1 cut(s) 1015
BsrFI RCCGGY 2 cut(s) 308, 1060
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 3 cut(s) 364, 553, 1204
BssAI RCCGGY 2 cut(s) 308, 1060
BssECI CCNNGG 3 cut(s) 688, 994, 1074
BssMI GATC 3 cut(s) 118, 1020, 1034
BssSI CACGAG 1 cut(s) 1111
Bst2BI CACGAG 1 cut(s) 1111
Bst4CI ACNGT 5 cut(s) 111, 543, 560, 826, 1421
Bst6I CTCTTC 2 cut(s) 95, 233
BstAUI TGTACA 1 cut(s) 792
BstBAI YACGTR 1 cut(s) 967
BstBI TTCGAA 1 cut(s) 1068
BstC8I GCNNGC 3 cut(s) 535, 666, 782
BstDEI CTNAG 4 cut(s) 742, 858, 938, 1221
BstDSI CCRYGG 2 cut(s) 688, 1074
BstF5I GGATG 4 cut(s) 81, 199, 402, 654
BstFNI CGCG 2 cut(s) 690, 918
BstH2I RGCGCY 2 cut(s) 813, 865
BstHHI GCGC 4 cut(s) 458, 812, 864, 1081
BstKTI GATC 3 cut(s) 121, 1023, 1037
BstMAI GTCTC 3 cut(s) 262, 751, 1141
BstMBI GATC 3 cut(s) 118, 1020, 1034
BstMCI CGRYCG 2 cut(s) 688, 1023
BstMWI GCNNNNNNNGC 7 cut(s) 351, 360, 498, 522, 674, 804, 807
BstSCI CCNGG 1 cut(s) 994
BstUI CGCG 2 cut(s) 690, 918
BstV1I GCAGC 9 cut(s) 324, 425, 673, 690, 789, 816, 819, 1218, 1369
BstXI CCANNNNNNTGG 1 cut(s) 1342
BstZI CGGCCG 1 cut(s) 685
BsuI GTATCC 1 cut(s) 242
BsuRI GGCC 2 cut(s) 471, 687
BtgI CCRYGG 2 cut(s) 688, 1074
BtsCI GGATG 4 cut(s) 81, 199, 402, 654
BtuMI TCGCGA 1 cut(s) 918
BveI ACCTGC 1 cut(s) 1339
Cac8I GCNNGC 3 cut(s) 535, 666, 782
CfoI GCGC 4 cut(s) 458, 812, 864, 1081
Cfr10I RCCGGY 2 cut(s) 308, 1060
Cfr13I GGNCC 2 cut(s) 470, 1328
Cfr42I CCGCGG 1 cut(s) 691
Csp6I GTAC 7 cut(s) 273, 336, 544, 556, 793, 922, 1378
CviAII CATG 3 cut(s) 143, 301, 1051
CviQI GTAC 7 cut(s) 273, 336, 544, 556, 793, 922, 1378
DdeI CTNAG 4 cut(s) 742, 858, 938, 1221
DpnI GATC 3 cut(s) 120, 1022, 1036
DpnII GATC 3 cut(s) 118, 1020, 1034
EaeI YGGCCR 1 cut(s) 685
EagI CGGCCG 1 cut(s) 685
Eam1104I CTCTTC 2 cut(s) 95, 233
EarI CTCTTC 2 cut(s) 95, 233
EciI GGCGGA 1 cut(s) 261
Ecl136II GAGCTC 1 cut(s) 1266
EclXI CGGCCG 1 cut(s) 685
Eco24I GRGCYC 3 cut(s) 169, 723, 1268
Eco31I GGTCTC 1 cut(s) 1141
Eco47I GGWCC 1 cut(s) 1328
Eco47III AGCGCT 1 cut(s) 863
Eco52I CGGCCG 1 cut(s) 685
Eco53kI GAGCTC 1 cut(s) 1266
Eco72I CACGTG 1 cut(s) 967
Eco88I CYCGRG 4 cut(s) 162, 608, 865, 1267
EcoICRI GAGCTC 1 cut(s) 1266
EcoT38I GRGCYC 3 cut(s) 169, 723, 1268
Esp3I CGTCTC 1 cut(s) 262
FaeI CATG 3 cut(s) 146, 304, 1054
FaiI YATR 6 cut(s) 144, 302, 569, 753, 932, 1052
FaqI GGGAC 4 cut(s) 206, 580, 977, 1030
FatI CATG 3 cut(s) 142, 300, 1050
FauI CCCGC 1 cut(s) 1007
FokI GGATG 4 cut(s) 68, 186, 389, 641
FriOI GRGCYC 3 cut(s) 169, 723, 1268
GlaI GCGC 4 cut(s) 457, 811, 863, 1080
GsaI CCCAGC 1 cut(s) 579
GsuI CTGGAG 1 cut(s) 536
HaeII RGCGCY 2 cut(s) 813, 865
HaeIII GGCC 2 cut(s) 471, 687
HapII CCGG 9 cut(s) 309, 658, 669, 678, 996, 1032, 1061, 1190, 1408
HhaI GCGC 4 cut(s) 458, 812, 864, 1081
Hin1II CATG 3 cut(s) 146, 304, 1054
Hin6I GCGC 4 cut(s) 456, 810, 862, 1079
HinP1I GCGC 4 cut(s) 456, 810, 862, 1079
HinfI GANTC 9 cut(s) 482, 549, 593, 672, 681, 698, 973, 1028, 1091
HpaII CCGG 9 cut(s) 309, 658, 669, 678, 996, 1032, 1061, 1190, 1408
HphI GGTGA 4 cut(s) 4, 25, 70, 1403
Hpy166II GTNNAC 2 cut(s) 114, 1328
Hpy188I TCNGA 3 cut(s) 592, 885, 941
Hpy188III TCNNGA 7 cut(s) 100, 162, 608, 917, 1032, 1190, 1408
Hpy8I GTNNAC 2 cut(s) 114, 1328
Hpy99I CGWCG 3 cut(s) 437, 638, 818
HpyAV CCTTC 4 cut(s) 69, 213, 304, 1051
HpyCH4III ACNGT 5 cut(s) 111, 543, 560, 826, 1421
HpyCH4IV ACGT 2 cut(s) 966, 1046
HpyCH4V TGCA 3 cut(s) 441, 501, 911
HpyF10VI GCNNNNNNNGC 7 cut(s) 351, 360, 498, 522, 674, 804, 807
HpyF3I CTNAG 4 cut(s) 742, 858, 938, 1221
HpySE526I ACGT 2 cut(s) 966, 1046
Hsp92II CATG 3 cut(s) 146, 304, 1054
HspAI GCGC 4 cut(s) 456, 810, 862, 1079
Kpn2I TCCGGA 3 cut(s) 1031, 1189, 1407
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 3 cut(s) 118, 1020, 1034
LmnI GCTCC 4 cut(s) 359, 530, 998, 1228
Lsp1109I GCAGC 9 cut(s) 324, 425, 673, 690, 789, 816, 819, 1218, 1369
MaeII ACGT 2 cut(s) 966, 1046
MaeIII GTNAC 3 cut(s) 1092, 1291, 1391
MalI GATC 3 cut(s) 120, 1022, 1036
MboI GATC 3 cut(s) 118, 1020, 1034
MboII GAAGA 6 cut(s) 82, 220, 640, 822, 852, 982
MhlI GDGCHC 3 cut(s) 169, 723, 1268
MlyI GAGTC 3 cut(s) 543, 602, 1100
MmeI TCCRAC 1 cut(s) 1161
MroI TCCGGA 3 cut(s) 1031, 1189, 1407
MslI CAYNNNNRTG 1 cut(s) 1049
MspA1I CMGCKG 3 cut(s) 575, 690, 798
MspI CCGG 9 cut(s) 309, 658, 669, 678, 996, 1032, 1061, 1190, 1408
MspR9I CCNGG 1 cut(s) 996
MvnI CGCG 2 cut(s) 690, 918
MwoI GCNNNNNNNGC 7 cut(s) 351, 360, 498, 522, 674, 804, 807
NciI CCSGG 1 cut(s) 996
NdeII GATC 3 cut(s) 118, 1020, 1034
NlaIII CATG 3 cut(s) 146, 304, 1054
NlaIV GGNNCC 4 cut(s) 329, 472, 1000, 1406
NmuCI GTSAC 2 cut(s) 1092, 1391
NruI TCGCGA 1 cut(s) 918
NspV TTCGAA 1 cut(s) 1068
PaeR7I CTCGAG 1 cut(s) 865
PcsI WCGNNNNNNNCGW 3 cut(s) 822, 1043, 1259
PfeI GAWTC 6 cut(s) 482, 672, 681, 698, 973, 1028
Ple19I CGATCG 1 cut(s) 1023
PleI GAGTC 3 cut(s) 543, 601, 1099
PmaCI CACGTG 1 cut(s) 967
PmlI CACGTG 1 cut(s) 967
PpsI GAGTC 3 cut(s) 543, 601, 1099
Ppu21I YACGTR 1 cut(s) 967
Psp124BI GAGCTC 1 cut(s) 1268
PspCI CACGTG 1 cut(s) 967
PspFI CCCAGC 1 cut(s) 575
PspN4I GGNNCC 4 cut(s) 329, 472, 1000, 1406
PspPI GGNCC 2 cut(s) 470, 1328
PspXI VCTCGAGB 1 cut(s) 865
PvuI CGATCG 1 cut(s) 1023
PvuII CAGCTG 1 cut(s) 575
RruI TCGCGA 1 cut(s) 918
RsaI GTAC 7 cut(s) 274, 337, 545, 557, 794, 923, 1379
RsaNI GTAC 7 cut(s) 273, 336, 544, 556, 793, 922, 1378
RseI CAYNNNNRTG 1 cut(s) 1049
SacI GAGCTC 1 cut(s) 1268
SacII CCGCGG 1 cut(s) 691
Sau3AI GATC 3 cut(s) 118, 1020, 1034
Sau96I GGNCC 2 cut(s) 470, 1328
ScaI AGTACT 1 cut(s) 923
SchI GAGTC 3 cut(s) 543, 602, 1100
ScrFI CCNGG 1 cut(s) 996
SduI GDGCHC 3 cut(s) 169, 723, 1268
Sfr274I CTCGAG 1 cut(s) 865
Sfr303I CCGCGG 1 cut(s) 691
SfuI TTCGAA 1 cut(s) 1068
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 1 cut(s) 1328
SlaI CTCGAG 1 cut(s) 865
SmiMI CAYNNNNRTG 1 cut(s) 1049
SmlI CTYRAG 1 cut(s) 865
SmoI CTYRAG 1 cut(s) 865
SstI GAGCTC 1 cut(s) 1268
StyD4I CCNGG 1 cut(s) 994
TaaI ACNGT 5 cut(s) 111, 543, 560, 826, 1421
TaiI ACGT 2 cut(s) 969, 1049
TaqI TCGA 9 cut(s) 378, 480, 759, 833, 866, 1037, 1068, 1158, 1262
TatI WGTACW 2 cut(s) 792, 921
TauI GCSGC 7 cut(s) 149, 152, 280, 283, 690, 801, 804
TfiI GAWTC 6 cut(s) 482, 672, 681, 698, 973, 1028
TseFI GTSAC 2 cut(s) 1092, 1391
TseI GCWGC 9 cut(s) 312, 438, 661, 703, 777, 804, 807, 1231, 1357
Tsp45I GTSAC 2 cut(s) 1092, 1391
TspDTI ATGAA 3 cut(s) 286, 391, 1039
TspGWI ACGGA 2 cut(s) 244, 710
VpaK11BI GGWCC 1 cut(s) 1328
XapI RAATTY 5 cut(s) 410, 601, 728, 755, 1363
XhoI CTCGAG 1 cut(s) 865
ZrmI AGTACT 1 cut(s) 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.