MD13G1013100.v1.1

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0009753
Physical Location & Seq
Reverse (-)
811483 .. 817830
6348 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1013100.v1.1.491

Sequence Viewer

Length: 1803 bp
ATGGCTGCGTCTTCTTCATCGGGCGCACCGCTTTTCGGAATTAGAGAAGAAGATCAAAACCAGAAGATGAGGCAACAACATTCCTCCACAACACCAACGTCATCCACAGCTGCACCAGCTGCTCCACCTCAGAAGAAAAGGAGAAACCAACCTGGAACACCAAATCCAGAAGCAGAAGTGGTAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTTCACAGAAGAGGACACAACCTGCCTTGGAAGCTCAAGCAGAAGACTACAAAAGAACCCAAACGCAAAGTCTATCTCTGCCCGGAGCCCACATGCGTTCACCACGACCCCTCTCGGGCACTCGGCGACCTCACCGGCATCAAAAAGCACTACTTTAGAAAACACGGCGAGAAAAAATGGAAGTGCGAGAAGTGCTCGAAGAGGTACGCCGTCCAGTCCGATTGGAAGGCACATTCTAAGACTTGTGGCACTCGGGAATACAGATGTGACTGTGGCACTCTCTTCTCAAGGCGCGACAGTTTTATCACGCATAGGGCATTCTGCGATGCCCTCGCTCAGGAAAGTGCAAGGCATCCACCCAGTTTGACCACCATTGGCAGCAGCTTATACGGAGGAGGAAGCCTCAGCAACACTGGCCTCGGCTTATCCCATCAAGTTGTGGGCCCTCCCCATCAACTGTCCTCACTCGACCACAGCAATCAACCTAGTGACATCCTAAGGCTTGGAGGATCTTCAGGTGCTGCTGCTGCCGATCGGGCCGGACAATTCGATCACCTCCTCTCATCCCCTTCAATGGGATCATCTTTCCGACCGGCTCAGTCGTCAGCAGCATCTTTCTTCATGACTGGAGCCTCTGATCATGACCAGTCCAACCAACAACAATACCATGACCAGGACAAGTCATTTCATGGACTCATGCAGTTTACACACCACTCGCCACATCAGCATCACTCCGGAGCCGGAACCAATCTTTTTAACGTACCTTTCGTTTCCAACAGTACTAATAGCAACAGTGCCAGCAACAGCAATTCACTAATTAGTCCCAACCATTTCAACACCAATGCAAACGGCAGCGCCACCGGAGGTGGCAATGAAGTCTCGAATAATCTCTTTGCCGGACACATAATGGGTGGCGGCGATCACATGAGCTCTGGAGTCCCTTCTCTCTATAGCAACAATGGCAATAGTCAGCAGCAGGCTATATCATCGCACATGTCCGCAACCGCGCTGCTTCAGAAGGCTGCTCAAATGGGATCCAACACTTCAAACAACAACACCACCTCGCTTCTCCGTAGCTTTGGAAGCTCCTCCTCGACCACTACAAAACCTGATAGGCCCGGGACCCTAGTTCCTTCCAGCTTAGGTAGGATGTTCGGAAGTGACCAAACCGACCAGAGCCACCTCCAAGACCTAATGAACTCGTTTGCTAGCGGAGGGGGAGGCTCATCGATTTTCGGAAACGCGGCGTTTGGTAGATATGATGCATCGGCAAATAGGGCAATTAACATGGAGGATGCAAAGTTGCAGCAGCATATAGGGTTGAACAATATTGGAGGAGGTTCGGATAGGTTAACGAGGGACTTTCTTGGGGTTGGACAAGTAGTGAGGAGCATGAGCGGTGGATTTTCTCATCAGAGATCAGAGCAGCAGCATGGTGGCATGGAGATGCTGAGCTCATTGGATTCAGAGAGCAATGCTGCAGCAGCTGCGCCGTCAACCCAATCTTTTGGAGGAGGCGGGAATTTTCAGTGA

Protein Analysis

601

Amino Acids

64.12

Weight (kDa)

9.29

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 111 - 145 8e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 149 - 173 6.2e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 176 - 213 4e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 300
AccBSI CCGCTC 1 cut(s) 1668
AccII CGCG 3 cut(s) 564, 1277, 1514
AccIII TCCGGA 1 cut(s) 1004
AciI CCGC 8 cut(s) 29, 1185, 1269, 1275, 1482, 1514, 1668, 1788
AclWI GGATC 4 cut(s) 787, 856, 1299, 1312
AcsI RAATTY 1 cut(s) 1792
AcuI CTGAAG 2 cut(s) 768, 1268
AfaI GTAC 3 cut(s) 476, 1032, 1051
AfiI CCNNNNNNNGG 6 cut(s) 35, 385, 607, 844, 845, 943
AflIII ACRYGT 1 cut(s) 1263
AgsI TTSAA 4 cut(s) 843, 1105, 1317, 1594
AjnI CCWGG 2 cut(s) 151, 942
AloI GAACNNNNNNTCC 2 cut(s) 148, 180
Alw21I GWGCWC 3 cut(s) 467, 1202, 1727
Alw26I GTCTC 1 cut(s) 1153
AlwI GGATC 4 cut(s) 787, 856, 1299, 1312
AlwNI CAGNNNCTG 2 cut(s) 791, 1757
Ama87I CYCGRG 3 cut(s) 384, 522, 1388
Aor13HI TCCGGA 1 cut(s) 1004
AoxI GGCC 4 cut(s) 685, 712, 807, 1385
ApaI GGGCCC 1 cut(s) 716
ApoI RAATTY 1 cut(s) 1792
ArsI GACNNNNNNTTYG 2 cut(s) 324, 356
AspLEI GCGC 5 cut(s) 26, 564, 1127, 1279, 1762
AspS9I GGNCC 5 cut(s) 712, 713, 807, 1386, 1392
AsuC2I CCSGG 3 cut(s) 353, 1389, 1390
AsuHPI GGTGA 3 cut(s) 362, 394, 815
AsuNHI GCTAGC 1 cut(s) 1478
AvaI CYCGRG 3 cut(s) 384, 522, 1388
AvaII GGWCC 1 cut(s) 1392
AxyI CCTNAGG 1 cut(s) 767
BaeGI GKGCMC 2 cut(s) 391, 716
BamHI GGATCC 1 cut(s) 1304
BanII GRGCYC 4 cut(s) 360, 716, 1202, 1727
BbsI GAAGAC 2 cut(s) 3, 320
Bbv12I GWGCWC 3 cut(s) 467, 1202, 1727
BbvCI CCTCAGC 1 cut(s) 674
BccI CCATC 2 cut(s) 708, 729
BceAI ACGGC 4 cut(s) 451, 464, 1135, 1747
BciT130I CCWGG 2 cut(s) 153, 944
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 3 cut(s) 353, 1389, 1390
BcoDI GTCTC 1 cut(s) 1153
BfaI CTAG 3 cut(s) 756, 1397, 1479
BfmI CTRYAG 3 cut(s) 266, 1219, 1749
BfoI RGCGCY 1 cut(s) 1128
BfuAI ACCTGC 1 cut(s) 300
BglI GCCNNNNNGGC 1 cut(s) 806
BlpI GCTNAGC 1 cut(s) 1721
BmcAI AGTACT 1 cut(s) 1051
Bme1390I CCNGG 5 cut(s) 153, 353, 944, 1389, 1390
Bme18I GGWCC 1 cut(s) 1392
BmeT110I CYCGRG 3 cut(s) 384, 522, 1388
BmgT120I GGNCC 5 cut(s) 712, 713, 807, 1386, 1392
BmiI GGNNCC 9 cut(s) 248, 357, 714, 901, 1009, 1015, 1306, 1393, 1394
BmrFI CCNGG 5 cut(s) 153, 353, 944, 1389, 1390
BmrI ACTGGG 1 cut(s) 624
BmsI GCATC 9 cut(s) 417, 586, 631, 890, 1006, 1522, 1544, 1555, 1707
BmtI GCTAGC 1 cut(s) 1482
BmuI ACTGGG 1 cut(s) 624
BpiI GAAGAC 2 cut(s) 3, 320
BplI GAGNNNNNCTC 4 cut(s) 449, 481, 657, 689
BpmI CTGGAG 2 cut(s) 918, 1224
Bpu10I CCTNAGC 3 cut(s) 606, 674, 1411
Bpu1102I GCTNAGC 1 cut(s) 1721
BpuEI CTTGAG 2 cut(s) 290, 541
BpuMI CCSGG 3 cut(s) 353, 1389, 1390
Bsa29I ATCGAT 1 cut(s) 1499
BsaJI CCNNGG 3 cut(s) 296, 688, 1388
BsaWI WCCGGW 2 cut(s) 1004, 1130
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 385, 607, 844, 845, 943
Bse118I RCCGGY 2 cut(s) 404, 862
Bse1I ACTGG 5 cut(s) 484, 630, 688, 901, 916
Bse21I CCTNAGG 1 cut(s) 767
Bse3DI GCAATG 2 cut(s) 1147, 1750
BseAI TCCGGA 1 cut(s) 1004
BseBI CCWGG 2 cut(s) 153, 944
BseCI ATCGAT 1 cut(s) 1499
BseDI CCNNGG 3 cut(s) 296, 688, 1388
BseGI GGATG 6 cut(s) 101, 622, 762, 833, 1425, 1570
BseLI CCNNNNNNNGG 6 cut(s) 35, 385, 607, 844, 845, 943
BseMI GCAATG 2 cut(s) 1147, 1750
BseMII CTCAG 5 cut(s) 143, 620, 688, 881, 1712
BseNI ACTGG 5 cut(s) 484, 630, 688, 901, 916
BseRI GAGGAG 7 cut(s) 678, 818, 1348, 1351, 1620, 1672, 1797
BseSI GKGCMC 2 cut(s) 391, 716
BsgI GTGCAG 1 cut(s) 96
Bsh1236I CGCG 3 cut(s) 564, 1277, 1514
Bsh1285I CGRYCG 2 cut(s) 805, 863
BshFI GGCC 4 cut(s) 687, 714, 809, 1387
BshVI ATCGAT 1 cut(s) 1499
BsiEI CGRYCG 2 cut(s) 805, 863
BsiHKAI GWGCWC 3 cut(s) 467, 1202, 1727
BsiHKCI CYCGRG 3 cut(s) 384, 522, 1388
BsiSI CCGG 9 cut(s) 353, 405, 810, 863, 1005, 1011, 1131, 1167, 1389
BslFI GGGAC 4 cut(s) 1077, 1193, 1405, 1643
BslI CCNNNNNNNGG 6 cut(s) 35, 385, 607, 844, 845, 943
BsmAI GTCTC 1 cut(s) 1153
BsmFI GGGAC 4 cut(s) 1077, 1193, 1405, 1643
BsmI GAATGC 1 cut(s) 587
BsnI GGCC 4 cut(s) 687, 714, 809, 1387
BsoBI CYCGRG 3 cut(s) 384, 522, 1388
Bsp120I GGGCCC 1 cut(s) 712
Bsp1286I GDGCHC 6 cut(s) 360, 391, 467, 716, 1202, 1727
Bsp13I TCCGGA 1 cut(s) 1004
Bsp143I GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
Bsp1720I GCTNAGC 1 cut(s) 1721
BspACI CCGC 8 cut(s) 29, 1185, 1269, 1275, 1482, 1514, 1668, 1788
BspANI GGCC 4 cut(s) 687, 714, 809, 1387
BspCNI CTCAG 5 cut(s) 142, 619, 687, 880, 1713
BspDI ATCGAT 1 cut(s) 1499
BspEI TCCGGA 1 cut(s) 1004
BspFNI CGCG 3 cut(s) 564, 1277, 1514
BspHI TCATGA 2 cut(s) 891, 910
BspLI GGNNCC 9 cut(s) 248, 357, 714, 901, 1009, 1015, 1306, 1393, 1394
BspMAI CTGCAG 1 cut(s) 1753
BspMI ACCTGC 1 cut(s) 300
BspOI GCTAGC 1 cut(s) 1482
BspPI GGATC 4 cut(s) 787, 856, 1299, 1312
BsrBI CCGCTC 1 cut(s) 1668
BsrDI GCAATG 2 cut(s) 1147, 1750
BsrFI RCCGGY 2 cut(s) 404, 862
BsrI ACTGG 5 cut(s) 484, 630, 688, 901, 916
BssAI RCCGGY 2 cut(s) 404, 862
BssECI CCNNGG 3 cut(s) 296, 688, 1388
BssMI GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
BssT1I CCWWGG 1 cut(s) 296
Bst2UI CCWGG 2 cut(s) 153, 944
Bst4CI ACNGT 5 cut(s) 542, 569, 729, 1049, 1064
Bst6I CTCTTC 3 cut(s) 274, 464, 557
BstAPI GCANNNNNTGC 2 cut(s) 119, 1757
BstC8I GCNNGC 3 cut(s) 1069, 1248, 1480
BstDEI CTNAG 8 cut(s) 129, 507, 606, 674, 767, 867, 1411, 1721
BstENI CCTNNNNNAGG 1 cut(s) 605
BstF5I GGATG 6 cut(s) 101, 622, 762, 833, 1425, 1570
BstFNI CGCG 3 cut(s) 564, 1277, 1514
BstH2I RGCGCY 1 cut(s) 1128
BstHHI GCGC 5 cut(s) 26, 564, 1127, 1279, 1762
BstKTI GATC 9 cut(s) 55, 782, 805, 823, 851, 910, 1192, 1307, 1691
BstMAI GTCTC 1 cut(s) 1153
BstMBI GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
BstMCI CGRYCG 2 cut(s) 805, 863
BstNI CCWGG 2 cut(s) 153, 944
BstNSI RCATGY 2 cut(s) 366, 1267
BstSCI CCNGG 5 cut(s) 151, 351, 942, 1387, 1388
BstSFI CTRYAG 3 cut(s) 266, 1219, 1749
BstSLI GKGCMC 2 cut(s) 391, 716
BstUI CGCG 3 cut(s) 564, 1277, 1514
BstV2I GAAGAC 2 cut(s) 3, 320
BstX2I RGATCY 2 cut(s) 779, 1304
BstXI CCANNNNNNTGG 1 cut(s) 1778
BstYI RGATCY 2 cut(s) 779, 1304
Bsu15I ATCGAT 1 cut(s) 1499
Bsu36I CCTNAGG 1 cut(s) 767
BsuRI GGCC 4 cut(s) 687, 714, 809, 1387
BsuTUI ATCGAT 1 cut(s) 1499
BtgZI GCGATG 2 cut(s) 609, 1242
BtsCI GGATG 6 cut(s) 101, 622, 762, 833, 1425, 1570
BtsIMutI CAGTG 2 cut(s) 681, 1069
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 3 cut(s) 1069, 1248, 1480
CaiI CAGNNNCTG 2 cut(s) 791, 1757
CciI TCATGA 2 cut(s) 891, 910
CfoI GCGC 5 cut(s) 26, 564, 1127, 1279, 1762
Cfr10I RCCGGY 2 cut(s) 404, 862
Cfr13I GGNCC 5 cut(s) 712, 713, 807, 1386, 1392
Cfr9I CCCGGG 1 cut(s) 1388
ClaI ATCGAT 1 cut(s) 1499
Csp6I GTAC 3 cut(s) 475, 1031, 1050
CspCI CAANNNNNGTGG 2 cut(s) 615, 650
CviQI GTAC 3 cut(s) 475, 1031, 1050
DdeI CTNAG 8 cut(s) 129, 507, 606, 674, 767, 867, 1411, 1721
DpnI GATC 9 cut(s) 54, 781, 804, 822, 850, 909, 1191, 1306, 1690
DpnII GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
Eam1104I CTCTTC 3 cut(s) 274, 464, 557
EarI CTCTTC 3 cut(s) 274, 464, 557
Ecl136II GAGCTC 2 cut(s) 1200, 1725
Eco130I CCWWGG 1 cut(s) 296
Eco24I GRGCYC 4 cut(s) 360, 716, 1202, 1727
Eco47I GGWCC 1 cut(s) 1392
Eco53kI GAGCTC 2 cut(s) 1200, 1725
Eco57I CTGAAG 2 cut(s) 768, 1268
Eco81I CCTNAGG 1 cut(s) 767
Eco88I CYCGRG 3 cut(s) 384, 522, 1388
EcoICRI GAGCTC 2 cut(s) 1200, 1725
EcoNI CCTNNNNNAGG 1 cut(s) 605
EcoO109I RGGNCCY 2 cut(s) 713, 1392
EcoRII CCWGG 2 cut(s) 151, 942
EcoT14I CCWWGG 1 cut(s) 296
EcoT22I ATGCAT 1 cut(s) 1537
EcoT38I GRGCYC 4 cut(s) 360, 716, 1202, 1727
ErhI CCWWGG 1 cut(s) 296
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FaqI GGGAC 4 cut(s) 1077, 1193, 1405, 1643
FauI CCCGC 1 cut(s) 1781
FauNDI CATATG 1 cut(s) 224
FbaI TGATCA 1 cut(s) 907
FokI GGATG 6 cut(s) 88, 609, 749, 820, 1432, 1577
FriOI GRGCYC 4 cut(s) 360, 716, 1202, 1727
FspBI CTAG 3 cut(s) 756, 1397, 1479
GlaI GCGC 5 cut(s) 25, 563, 1126, 1278, 1761
GsuI CTGGAG 2 cut(s) 918, 1224
HaeII RGCGCY 1 cut(s) 1128
HaeIII GGCC 4 cut(s) 687, 714, 809, 1387
HapII CCGG 9 cut(s) 353, 405, 810, 863, 1005, 1011, 1131, 1167, 1389
HhaI GCGC 5 cut(s) 26, 564, 1127, 1279, 1762
Hin6I GCGC 5 cut(s) 24, 562, 1125, 1277, 1760
HinP1I GCGC 5 cut(s) 24, 562, 1125, 1277, 1760
HincII GTYRAC 2 cut(s) 1623, 1767
HindII GTYRAC 2 cut(s) 1623, 1767
HinfI GANTC 3 cut(s) 963, 1206, 1733
HpaI GTTAAC 1 cut(s) 1623
HpaII CCGG 9 cut(s) 353, 405, 810, 863, 1005, 1011, 1131, 1167, 1389
HphI GGTGA 3 cut(s) 362, 394, 815
Hpy166II GTNNAC 4 cut(s) 370, 975, 1623, 1767
Hpy188III TCNNGA 8 cut(s) 167, 524, 608, 892, 911, 1005, 1150, 1203
Hpy8I GTNNAC 4 cut(s) 370, 975, 1623, 1767
HpyAV CCTTC 5 cut(s) 490, 849, 1221, 1282, 1413
HpyCH4III ACNGT 5 cut(s) 542, 569, 729, 1049, 1064
HpyCH4IV ACGT 2 cut(s) 98, 1029
HpyCH4V TGCA 9 cut(s) 113, 237, 617, 970, 1115, 1535, 1568, 1576, 1751
HpyF3I CTNAG 8 cut(s) 129, 507, 606, 674, 767, 867, 1411, 1721
HpySE526I ACGT 2 cut(s) 98, 1029
HspAI GCGC 5 cut(s) 24, 562, 1125, 1277, 1760
KflI GGGWCCC 1 cut(s) 1392
Kpn2I TCCGGA 1 cut(s) 1004
Ksp22I TGATCA 1 cut(s) 907
KspAI GTTAAC 1 cut(s) 1623
Kzo9I GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
LmnI GCTCC 7 cut(s) 127, 256, 355, 899, 1007, 1361, 1659
LweI GCATC 9 cut(s) 417, 586, 631, 890, 1006, 1522, 1544, 1555, 1707
MaeI CTAG 3 cut(s) 756, 1397, 1479
MaeII ACGT 2 cut(s) 98, 1029
MaeIII GTNAC 3 cut(s) 536, 758, 1430
MalI GATC 9 cut(s) 54, 781, 804, 822, 850, 909, 1191, 1306, 1690
MbiI CCGCTC 1 cut(s) 1668
MboI GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
MflI RGATCY 2 cut(s) 779, 1304
MhlI GDGCHC 6 cut(s) 360, 391, 467, 716, 1202, 1727
MluCI AATT 6 cut(s) 39, 815, 1078, 1086, 1551, 1792
MlyI GAGTC 2 cut(s) 957, 1215
MmeI TCCRAC 5 cut(s) 883, 945, 1068, 1332, 1624
Mph1103I ATGCAT 1 cut(s) 1537
MroI TCCGGA 1 cut(s) 1004
MseI TTAA 3 cut(s) 1026, 1554, 1622
MslI CAYNNNNRTG 1 cut(s) 1715
MspA1I CMGCKG 3 cut(s) 110, 119, 1757
MspI CCGG 9 cut(s) 353, 405, 810, 863, 1005, 1011, 1131, 1167, 1389
MspR9I CCNGG 5 cut(s) 153, 353, 944, 1389, 1390
Mva1269I GAATGC 1 cut(s) 587
MvaI CCWGG 2 cut(s) 153, 944
MvnI CGCG 3 cut(s) 564, 1277, 1514
NciI CCSGG 3 cut(s) 353, 1389, 1390
NdeI CATATG 1 cut(s) 224
NdeII GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
NheI GCTAGC 1 cut(s) 1478
NlaIV GGNNCC 9 cut(s) 248, 357, 714, 901, 1009, 1015, 1306, 1393, 1394
NmeAIII GCCGAG 2 cut(s) 372, 669
NmuCI GTSAC 3 cut(s) 536, 758, 1430
NsiI ATGCAT 1 cut(s) 1537
NspI RCATGY 2 cut(s) 366, 1267
PagI TCATGA 2 cut(s) 891, 910
PciI ACATGT 1 cut(s) 1263
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PctI GAATGC 1 cut(s) 587
PfeI GAWTC 1 cut(s) 1733
Ple19I CGATCG 1 cut(s) 805
PleI GAGTC 2 cut(s) 957, 1214
PpsI GAGTC 2 cut(s) 957, 1214
PpuMI RGGWCCY 1 cut(s) 1392
PscI ACATGT 1 cut(s) 1263
Psp124BI GAGCTC 2 cut(s) 1202, 1727
Psp5II RGGWCCY 1 cut(s) 1392
Psp6I CCWGG 2 cut(s) 151, 942
PspGI CCWGG 2 cut(s) 151, 942
PspN4I GGNNCC 9 cut(s) 248, 357, 714, 901, 1009, 1015, 1306, 1393, 1394
PspOMI GGGCCC 1 cut(s) 712
PspPI GGNCC 5 cut(s) 712, 713, 807, 1386, 1392
PspPPI RGGWCCY 1 cut(s) 1392
PstI CTGCAG 1 cut(s) 1753
PstNI CAGNNNCTG 2 cut(s) 791, 1757
PsuI RGATCY 2 cut(s) 779, 1304
PvuI CGATCG 1 cut(s) 805
PvuII CAGCTG 3 cut(s) 110, 119, 1757
RsaI GTAC 3 cut(s) 476, 1032, 1051
RsaNI GTAC 3 cut(s) 475, 1031, 1050
RseI CAYNNNNRTG 1 cut(s) 1715
SacI GAGCTC 2 cut(s) 1202, 1727
SaqAI TTAA 3 cut(s) 1026, 1554, 1622
Sau3AI GATC 9 cut(s) 52, 779, 802, 820, 848, 907, 1189, 1304, 1688
Sau96I GGNCC 5 cut(s) 712, 713, 807, 1386, 1392
ScaI AGTACT 1 cut(s) 1051
SchI GAGTC 2 cut(s) 957, 1215
ScrFI CCNGG 5 cut(s) 153, 353, 944, 1389, 1390
SduI GDGCHC 6 cut(s) 360, 391, 467, 716, 1202, 1727
SfaNI GCATC 9 cut(s) 417, 586, 631, 890, 1006, 1522, 1544, 1555, 1707
SfcI CTRYAG 3 cut(s) 266, 1219, 1749
SinI GGWCC 1 cut(s) 1392
SmaI CCCGGG 1 cut(s) 1390
SmiMI CAYNNNNRTG 1 cut(s) 1715
SmlI CTYRAG 2 cut(s) 305, 556
SmoI CTYRAG 2 cut(s) 305, 556
Sse9I AATT 6 cut(s) 39, 815, 1078, 1086, 1551, 1792
SsiI CCGC 8 cut(s) 29, 1185, 1269, 1275, 1482, 1514, 1668, 1788
SspI AATATT 1 cut(s) 1600
SspMI CTAG 3 cut(s) 756, 1397, 1479
SstI GAGCTC 2 cut(s) 1202, 1727
StyD4I CCNGG 5 cut(s) 151, 351, 942, 1387, 1388
StyI CCWWGG 1 cut(s) 296
TaaI ACNGT 5 cut(s) 542, 569, 729, 1049, 1064
TaiI ACGT 2 cut(s) 101, 1032
TaqI TCGA 6 cut(s) 467, 738, 819, 1151, 1364, 1499
TasI AATT 6 cut(s) 39, 815, 1078, 1086, 1551, 1792
TatI WGTACW 1 cut(s) 1049
TauI GCSGC 2 cut(s) 1188, 1517
TfiI GAWTC 1 cut(s) 1733
Tru1I TTAA 3 cut(s) 1026, 1554, 1622
Tru9I TTAA 3 cut(s) 1026, 1554, 1622
TscAI CASTG 2 cut(s) 688, 1069
TseFI GTSAC 3 cut(s) 536, 758, 1430
Tsp45I GTSAC 3 cut(s) 536, 758, 1430
TspDTI ATGAA 6 cut(s) 6, 211, 880, 947, 1158, 1481
TspGWI ACGGA 2 cut(s) 675, 1331
TspMI CCCGGG 1 cut(s) 1388
TspRI CASTG 2 cut(s) 688, 1069
VpaK11BI GGWCC 1 cut(s) 1392
XagI CCTNNNNNAGG 1 cut(s) 605
XapI RAATTY 1 cut(s) 1792
XceI RCATGY 2 cut(s) 366, 1267
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XmaI CCCGGG 1 cut(s) 1388
XspI CTAG 3 cut(s) 756, 1397, 1479
ZrmI AGTACT 1 cut(s) 1051
Zsp2I ATGCAT 1 cut(s) 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.