RchiOBHm_Chr4g0445661

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0009753
Physical Location & Seq
Forward (+)
66057354 .. 66062579
5226 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41325

Sequence Viewer

Length: 1758 bp
ATGGCTGCATCTTCTTCTTCGCTTTTCGGAATTAGAGAAGAAGATCAAAACTTGATGAAGCAACAGCAGCATTCCAGCTCCACACCAACATCATCCACAGCCGCCGCGCCTCTGGCACCACCACCGCAGAAGAAGAAGAGAAACCAACCTGGAACACCAAATCCAGAAGCGGAAGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAACTAAAGCAGAAGACTACAAAAGAACCCAAACGCAAGGTCTACCTGTGCCCGGAGCCCACCTGCGTCCATCACGACCCGTCTCGGGCCCTCGGCGACCTCACCGGAATCAAGAAGCACTTCTCCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGCGCTACGCCGTTCAGTCTGATTGGAAGGCTCATTCTAAGACTTGCGGCACTCGGGAGTACCGATGCGACTGTGGTACTCTCTTCTCCAGGAGGGACAGTTTTATCACTCATAGGGCCTTCTGTGATGCCCTGGCTCAGGAAAGTGCAAGACATCAACCTAATCTGAGCAGCCTTGGCAGCAACTTATATGGAGGTACCAGCAACACTGGCCTAGCCTTATCTCATCATCACCATCAACAACAAGTTGTGGGCCCTAACATTGATCATCATCACCACAACAATCAATCAACGGCGCCTGCTGACATCTTACGACTCGGAGGCGGCAGCGGCAATGCCCGGACCGGACAGTTCGATCATCTCCTTTCTCCTCCTTCCATGGGGTCGTCTTTTCGTCCGGCGCAATCTTCGGCACCCTTCTTCATTAATCAAGACCAATCTAGCCAGCAATACCATCACGATCAAGAACAGTTGCAGAGCAAACAATTCCATGGACTGATGCAATTTTCTGATCATCAGAACAACAACTCTTCCTCTGGAGGCAATCTGTTTAACCTACCTTTCTTATCAAACAGCAGCAATAGCAACAACAGCAACAACGCCGGTGGCGCCAATAGTACTAATCTACTGCTTCATCCTGATCACCAGTACAACAGTAATGGCGGTGAAGGCGGGTCGATTCTCTTCTCAGGTCACATGATGGGTGGAGGCGGTGGTGATCACATGAGCTCCGGCAATGTCTCTTCGCTCTATAGTTCTCAAGTACAAAACAACCATCATGGTGCAGGTGCAGCCGTCTCGCACATGTCCGCCACAGCGCTGCTTCAGAAGGCGGCTCAAATGGGGTCAACTACTTCGAGCAACAATACTTCTGCCTCGCTCCTAAGAAGCTTTGGAAGCACTTCCTCGACTAAATCTGAACGCCCCGCCGCGGCGGCCTCCCTTGTTCCTGCCAATTTAGGCGGCATTTTTGGTGGTGGCAGTGAAAATGAGAACAACCTCCAAGACCTAATGAACTCTTTTGCTGCTGGAGGGAGCTCCTCTATTTTCGGAAGCGGGTCATTTGGCAGTGGATTTCATGACGTGGCAAGTAGGGACGAGCCCAAGTTGCCGGCGGTGAGCATAGTAGCCGGGTCTGATAGGTTAACTAGGGATTTTCTTGGTGTTGGTCAGATTGTTAGGAGTATGAGCGGTGGGCAACAACAAACTCAGATCGAGCATATGAGCTCCTTGGATTCAGAGAGCAATGCTGCGCCGTCAACCCAATCTTTTGGAGGAGGTGGGAATTTTTAG

Protein Analysis

585

Amino Acids

62.56

Weight (kDa)

9.08

Isoelectric Point (pI)

55.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 110 - 144 1.4e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 148 - 172 1.2e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 175 - 212 3e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 368, 1241
Acc36I ACCTGC 3 cut(s) 297, 368, 1241
Acc65I GGTACC 1 cut(s) 662
AccB1I GGYRCC 5 cut(s) 115, 662, 760, 877, 1073
AccBSI CCGCTC 1 cut(s) 1656
AccI GTMKAC 1 cut(s) 339
AccII CGCG 2 cut(s) 107, 1397
AcsI RAATTY 1 cut(s) 1750
AcuI CTGAAG 1 cut(s) 1274
AcyI GRCGYC 2 cut(s) 761, 1074
AfaI GTAC 6 cut(s) 527, 544, 664, 1084, 1115, 1230
AfeI AGCGCT 2 cut(s) 470, 1284
AfiI CCNNNNNNNGG 5 cut(s) 349, 382, 604, 845, 1396
AflIII ACRYGT 1 cut(s) 1269
AjiI CACGTC 1 cut(s) 1549
AjnI CCWGG 3 cut(s) 148, 554, 597
AloI GAACNNNNNNTCC 2 cut(s) 145, 177
AluBI AGCT 6 cut(s) 78, 268, 1194, 1356, 1503, 1692
AluI AGCT 6 cut(s) 78, 268, 1194, 1356, 1503, 1692
Alw21I GWGCWC 4 cut(s) 464, 1196, 1505, 1694
Alw26I GTCTC 3 cut(s) 384, 1210, 1267
Ama87I CYCGRG 2 cut(s) 381, 519
Aor51HI AGCGCT 2 cut(s) 470, 1284
AoxI GGCC 5 cut(s) 384, 582, 676, 718, 1401
ApaI GGGCCC 2 cut(s) 388, 722
ApoI RAATTY 1 cut(s) 1750
ArsI GACNNNNNNTTYG 2 cut(s) 321, 353
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 2 cut(s) 416, 1366
Asp718I GGTACC 1 cut(s) 662
AspLEI GCGC 7 cut(s) 109, 471, 763, 868, 1076, 1285, 1720
AspS9I GGNCC 6 cut(s) 384, 385, 582, 718, 719, 807
AsuC2I CCSGG 3 cut(s) 350, 805, 1597
AsuHPI GGTGA 7 cut(s) 391, 689, 731, 1100, 1142, 1193, 1594
AvaI CYCGRG 2 cut(s) 381, 519
AvaII GGWCC 1 cut(s) 807
BaeGI GKGCMC 3 cut(s) 350, 388, 722
BanI GGYRCC 5 cut(s) 115, 662, 760, 877, 1073
BanII GRGCYC 7 cut(s) 357, 388, 722, 1196, 1505, 1569, 1694
BbsI GAAGAC 1 cut(s) 317
Bbv12I GWGCWC 4 cut(s) 464, 1196, 1505, 1694
BbvI GCAGC 9 cut(s) 79, 648, 657, 804, 1053, 1268, 1272, 1477, 1702
BccI CCATC 5 cut(s) 375, 708, 927, 1159, 1248
BceAI ACGGC 5 cut(s) 448, 461, 774, 1244, 1705
BcgI CGANNNNNNTGC 2 cut(s) 1245, 1279
BciT130I CCWGG 3 cut(s) 150, 556, 599
BclI TGATCA 4 cut(s) 730, 976, 1105, 1183
BcnI CCSGG 3 cut(s) 350, 805, 1597
BcoDI GTCTC 3 cut(s) 384, 1210, 1267
BfaI CTAG 3 cut(s) 680, 906, 1614
BfmI CTRYAG 2 cut(s) 263, 1216
BfoI RGCGCY 4 cut(s) 472, 764, 1077, 1286
BfuAI ACCTGC 3 cut(s) 297, 368, 1241
BglI GCCNNNNNGGC 1 cut(s) 1400
BmcAI AGTACT 1 cut(s) 1084
Bme1390I CCNGG 6 cut(s) 150, 350, 556, 599, 805, 1597
Bme18I GGWCC 1 cut(s) 807
BmeT110I CYCGRG 2 cut(s) 381, 519
BmgBI CACGTC 1 cut(s) 1549
BmgT120I GGNCC 6 cut(s) 384, 385, 582, 718, 719, 807
BmiI GGNNCC 9 cut(s) 117, 245, 354, 386, 664, 720, 762, 879, 1075
BmrFI CCNGG 6 cut(s) 150, 350, 556, 599, 805, 1597
BmsI GCATC 4 cut(s) 17, 521, 583, 954
BpiI GAAGAC 1 cut(s) 317
BpmI CTGGAG 4 cut(s) 406, 538, 1023, 1515
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 1 cut(s) 1209
BpuMI CCSGG 3 cut(s) 350, 805, 1597
BsaBI GATNNNNATC 1 cut(s) 735
BsaHI GRCGYC 2 cut(s) 761, 1074
BsaJI CCNNGG 8 cut(s) 293, 388, 597, 640, 843, 955, 1395, 1695
BsaWI WCCGGW 2 cut(s) 401, 809
BsaXI ACNNNNNCTCC 6 cut(s) 446, 476, 550, 580, 1178, 1208
Bsc4I CCNNNNNNNGG 5 cut(s) 349, 382, 604, 845, 1396
Bse118I RCCGGY 2 cut(s) 1067, 1576
Bse1I ACTGG 2 cut(s) 679, 1111
Bse3DI GCAATG 3 cut(s) 805, 1207, 1717
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 3 cut(s) 150, 556, 599
BseDI CCNNGG 8 cut(s) 293, 388, 597, 640, 843, 955, 1395, 1695
BseGI GGATG 2 cut(s) 92, 1099
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 5 cut(s) 349, 382, 604, 845, 1396
BseMI GCAATG 3 cut(s) 805, 1207, 1717
BseMII CTCAG 4 cut(s) 617, 623, 1167, 1688
BseNI ACTGG 2 cut(s) 679, 1111
BseRI GAGGAG 3 cut(s) 825, 1495, 1755
BseSI GKGCMC 3 cut(s) 350, 388, 722
BseXI GCAGC 9 cut(s) 79, 648, 657, 804, 1053, 1268, 1272, 1477, 1702
BsgI GTGCAG 2 cut(s) 1269, 1275
Bsh1236I CGCG 2 cut(s) 107, 1397
BshFI GGCC 5 cut(s) 386, 584, 678, 720, 1403
BshNI GGYRCC 5 cut(s) 115, 662, 760, 877, 1073
BsiHKAI GWGCWC 4 cut(s) 464, 1196, 1505, 1694
BsiHKCI CYCGRG 2 cut(s) 381, 519
BsiSI CCGG 9 cut(s) 350, 402, 805, 810, 863, 1068, 1197, 1577, 1596
BslFI GGGAC 2 cut(s) 575, 1574
BslI CCNNNNNNNGG 5 cut(s) 349, 382, 604, 845, 1396
BsmAI GTCTC 3 cut(s) 384, 1210, 1267
BsmBI CGTCTC 2 cut(s) 384, 1267
BsmFI GGGAC 2 cut(s) 575, 1574
BsmI GAATGC 1 cut(s) 70
BsnI GGCC 5 cut(s) 386, 584, 678, 720, 1403
BsoBI CYCGRG 2 cut(s) 381, 519
Bsp120I GGGCCC 2 cut(s) 384, 718
Bsp1286I GDGCHC 9 cut(s) 350, 357, 388, 464, 722, 1196, 1505, 1569, 1694
Bsp143I GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
Bsp19I CCATGG 2 cut(s) 843, 955
BspANI GGCC 5 cut(s) 386, 584, 678, 720, 1403
BspCNI CTCAG 4 cut(s) 616, 624, 1166, 1687
BspFNI CGCG 2 cut(s) 107, 1397
BspHI TCATGA 1 cut(s) 1543
BspLI GGNNCC 9 cut(s) 117, 245, 354, 386, 664, 720, 762, 879, 1075
BspMI ACCTGC 3 cut(s) 297, 368, 1241
BspT107I GGYRCC 5 cut(s) 115, 662, 760, 877, 1073
BsrBI CCGCTC 1 cut(s) 1656
BsrDI GCAATG 3 cut(s) 805, 1207, 1717
BsrFI RCCGGY 2 cut(s) 1067, 1576
BsrI ACTGG 2 cut(s) 679, 1111
BssAI RCCGGY 2 cut(s) 1067, 1576
BssECI CCNNGG 8 cut(s) 293, 388, 597, 640, 843, 955, 1395, 1695
BssMI GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
BssNI GRCGYC 2 cut(s) 761, 1074
BssT1I CCWWGG 5 cut(s) 293, 640, 843, 955, 1695
Bst2UI CCWGG 3 cut(s) 150, 556, 599
Bst4CI ACNGT 5 cut(s) 539, 566, 816, 936, 1121
Bst6I CTCTTC 6 cut(s) 131, 271, 554, 1000, 1154, 1213
BstACI GRCGYC 2 cut(s) 761, 1074
BstC8I GCNNGC 3 cut(s) 765, 911, 1578
BstDEI CTNAG 6 cut(s) 504, 603, 632, 1153, 1349, 1674
BstDSI CCRYGG 3 cut(s) 843, 955, 1395
BstENI CCTNNNNNAGG 1 cut(s) 602
BstF5I GGATG 2 cut(s) 92, 1099
BstFNI CGCG 2 cut(s) 107, 1397
BstH2I RGCGCY 4 cut(s) 472, 764, 1077, 1286
BstHHI GCGC 7 cut(s) 109, 471, 763, 868, 1076, 1285, 1720
BstKTI GATC 8 cut(s) 46, 733, 823, 928, 979, 1108, 1186, 1680
BstMAI GTCTC 3 cut(s) 384, 1210, 1267
BstMBI GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
BstNI CCWGG 3 cut(s) 150, 556, 599
BstNSI RCATGY 1 cut(s) 1273
BstSCI CCNGG 6 cut(s) 148, 348, 554, 597, 803, 1595
BstSFI CTRYAG 2 cut(s) 263, 1216
BstSLI GKGCMC 3 cut(s) 350, 388, 722
BstUI CGCG 2 cut(s) 107, 1397
BstV1I GCAGC 9 cut(s) 79, 648, 657, 804, 1053, 1268, 1272, 1477, 1702
BstV2I GAAGAC 1 cut(s) 317
BstXI CCANNNNNNTGG 1 cut(s) 1736
BsuRI GGCC 5 cut(s) 386, 584, 678, 720, 1403
BtgI CCRYGG 3 cut(s) 843, 955, 1395
BtrI CACGTC 1 cut(s) 1549
BtsCI GGATG 2 cut(s) 92, 1099
BtsI GCAGTG 2 cut(s) 1453, 1540
BtsIMutI CAGTG 3 cut(s) 672, 1453, 1540
BveI ACCTGC 3 cut(s) 297, 368, 1241
Cac8I GCNNGC 3 cut(s) 765, 911, 1578
CciI TCATGA 1 cut(s) 1543
CfoI GCGC 7 cut(s) 109, 471, 763, 868, 1076, 1285, 1720
Cfr10I RCCGGY 2 cut(s) 1067, 1576
Cfr13I GGNCC 6 cut(s) 384, 385, 582, 718, 719, 807
Cfr42I CCGCGG 1 cut(s) 1398
CpoI CGGWCCG 1 cut(s) 807
CseI GACGC 1 cut(s) 352
Csp6I GTAC 6 cut(s) 526, 543, 663, 1083, 1114, 1229
CspCI CAANNNNNGTGG 2 cut(s) 1051, 1086
CspI CGGWCCG 1 cut(s) 807
CviAII CATG 7 cut(s) 844, 956, 1162, 1189, 1244, 1270, 1544
CviQI GTAC 6 cut(s) 526, 543, 663, 1083, 1114, 1229
DdeI CTNAG 6 cut(s) 504, 603, 632, 1153, 1349, 1674
DinI GGCGCC 2 cut(s) 762, 1075
DpnI GATC 8 cut(s) 45, 732, 822, 927, 978, 1107, 1185, 1679
DpnII GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
Eam1104I CTCTTC 6 cut(s) 131, 271, 554, 1000, 1154, 1213
EarI CTCTTC 6 cut(s) 131, 271, 554, 1000, 1154, 1213
EciI GGCGGA 1 cut(s) 1264
Ecl136II GAGCTC 3 cut(s) 1194, 1503, 1692
Eco130I CCWWGG 5 cut(s) 293, 640, 843, 955, 1695
Eco24I GRGCYC 7 cut(s) 357, 388, 722, 1196, 1505, 1569, 1694
Eco47I GGWCC 1 cut(s) 807
Eco47III AGCGCT 2 cut(s) 470, 1284
Eco53kI GAGCTC 3 cut(s) 1194, 1503, 1692
Eco57I CTGAAG 1 cut(s) 1274
Eco88I CYCGRG 2 cut(s) 381, 519
EcoICRI GAGCTC 3 cut(s) 1194, 1503, 1692
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoO109I RGGNCCY 3 cut(s) 385, 582, 719
EcoRII CCWGG 3 cut(s) 148, 554, 597
EcoT14I CCWWGG 5 cut(s) 293, 640, 843, 955, 1695
EcoT38I GRGCYC 7 cut(s) 357, 388, 722, 1196, 1505, 1569, 1694
EgeI GGCGCC 2 cut(s) 762, 1075
EheI GGCGCC 2 cut(s) 762, 1075
ErhI CCWWGG 5 cut(s) 293, 640, 843, 955, 1695
Esp3I CGTCTC 2 cut(s) 384, 1267
FaeI CATG 7 cut(s) 847, 959, 1165, 1192, 1247, 1273, 1547
FalI AAGNNNNNCTT 2 cut(s) 401, 433
FaqI GGGAC 2 cut(s) 575, 1574
FatI CATG 7 cut(s) 843, 955, 1161, 1188, 1243, 1269, 1543
FauI CCCGC 3 cut(s) 1130, 1399, 1514
FauNDI CATATG 2 cut(s) 221, 1686
FbaI TGATCA 4 cut(s) 730, 976, 1105, 1183
FblI GTMKAC 1 cut(s) 339
FokI GGATG 2 cut(s) 79, 1086
FriOI GRGCYC 7 cut(s) 357, 388, 722, 1196, 1505, 1569, 1694
FspBI CTAG 3 cut(s) 680, 906, 1614
GlaI GCGC 7 cut(s) 108, 470, 762, 867, 1075, 1284, 1719
GsuI CTGGAG 4 cut(s) 406, 538, 1023, 1515
HaeII RGCGCY 4 cut(s) 472, 764, 1077, 1286
HaeIII GGCC 5 cut(s) 386, 584, 678, 720, 1403
HapII CCGG 9 cut(s) 350, 402, 805, 810, 863, 1068, 1197, 1577, 1596
HgaI GACGC 1 cut(s) 352
HhaI GCGC 7 cut(s) 109, 471, 763, 868, 1076, 1285, 1720
Hin1I GRCGYC 2 cut(s) 761, 1074
Hin1II CATG 7 cut(s) 847, 959, 1165, 1192, 1247, 1273, 1547
Hin6I GCGC 7 cut(s) 107, 469, 761, 866, 1074, 1283, 1718
HinP1I GCGC 7 cut(s) 107, 469, 761, 866, 1074, 1283, 1718
HincII GTYRAC 3 cut(s) 1314, 1611, 1725
HindII GTYRAC 3 cut(s) 1314, 1611, 1725
HindIII AAGCTT 1 cut(s) 1354
HinfI GANTC 4 cut(s) 405, 780, 1144, 1700
HpaI GTTAAC 1 cut(s) 1611
HpaII CCGG 9 cut(s) 350, 402, 805, 810, 863, 1068, 1197, 1577, 1596
HphI GGTGA 7 cut(s) 391, 689, 731, 1100, 1142, 1193, 1594
Hpy166II GTNNAC 4 cut(s) 340, 1314, 1611, 1725
Hpy8I GTNNAC 4 cut(s) 340, 1314, 1611, 1725
HpyAV CCTTC 6 cut(s) 487, 595, 849, 892, 1127, 1288
HpyCH4III ACNGT 5 cut(s) 539, 566, 816, 936, 1121
HpyCH4IV ACGT 1 cut(s) 1548
HpyCH4V TGCA 7 cut(s) 8, 234, 614, 940, 967, 1250, 1256
HpyF3I CTNAG 6 cut(s) 504, 603, 632, 1153, 1349, 1674
HpySE526I ACGT 1 cut(s) 1548
Hsp92I GRCGYC 2 cut(s) 761, 1074
Hsp92II CATG 7 cut(s) 847, 959, 1165, 1192, 1247, 1273, 1547
HspAI GCGC 7 cut(s) 107, 469, 761, 866, 1074, 1283, 1718
KasI GGCGCC 2 cut(s) 760, 1073
KpnI GGTACC 1 cut(s) 666
KroI GCCGGC 1 cut(s) 1576
KroNI GCCGGC 1 cut(s) 1578
Ksp22I TGATCA 4 cut(s) 730, 976, 1105, 1183
KspAI GTTAAC 1 cut(s) 1611
KspI CCGCGG 1 cut(s) 1398
Kzo9I GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
Lsp1109I GCAGC 9 cut(s) 79, 648, 657, 804, 1053, 1268, 1272, 1477, 1702
LweI GCATC 4 cut(s) 17, 521, 583, 954
MaeI CTAG 3 cut(s) 680, 906, 1614
MaeII ACGT 1 cut(s) 1548
MaeIII GTNAC 1 cut(s) 1157
MalI GATC 8 cut(s) 45, 732, 822, 927, 978, 1107, 1185, 1679
MbiI CCGCTC 1 cut(s) 1656
MboI GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
MhlI GDGCHC 9 cut(s) 350, 357, 388, 464, 722, 1196, 1505, 1569, 1694
MluCI AATT 5 cut(s) 30, 950, 968, 1420, 1750
Mly113I GGCGCC 2 cut(s) 761, 1074
MlyI GAGTC 1 cut(s) 774
MroNI GCCGGC 1 cut(s) 1576
MroXI GAANNNNTTC 2 cut(s) 416, 1366
MseI TTAA 3 cut(s) 891, 1017, 1610
MslI CAYNNNNRTG 1 cut(s) 1245
MspA1I CMGCKG 2 cut(s) 795, 1397
MspI CCGG 9 cut(s) 350, 402, 805, 810, 863, 1068, 1197, 1577, 1596
MspR9I CCNGG 6 cut(s) 150, 350, 556, 599, 805, 1597
Mva1269I GAATGC 1 cut(s) 70
MvaI CCWGG 3 cut(s) 150, 556, 599
MvnI CGCG 2 cut(s) 107, 1397
NaeI GCCGGC 1 cut(s) 1578
NarI GGCGCC 2 cut(s) 761, 1074
NciI CCSGG 3 cut(s) 350, 805, 1597
NcoI CCATGG 2 cut(s) 843, 955
NdeI CATATG 2 cut(s) 221, 1686
NdeII GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
NgoMIV GCCGGC 1 cut(s) 1576
NlaIII CATG 7 cut(s) 847, 959, 1165, 1192, 1247, 1273, 1547
NlaIV GGNNCC 9 cut(s) 117, 245, 354, 386, 664, 720, 762, 879, 1075
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 1 cut(s) 1157
NspI RCATGY 1 cut(s) 1273
PagI TCATGA 1 cut(s) 1543
PaqCI CACCTGC 2 cut(s) 368, 1241
PciI ACATGT 1 cut(s) 1269
PcsI WCGNNNNNNNCGW 1 cut(s) 526
PctI GAATGC 1 cut(s) 70
PdiI GCCGGC 1 cut(s) 1578
PdmI GAANNNNTTC 2 cut(s) 416, 1366
PfeI GAWTC 3 cut(s) 405, 1144, 1700
PfoI TCCNGGA 1 cut(s) 554
PleI GAGTC 1 cut(s) 774
PluTI GGCGCC 2 cut(s) 764, 1077
PpsI GAGTC 1 cut(s) 774
PscI ACATGT 1 cut(s) 1269
PshBI ATTAAT 1 cut(s) 891
Psp124BI GAGCTC 3 cut(s) 1196, 1505, 1694
Psp6I CCWGG 3 cut(s) 148, 554, 597
PspGI CCWGG 3 cut(s) 148, 554, 597
PspN4I GGNNCC 9 cut(s) 117, 245, 354, 386, 664, 720, 762, 879, 1075
PspOMI GGGCCC 2 cut(s) 384, 718
PspPI GGNCC 6 cut(s) 384, 385, 582, 718, 719, 807
RsaI GTAC 6 cut(s) 527, 544, 664, 1084, 1115, 1230
RsaNI GTAC 6 cut(s) 526, 543, 663, 1083, 1114, 1229
RseI CAYNNNNRTG 1 cut(s) 1245
Rsr2I CGGWCCG 1 cut(s) 807
RsrII CGGWCCG 1 cut(s) 807
SacI GAGCTC 3 cut(s) 1196, 1505, 1694
SacII CCGCGG 1 cut(s) 1398
SaqAI TTAA 3 cut(s) 891, 1017, 1610
Sau3AI GATC 8 cut(s) 43, 730, 820, 925, 976, 1105, 1183, 1677
Sau96I GGNCC 6 cut(s) 384, 385, 582, 718, 719, 807
ScaI AGTACT 1 cut(s) 1084
SchI GAGTC 1 cut(s) 774
ScrFI CCNGG 6 cut(s) 150, 350, 556, 599, 805, 1597
SduI GDGCHC 9 cut(s) 350, 357, 388, 464, 722, 1196, 1505, 1569, 1694
SfaNI GCATC 4 cut(s) 17, 521, 583, 954
SfcI CTRYAG 2 cut(s) 263, 1216
SfoI GGCGCC 2 cut(s) 762, 1075
Sfr303I CCGCGG 1 cut(s) 1398
SgrAI CRCCGGYG 1 cut(s) 1067
SgrBI CCGCGG 1 cut(s) 1398
SinI GGWCC 1 cut(s) 807
SmiMI CAYNNNNRTG 1 cut(s) 1245
SmlI CTYRAG 1 cut(s) 1224
SmoI CTYRAG 1 cut(s) 1224
Sse9I AATT 5 cut(s) 30, 950, 968, 1420, 1750
SspDI GGCGCC 2 cut(s) 760, 1073
SspMI CTAG 3 cut(s) 680, 906, 1614
SstI GAGCTC 3 cut(s) 1196, 1505, 1694
StyD4I CCNGG 6 cut(s) 148, 348, 554, 597, 803, 1595
StyI CCWWGG 5 cut(s) 293, 640, 843, 955, 1695
TaaI ACNGT 5 cut(s) 539, 566, 816, 936, 1121
TaiI ACGT 1 cut(s) 1551
TaqI TCGA 5 cut(s) 819, 1142, 1322, 1373, 1680
TasI AATT 5 cut(s) 30, 950, 968, 1420, 1750
TatI WGTACW 3 cut(s) 1082, 1113, 1228
TfiI GAWTC 3 cut(s) 405, 1144, 1700
Tru1I TTAA 3 cut(s) 891, 1017, 1610
Tru9I TTAA 3 cut(s) 891, 1017, 1610
TscAI CASTG 3 cut(s) 679, 1453, 1540
TseFI GTSAC 1 cut(s) 1157
Tsp45I GTSAC 1 cut(s) 1157
TspDTI ATGAA 6 cut(s) 71, 208, 877, 1088, 1493, 1532
TspRI CASTG 3 cut(s) 679, 1453, 1540
VpaK11BI GGWCC 1 cut(s) 807
VspI ATTAAT 1 cut(s) 891
XagI CCTNNNNNAGG 1 cut(s) 602
XapI RAATTY 1 cut(s) 1750
XceI RCATGY 1 cut(s) 1273
XcmI CCANNNNNNNNNTGG 1 cut(s) 199
XmiI GTMKAC 1 cut(s) 339
XmnI GAANNNNTTC 2 cut(s) 416, 1366
XspI CTAG 3 cut(s) 680, 906, 1614
ZrmI AGTACT 1 cut(s) 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.