ZINC FINGER protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02070 AT2G02070 |
| fragaria_vesca | FvH4_4g36040 FvH4_4g36040 FvH4_4g36040 |
| malus_domestica | MD13G1013100.v1.1 MD16G1009600.v1.1 |
| prunus_persica | Prupe.1G341000_v2.0.a1 Prupe.1G341000_v2.0.a1 |
| pyrus_communis | pycom13g01060 pycom16g00940 |
| rosa_chinensis | RchiOBHm_Chr4g0445661 |
| rosa_laevigata | RLG00000005719 |
| rosa_multiflora | Rmu_sc0003637.1_g000021 |
| rosa_roxburghii | Rroxscaffold_5G00386140 |
| rosa_rugosa | Rorug04G0364400 Rorug04G0364500 |
| rosa_samantha | Rh4AG425400 Rh4CG452400 Rh4DG433700 |
| rosa_wichuraiana | Rw4G036440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1518 |
| Acc36I | ACCTGC | 2 cut(s) | 300, 1518 |
| AccBSI | CCGCTC | 1 cut(s) | 1728 |
| AccI | GTMKAC | 1 cut(s) | 342 |
| AciI | CCGC | 9 cut(s) | 29, 92, 626, 788, 888, 1164, 1218, 1329, 1728 |
| AclWI | GGATC | 1 cut(s) | 933 |
| AcsI | RAATTY | 2 cut(s) | 720, 1852 |
| AdeI | CACNNNGTG | 1 cut(s) | 1213 |
| AfaI | GTAC | 1 cut(s) | 757 |
| AfeI | AGCGCT | 1 cut(s) | 473 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 922, 928 |
| AflII | CTTAAG | 1 cut(s) | 772 |
| AflIII | ACRYGT | 1 cut(s) | 1317 |
| AgsI | TTSAA | 4 cut(s) | 734, 1138, 1340, 1371 |
| AjnI | CCWGG | 4 cut(s) | 151, 831, 921, 942 |
| AleI | CACNNNNGTG | 1 cut(s) | 1761 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 148, 180 |
| Alw21I | GWGCWC | 5 cut(s) | 391, 467, 641, 1758, 1793 |
| Alw26I | GTCTC | 2 cut(s) | 1616, 1652 |
| AlwI | GGATC | 1 cut(s) | 933 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 119, 764, 1427 |
| Ama87I | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| Aor51HI | AGCGCT | 1 cut(s) | 473 |
| AoxI | GGCC | 6 cut(s) | 498, 585, 682, 709, 946, 1442 |
| ApaI | GGGCCC | 1 cut(s) | 713 |
| ApoI | RAATTY | 2 cut(s) | 720, 1852 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 324, 356 |
| AseI | ATTAAT | 2 cut(s) | 1272, 1611 |
| AspLEI | GCGC | 5 cut(s) | 474, 803, 1315, 1453, 1822 |
| AspS9I | GGNCC | 8 cut(s) | 499, 585, 709, 710, 810, 946, 1443, 1498 |
| AsuC2I | CCSGG | 3 cut(s) | 1237, 1446, 1447 |
| AsuHPI | GGTGA | 5 cut(s) | 394, 407, 1232, 1666, 1726 |
| AvaI | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| AvaII | GGWCC | 2 cut(s) | 810, 1498 |
| BaeGI | GKGCMC | 2 cut(s) | 353, 713 |
| BanII | GRGCYC | 6 cut(s) | 360, 391, 713, 839, 1361, 1793 |
| BbsI | GAAGAC | 2 cut(s) | 3, 320 |
| Bbv12I | GWGCWC | 5 cut(s) | 391, 467, 641, 1758, 1793 |
| BbvCI | CCTCAGC | 3 cut(s) | 671, 865, 1420 |
| BceAI | ACGGC | 3 cut(s) | 451, 464, 1807 |
| BciT130I | CCWGG | 4 cut(s) | 153, 833, 923, 944 |
| BciVI | GTATCC | 1 cut(s) | 1233 |
| BclI | TGATCA | 3 cut(s) | 892, 1222, 1489 |
| BcnI | CCSGG | 3 cut(s) | 1237, 1446, 1447 |
| BcoDI | GTCTC | 2 cut(s) | 1616, 1652 |
| BfaI | CTAG | 2 cut(s) | 426, 522 |
| BfmI | CTRYAG | 3 cut(s) | 111, 266, 1252 |
| BfoI | RGCGCY | 4 cut(s) | 475, 804, 1454, 1823 |
| BfrI | CTTAAG | 1 cut(s) | 772 |
| BfuAI | ACCTGC | 2 cut(s) | 300, 1518 |
| BfuI | GTATCC | 1 cut(s) | 1233 |
| Bme1390I | CCNGG | 7 cut(s) | 153, 833, 923, 944, 1237, 1446, 1447 |
| Bme18I | GGWCC | 2 cut(s) | 810, 1498 |
| BmeT110I | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| BmgT120I | GGNCC | 8 cut(s) | 499, 585, 709, 710, 810, 946, 1443, 1498 |
| BmiI | GGNNCC | 4 cut(s) | 711, 1033, 1360, 1458 |
| BmrFI | CCNGG | 7 cut(s) | 153, 833, 923, 944, 1237, 1446, 1447 |
| BmrI | ACTGGG | 1 cut(s) | 624 |
| BmsI | GCATC | 6 cut(s) | 417, 586, 631, 878, 1313, 1576 |
| BmuI | ACTGGG | 1 cut(s) | 624 |
| BoxI | GACNNNNGTC | 1 cut(s) | 744 |
| BpiI | GAAGAC | 2 cut(s) | 3, 320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 449, 481 |
| Bpu10I | CCTNAGC | 5 cut(s) | 606, 671, 865, 1420, 1468 |
| BpuEI | CTTGAG | 2 cut(s) | 290, 541 |
| BpuMI | CCSGG | 3 cut(s) | 1237, 1446, 1447 |
| BsaBI | GATNNNNATC | 1 cut(s) | 969 |
| BsaJI | CCNNGG | 6 cut(s) | 296, 685, 832, 943, 1445, 1446 |
| BsaWI | WCCGGW | 2 cut(s) | 812, 1202 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 365, 395, 553, 583, 1613, 1643 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 922, 928 |
| Bse118I | RCCGGY | 1 cut(s) | 404 |
| Bse1I | ACTGG | 5 cut(s) | 606, 630, 685, 753, 1546 |
| Bse3DI | GCAATG | 1 cut(s) | 1816 |
| Bse8I | GATNNNNATC | 1 cut(s) | 969 |
| BseBI | CCWGG | 4 cut(s) | 153, 833, 923, 944 |
| BseDI | CCNNGG | 6 cut(s) | 296, 685, 832, 943, 1445, 1446 |
| BseGI | GGATG | 2 cut(s) | 622, 1550 |
| BseJI | GATNNNNATC | 1 cut(s) | 969 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 922, 928 |
| BseMI | GCAATG | 1 cut(s) | 1816 |
| BseMII | CTCAG | 6 cut(s) | 143, 620, 685, 879, 1038, 1434 |
| BseNI | ACTGG | 5 cut(s) | 606, 630, 685, 753, 1546 |
| BseRI | GAGGAG | 4 cut(s) | 1405, 1408, 1634, 1857 |
| BseSI | GKGCMC | 2 cut(s) | 353, 713 |
| BsgI | GTGCAG | 2 cut(s) | 503, 840 |
| Bsh1285I | CGRYCG | 1 cut(s) | 24 |
| BshFI | GGCC | 6 cut(s) | 500, 587, 684, 711, 948, 1444 |
| BsiEI | CGRYCG | 1 cut(s) | 24 |
| BsiHKAI | GWGCWC | 5 cut(s) | 391, 467, 641, 1758, 1793 |
| BsiHKCI | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| BsiSI | CCGG | 6 cut(s) | 405, 813, 1170, 1203, 1236, 1446 |
| BslFI | GGGAC | 2 cut(s) | 578, 1703 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 922, 928 |
| BsmAI | GTCTC | 2 cut(s) | 1616, 1652 |
| BsmFI | GGGAC | 2 cut(s) | 578, 1703 |
| BsnI | GGCC | 6 cut(s) | 500, 587, 684, 711, 948, 1444 |
| BsoBI | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| Bsp120I | GGGCCC | 1 cut(s) | 709 |
| Bsp143I | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| BspACI | CCGC | 9 cut(s) | 29, 92, 626, 788, 888, 1164, 1218, 1329, 1728 |
| BspANI | GGCC | 6 cut(s) | 500, 587, 684, 711, 948, 1444 |
| BspCNI | CTCAG | 6 cut(s) | 142, 619, 684, 878, 1037, 1433 |
| BspLI | GGNNCC | 4 cut(s) | 711, 1033, 1360, 1458 |
| BspMAI | CTGCAG | 1 cut(s) | 115 |
| BspMI | ACCTGC | 2 cut(s) | 300, 1518 |
| BspPI | GGATC | 1 cut(s) | 933 |
| BspTI | CTTAAG | 1 cut(s) | 772 |
| BsrBI | CCGCTC | 1 cut(s) | 1728 |
| BsrDI | GCAATG | 1 cut(s) | 1816 |
| BsrFI | RCCGGY | 1 cut(s) | 404 |
| BsrI | ACTGG | 5 cut(s) | 606, 630, 685, 753, 1546 |
| BssAI | RCCGGY | 1 cut(s) | 404 |
| BssECI | CCNNGG | 6 cut(s) | 296, 685, 832, 943, 1445, 1446 |
| BssMI | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| BssT1I | CCWWGG | 1 cut(s) | 296 |
| Bst2UI | CCWGG | 4 cut(s) | 153, 833, 923, 944 |
| Bst4CI | ACNGT | 6 cut(s) | 542, 569, 746, 861, 1097, 1646 |
| Bst6I | CTCTTC | 3 cut(s) | 274, 557, 1202 |
| BstAFI | CTTAAG | 1 cut(s) | 772 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 1 cut(s) | 799 |
| BstDEI | CTNAG | 8 cut(s) | 129, 507, 606, 671, 865, 1024, 1420, 1468 |
| BstEII | GGTNACC | 1 cut(s) | 395 |
| BstF5I | GGATG | 2 cut(s) | 622, 1550 |
| BstH2I | RGCGCY | 4 cut(s) | 475, 804, 1454, 1823 |
| BstHHI | GCGC | 5 cut(s) | 474, 803, 1315, 1453, 1822 |
| BstKTI | GATC | 7 cut(s) | 55, 826, 895, 928, 1225, 1492, 1751 |
| BstMAI | GTCTC | 2 cut(s) | 1616, 1652 |
| BstMBI | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| BstMCI | CGRYCG | 1 cut(s) | 24 |
| BstNI | CCWGG | 4 cut(s) | 153, 833, 923, 944 |
| BstNSI | RCATGY | 3 cut(s) | 366, 1321, 1480 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 744 |
| BstPI | GGTNACC | 1 cut(s) | 395 |
| BstSCI | CCNGG | 7 cut(s) | 151, 831, 921, 942, 1235, 1444, 1445 |
| BstSFI | CTRYAG | 3 cut(s) | 111, 266, 1252 |
| BstSLI | GKGCMC | 2 cut(s) | 353, 713 |
| BstV2I | GAAGAC | 2 cut(s) | 3, 320 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1838 |
| BsuI | GTATCC | 1 cut(s) | 1233 |
| BsuRI | GGCC | 6 cut(s) | 500, 587, 684, 711, 948, 1444 |
| BtgZI | GCGATG | 1 cut(s) | 609 |
| BtsCI | GGATG | 2 cut(s) | 622, 1550 |
| BtsI | GCAGTG | 4 cut(s) | 1183, 1331, 1383, 1425 |
| BtsIMutI | CAGTG | 7 cut(s) | 599, 678, 1102, 1183, 1331, 1383, 1425 |
| BveI | ACCTGC | 2 cut(s) | 300, 1518 |
| Cac8I | GCNNGC | 1 cut(s) | 799 |
| CaiI | CAGNNNCTG | 3 cut(s) | 119, 764, 1427 |
| CfoI | GCGC | 5 cut(s) | 474, 803, 1315, 1453, 1822 |
| Cfr10I | RCCGGY | 1 cut(s) | 404 |
| Cfr13I | GGNCC | 8 cut(s) | 499, 585, 709, 710, 810, 946, 1443, 1498 |
| Cfr9I | CCCGGG | 1 cut(s) | 1445 |
| CpoI | CGGWCCG | 1 cut(s) | 810 |
| CseI | GACGC | 2 cut(s) | 355, 1557 |
| Csp6I | GTAC | 1 cut(s) | 756 |
| CspI | CGGWCCG | 1 cut(s) | 810 |
| CviAII | CATG | 9 cut(s) | 363, 917, 952, 1301, 1318, 1477, 1723, 1775, 1786 |
| CviQI | GTAC | 1 cut(s) | 756 |
| DdeI | CTNAG | 8 cut(s) | 129, 507, 606, 671, 865, 1024, 1420, 1468 |
| DpnI | GATC | 7 cut(s) | 54, 825, 894, 927, 1224, 1491, 1750 |
| DpnII | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| DraIII | CACNNNGTG | 1 cut(s) | 1213 |
| Eam1104I | CTCTTC | 3 cut(s) | 274, 557, 1202 |
| EarI | CTCTTC | 3 cut(s) | 274, 557, 1202 |
| EciI | GGCGGA | 1 cut(s) | 615 |
| Ecl136II | GAGCTC | 2 cut(s) | 389, 1791 |
| Eco130I | CCWWGG | 1 cut(s) | 296 |
| Eco24I | GRGCYC | 6 cut(s) | 360, 391, 713, 839, 1361, 1793 |
| Eco47I | GGWCC | 2 cut(s) | 810, 1498 |
| Eco47III | AGCGCT | 1 cut(s) | 473 |
| Eco53kI | GAGCTC | 2 cut(s) | 389, 1791 |
| Eco88I | CYCGRG | 4 cut(s) | 353, 384, 1445, 1649 |
| Eco91I | GGTNACC | 1 cut(s) | 395 |
| EcoICRI | GAGCTC | 2 cut(s) | 389, 1791 |
| EcoO109I | RGGNCCY | 2 cut(s) | 585, 946 |
| EcoO65I | GGTNACC | 1 cut(s) | 395 |
| EcoRII | CCWGG | 4 cut(s) | 151, 831, 921, 942 |
| EcoT14I | CCWWGG | 1 cut(s) | 296 |
| EcoT22I | ATGCAT | 1 cut(s) | 1306 |
| EcoT38I | GRGCYC | 6 cut(s) | 360, 391, 713, 839, 1361, 1793 |
| ErhI | CCWWGG | 1 cut(s) | 296 |
| FaeI | CATG | 9 cut(s) | 366, 920, 955, 1304, 1321, 1480, 1726, 1778, 1789 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1819, 1851 |
| FaqI | GGGAC | 2 cut(s) | 578, 1703 |
| FatI | CATG | 9 cut(s) | 362, 916, 951, 1300, 1317, 1476, 1722, 1774, 1785 |
| FauI | CCCGC | 1 cut(s) | 781 |
| FauNDI | CATATG | 1 cut(s) | 224 |
| FbaI | TGATCA | 3 cut(s) | 892, 1222, 1489 |
| FblI | GTMKAC | 1 cut(s) | 342 |
| FokI | GGATG | 2 cut(s) | 609, 1537 |
| FriOI | GRGCYC | 6 cut(s) | 360, 391, 713, 839, 1361, 1793 |
| FspBI | CTAG | 2 cut(s) | 426, 522 |
| GlaI | GCGC | 5 cut(s) | 473, 802, 1314, 1452, 1821 |
| HaeII | RGCGCY | 4 cut(s) | 475, 804, 1454, 1823 |
| HaeIII | GGCC | 6 cut(s) | 500, 587, 684, 711, 948, 1444 |
| HapII | CCGG | 6 cut(s) | 405, 813, 1170, 1203, 1236, 1446 |
| HgaI | GACGC | 2 cut(s) | 355, 1557 |
| HhaI | GCGC | 5 cut(s) | 474, 803, 1315, 1453, 1822 |
| Hin1II | CATG | 9 cut(s) | 366, 920, 955, 1304, 1321, 1480, 1726, 1778, 1789 |
| Hin6I | GCGC | 5 cut(s) | 472, 801, 1313, 1451, 1820 |
| HinP1I | GCGC | 5 cut(s) | 472, 801, 1313, 1451, 1820 |
| HincII | GTYRAC | 1 cut(s) | 1683 |
| HindII | GTYRAC | 1 cut(s) | 1683 |
| HinfI | GANTC | 1 cut(s) | 1799 |
| HpaI | GTTAAC | 1 cut(s) | 1683 |
| HpaII | CCGG | 6 cut(s) | 405, 813, 1170, 1203, 1236, 1446 |
| HphI | GGTGA | 5 cut(s) | 394, 407, 1232, 1666, 1726 |
| Hpy166II | GTNNAC | 7 cut(s) | 105, 343, 370, 900, 1187, 1683, 1766 |
| Hpy188III | TCNNGA | 7 cut(s) | 167, 384, 426, 608, 880, 929, 1127 |
| Hpy8I | GTNNAC | 7 cut(s) | 105, 343, 370, 900, 1187, 1683, 1766 |
| Hpy99I | CGWCG | 2 cut(s) | 22, 1573 |
| HpyAV | CCTTC | 5 cut(s) | 490, 598, 1175, 1254, 1470 |
| HpyCH4III | ACNGT | 6 cut(s) | 542, 569, 746, 861, 1097, 1646 |
| HpyF3I | CTNAG | 8 cut(s) | 129, 507, 606, 671, 865, 1024, 1420, 1468 |
| Hsp92II | CATG | 9 cut(s) | 366, 920, 955, 1304, 1321, 1480, 1726, 1778, 1789 |
| HspAI | GCGC | 5 cut(s) | 472, 801, 1313, 1451, 1820 |
| Ksp22I | TGATCA | 3 cut(s) | 892, 1222, 1489 |
| KspAI | GTTAAC | 1 cut(s) | 1683 |
| Kzo9I | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| LmnI | GCTCC | 9 cut(s) | 127, 256, 276, 470, 1031, 1238, 1364, 1401, 1418 |
| LweI | GCATC | 6 cut(s) | 417, 586, 631, 878, 1313, 1576 |
| MaeI | CTAG | 2 cut(s) | 426, 522 |
| MaeIII | GTNAC | 3 cut(s) | 395, 536, 1205 |
| MalI | GATC | 7 cut(s) | 54, 825, 894, 927, 1224, 1491, 1750 |
| MbiI | CCGCTC | 1 cut(s) | 1728 |
| MboI | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| MluCI | AATT | 8 cut(s) | 39, 720, 818, 956, 1111, 1119, 1366, 1852 |
| MmeI | TCCRAC | 2 cut(s) | 1086, 1684 |
| Mph1103I | ATGCAT | 1 cut(s) | 1306 |
| MseI | TTAA | 4 cut(s) | 773, 1272, 1611, 1682 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1761 |
| MspA1I | CMGCKG | 6 cut(s) | 110, 119, 761, 854, 890, 1166 |
| MspCI | CTTAAG | 1 cut(s) | 772 |
| MspI | CCGG | 6 cut(s) | 405, 813, 1170, 1203, 1236, 1446 |
| MspR9I | CCNGG | 7 cut(s) | 153, 833, 923, 944, 1237, 1446, 1447 |
| MvaI | CCWGG | 4 cut(s) | 153, 833, 923, 944 |
| NciI | CCSGG | 3 cut(s) | 1237, 1446, 1447 |
| NdeI | CATATG | 1 cut(s) | 224 |
| NdeII | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| NlaIII | CATG | 9 cut(s) | 366, 920, 955, 1304, 1321, 1480, 1726, 1778, 1789 |
| NlaIV | GGNNCC | 4 cut(s) | 711, 1033, 1360, 1458 |
| NmeAIII | GCCGAG | 1 cut(s) | 666 |
| NmuCI | GTSAC | 3 cut(s) | 395, 536, 1205 |
| NsiI | ATGCAT | 1 cut(s) | 1306 |
| NspI | RCATGY | 3 cut(s) | 366, 1321, 1480 |
| OliI | CACNNNNGTG | 1 cut(s) | 1761 |
| PaqCI | CACCTGC | 1 cut(s) | 1518 |
| PciI | ACATGT | 1 cut(s) | 1317 |
| PfeI | GAWTC | 1 cut(s) | 1799 |
| PfoI | TCCNGGA | 1 cut(s) | 1235 |
| PscI | ACATGT | 1 cut(s) | 1317 |
| PshAI | GACNNNNGTC | 1 cut(s) | 744 |
| PshBI | ATTAAT | 2 cut(s) | 1272, 1611 |
| Psp124BI | GAGCTC | 2 cut(s) | 391, 1793 |
| Psp6I | CCWGG | 4 cut(s) | 151, 831, 921, 942 |
| PspEI | GGTNACC | 1 cut(s) | 395 |
| PspGI | CCWGG | 4 cut(s) | 151, 831, 921, 942 |
| PspN4I | GGNNCC | 4 cut(s) | 711, 1033, 1360, 1458 |
| PspOMI | GGGCCC | 1 cut(s) | 709 |
| PspPI | GGNCC | 8 cut(s) | 499, 585, 709, 710, 810, 946, 1443, 1498 |
| PstI | CTGCAG | 1 cut(s) | 115 |
| PstNI | CAGNNNCTG | 3 cut(s) | 119, 764, 1427 |
| PvuII | CAGCTG | 4 cut(s) | 110, 119, 761, 854 |
| RsaI | GTAC | 1 cut(s) | 757 |
| RsaNI | GTAC | 1 cut(s) | 756 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1761 |
| Rsr2I | CGGWCCG | 1 cut(s) | 810 |
| RsrII | CGGWCCG | 1 cut(s) | 810 |
| SacI | GAGCTC | 2 cut(s) | 391, 1793 |
| SaqAI | TTAA | 4 cut(s) | 773, 1272, 1611, 1682 |
| Sau3AI | GATC | 7 cut(s) | 52, 823, 892, 925, 1222, 1489, 1748 |
| Sau96I | GGNCC | 8 cut(s) | 499, 585, 709, 710, 810, 946, 1443, 1498 |
| ScrFI | CCNGG | 7 cut(s) | 153, 833, 923, 944, 1237, 1446, 1447 |
| SfaNI | GCATC | 6 cut(s) | 417, 586, 631, 878, 1313, 1576 |
| SfcI | CTRYAG | 3 cut(s) | 111, 266, 1252 |
| SinI | GGWCC | 2 cut(s) | 810, 1498 |
| SmaI | CCCGGG | 1 cut(s) | 1447 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1761 |
| SmlI | CTYRAG | 3 cut(s) | 305, 556, 772 |
| SmoI | CTYRAG | 3 cut(s) | 305, 556, 772 |
| Sse9I | AATT | 8 cut(s) | 39, 720, 818, 956, 1111, 1119, 1366, 1852 |
| SsiI | CCGC | 9 cut(s) | 29, 92, 626, 788, 888, 1164, 1218, 1329, 1728 |
| SspI | AATATT | 2 cut(s) | 1270, 1663 |
| SspMI | CTAG | 2 cut(s) | 426, 522 |
| SstI | GAGCTC | 2 cut(s) | 391, 1793 |
| StyD4I | CCNGG | 7 cut(s) | 151, 831, 921, 942, 1235, 1444, 1445 |
| StyI | CCWWGG | 1 cut(s) | 296 |
| TaaI | ACNGT | 6 cut(s) | 542, 569, 746, 861, 1097, 1646 |
| TaqI | TCGA | 2 cut(s) | 822, 847 |
| TaqII | GACCGA | 1 cut(s) | 10 |
| TasI | AATT | 8 cut(s) | 39, 720, 818, 956, 1111, 1119, 1366, 1852 |
| TatI | WGTACW | 1 cut(s) | 755 |
| TauI | GCSGC | 1 cut(s) | 890 |
| TfiI | GAWTC | 1 cut(s) | 1799 |
| Tru1I | TTAA | 4 cut(s) | 773, 1272, 1611, 1682 |
| Tru9I | TTAA | 4 cut(s) | 773, 1272, 1611, 1682 |
| TscAI | CASTG | 7 cut(s) | 606, 685, 1102, 1183, 1338, 1390, 1432 |
| TseFI | GTSAC | 3 cut(s) | 395, 536, 1205 |
| Tsp45I | GTSAC | 3 cut(s) | 395, 536, 1205 |
| TspDTI | ATGAA | 4 cut(s) | 83, 211, 971, 1538 |
| TspMI | CCCGGG | 1 cut(s) | 1445 |
| TspRI | CASTG | 7 cut(s) | 606, 685, 1102, 1183, 1338, 1390, 1432 |
| Vha464I | CTTAAG | 1 cut(s) | 772 |
| VpaK11BI | GGWCC | 2 cut(s) | 810, 1498 |
| VspI | ATTAAT | 2 cut(s) | 1272, 1611 |
| XapI | RAATTY | 2 cut(s) | 720, 1852 |
| XbaI | TCTAGA | 1 cut(s) | 425 |
| XceI | RCATGY | 3 cut(s) | 366, 1321, 1480 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 202 |
| XmaI | CCCGGG | 1 cut(s) | 1445 |
| XmiI | GTMKAC | 1 cut(s) | 342 |
| XspI | CTAG | 2 cut(s) | 426, 522 |
| Zsp2I | ATGCAT | 1 cut(s) | 1306 |