RLG00000005719

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0009753
Physical Location & Seq
Reverse (-)
1154135 .. 1157783
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005719

Sequence Viewer

Length: 1755 bp
ATGGCTGCATCTTCTTCTTCGCTTTTTGGAATTAGAGAAGAAGATCAAAACTTGATGAAGCCACAGCAGCATTCCAGCTCCACACCAACATCATCCACAGCCGCCGCGCCTCTGGCACCACCACCGCAGAAGAAGAAGAGAAACCAACCTGGAACACCAAATCCAGAAGCGGAAGTGATAGCACTATCTCCCAAGACGCTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAGCAGAAGACTACAAAAGAACCCAAACGCAAGGTCTACCTGTGCCCGGAGCCTACCTGCGTCCATCACGACCCGTCTCGGGCCCTCGGCGACCTCACCGGAATCAAGAAGCACTTCTCCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGCGCTACGCCGTTCAGTCTGATTGGAAGGCGCATTCTAAGACTTGCGGCACTCGGGAGTACCGCTGCGACTGTGGTACTCTCTTCTCCAGGAGGGACAGTTTTATCACTCATAGGGCCTTCTGTGATGCACTGGCTCAGGAAAGTGCAAGACATCAACCTAATCTGAGCAGCCTTGGCAGCAACTTATATGGAGGTACCAGCAACACTGGCCTAGCCTTATCTCATCATCACCATCAACAAGAAGTTGTGGGCCCTAACATTGATCATCATCACCACAACAATCAATCAACGGCTGCTGACATCTTACGACTCGGAGGCGGCAGCGGCAATGCCCGGACCGGACAGTTCGATCATCTCCTTTCTCCTCCTTCCATGGGGTCGTCTTTTCGTCCGGCCCAATCTTCGGCACCCTTCTTCATTAATCAAGACCAATCTAGCCAGCAATACCATCACGATCAAGAACAGTTGCAAAGCAAACAATTCCATGGACTGATGCAATTTTCTGATCATCAGAACAACAACTCTTCCTCAGGAGGCAATCTGTTTAACATACCTTTCTTATCAAACAGCAGCAATAGCAACAACAGCAACAACGCCGGTGGCGCCAATAGTCCTAATCTACTGCTTCATCCTAATCACCAGTACAACAGTAATGGTGGTGAAGGCGGGTCGAGTCTATTCTCAGGTCACATGATGGGTGGAGGTGGTGGTGATCACATGAGCTCCGGCAATGTCTCTTCGCTCTATAGTTCTCAAGTACAAAACAACCATCATGGTGCAGGTGCAGCCGTCTCGCACTTGTCCGCCACAGCGCTGCTTCAGAAGGCGGCTCAAATGGGGTCAACTACTTCGAGCAACAATACTTCTGCTTCGCTCCTAAGAAGCTTTGGAAGCACTTCCTCGACCAAATCTGAACGCCCCGCCGCGGCGGCCTCCCTTGTTCCTGCCAATTTAGGCGGCATTTTTGGTGGTGGCAGTGAAAATGAGAACAACCTCCAAGACCTAATGAACTCTTTTGCTGCTGGAGGGAGCTCCTCTATTTTCGGAACCGAGTCATTTGGCAGTGGATTTCATGACGTGGCAAGTAGGGACGACCCCAAGTTGCCGGCGGTGAGCATCGGAGCCGGGTCTGATAGGTTAACTAGGGATTTTCTTGGTGTTGGTCAGATTGTTAGGAGTATGAGCGGTGGGCAACGACAAACTCAGATCGACCATATGAGCTCCTTGGATTCAGAGAGCAATGCTGCGCCGTCAACCCAATCTTTCGGGGGAGGTGGCAATTTTTAG

Protein Analysis

585

Amino Acids

62.42

Weight (kDa)

9.08

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 110 - 144 1.4e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 148 - 172 1.2e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 175 - 212 3e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1238
Acc36I ACCTGC 3 cut(s) 297, 368, 1238
Acc65I GGTACC 1 cut(s) 662
AccB1I GGYRCC 4 cut(s) 115, 662, 874, 1070
AccBSI CCGCTC 1 cut(s) 1653
AccI GTMKAC 1 cut(s) 339
AccII CGCG 2 cut(s) 107, 1394
AcuI CTGAAG 1 cut(s) 1271
AcyI GRCGYC 1 cut(s) 1071
AfaI GTAC 5 cut(s) 527, 544, 664, 1112, 1227
AfeI AGCGCT 2 cut(s) 470, 1281
AfiI CCNNNNNNNGG 5 cut(s) 349, 382, 842, 871, 1393
AjiI CACGTC 1 cut(s) 1546
AjnI CCWGG 2 cut(s) 148, 554
AloI GAACNNNNNNTCC 2 cut(s) 145, 177
AluBI AGCT 7 cut(s) 78, 268, 301, 1191, 1353, 1500, 1689
AluI AGCT 7 cut(s) 78, 268, 301, 1191, 1353, 1500, 1689
Alw21I GWGCWC 4 cut(s) 464, 1193, 1502, 1691
Alw26I GTCTC 3 cut(s) 384, 1207, 1264
Ama87I CYCGRG 2 cut(s) 381, 519
Aor51HI AGCGCT 2 cut(s) 470, 1281
AoxI GGCC 6 cut(s) 384, 582, 676, 718, 861, 1398
ApaI GGGCCC 2 cut(s) 388, 722
ArsI GACNNNNNNTTYG 2 cut(s) 321, 353
AseI ATTAAT 1 cut(s) 888
Asp700I GAANNNNTTC 2 cut(s) 416, 1363
Asp718I GGTACC 1 cut(s) 662
AspLEI GCGC 6 cut(s) 109, 471, 499, 1073, 1282, 1717
AspS9I GGNCC 7 cut(s) 384, 385, 582, 718, 719, 804, 862
AsuC2I CCSGG 3 cut(s) 350, 802, 1594
AsuHPI GGTGA 7 cut(s) 391, 689, 731, 1097, 1139, 1190, 1591
AvaI CYCGRG 2 cut(s) 381, 519
AvaII GGWCC 1 cut(s) 804
AxyI CCTNAGG 1 cut(s) 997
BaeGI GKGCMC 3 cut(s) 350, 388, 722
BanI GGYRCC 4 cut(s) 115, 662, 874, 1070
BanII GRGCYC 5 cut(s) 388, 722, 1193, 1502, 1691
BbsI GAAGAC 1 cut(s) 317
Bbv12I GWGCWC 4 cut(s) 464, 1193, 1502, 1691
BccI CCATC 5 cut(s) 375, 708, 924, 1156, 1245
BceAI ACGGC 5 cut(s) 448, 461, 774, 1241, 1702
BcgI CGANNNNNNTGC 2 cut(s) 1242, 1276
BciT130I CCWGG 2 cut(s) 150, 556
BclI TGATCA 3 cut(s) 730, 973, 1180
BcnI CCSGG 3 cut(s) 350, 802, 1594
BcoDI GTCTC 3 cut(s) 384, 1207, 1264
BfaI CTAG 3 cut(s) 680, 903, 1611
BfmI CTRYAG 2 cut(s) 263, 1213
BfoI RGCGCY 3 cut(s) 472, 1074, 1283
BfuAI ACCTGC 3 cut(s) 297, 368, 1238
BglI GCCNNNNNGGC 1 cut(s) 1397
Bme1390I CCNGG 5 cut(s) 150, 350, 556, 802, 1594
Bme18I GGWCC 1 cut(s) 804
BmeT110I CYCGRG 2 cut(s) 381, 519
BmgBI CACGTC 1 cut(s) 1546
BmgT120I GGNCC 7 cut(s) 384, 385, 582, 718, 719, 804, 862
BmrFI CCNGG 5 cut(s) 150, 350, 556, 802, 1594
BmsI GCATC 4 cut(s) 17, 583, 951, 1593
BpiI GAAGAC 1 cut(s) 317
BpmI CTGGAG 3 cut(s) 406, 538, 1512
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 1 cut(s) 1206
BpuMI CCSGG 3 cut(s) 350, 802, 1594
BsaBI GATNNNNATC 1 cut(s) 735
BsaHI GRCGYC 1 cut(s) 1071
BsaJI CCNNGG 7 cut(s) 293, 388, 640, 840, 952, 1392, 1692
BsaWI WCCGGW 2 cut(s) 401, 806
BsaXI ACNNNNNCTCC 6 cut(s) 446, 476, 550, 580, 1175, 1205
Bsc4I CCNNNNNNNGG 5 cut(s) 349, 382, 842, 871, 1393
Bse118I RCCGGY 2 cut(s) 1064, 1573
Bse1I ACTGG 3 cut(s) 603, 679, 1108
Bse21I CCTNAGG 1 cut(s) 997
Bse3DI GCAATG 3 cut(s) 802, 1204, 1714
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 2 cut(s) 150, 556
BseDI CCNNGG 7 cut(s) 293, 388, 640, 840, 952, 1392, 1692
BseGI GGATG 2 cut(s) 92, 1096
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 5 cut(s) 349, 382, 842, 871, 1393
BseMI GCAATG 3 cut(s) 802, 1204, 1714
BseMII CTCAG 5 cut(s) 617, 623, 1011, 1164, 1685
BseNI ACTGG 3 cut(s) 603, 679, 1108
BseRI GAGGAG 2 cut(s) 822, 1492
BseSI GKGCMC 3 cut(s) 350, 388, 722
BsgI GTGCAG 2 cut(s) 1266, 1272
Bsh1236I CGCG 2 cut(s) 107, 1394
BshFI GGCC 6 cut(s) 386, 584, 678, 720, 863, 1400
BshNI GGYRCC 4 cut(s) 115, 662, 874, 1070
BsiHKAI GWGCWC 4 cut(s) 464, 1193, 1502, 1691
BsiHKCI CYCGRG 2 cut(s) 381, 519
BsiSI CCGG 9 cut(s) 350, 402, 802, 807, 860, 1065, 1194, 1574, 1593
BslFI GGGAC 2 cut(s) 575, 1571
BslI CCNNNNNNNGG 5 cut(s) 349, 382, 842, 871, 1393
BsmAI GTCTC 3 cut(s) 384, 1207, 1264
BsmBI CGTCTC 2 cut(s) 384, 1264
BsmFI GGGAC 2 cut(s) 575, 1571
BsmI GAATGC 2 cut(s) 70, 499
BsnI GGCC 6 cut(s) 386, 584, 678, 720, 863, 1400
BsoBI CYCGRG 2 cut(s) 381, 519
Bsp120I GGGCCC 2 cut(s) 384, 718
Bsp1286I GDGCHC 7 cut(s) 350, 388, 464, 722, 1193, 1502, 1691
Bsp143I GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
Bsp19I CCATGG 2 cut(s) 840, 952
BspANI GGCC 6 cut(s) 386, 584, 678, 720, 863, 1400
BspCNI CTCAG 5 cut(s) 616, 624, 1010, 1163, 1684
BspFNI CGCG 2 cut(s) 107, 1394
BspHI TCATGA 1 cut(s) 1540
BspMI ACCTGC 3 cut(s) 297, 368, 1238
BspT107I GGYRCC 4 cut(s) 115, 662, 874, 1070
BsrBI CCGCTC 1 cut(s) 1653
BsrDI GCAATG 3 cut(s) 802, 1204, 1714
BsrFI RCCGGY 2 cut(s) 1064, 1573
BsrI ACTGG 3 cut(s) 603, 679, 1108
BssAI RCCGGY 2 cut(s) 1064, 1573
BssECI CCNNGG 7 cut(s) 293, 388, 640, 840, 952, 1392, 1692
BssMI GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
BssNI GRCGYC 1 cut(s) 1071
BssT1I CCWWGG 5 cut(s) 293, 640, 840, 952, 1692
Bst2UI CCWGG 2 cut(s) 150, 556
Bst4CI ACNGT 5 cut(s) 539, 566, 813, 933, 1118
Bst6I CTCTTC 5 cut(s) 131, 271, 554, 997, 1210
BstACI GRCGYC 1 cut(s) 1071
BstC8I GCNNGC 2 cut(s) 908, 1575
BstDEI CTNAG 7 cut(s) 504, 603, 632, 997, 1150, 1346, 1671
BstDSI CCRYGG 3 cut(s) 840, 952, 1392
BstF5I GGATG 2 cut(s) 92, 1096
BstFNI CGCG 2 cut(s) 107, 1394
BstH2I RGCGCY 3 cut(s) 472, 1074, 1283
BstHHI GCGC 6 cut(s) 109, 471, 499, 1073, 1282, 1717
BstKTI GATC 7 cut(s) 46, 733, 820, 925, 976, 1183, 1677
BstMAI GTCTC 3 cut(s) 384, 1207, 1264
BstMBI GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
BstNI CCWGG 2 cut(s) 150, 556
BstSCI CCNGG 5 cut(s) 148, 348, 554, 800, 1592
BstSFI CTRYAG 2 cut(s) 263, 1213
BstSLI GKGCMC 3 cut(s) 350, 388, 722
BstUI CGCG 2 cut(s) 107, 1394
BstV2I GAAGAC 1 cut(s) 317
Bsu36I CCTNAGG 1 cut(s) 997
BsuRI GGCC 6 cut(s) 386, 584, 678, 720, 863, 1400
BtgI CCRYGG 3 cut(s) 840, 952, 1392
BtrI CACGTC 1 cut(s) 1546
BtsCI GGATG 2 cut(s) 92, 1096
BtsI GCAGTG 2 cut(s) 1450, 1537
BtsIMutI CAGTG 4 cut(s) 596, 672, 1450, 1537
BveI ACCTGC 3 cut(s) 297, 368, 1238
Cac8I GCNNGC 2 cut(s) 908, 1575
CciI TCATGA 1 cut(s) 1540
CfoI GCGC 6 cut(s) 109, 471, 499, 1073, 1282, 1717
Cfr10I RCCGGY 2 cut(s) 1064, 1573
Cfr13I GGNCC 7 cut(s) 384, 385, 582, 718, 719, 804, 862
Cfr42I CCGCGG 1 cut(s) 1395
CpoI CGGWCCG 1 cut(s) 804
CseI GACGC 2 cut(s) 205, 352
Csp6I GTAC 5 cut(s) 526, 543, 663, 1111, 1226
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CspI CGGWCCG 1 cut(s) 804
CviAII CATG 6 cut(s) 841, 953, 1159, 1186, 1241, 1541
CviQI GTAC 5 cut(s) 526, 543, 663, 1111, 1226
DdeI CTNAG 7 cut(s) 504, 603, 632, 997, 1150, 1346, 1671
DinI GGCGCC 1 cut(s) 1072
DpnI GATC 7 cut(s) 45, 732, 819, 924, 975, 1182, 1676
DpnII GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
Eam1104I CTCTTC 5 cut(s) 131, 271, 554, 997, 1210
EarI CTCTTC 5 cut(s) 131, 271, 554, 997, 1210
EciI GGCGGA 1 cut(s) 1261
Ecl136II GAGCTC 3 cut(s) 1191, 1500, 1689
Eco130I CCWWGG 5 cut(s) 293, 640, 840, 952, 1692
Eco24I GRGCYC 5 cut(s) 388, 722, 1193, 1502, 1691
Eco47I GGWCC 1 cut(s) 804
Eco47III AGCGCT 2 cut(s) 470, 1281
Eco53kI GAGCTC 3 cut(s) 1191, 1500, 1689
Eco57I CTGAAG 1 cut(s) 1271
Eco81I CCTNAGG 1 cut(s) 997
Eco88I CYCGRG 2 cut(s) 381, 519
EcoICRI GAGCTC 3 cut(s) 1191, 1500, 1689
EcoO109I RGGNCCY 3 cut(s) 385, 582, 719
EcoRII CCWGG 2 cut(s) 148, 554
EcoT14I CCWWGG 5 cut(s) 293, 640, 840, 952, 1692
EcoT38I GRGCYC 5 cut(s) 388, 722, 1193, 1502, 1691
EgeI GGCGCC 1 cut(s) 1072
EheI GGCGCC 1 cut(s) 1072
ErhI CCWWGG 5 cut(s) 293, 640, 840, 952, 1692
Esp3I CGTCTC 2 cut(s) 384, 1264
FaeI CATG 6 cut(s) 844, 956, 1162, 1189, 1244, 1544
FalI AAGNNNNNCTT 2 cut(s) 401, 433
FaqI GGGAC 2 cut(s) 575, 1571
FatI CATG 6 cut(s) 840, 952, 1158, 1185, 1240, 1540
FauI CCCGC 2 cut(s) 1127, 1396
FauNDI CATATG 2 cut(s) 221, 1683
FbaI TGATCA 3 cut(s) 730, 973, 1180
FblI GTMKAC 1 cut(s) 339
FokI GGATG 2 cut(s) 79, 1083
FriOI GRGCYC 5 cut(s) 388, 722, 1193, 1502, 1691
FspBI CTAG 3 cut(s) 680, 903, 1611
GlaI GCGC 6 cut(s) 108, 470, 498, 1072, 1281, 1716
GsuI CTGGAG 3 cut(s) 406, 538, 1512
HaeII RGCGCY 3 cut(s) 472, 1074, 1283
HaeIII GGCC 6 cut(s) 386, 584, 678, 720, 863, 1400
HapII CCGG 9 cut(s) 350, 402, 802, 807, 860, 1065, 1194, 1574, 1593
HgaI GACGC 2 cut(s) 205, 352
HhaI GCGC 6 cut(s) 109, 471, 499, 1073, 1282, 1717
Hin1I GRCGYC 1 cut(s) 1071
Hin1II CATG 6 cut(s) 844, 956, 1162, 1189, 1244, 1544
Hin6I GCGC 6 cut(s) 107, 469, 497, 1071, 1280, 1715
HinP1I GCGC 6 cut(s) 107, 469, 497, 1071, 1280, 1715
HincII GTYRAC 3 cut(s) 1311, 1608, 1722
HindII GTYRAC 3 cut(s) 1311, 1608, 1722
HindIII AAGCTT 1 cut(s) 1351
HinfI GANTC 5 cut(s) 405, 777, 1141, 1520, 1697
HpaI GTTAAC 1 cut(s) 1608
HpaII CCGG 9 cut(s) 350, 402, 802, 807, 860, 1065, 1194, 1574, 1593
HphI GGTGA 7 cut(s) 391, 689, 731, 1097, 1139, 1190, 1591
Hpy166II GTNNAC 4 cut(s) 340, 1311, 1608, 1722
Hpy8I GTNNAC 4 cut(s) 340, 1311, 1608, 1722
HpyAV CCTTC 6 cut(s) 487, 595, 846, 889, 1124, 1285
HpyCH4III ACNGT 5 cut(s) 539, 566, 813, 933, 1118
HpyCH4IV ACGT 1 cut(s) 1545
HpyCH4V TGCA 8 cut(s) 8, 234, 596, 614, 937, 964, 1247, 1253
HpyF3I CTNAG 7 cut(s) 504, 603, 632, 997, 1150, 1346, 1671
HpySE526I ACGT 1 cut(s) 1545
Hsp92I GRCGYC 1 cut(s) 1071
Hsp92II CATG 6 cut(s) 844, 956, 1162, 1189, 1244, 1544
HspAI GCGC 6 cut(s) 107, 469, 497, 1071, 1280, 1715
KasI GGCGCC 1 cut(s) 1070
KpnI GGTACC 1 cut(s) 666
KroI GCCGGC 1 cut(s) 1573
KroNI GCCGGC 1 cut(s) 1575
Ksp22I TGATCA 3 cut(s) 730, 973, 1180
KspAI GTTAAC 1 cut(s) 1608
KspI CCGCGG 1 cut(s) 1395
Kzo9I GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
LweI GCATC 4 cut(s) 17, 583, 951, 1593
MaeI CTAG 3 cut(s) 680, 903, 1611
MaeII ACGT 1 cut(s) 1545
MaeIII GTNAC 1 cut(s) 1154
MalI GATC 7 cut(s) 45, 732, 819, 924, 975, 1182, 1676
MbiI CCGCTC 1 cut(s) 1653
MboI GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
MhlI GDGCHC 7 cut(s) 350, 388, 464, 722, 1193, 1502, 1691
MluCI AATT 5 cut(s) 30, 947, 965, 1417, 1747
Mly113I GGCGCC 1 cut(s) 1071
MlyI GAGTC 3 cut(s) 771, 1150, 1529
MroNI GCCGGC 1 cut(s) 1573
MroXI GAANNNNTTC 2 cut(s) 416, 1363
MseI TTAA 3 cut(s) 888, 1014, 1607
MslI CAYNNNNRTG 1 cut(s) 1242
MspA1I CMGCKG 3 cut(s) 531, 792, 1394
MspI CCGG 9 cut(s) 350, 402, 802, 807, 860, 1065, 1194, 1574, 1593
MspR9I CCNGG 5 cut(s) 150, 350, 556, 802, 1594
Mva1269I GAATGC 2 cut(s) 70, 499
MvaI CCWGG 2 cut(s) 150, 556
MvnI CGCG 2 cut(s) 107, 1394
NaeI GCCGGC 1 cut(s) 1575
NarI GGCGCC 1 cut(s) 1071
NciI CCSGG 3 cut(s) 350, 802, 1594
NcoI CCATGG 2 cut(s) 840, 952
NdeI CATATG 2 cut(s) 221, 1683
NdeII GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
NgoMIV GCCGGC 1 cut(s) 1573
NlaIII CATG 6 cut(s) 844, 956, 1162, 1189, 1244, 1544
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 1 cut(s) 1154
PagI TCATGA 1 cut(s) 1540
PaqCI CACCTGC 1 cut(s) 1238
PctI GAATGC 2 cut(s) 70, 499
PdiI GCCGGC 1 cut(s) 1575
PdmI GAANNNNTTC 2 cut(s) 416, 1363
PfeI GAWTC 2 cut(s) 405, 1697
PfoI TCCNGGA 1 cut(s) 554
PleI GAGTC 3 cut(s) 771, 1149, 1528
PluTI GGCGCC 1 cut(s) 1074
PpsI GAGTC 3 cut(s) 771, 1149, 1528
PshBI ATTAAT 1 cut(s) 888
Psp124BI GAGCTC 3 cut(s) 1193, 1502, 1691
Psp6I CCWGG 2 cut(s) 148, 554
PspGI CCWGG 2 cut(s) 148, 554
PspOMI GGGCCC 2 cut(s) 384, 718
PspPI GGNCC 7 cut(s) 384, 385, 582, 718, 719, 804, 862
RsaI GTAC 5 cut(s) 527, 544, 664, 1112, 1227
RsaNI GTAC 5 cut(s) 526, 543, 663, 1111, 1226
RseI CAYNNNNRTG 1 cut(s) 1242
Rsr2I CGGWCCG 1 cut(s) 804
RsrII CGGWCCG 1 cut(s) 804
SacI GAGCTC 3 cut(s) 1193, 1502, 1691
SacII CCGCGG 1 cut(s) 1395
SaqAI TTAA 3 cut(s) 888, 1014, 1607
Sau3AI GATC 7 cut(s) 43, 730, 817, 922, 973, 1180, 1674
Sau96I GGNCC 7 cut(s) 384, 385, 582, 718, 719, 804, 862
SchI GAGTC 3 cut(s) 771, 1150, 1529
ScrFI CCNGG 5 cut(s) 150, 350, 556, 802, 1594
SduI GDGCHC 7 cut(s) 350, 388, 464, 722, 1193, 1502, 1691
SfaNI GCATC 4 cut(s) 17, 583, 951, 1593
SfcI CTRYAG 2 cut(s) 263, 1213
SfoI GGCGCC 1 cut(s) 1072
Sfr303I CCGCGG 1 cut(s) 1395
SgrAI CRCCGGYG 1 cut(s) 1064
SgrBI CCGCGG 1 cut(s) 1395
SinI GGWCC 1 cut(s) 804
SmiMI CAYNNNNRTG 1 cut(s) 1242
SmlI CTYRAG 1 cut(s) 1221
SmoI CTYRAG 1 cut(s) 1221
Sse9I AATT 5 cut(s) 30, 947, 965, 1417, 1747
SspDI GGCGCC 1 cut(s) 1070
SspMI CTAG 3 cut(s) 680, 903, 1611
SstI GAGCTC 3 cut(s) 1193, 1502, 1691
StyD4I CCNGG 5 cut(s) 148, 348, 554, 800, 1592
StyI CCWWGG 5 cut(s) 293, 640, 840, 952, 1692
TaaI ACNGT 5 cut(s) 539, 566, 813, 933, 1118
TaiI ACGT 1 cut(s) 1548
TaqI TCGA 5 cut(s) 816, 1139, 1319, 1370, 1677
TasI AATT 5 cut(s) 30, 947, 965, 1417, 1747
TatI WGTACW 2 cut(s) 1110, 1225
TfiI GAWTC 2 cut(s) 405, 1697
Tru1I TTAA 3 cut(s) 888, 1014, 1607
Tru9I TTAA 3 cut(s) 888, 1014, 1607
TscAI CASTG 4 cut(s) 603, 679, 1450, 1537
TseFI GTSAC 1 cut(s) 1154
Tsp45I GTSAC 1 cut(s) 1154
TspDTI ATGAA 6 cut(s) 71, 208, 874, 1085, 1490, 1529
TspRI CASTG 4 cut(s) 603, 679, 1450, 1537
VpaK11BI GGWCC 1 cut(s) 804
VspI ATTAAT 1 cut(s) 888
XcmI CCANNNNNNNNNTGG 1 cut(s) 199
XmiI GTMKAC 1 cut(s) 339
XmnI GAANNNNTTC 2 cut(s) 416, 1363
XspI CTAG 3 cut(s) 680, 903, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.