Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006174

Physical Location & Seq

Genomic Coordinates Reverse (-)

1921024 .. 1925268

Gene Structure 4245 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1026500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGATTAGGGCGCAGAGAGTTTTGGTGTTTTTAATAGCTTTTCTGGGGTTGCTTTTGAAGACTTCATCGGCGGAAGAGCAGCTTGTAAATCTGACCAGGCTGCAGATGTTTGTGGATGAACTTCCCAATATGCCCCTGCTCAAAGGCTTTGATGTTGTCAATAGTGTTCCCAAACCCAAGTCATTGAAGATTGGCATGTACATGAAAAAATGGAGATTCCACAGAGACCTTCCGCCGACGCCAGTGTTCGCCTACGGTACACGCAAGCGCACAGCGACAGTCCCTGGTCCAACAATCGAAGCCCTCCAGGGAATCGATACCTTCGTAACGTGGAGTAATTATCTCCCTTCAAAACACATTCTGCCTTGGGACCCAACCATTCCAACGGCCCTAGCCGTTACTAACAAGGGCGTTCCTACTGTGGTGCACCTCCACGGCGGCATCCATGAACCCGAAAGCGATGGAAGCGCAAATGCATGGTTCACTGCCGACTTCAAAGACCGCGGGCCCGCTTGGCCCAACCGAACATATCGCTACCGTAATCAGCAACATCCAGGGAACCTGTGGTACCATGATCACGCCATGGGGTTGACCAGAGTCAACCTCCTCGCTGGCTTGATTGGTGCCTACATTGTCCGTCATCCAGAAGTCGAGGGCCCACTTCGACTCCCGAGTGGCGAATTTGATCGAACGCTGGTCGTGTTCGATCGGAGCTTTCGCACTGACGGTTCGATATACATGAACCCTACTGGAAACAATCCCTCCATACACCCGCAATGGCAGCCGGAATATTTTGGTGACGCGATTATTGTGAACGGGAAGGCATGGCCGCAATTGAAGGTACGACGTCGTAAATACAGGTTCCGAATTATCAACGCCAGCAATGCGAGATTCTTCAAATTCTTCTTCACCAACGGTCTGAGATTTATCCACGTGGGGTCTGATTCGGCTTACCTTGGGAAACCGGTGGAGACCAAGGACTTTTTGATGGGGCCATCTGAGATCACAGACGTGGTGGTCGACTTTTCGAAGTCTAAGAATGCCAATGCAATCCTGGCCAATGGTGCACCGTATCCTTACCCATCGGGTGATCCCGTTAACAATGAGAACAGTAAGGTCATGCAGTTTTTGATTGCTGACCATTCAGAGGTAGACTCGTCGCGCGTTCCGTCAAGGTTAATTCAGTACCCCGTCCCTGATATATCGAGTTCATCGCGCACACGATACATCGCAATGTACGAGTACACGAGCGACATTGATGAGCCGACACATCTTTACTTGAACGGGAAATCGTACGAGGAACCGGCGACGGAGATTGCGAAAGCAGGGACCAGCGAGGTGTGGAACGTGATCAATCTGACGGAGGACAACCATCCCTTACACATTCACTTGGGACTGTTCGTAGTATTGGAACAGAAGGAGATGGTGAATGTGGAGGAGTTTACAGATTGCATGAATAAGCTAAACGACGCCGCAAAGTGCCAAATAAGCAAGTATGCACGCGGCAAAACTGTAGAGGTGCCAGCTCACGAGAAAGGGTGGAAGAACGTTTTCAAGATGAGAAACGGGACTGTGACAAAGATATTTTTGAGGTTTGCTTACATACACTCGAATGCATCGTATGAGTTCGATCCTACTGGGGAGCCTGGCTACGTGTACCATTGCCACATCTTGGATCATGAGGACAATGTGATGATGAGACCCTTAAAACTTGTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

574

Amino Acids

65.15

Weight (kDa)

8.75

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	138 - 215	7.4e-06	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 569	2e-09	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23010 AT1G71040
fragaria_vesca	FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270
malus_domestica	MD13G1026500.v1.1 MD13G1026600.v1.1 MD16G1029700.v1.1
prunus_persica	Prupe.1G323200_v2.0.a1 Prupe.1G323200_v2.0.a1
pyrus_communis	pycom13g02510 pycom13g02520
rosa_chinensis	RchiOBHm_Chr4g0441061
rosa_laevigata	RLG00000006123
rosa_multiflora	Rmu_sc0004609.1_g000002 Rmu_sc0006317.1_g000001 Rmu_sc0035661.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381980
rosa_rugosa	Rorug04G0330500
rosa_samantha	Rh4AG382200 Rh4BG395800 Rh4CG410900 Rh4DG388900
rosa_wichuraiana	Rw4G032980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1016
AatII	GACGTC	1 cut(s)	850
Acc65I	GGTACC	1 cut(s)	567
AccB1I	GGYRCC	3 cut(s)	567, 623, 1519
AccB7I	CCANNNNNTGG	1 cut(s)	1672
AccI	GTMKAC	2 cut(s)	1020, 1152
AccII	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
AclI	AACGTT	1 cut(s)	1548
AclWI	GGATC	3 cut(s)	1085, 1625, 1683
AcoI	YGGCCR	2 cut(s)	827, 1056
AcsI	RAATTY	2 cut(s)	680, 899
AcvI	CACGTG	1 cut(s)	934
AcyI	GRCGYC	3 cut(s)	239, 847, 1470
AfaI	GTAC	9 cut(s)	200, 259, 569, 843, 1187, 1238, 1244, 1295, 1658
AfiI	CCNNNNNNNGG	2 cut(s)	1147, 1672
AflIII	ACRYGT	1 cut(s)	1653
AgeI	ACCGGT	1 cut(s)	964
AgsI	TTSAA	8 cut(s)	58, 187, 351, 496, 838, 898, 1282, 1555
AjiI	CACGTC	1 cut(s)	1012
AjnI	CCWGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
AleI	CACNNNNGTG	1 cut(s)	1010
AluBI	AGCT	5 cut(s)	38, 82, 714, 1462, 1526
AluI	AGCT	5 cut(s)	38, 82, 714, 1462, 1526
Alw21I	GWGCWC	2 cut(s)	429, 1069
Alw26I	GTCTC	3 cut(s)	219, 965, 1693
Alw44I	GTGCAC	2 cut(s)	425, 1065
AlwI	GGATC	3 cut(s)	1085, 1625, 1683
AlwNI	CAGNNNCTG	1 cut(s)	284
Ama87I	CYCGRG	1 cut(s)	670
AoxI	GGCC	7 cut(s)	387, 506, 515, 655, 827, 992, 1056
ApaI	GGGCCC	2 cut(s)	510, 659
ApaLI	GTGCAC	2 cut(s)	425, 1065
ApeKI	GCWGC	3 cut(s)	79, 100, 781
ApoI	RAATTY	2 cut(s)	680, 899
AsiGI	ACCGGT	1 cut(s)	964
Asp700I	GAANNNNTTC	1 cut(s)	1550
Asp718I	GGTACC	1 cut(s)	567
AspLEI	GCGC	5 cut(s)	13, 270, 470, 1164, 1218
AsuHPI	GGTGA	4 cut(s)	809, 901, 1100, 1438
AsuII	TTCGAA	1 cut(s)	1028
AvaI	CYCGRG	1 cut(s)	670
AvaII	GGWCC	3 cut(s)	287, 370, 1329
BaeGI	GKGCMC	4 cut(s)	429, 510, 659, 1069
BaeI	ACNNNNGTAYC	2 cut(s)	309, 342
BalI	TGGCCA	1 cut(s)	1058
BanI	GGYRCC	3 cut(s)	567, 623, 1519
BanII	GRGCYC	2 cut(s)	510, 659
BauI	CACGAG	2 cut(s)	1246, 1529
BbrPI	CACGTG	1 cut(s)	934
BbsI	GAAGAC	1 cut(s)	65
Bbv12I	GWGCWC	2 cut(s)	429, 1069
BbvI	GCAGC	3 cut(s)	87, 91, 793
BccI	CCATC	6 cut(s)	455, 982, 1003, 1090, 1380, 1417
BceAI	ACGGC	3 cut(s)	380, 402, 451
BciT130I	CCWGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
BciVI	GTATCC	1 cut(s)	1083
BclI	TGATCA	2 cut(s)	574, 1350
BcoDI	GTCTC	3 cut(s)	219, 965, 1693
BfaI	CTAG	1 cut(s)	392
BfmI	CTRYAG	2 cut(s)	101, 1512
BfuI	GTATCC	1 cut(s)	1083
BglI	GCCNNNNNGGC	1 cut(s)	514
BisI	GCNGC	7 cut(s)	80, 101, 439, 782, 830, 1473, 1504
BlsI	GCNGC	7 cut(s)	81, 102, 440, 783, 831, 1474, 1505
Bme1390I	CCNGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
Bme18I	GGWCC	3 cut(s)	287, 370, 1329
BmeT110I	CYCGRG	1 cut(s)	670
BmgBI	CACGTC	1 cut(s)	1012
BmrFI	CCNGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
BmrI	ACTGGG	1 cut(s)	1647
BmsI	GCATC	2 cut(s)	450, 1625
BmuI	ACTGGG	1 cut(s)	1647
BoxI	GACNNNNGTC	1 cut(s)	596
BpiI	GAAGAC	1 cut(s)	65
BplI	GAGNNNNNCTC	4 cut(s)	588, 620, 1139, 1171
BpmI	CTGGAG	1 cut(s)	290
Bpu14I	TTCGAA	1 cut(s)	1028
Bsa29I	ATCGAT	1 cut(s)	315
BsaAI	YACGTR	2 cut(s)	934, 1654
BsaHI	GRCGYC	3 cut(s)	239, 847, 1470
BsaI	GGTCTC	3 cut(s)	219, 965, 1693
BsaJI	CCNNGG	9 cut(s)	283, 307, 365, 433, 502, 554, 582, 955, 975
BsaWI	WCCGGW	1 cut(s)	964
BsaXI	ACNNNNNCTCC	4 cut(s)	651, 681, 746, 776
Bsc4I	CCNNNNNNNGG	2 cut(s)	1147, 1672
Bse118I	RCCGGY	2 cut(s)	964, 1303
Bse1I	ACTGG	3 cut(s)	242, 754, 1642
Bse3DI	GCAATG	4 cut(s)	782, 889, 1239, 1660
BseBI	CCWGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	9 cut(s)	283, 307, 365, 433, 502, 554, 582, 955, 975
BseGI	GGATG	5 cut(s)	121, 441, 550, 640, 1372
BseLI	CCNNNNNNNGG	2 cut(s)	1147, 1672
BseMI	GCAATG	4 cut(s)	782, 889, 1239, 1660
BseMII	CTCAG	2 cut(s)	911, 990
BseNI	ACTGG	3 cut(s)	242, 754, 1642
BseRI	GAGGAG	2 cut(s)	596, 1451
BseSI	GKGCMC	4 cut(s)	429, 510, 659, 1069
BseXI	GCAGC	3 cut(s)	87, 91, 793
Bsh1236I	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
Bsh1285I	CGRYCG	1 cut(s)	709
BshFI	GGCC	7 cut(s)	389, 508, 517, 657, 829, 994, 1058
BshNI	GGYRCC	3 cut(s)	567, 623, 1519
BshTI	ACCGGT	1 cut(s)	964
BshVI	ATCGAT	1 cut(s)	315
BsiEI	CGRYCG	1 cut(s)	709
BsiHKAI	GWGCWC	2 cut(s)	429, 1069
BsiHKCI	CYCGRG	1 cut(s)	670
BsiSI	CCGG	3 cut(s)	785, 965, 1304
BsiWI	CGTACG	1 cut(s)	1293
BslFI	GGGAC	6 cut(s)	266, 383, 1178, 1342, 1407, 1582
BslI	CCNNNNNNNGG	2 cut(s)	1147, 1672
BsmAI	GTCTC	3 cut(s)	219, 965, 1693
BsmFI	GGGAC	6 cut(s)	266, 383, 1178, 1342, 1407, 1582
BsmI	GAATGC	2 cut(s)	1045, 1618
BsnI	GGCC	7 cut(s)	389, 508, 517, 657, 829, 994, 1058
Bso31I	GGTCTC	3 cut(s)	219, 965, 1693
BsoBI	CYCGRG	1 cut(s)	670
Bsp119I	TTCGAA	1 cut(s)	1028
Bsp120I	GGGCCC	2 cut(s)	506, 655
Bsp1286I	GDGCHC	4 cut(s)	429, 510, 659, 1069
Bsp1407I	TGTACA	1 cut(s)	198
Bsp143I	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
Bsp19I	CCATGG	1 cut(s)	582
BspANI	GGCC	7 cut(s)	389, 508, 517, 657, 829, 994, 1058
BspCNI	CTCAG	2 cut(s)	912, 991
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
BspHI	TCATGA	1 cut(s)	1678
BspMAI	CTGCAG	1 cut(s)	105
BspPI	GGATC	3 cut(s)	1085, 1625, 1683
BspQI	GCTCTTC	1 cut(s)	69
BspT104I	TTCGAA	1 cut(s)	1028
BspT107I	GGYRCC	3 cut(s)	567, 623, 1519
BspTNI	GGTCTC	3 cut(s)	219, 965, 1693
BsrDI	GCAATG	4 cut(s)	782, 889, 1239, 1660
BsrFI	RCCGGY	2 cut(s)	964, 1303
BsrGI	TGTACA	1 cut(s)	198
BsrI	ACTGG	3 cut(s)	242, 754, 1642
BssAI	RCCGGY	2 cut(s)	964, 1303
BssECI	CCNNGG	9 cut(s)	283, 307, 365, 433, 502, 554, 582, 955, 975
BssMI	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
BssNI	GRCGYC	3 cut(s)	239, 847, 1470
BssSI	CACGAG	2 cut(s)	1246, 1529
BssT1I	CCWWGG	4 cut(s)	365, 582, 955, 975
Bst2BI	CACGAG	2 cut(s)	1246, 1529
Bst2UI	CCWGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
Bst6I	CTCTTC	1 cut(s)	69
BstACI	GRCGYC	3 cut(s)	239, 847, 1470
BstAUI	TGTACA	1 cut(s)	198
BstBAI	YACGTR	2 cut(s)	934, 1654
BstBI	TTCGAA	1 cut(s)	1028
BstC8I	GCNNGC	7 cut(s)	266, 506, 510, 613, 880, 1501, 1524
BstDEI	CTNAG	3 cut(s)	920, 999, 1035
BstDSI	CCRYGG	3 cut(s)	433, 502, 582
BstF5I	GGATG	5 cut(s)	121, 441, 550, 640, 1372
BstFNI	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
BstHHI	GCGC	5 cut(s)	13, 270, 470, 1164, 1218
BstKTI	GATC	8 cut(s)	577, 688, 709, 1005, 1093, 1353, 1633, 1678
BstMAI	GTCTC	3 cut(s)	219, 965, 1693
BstMBI	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
BstMCI	CGRYCG	1 cut(s)	709
BstMWI	GCNNNNNNNGC	7 cut(s)	465, 514, 781, 884, 1055, 1064, 1488
BstNI	CCWGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
BstNSI	RCATGY	1 cut(s)	199
BstPAI	GACNNNNGTC	1 cut(s)	596
BstSCI	CCNGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
BstSFI	CTRYAG	2 cut(s)	101, 1512
BstSLI	GKGCMC	4 cut(s)	429, 510, 659, 1069
BstUI	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
BstV1I	GCAGC	3 cut(s)	87, 91, 793
BstV2I	GAAGAC	1 cut(s)	65
Bsu15I	ATCGAT	1 cut(s)	315
BsuI	GTATCC	1 cut(s)	1083
BsuRI	GGCC	7 cut(s)	389, 508, 517, 657, 829, 994, 1058
BsuTUI	ATCGAT	1 cut(s)	315
BtgI	CCRYGG	3 cut(s)	433, 502, 582
BtgZI	GCGATG	3 cut(s)	474, 1197, 1213
BtrI	CACGTC	1 cut(s)	1012
BtsCI	GGATG	5 cut(s)	121, 441, 550, 640, 1372
BtsI	GCAGTG	1 cut(s)	483
BtsIMutI	CAGTG	3 cut(s)	249, 483, 720
Cac8I	GCNNGC	7 cut(s)	266, 506, 510, 613, 880, 1501, 1524
CaiI	CAGNNNCTG	1 cut(s)	284
CciI	TCATGA	1 cut(s)	1678
CfoI	GCGC	5 cut(s)	13, 270, 470, 1164, 1218
Cfr10I	RCCGGY	2 cut(s)	964, 1303
Cfr42I	CCGCGG	1 cut(s)	505
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	3 cut(s)	247, 809, 1478
Csp6I	GTAC	9 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1294, 1657
CspAI	ACCGGT	1 cut(s)	964
CviQI	GTAC	9 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1294, 1657
DdeI	CTNAG	3 cut(s)	920, 999, 1035
DpnI	GATC	8 cut(s)	576, 687, 708, 1004, 1092, 1352, 1632, 1677
DpnII	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
DrdI	GACNNNNNNGTC	1 cut(s)	1016
DseDI	GACNNNNNNGTC	1 cut(s)	1016
EaeI	YGGCCR	2 cut(s)	827, 1056
Eam1104I	CTCTTC	1 cut(s)	69
EarI	CTCTTC	1 cut(s)	69
EciI	GGCGGA	2 cut(s)	86, 222
Eco130I	CCWWGG	4 cut(s)	365, 582, 955, 975
Eco24I	GRGCYC	2 cut(s)	510, 659
Eco31I	GGTCTC	3 cut(s)	219, 965, 1693
Eco47I	GGWCC	3 cut(s)	287, 370, 1329
Eco72I	CACGTG	1 cut(s)	934
Eco88I	CYCGRG	1 cut(s)	670
EcoO109I	RGGNCCY	2 cut(s)	370, 655
EcoRII	CCWGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
EcoT14I	CCWWGG	4 cut(s)	365, 582, 955, 975
EcoT22I	ATGCAT	2 cut(s)	478, 1618
EcoT38I	GRGCYC	2 cut(s)	510, 659
ErhI	CCWWGG	4 cut(s)	365, 582, 955, 975
FalI	AAGNNNNNCTT	2 cut(s)	66, 98
FaqI	GGGAC	6 cut(s)	266, 383, 1178, 1342, 1407, 1582
FauI	CCCGC	3 cut(s)	497, 517, 780
FbaI	TGATCA	2 cut(s)	574, 1350
FblI	GTMKAC	2 cut(s)	1020, 1152
Fnu4HI	GCNGC	7 cut(s)	80, 101, 439, 782, 830, 1473, 1504
FokI	GGATG	5 cut(s)	128, 428, 537, 627, 1359
FriOI	GRGCYC	2 cut(s)	510, 659
Fsp4HI	GCNGC	7 cut(s)	80, 101, 439, 782, 830, 1473, 1504
FspBI	CTAG	1 cut(s)	392
GlaI	GCGC	5 cut(s)	12, 269, 469, 1163, 1217
GluI	GCNGC	7 cut(s)	80, 101, 439, 782, 830, 1473, 1504
GsuI	CTGGAG	1 cut(s)	290
HaeIII	GGCC	7 cut(s)	389, 508, 517, 657, 829, 994, 1058
HapII	CCGG	3 cut(s)	785, 965, 1304
HgaI	GACGC	3 cut(s)	247, 809, 1478
HhaI	GCGC	5 cut(s)	13, 270, 470, 1164, 1218
Hin1I	GRCGYC	3 cut(s)	239, 847, 1470
Hin6I	GCGC	5 cut(s)	11, 268, 468, 1162, 1216
HinP1I	GCGC	5 cut(s)	11, 268, 468, 1162, 1216
HincII	GTYRAC	4 cut(s)	591, 601, 1021, 1099
HindII	GTYRAC	4 cut(s)	591, 601, 1021, 1099
HinfI	GANTC	7 cut(s)	216, 312, 597, 666, 891, 944, 1154
HpaI	GTTAAC	1 cut(s)	1099
HpaII	CCGG	3 cut(s)	785, 965, 1304
HphI	GGTGA	4 cut(s)	809, 901, 1100, 1438
Hpy188I	TCNGA	8 cut(s)	93, 711, 866, 921, 943, 1000, 1147, 1359
Hpy188III	TCNNGA	5 cut(s)	644, 670, 1529, 1555, 1679
Hpy99I	CGWCG	6 cut(s)	241, 849, 852, 1162, 1312, 1472
HpyAV	CCTTC	6 cut(s)	239, 331, 357, 814, 832, 1411
HpyCH4IV	ACGT	7 cut(s)	329, 847, 933, 1011, 1347, 1548, 1653
HpyCH4V	TGCA	9 cut(s)	103, 427, 476, 1049, 1067, 1123, 1452, 1499, 1616
HpyF10VI	GCNNNNNNNGC	7 cut(s)	465, 514, 781, 884, 1055, 1064, 1488
HpyF3I	CTNAG	3 cut(s)	920, 999, 1035
HpySE526I	ACGT	7 cut(s)	329, 847, 933, 1011, 1347, 1548, 1653
Hsp92I	GRCGYC	3 cut(s)	239, 847, 1470
HspAI	GCGC	5 cut(s)	11, 268, 468, 1162, 1216
KflI	GGGWCCC	1 cut(s)	370
KpnI	GGTACC	1 cut(s)	571
Ksp22I	TGATCA	2 cut(s)	574, 1350
KspAI	GTTAAC	1 cut(s)	1099
KspI	CCGCGG	1 cut(s)	505
Kzo9I	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
LguI	GCTCTTC	1 cut(s)	69
LmnI	GCTCC	2 cut(s)	711, 1642
Lsp1109I	GCAGC	3 cut(s)	87, 91, 793
LweI	GCATC	2 cut(s)	450, 1625
MaeI	CTAG	1 cut(s)	392
MaeII	ACGT	7 cut(s)	329, 847, 933, 1011, 1347, 1548, 1653
MaeIII	GTNAC	4 cut(s)	325, 397, 797, 1573
MalI	GATC	8 cut(s)	576, 687, 708, 1004, 1092, 1352, 1632, 1677
MboI	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
MboII	GAAGA	7 cut(s)	70, 86, 199, 886, 895, 898, 1555
MfeI	CAATTG	1 cut(s)	833
MhlI	GDGCHC	4 cut(s)	429, 510, 659, 1069
MlsI	TGGCCA	1 cut(s)	1058
MluCI	AATT	6 cut(s)	337, 680, 833, 867, 899, 1179
MluNI	TGGCCA	1 cut(s)	1058
MlyI	GAGTC	3 cut(s)	606, 660, 1148
MmeI	TCCRAC	2 cut(s)	314, 407
Mox20I	TGGCCA	1 cut(s)	1058
Mph1103I	ATGCAT	2 cut(s)	478, 1618
MroXI	GAANNNNTTC	1 cut(s)	1550
MscI	TGGCCA	1 cut(s)	1058
MseI	TTAA	4 cut(s)	32, 1098, 1178, 1706
MslI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
Msp20I	TGGCCA	1 cut(s)	1058
MspA1I	CMGCKG	1 cut(s)	504
MspI	CCGG	3 cut(s)	785, 965, 1304
MspR9I	CCNGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
MunI	CAATTG	1 cut(s)	833
Mva1269I	GAATGC	2 cut(s)	1045, 1618
MvaI	CCWGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
MvnI	CGCG	6 cut(s)	504, 803, 1162, 1164, 1216, 1503
MwoI	GCNNNNNNNGC	7 cut(s)	465, 514, 781, 884, 1055, 1064, 1488
NcoI	CCATGG	1 cut(s)	582
NdeII	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
NmuCI	GTSAC	2 cut(s)	797, 1573
NsiI	ATGCAT	2 cut(s)	478, 1618
NspI	RCATGY	1 cut(s)	199
NspV	TTCGAA	1 cut(s)	1028
OliI	CACNNNNGTG	1 cut(s)	1010
PagI	TCATGA	1 cut(s)	1678
PciSI	GCTCTTC	1 cut(s)	69
PcsI	WCGNNNNNNNCGW	6 cut(s)	321, 1017, 1166, 1236, 1316, 1616
PctI	GAATGC	2 cut(s)	1045, 1618
PdmI	GAANNNNTTC	1 cut(s)	1550
PfeI	GAWTC	4 cut(s)	216, 312, 891, 944
Pfl23II	CGTACG	1 cut(s)	1293
PflMI	CCANNNNNTGG	1 cut(s)	1672
PinAI	ACCGGT	1 cut(s)	964
PkrI	GCNGC	7 cut(s)	81, 102, 440, 783, 831, 1474, 1505
Ple19I	CGATCG	1 cut(s)	709
PleI	GAGTC	3 cut(s)	605, 660, 1148
PmaCI	CACGTG	1 cut(s)	934
PmlI	CACGTG	1 cut(s)	934
PpsI	GAGTC	3 cut(s)	605, 660, 1148
Ppu21I	YACGTR	2 cut(s)	934, 1654
PpuMI	RGGWCCY	1 cut(s)	370
PshAI	GACNNNNGTC	1 cut(s)	596
Psp1406I	AACGTT	1 cut(s)	1548
Psp5II	RGGWCCY	1 cut(s)	370
Psp6I	CCWGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
PspCI	CACGTG	1 cut(s)	934
PspGI	CCWGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
PspLI	CGTACG	1 cut(s)	1293
PspOMI	GGGCCC	2 cut(s)	506, 655
PspPPI	RGGWCCY	1 cut(s)	370
PsrI	GAACNNNNNNTAC	2 cut(s)	551, 583
PstI	CTGCAG	1 cut(s)	105
PstNI	CAGNNNCTG	1 cut(s)	284
PvuI	CGATCG	1 cut(s)	709
RsaI	GTAC	9 cut(s)	200, 259, 569, 843, 1187, 1238, 1244, 1295, 1658
RsaNI	GTAC	9 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1294, 1657
RseI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
SacII	CCGCGG	1 cut(s)	505
SalI	GTCGAC	1 cut(s)	1019
SapI	GCTCTTC	1 cut(s)	69
SaqAI	TTAA	4 cut(s)	32, 1098, 1178, 1706
SatI	GCNGC	7 cut(s)	80, 101, 439, 782, 830, 1473, 1504
Sau3AI	GATC	8 cut(s)	574, 685, 706, 1002, 1090, 1350, 1630, 1675
SchI	GAGTC	3 cut(s)	606, 660, 1148
ScrFI	CCNGG	6 cut(s)	97, 285, 308, 555, 1055, 1647
SduI	GDGCHC	4 cut(s)	429, 510, 659, 1069
SfaNI	GCATC	2 cut(s)	450, 1625
SfcI	CTRYAG	2 cut(s)	101, 1512
SfiI	GGCCNNNNNGGCC	1 cut(s)	514
Sfr303I	CCGCGG	1 cut(s)	505
SfuI	TTCGAA	1 cut(s)	1028
SgrBI	CCGCGG	1 cut(s)	505
SinI	GGWCC	3 cut(s)	287, 370, 1329
SmiMI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
Sse9I	AATT	6 cut(s)	337, 680, 833, 867, 899, 1179
SspI	AATATT	1 cut(s)	791
SspMI	CTAG	1 cut(s)	392
StyD4I	CCNGG	6 cut(s)	95, 283, 306, 553, 1053, 1645
StyI	CCWWGG	4 cut(s)	365, 582, 955, 975
TaiI	ACGT	7 cut(s)	332, 850, 936, 1014, 1350, 1551, 1656
TasI	AATT	6 cut(s)	337, 680, 833, 867, 899, 1179
TatI	WGTACW	2 cut(s)	198, 1242
TauI	GCSGC	4 cut(s)	441, 832, 1475, 1506
TfiI	GAWTC	4 cut(s)	216, 312, 891, 944
Tru1I	TTAA	4 cut(s)	32, 1098, 1178, 1706
Tru9I	TTAA	4 cut(s)	32, 1098, 1178, 1706
TscAI	CASTG	3 cut(s)	249, 490, 727
TseFI	GTSAC	2 cut(s)	797, 1573
TseI	GCWGC	3 cut(s)	79, 100, 781
Tsp45I	GTSAC	2 cut(s)	797, 1573
TspDTI	ATGAA	7 cut(s)	54, 132, 218, 462, 755, 1200, 1469
TspGWI	ACGGA	4 cut(s)	626, 1158, 1325, 1376
TspRI	CASTG	3 cut(s)	249, 490, 727
Van91I	CCANNNNNTGG	1 cut(s)	1672
VneI	GTGCAC	2 cut(s)	425, 1065
VpaK11BI	GGWCC	3 cut(s)	287, 370, 1329
XapI	RAATTY	2 cut(s)	680, 899
XceI	RCATGY	1 cut(s)	199
XcmI	CCANNNNNNNNNTGG	2 cut(s)	561, 1051
XmiI	GTMKAC	2 cut(s)	1020, 1152
XmnI	GAANNNNTTC	1 cut(s)	1550
XspI	CTAG	1 cut(s)	392
ZraI	GACGTC	1 cut(s)	848
Zsp2I	ATGCAT	2 cut(s)	478, 1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.