Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0006174

Physical Location & Seq

Genomic Coordinates Reverse (-)

2129435 .. 2132315

Gene Structure 2881 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1029700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGTTAGTGCTCATCAGAGAGTTTTGGTGTTATTAATATCTTTTATCGGGGTGCTTTTGGAGACTTCAAGGGCGGCAGAGCAGCTTGTAAATCTGACCAGGCTGCACATGTTTGTGGATGAACTTCCCGATATGCCTCTACTCAAAGGCTTTGATGTTGTAGATGGTGTTCCCAAACCCAAGTCATTAAAAATTGGCATGTACATGAAAAAATGGAGATTCCACAGAGACCTTCCGGCGACGCCAGTGTTCGCCTACGGTACACGTAAGCGCACAGCAACAGTGCCTGGTCCTACAATCGAAGCCCTCCAAGGAATCGATACTTTCGTGACGTGGCGTAATTACCTCCCCTCCAAACACATTCTGCCTTGGGATCCCACCATTCCAACGGCCCTACCCGCTACCAACAAGGGCGTTCCTACTGTGGTGCACCTCCACGGCGGCATCCATGAACCCGCAAGCGATGGTAGCGCAGAAGCATGGTTCACCGCCAAATTCAAAGCCCGTGGGCCCTCTTGGCCGAAGCGAAGATATCGCTACCGCAACCAGCAACAACCCGGGAACCTGTGGTACCATGATCACGCCATGGGCTTGACCAGAGTCAACCTCCTCGCTGGCTTGATTGGGGCCTACATTGTCCGTCAGCCGGAAGTCGAAGACCCGCTTCGACTCCCAAGCGGCGAATTTGATCGAACGCTAGTGGTGTTTGATCGTAGCTTTCGCACCGACGGTTCGATATACATGAACTCGACCGGAAACAATCCCTCCATACACCCGCAGTGGCAGCCGGAATATTTTGGTGACGCCATTATTGTGAATGGGAAGGCATGGCCGCAGTTGAAGGTACGACGTCGTAAATACAGGTTCCGAATTATCAACGCTAGCAATGCGAGGTTCTTCAGATTCTTCTTCGCCAACGGTTTGAGATTCATCCACGTGGGGGCTGATTCGGCGTACCTTGGGAAACCGGTGGGGACCAAGGACATTTTGCTGGCGCCTTCTGAGATCGCTGACGTGGTGGTTGACTTTTCGAAGTCCAAGAATGCCAACGCTATCCTAGCCAATGATGCACCGTATCCTTACCCGTCGGGTGATCCCGTTAACACTGCTAACAGTAAGGTCATGCAGTTTGTGATTGTTGACCATTCAGAGCTGGACACGTCGCACGTTCCAGCGAGGTTAATTCAGTACCCCGTTCCTGATTTATTGAGTGCATCGCGCACACGATACATCGCAATGTATGAGTACACGAGTGACGCTGATGAGCCGACACATCTTTATTTGAACGGGAAATCTTATGAGGCACCGGCAACGGAGATCGCGAAAGCGGGGACCGGTGAGGTGTGGAACGTGATCAATCTGACGGAGGACAACCATCCGTTACACATTCACTTGGGACTGTTCGTTGCATTGGAGCAGAGGGAGTTGGTGAATGTAGAGAAGTTTAAAGATTGCATGAATAAATTAAACGACGCCGTCAAGTGCCAAATAAGCAAATATGCCGTTGGCAAGAGAGTAGAGGTGCCAGCTCACGAGAAAGGTTGGAAGAATGTGTTTAAGATGAGACCCGGTACTGTGACAAAGATATTTTTGAGATTTGCTTACATACACTCGAATGCATCGTATGAGTTTGATCCTACTGCGAAGCCTGGTTACGTGTACCATTGCCATATCTTGGATCATGAGGACAATGCCATGATGAGACCATTGAAAATTGTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009888 GO:0009987 GO:0009991 GO:0010073 GO:0012505 GO:0016020 GO:0016036 GO:0016491 GO:0016679 GO:0016682 GO:0016722 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856 GO:0050896 GO:0051716 GO:0052716 GO:0055114 GO:0071496 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

575

Amino Acids

64.96

Weight (kDa)

9.31

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	140 - 217	4.8e-06	Multicopper oxidase
Cu-oxidase	PF00394	267 - 355	2.8e-06	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 570	1.3e-09	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23010 AT1G71040
fragaria_vesca	FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270
malus_domestica	MD13G1026500.v1.1 MD13G1026600.v1.1 MD16G1029700.v1.1
prunus_persica	Prupe.1G323200_v2.0.a1 Prupe.1G323200_v2.0.a1
pyrus_communis	pycom13g02510 pycom13g02520
rosa_chinensis	RchiOBHm_Chr4g0441061
rosa_laevigata	RLG00000006123
rosa_multiflora	Rmu_sc0004609.1_g000002 Rmu_sc0006317.1_g000001 Rmu_sc0035661.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381980
rosa_rugosa	Rorug04G0330500
rosa_samantha	Rh4AG382200 Rh4BG395800 Rh4CG410900 Rh4DG388900
rosa_wichuraiana	Rw4G032980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	853
Acc65I	GGTACC	1 cut(s)	570
AccB1I	GGYRCC	4 cut(s)	570, 994, 1303, 1522
AccB7I	CCANNNNNTGG	1 cut(s)	1675
AccII	CGCG	2 cut(s)	1219, 1322
AclWI	GGATC	5 cut(s)	368, 381, 1088, 1628, 1686
AcoI	YGGCCR	2 cut(s)	518, 830
AcsI	RAATTY	2 cut(s)	494, 683
AcuI	CTGAAG	1 cut(s)	883
AcvI	CACGTG	1 cut(s)	937
AcyI	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
AfaI	GTAC	9 cut(s)	203, 262, 572, 846, 956, 1190, 1247, 1573, 1661
AfiI	CCNNNNNNNGG	3 cut(s)	646, 940, 1675
AflIII	ACRYGT	4 cut(s)	108, 263, 1158, 1656
AgeI	ACCGGT	2 cut(s)	967, 1334
AgsI	TTSAA	5 cut(s)	69, 499, 841, 1285, 1711
AjiI	CACGTC	3 cut(s)	333, 1015, 1161
AjnI	CCWGG	3 cut(s)	98, 286, 1648
AluBI	AGCT	4 cut(s)	85, 717, 1153, 1529
AluI	AGCT	4 cut(s)	85, 717, 1153, 1529
Alw21I	GWGCWC	2 cut(s)	13, 432
Alw26I	GTCTC	4 cut(s)	56, 222, 1558, 1696
Alw44I	GTGCAC	1 cut(s)	428
AlwI	GGATC	5 cut(s)	368, 381, 1088, 1628, 1686
AlwNI	CAGNNNCTG	1 cut(s)	287
Ama87I	CYCGRG	1 cut(s)	557
AoxI	GGCC	5 cut(s)	390, 509, 518, 627, 830
ApaI	GGGCCC	1 cut(s)	513
ApaLI	GTGCAC	1 cut(s)	428
ApeKI	GCWGC	3 cut(s)	82, 103, 784
ApoI	RAATTY	2 cut(s)	494, 683
AseI	ATTAAT	1 cut(s)	35
AsiGI	ACCGGT	2 cut(s)	967, 1334
Asp718I	GGTACC	1 cut(s)	570
AspLEI	GCGC	4 cut(s)	273, 473, 997, 1221
AspS9I	GGNCC	7 cut(s)	290, 391, 509, 510, 627, 975, 1332
AsuC2I	CCSGG	3 cut(s)	558, 559, 1569
AsuHPI	GGTGA	5 cut(s)	478, 812, 1103, 1349, 1441
AsuII	TTCGAA	1 cut(s)	1031
AsuNHI	GCTAGC	1 cut(s)	881
AvaI	CYCGRG	1 cut(s)	557
AvaII	GGWCC	3 cut(s)	290, 975, 1332
BaeGI	GKGCMC	2 cut(s)	432, 513
BaeI	ACNNNNGTAYC	2 cut(s)	312, 345
BamHI	GGATCC	1 cut(s)	373
BanI	GGYRCC	4 cut(s)	570, 994, 1303, 1522
BanII	GRGCYC	1 cut(s)	513
BarI	GAAGNNNNNNTAC	2 cut(s)	1637, 1669
BauI	CACGAG	2 cut(s)	1249, 1532
BbrPI	CACGTG	1 cut(s)	937
BbsI	GAAGAC	1 cut(s)	663
Bbv12I	GWGCWC	2 cut(s)	13, 432
BbvI	GCAGC	3 cut(s)	90, 94, 796
BccI	CCATC	3 cut(s)	158, 458, 1383
BceAI	ACGGC	4 cut(s)	405, 454, 1460, 1487
BciT130I	CCWGG	3 cut(s)	100, 288, 1650
BciVI	GTATCC	1 cut(s)	1086
BclI	TGATCA	2 cut(s)	577, 1353
BcnI	CCSGG	3 cut(s)	558, 559, 1569
BcoDI	GTCTC	4 cut(s)	56, 222, 1558, 1696
BfaI	CTAG	3 cut(s)	698, 882, 1058
BfoI	RGCGCY	1 cut(s)	998
BfuI	GTATCC	1 cut(s)	1086
BglI	GCCNNNNNGGC	1 cut(s)	517
BisI	GCNGC	7 cut(s)	75, 83, 104, 442, 679, 785, 833
BlsI	GCNGC	7 cut(s)	76, 84, 105, 443, 680, 786, 834
Bme1390I	CCNGG	6 cut(s)	100, 288, 558, 559, 1569, 1650
Bme18I	GGWCC	3 cut(s)	290, 975, 1332
BmeT110I	CYCGRG	1 cut(s)	557
BmgBI	CACGTC	3 cut(s)	333, 1015, 1161
BmgT120I	GGNCC	7 cut(s)	290, 391, 509, 510, 627, 975, 1332
BmrFI	CCNGG	6 cut(s)	100, 288, 558, 559, 1569, 1650
BmsI	GCATC	4 cut(s)	453, 1057, 1223, 1628
BmtI	GCTAGC	1 cut(s)	885
BoxI	GACNNNNGTC	1 cut(s)	599
BpiI	GAAGAC	1 cut(s)	663
BplI	GAGNNNNNCTC	2 cut(s)	591, 623
Bpu14I	TTCGAA	1 cut(s)	1031
BpuMI	CCSGG	3 cut(s)	558, 559, 1569
Bsa29I	ATCGAT	1 cut(s)	318
BsaAI	YACGTR	3 cut(s)	266, 937, 1657
BsaHI	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
BsaI	GGTCTC	3 cut(s)	222, 1558, 1696
BsaJI	CCNNGG	8 cut(s)	310, 368, 436, 505, 557, 585, 958, 978
BsaWI	WCCGGW	3 cut(s)	752, 967, 1334
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 749, 779
Bsc4I	CCNNNNNNNGG	3 cut(s)	646, 940, 1675
Bse118I	RCCGGY	3 cut(s)	967, 1306, 1334
Bse1I	ACTGG	1 cut(s)	245
Bse3DI	GCAATG	3 cut(s)	892, 1242, 1663
BseBI	CCWGG	3 cut(s)	100, 288, 1650
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	8 cut(s)	310, 368, 436, 505, 557, 585, 958, 978
BseGI	GGATG	4 cut(s)	124, 444, 930, 1375
BseLI	CCNNNNNNNGG	3 cut(s)	646, 940, 1675
BseMI	GCAATG	3 cut(s)	892, 1242, 1663
BseMII	CTCAG	1 cut(s)	993
BseNI	ACTGG	1 cut(s)	245
BseRI	GAGGAG	1 cut(s)	599
BseSI	GKGCMC	2 cut(s)	432, 513
BseXI	GCAGC	3 cut(s)	90, 94, 796
BsgI	GTGCAG	1 cut(s)	89
Bsh1236I	CGCG	2 cut(s)	1219, 1322
Bsh1285I	CGRYCG	1 cut(s)	753
BshFI	GGCC	5 cut(s)	392, 511, 520, 629, 832
BshNI	GGYRCC	4 cut(s)	570, 994, 1303, 1522
BshTI	ACCGGT	2 cut(s)	967, 1334
BshVI	ATCGAT	1 cut(s)	318
BsiEI	CGRYCG	1 cut(s)	753
BsiHKAI	GWGCWC	2 cut(s)	13, 432
BsiHKCI	CYCGRG	1 cut(s)	557
BsiSI	CCGG	9 cut(s)	236, 558, 647, 753, 788, 968, 1307, 1335, 1569
BslFI	GGGAC	3 cut(s)	988, 1345, 1410
BslI	CCNNNNNNNGG	3 cut(s)	646, 940, 1675
BsmAI	GTCTC	4 cut(s)	56, 222, 1558, 1696
BsmFI	GGGAC	3 cut(s)	988, 1345, 1410
BsmI	GAATGC	2 cut(s)	1048, 1621
BsnI	GGCC	5 cut(s)	392, 511, 520, 629, 832
Bso31I	GGTCTC	3 cut(s)	222, 1558, 1696
BsoBI	CYCGRG	1 cut(s)	557
Bsp119I	TTCGAA	1 cut(s)	1031
Bsp120I	GGGCCC	1 cut(s)	509
Bsp1286I	GDGCHC	3 cut(s)	13, 432, 513
Bsp1407I	TGTACA	1 cut(s)	201
Bsp19I	CCATGG	1 cut(s)	585
Bsp68I	TCGCGA	1 cut(s)	1322
BspANI	GGCC	5 cut(s)	392, 511, 520, 629, 832
BspCNI	CTCAG	1 cut(s)	994
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	2 cut(s)	1219, 1322
BspHI	TCATGA	1 cut(s)	1681
BspOI	GCTAGC	1 cut(s)	885
BspPI	GGATC	5 cut(s)	368, 381, 1088, 1628, 1686
BspT104I	TTCGAA	1 cut(s)	1031
BspT107I	GGYRCC	4 cut(s)	570, 994, 1303, 1522
BspTNI	GGTCTC	3 cut(s)	222, 1558, 1696
BsrDI	GCAATG	3 cut(s)	892, 1242, 1663
BsrFI	RCCGGY	3 cut(s)	967, 1306, 1334
BsrGI	TGTACA	1 cut(s)	201
BsrI	ACTGG	1 cut(s)	245
BssAI	RCCGGY	3 cut(s)	967, 1306, 1334
BssECI	CCNNGG	8 cut(s)	310, 368, 436, 505, 557, 585, 958, 978
BssNI	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
BssSI	CACGAG	2 cut(s)	1249, 1532
BssT1I	CCWWGG	5 cut(s)	310, 368, 585, 958, 978
Bst2BI	CACGAG	2 cut(s)	1249, 1532
Bst2UI	CCWGG	3 cut(s)	100, 288, 1650
Bst4CI	ACNGT	9 cut(s)	260, 283, 424, 731, 920, 1074, 1115, 1401, 1576
BstACI	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
BstAUI	TGTACA	1 cut(s)	201
BstBAI	YACGTR	3 cut(s)	266, 937, 1657
BstBI	TTCGAA	1 cut(s)	1031
BstC8I	GCNNGC	5 cut(s)	460, 616, 883, 993, 1527
BstDEI	CTNAG	1 cut(s)	1002
BstDSI	CCRYGG	3 cut(s)	436, 505, 585
BstF5I	GGATG	4 cut(s)	124, 444, 930, 1375
BstFNI	CGCG	2 cut(s)	1219, 1322
BstH2I	RGCGCY	1 cut(s)	998
BstHHI	GCGC	4 cut(s)	273, 473, 997, 1221
BstMAI	GTCTC	4 cut(s)	56, 222, 1558, 1696
BstMCI	CGRYCG	1 cut(s)	753
BstMWI	GCNNNNNNNGC	9 cut(s)	398, 468, 517, 784, 887, 950, 1058, 1067, 1491
BstNI	CCWGG	3 cut(s)	100, 288, 1650
BstNSI	RCATGY	2 cut(s)	112, 202
BstPAI	GACNNNNGTC	1 cut(s)	599
BstSCI	CCNGG	6 cut(s)	98, 286, 556, 557, 1567, 1648
BstSLI	GKGCMC	2 cut(s)	432, 513
BstUI	CGCG	2 cut(s)	1219, 1322
BstV1I	GCAGC	3 cut(s)	90, 94, 796
BstV2I	GAAGAC	1 cut(s)	663
BstX2I	RGATCY	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	373
Bsu15I	ATCGAT	1 cut(s)	318
BsuI	GTATCC	1 cut(s)	1086
BsuRI	GGCC	5 cut(s)	392, 511, 520, 629, 832
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	3 cut(s)	436, 505, 585
BtgZI	GCGATG	3 cut(s)	477, 1200, 1216
BtrI	CACGTC	3 cut(s)	333, 1015, 1161
BtsCI	GGATG	4 cut(s)	124, 444, 930, 1375
BtsI	GCAGTG	2 cut(s)	785, 1104
BtsIMutI	CAGTG	4 cut(s)	252, 288, 785, 1104
BtuMI	TCGCGA	1 cut(s)	1322
Cac8I	GCNNGC	5 cut(s)	460, 616, 883, 993, 1527
CaiI	CAGNNNCTG	1 cut(s)	287
CciI	TCATGA	1 cut(s)	1681
CfoI	GCGC	4 cut(s)	273, 473, 997, 1221
Cfr10I	RCCGGY	3 cut(s)	967, 1306, 1334
Cfr13I	GGNCC	7 cut(s)	290, 391, 509, 510, 627, 975, 1332
Cfr9I	CCCGGG	1 cut(s)	557
ClaI	ATCGAT	1 cut(s)	318
CseI	GACGC	4 cut(s)	250, 812, 1265, 1481
Csp6I	GTAC	9 cut(s)	202, 261, 571, 845, 955, 1189, 1246, 1572, 1660
CspAI	ACCGGT	2 cut(s)	967, 1334
CspCI	CAANNNNNGTGG	2 cut(s)	487, 522
CviQI	GTAC	9 cut(s)	202, 261, 571, 845, 955, 1189, 1246, 1572, 1660
DdeI	CTNAG	1 cut(s)	1002
DinI	GGCGCC	1 cut(s)	996
DraI	TTTAAA	1 cut(s)	1447
EaeI	YGGCCR	2 cut(s)	518, 830
Eco130I	CCWWGG	5 cut(s)	310, 368, 585, 958, 978
Eco24I	GRGCYC	1 cut(s)	513
Eco31I	GGTCTC	3 cut(s)	222, 1558, 1696
Eco32I	GATATC	1 cut(s)	533
Eco47I	GGWCC	3 cut(s)	290, 975, 1332
Eco57I	CTGAAG	1 cut(s)	883
Eco72I	CACGTG	1 cut(s)	937
Eco88I	CYCGRG	1 cut(s)	557
EcoO109I	RGGNCCY	2 cut(s)	510, 627
EcoRII	CCWGG	3 cut(s)	98, 286, 1648
EcoRV	GATATC	1 cut(s)	533
EcoT14I	CCWWGG	5 cut(s)	310, 368, 585, 958, 978
EcoT22I	ATGCAT	1 cut(s)	1621
EcoT38I	GRGCYC	1 cut(s)	513
EgeI	GGCGCC	1 cut(s)	996
EheI	GGCGCC	1 cut(s)	996
ErhI	CCWWGG	5 cut(s)	310, 368, 585, 958, 978
FalI	AAGNNNNNCTT	2 cut(s)	648, 680
FaqI	GGGAC	3 cut(s)	988, 1345, 1410
FauI	CCCGC	5 cut(s)	406, 463, 669, 783, 1321
FbaI	TGATCA	2 cut(s)	577, 1353
Fnu4HI	GCNGC	7 cut(s)	75, 83, 104, 442, 679, 785, 833
FokI	GGATG	4 cut(s)	131, 431, 917, 1362
FriOI	GRGCYC	1 cut(s)	513
Fsp4HI	GCNGC	7 cut(s)	75, 83, 104, 442, 679, 785, 833
FspBI	CTAG	3 cut(s)	698, 882, 1058
GlaI	GCGC	4 cut(s)	272, 472, 996, 1220
GluI	GCNGC	7 cut(s)	75, 83, 104, 442, 679, 785, 833
HaeII	RGCGCY	1 cut(s)	998
HaeIII	GGCC	5 cut(s)	392, 511, 520, 629, 832
HapII	CCGG	9 cut(s)	236, 558, 647, 753, 788, 968, 1307, 1335, 1569
HgaI	GACGC	4 cut(s)	250, 812, 1265, 1481
HhaI	GCGC	4 cut(s)	273, 473, 997, 1221
Hin1I	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
Hin6I	GCGC	4 cut(s)	271, 471, 995, 1219
HinP1I	GCGC	4 cut(s)	271, 471, 995, 1219
HincII	GTYRAC	4 cut(s)	604, 1024, 1102, 1141
HindII	GTYRAC	4 cut(s)	604, 1024, 1102, 1141
HinfI	GANTC	7 cut(s)	219, 315, 600, 669, 903, 927, 947
HpaI	GTTAAC	1 cut(s)	1102
HpaII	CCGG	9 cut(s)	236, 558, 647, 753, 788, 968, 1307, 1335, 1569
HphI	GGTGA	5 cut(s)	478, 812, 1103, 1349, 1441
Hpy166II	GTNNAC	9 cut(s)	263, 430, 486, 604, 1024, 1102, 1141, 1248, 1660
Hpy188I	TCNGA	7 cut(s)	18, 96, 869, 902, 1003, 1150, 1362
Hpy188III	TCNNGA	6 cut(s)	128, 328, 1199, 1321, 1532, 1682
Hpy8I	GTNNAC	9 cut(s)	263, 430, 486, 604, 1024, 1102, 1141, 1248, 1660
Hpy99I	CGWCG	7 cut(s)	244, 731, 852, 855, 1090, 1165, 1475
HpyAV	CCTTC	4 cut(s)	242, 817, 835, 1008
HpyCH4III	ACNGT	9 cut(s)	260, 283, 424, 731, 920, 1074, 1115, 1401, 1576
HpyCH4IV	ACGT	9 cut(s)	265, 332, 850, 936, 1014, 1160, 1167, 1350, 1656
HpyCH4V	TGCA	8 cut(s)	106, 430, 1070, 1126, 1214, 1409, 1455, 1619
HpyF10VI	GCNNNNNNNGC	9 cut(s)	398, 468, 517, 784, 887, 950, 1058, 1067, 1491
HpyF3I	CTNAG	1 cut(s)	1002
HpySE526I	ACGT	9 cut(s)	265, 332, 850, 936, 1014, 1160, 1167, 1350, 1656
Hsp92I	GRCGYC	5 cut(s)	242, 804, 850, 995, 1473
HspAI	GCGC	4 cut(s)	271, 471, 995, 1219
KasI	GGCGCC	1 cut(s)	994
KpnI	GGTACC	1 cut(s)	574
Ksp22I	TGATCA	2 cut(s)	577, 1353
KspAI	GTTAAC	1 cut(s)	1102
LmnI	GCTCC	1 cut(s)	1414
Lsp1109I	GCAGC	3 cut(s)	90, 94, 796
LweI	GCATC	4 cut(s)	453, 1057, 1223, 1628
MaeI	CTAG	3 cut(s)	698, 882, 1058
MaeII	ACGT	9 cut(s)	265, 332, 850, 936, 1014, 1160, 1167, 1350, 1656
MaeIII	GTNAC	6 cut(s)	328, 800, 1253, 1380, 1576, 1652
MboII	GAAGA	6 cut(s)	540, 668, 889, 898, 901, 1558
MflI	RGATCY	1 cut(s)	373
MhlI	GDGCHC	3 cut(s)	13, 432, 513
MluCI	AATT	8 cut(s)	192, 340, 494, 683, 870, 1182, 1463, 1713
Mly113I	GGCGCC	1 cut(s)	995
MlyI	GAGTC	2 cut(s)	609, 663
MmeI	TCCRAC	2 cut(s)	410, 1523
Mph1103I	ATGCAT	1 cut(s)	1621
MseI	TTAA	7 cut(s)	35, 188, 1101, 1181, 1446, 1466, 1557
MslI	CAYNNNNRTG	6 cut(s)	113, 203, 812, 935, 1235, 1614
MspI	CCGG	9 cut(s)	236, 558, 647, 753, 788, 968, 1307, 1335, 1569
MspR9I	CCNGG	6 cut(s)	100, 288, 558, 559, 1569, 1650
Mva1269I	GAATGC	2 cut(s)	1048, 1621
MvaI	CCWGG	3 cut(s)	100, 288, 1650
MvnI	CGCG	2 cut(s)	1219, 1322
MwoI	GCNNNNNNNGC	9 cut(s)	398, 468, 517, 784, 887, 950, 1058, 1067, 1491
NarI	GGCGCC	1 cut(s)	995
NciI	CCSGG	3 cut(s)	558, 559, 1569
NcoI	CCATGG	1 cut(s)	585
NheI	GCTAGC	1 cut(s)	881
NmuCI	GTSAC	4 cut(s)	328, 800, 1253, 1576
NruI	TCGCGA	1 cut(s)	1322
NsiI	ATGCAT	1 cut(s)	1621
NspI	RCATGY	2 cut(s)	112, 202
NspV	TTCGAA	1 cut(s)	1031
PagI	TCATGA	1 cut(s)	1681
PciI	ACATGT	1 cut(s)	108
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 1319, 1619
PctI	GAATGC	2 cut(s)	1048, 1621
PfeI	GAWTC	5 cut(s)	219, 315, 903, 927, 947
PflFI	GACNNNGTC	1 cut(s)	1475
PflMI	CCANNNNNTGG	1 cut(s)	1675
PinAI	ACCGGT	2 cut(s)	967, 1334
PkrI	GCNGC	7 cut(s)	76, 84, 105, 443, 680, 786, 834
PleI	GAGTC	2 cut(s)	608, 663
PluTI	GGCGCC	1 cut(s)	998
PmaCI	CACGTG	1 cut(s)	937
PmlI	CACGTG	1 cut(s)	937
PpsI	GAGTC	2 cut(s)	608, 663
Ppu21I	YACGTR	3 cut(s)	266, 937, 1657
PscI	ACATGT	1 cut(s)	108
PshAI	GACNNNNGTC	1 cut(s)	599
PshBI	ATTAAT	1 cut(s)	35
Psp6I	CCWGG	3 cut(s)	98, 286, 1648
PspCI	CACGTG	1 cut(s)	937
PspGI	CCWGG	3 cut(s)	98, 286, 1648
PspOMI	GGGCCC	1 cut(s)	509
PspPI	GGNCC	7 cut(s)	290, 391, 509, 510, 627, 975, 1332
PsrI	GAACNNNNNNTAC	4 cut(s)	153, 185, 554, 586
PstNI	CAGNNNCTG	1 cut(s)	287
PsuI	RGATCY	1 cut(s)	373
PsyI	GACNNNGTC	1 cut(s)	1475
RruI	TCGCGA	1 cut(s)	1322
RsaI	GTAC	9 cut(s)	203, 262, 572, 846, 956, 1190, 1247, 1573, 1661
RsaNI	GTAC	9 cut(s)	202, 261, 571, 845, 955, 1189, 1246, 1572, 1660
RseI	CAYNNNNRTG	6 cut(s)	113, 203, 812, 935, 1235, 1614
SaqAI	TTAA	7 cut(s)	35, 188, 1101, 1181, 1446, 1466, 1557
SatI	GCNGC	7 cut(s)	75, 83, 104, 442, 679, 785, 833
Sau96I	GGNCC	7 cut(s)	290, 391, 509, 510, 627, 975, 1332
SchI	GAGTC	2 cut(s)	609, 663
ScrFI	CCNGG	6 cut(s)	100, 288, 558, 559, 1569, 1650
SduI	GDGCHC	3 cut(s)	13, 432, 513
SfaNI	GCATC	4 cut(s)	453, 1057, 1223, 1628
SfiI	GGCCNNNNNGGCC	1 cut(s)	517
SfoI	GGCGCC	1 cut(s)	996
SfuI	TTCGAA	1 cut(s)	1031
SinI	GGWCC	3 cut(s)	290, 975, 1332
SmaI	CCCGGG	1 cut(s)	559
SmiMI	CAYNNNNRTG	6 cut(s)	113, 203, 812, 935, 1235, 1614
Sse9I	AATT	8 cut(s)	192, 340, 494, 683, 870, 1182, 1463, 1713
SspDI	GGCGCC	1 cut(s)	994
SspI	AATATT	1 cut(s)	794
SspMI	CTAG	3 cut(s)	698, 882, 1058
StyD4I	CCNGG	6 cut(s)	98, 286, 556, 557, 1567, 1648
StyI	CCWWGG	5 cut(s)	310, 368, 585, 958, 978
TaaI	ACNGT	9 cut(s)	260, 283, 424, 731, 920, 1074, 1115, 1401, 1576
TaiI	ACGT	9 cut(s)	268, 335, 853, 939, 1017, 1163, 1170, 1353, 1659
TaqI	TCGA	9 cut(s)	300, 318, 654, 667, 691, 734, 749, 1031, 1613
TasI	AATT	8 cut(s)	192, 340, 494, 683, 870, 1182, 1463, 1713
TatI	WGTACW	2 cut(s)	201, 1245
TauI	GCSGC	4 cut(s)	77, 444, 681, 835
TfiI	GAWTC	5 cut(s)	219, 315, 903, 927, 947
Tru1I	TTAA	7 cut(s)	35, 188, 1101, 1181, 1446, 1466, 1557
Tru9I	TTAA	7 cut(s)	35, 188, 1101, 1181, 1446, 1466, 1557
TscAI	CASTG	4 cut(s)	252, 288, 785, 1111
TseFI	GTSAC	4 cut(s)	328, 800, 1253, 1576
TseI	GCWGC	3 cut(s)	82, 103, 784
Tsp45I	GTSAC	4 cut(s)	328, 800, 1253, 1576
TspDTI	ATGAA	6 cut(s)	135, 221, 465, 758, 919, 1472
TspGWI	ACGGA	4 cut(s)	629, 1328, 1368, 1379
TspMI	CCCGGG	1 cut(s)	557
TspRI	CASTG	4 cut(s)	252, 288, 785, 1111
Tth111I	GACNNNGTC	1 cut(s)	1475
Van91I	CCANNNNNTGG	1 cut(s)	1675
VneI	GTGCAC	1 cut(s)	428
VpaK11BI	GGWCC	3 cut(s)	290, 975, 1332
VspI	ATTAAT	1 cut(s)	35
XapI	RAATTY	2 cut(s)	494, 683
XceI	RCATGY	2 cut(s)	112, 202
XmaI	CCCGGG	1 cut(s)	557
XspI	CTAG	3 cut(s)	698, 882, 1058
ZraI	GACGTC	1 cut(s)	851
Zsp2I	ATGCAT	1 cut(s)	1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.