Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006174

Physical Location & Seq

Genomic Coordinates Reverse (-)

1928538 .. 1932287

Gene Structure 3750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1026600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGTTACTGTGCAGGGAGTTTTGGTGTTGCTAATAGCTTTTATGGGGGTGCTTTTGGAGACTTCATGGGCGGAAGATCAGCTTGTAAATGTGAGCACGTTGCAGATGTTTGTGGATAAACTTCCCGATATGCCTCTACTGAAAGGCTTTGATGTTGTCAATGGTGTTCCCAAACCCAAGTCATTGAAGATTGGCATGTACATGAAAACATGGAGATTCCACAGAGACCTTCCGGCGACGCCAGTGTTCGCCTACGGTACAAGTGAGCGCACAGCAACAGTCCCTGGTCCAACAATCGAAGCCCTCCAGGGAATCGAAACCTTCGTGACGTGGAGTAATTACCTCCCTTCAGAACACATTCTGCCTTGGGACCCGACCATTCCCACGGCCATACCCGCTAGTAAGAAGGGCGTCCCTACTGTGGTGCACCTCCACGGCGGCATCCATGAACCAGCAAGCGATGGAAGTGCAAAGGCATGGTTCACCGCCGAGTTCAAAGACCGTGGGCCTGCTTGGACCCAGCAAACATATCGATACCGCAATCAGCAACAACCCGGGAACCTGTGGTACCATGATCACACCATGGGGTTGACCAGAGTCAACCTCCTCGCTGGCTTGATCGGGGCCTACATTGTCTGTCAACCGGAAGTCGAGGGCCCGCTTCGACTTCCGAGTGGCGAATTTGATCGAACGCTGGTCGTGTTTGATCGGAGCTTTCGCACCAACGGTTCGATATACATGAATTCTACTGGAAACAATCCCTCCATACACCCGCAATGGCAGCCGGAATATTTTGGTGACGCAATTATAGTGAATGGGAAGGCGTGGCCGCAATTGAAGGTACGACGTCGTAAATACAGGTTCCGAATTATCAACGCCAGCAATGCGAGATTCTTCAAATTCTTCTTCACCAACGGTCTGGGATTTATCCACGTGGGGTCTGATTCAGTTTACCTTGGGAAACCGGTGGAGACCAAGGACTTTTTGCTGGGGCCATCTGAGATCACAGACGTGGTGGTTGACTTTTCCAAGTCTGAGAATGCCAATGTTACCCTAGCCAATGATGCTCCGTATCCTTACCCATCGGGTGATCCCGTTAACGATGCCAACGGTAAGGTCATGCAGTTTTTGATTGCTGACCGTTCAGAGCTAGACCCATCGCGCGTTCCGTCAACGTTAATTCAGTACCCCGTCCCTGATCTATCAAGTGCATCGCGCACACGATACATCACAATGTACGAGTACGAGAGCAACACTGGTGACCCGACACATCTTTATTTGAACGCGAAACCTTTCGACGCACCGGCGACGGAGATTGTGAAAGCAGGGACCAGCGAGGTGTGGAACGTGATCAATCTGACGCAGGACAATCATCCGTTACACATTCACTTGGGACTGTTCGTTGTATTCGAACAGCGGGAGTTGGTGAATGAGGAGGAGTTTAAAGATTGCATGAATAAGCTGAATGATGCCGTCAAGTGCCAAATAAGCAAGTATGCACGTGGCAAAACTGTAGAGGTGCCAGCTCACGAGAAAGGGTGGAAGAACGTTTTCAAGATGAGACCCGGGACTGTGACAAGGATACTGTTGAGGTTGGCTTACATACACTCGAATGCATCGTATGAGTTCGATCCTACGGGGGAGCCTGGCTACGTGTACCATTGCCATATCTTGGATCACGAGGATAATGTGATGATGAGACCCTTGAAACTTGTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009888 GO:0009987 GO:0009991 GO:0010073 GO:0012505 GO:0016020 GO:0016036 GO:0016491 GO:0016679 GO:0016682 GO:0016722 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856 GO:0050896 GO:0051716 GO:0052716 GO:0055114 GO:0071496 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

574

Amino Acids

64.63

Weight (kDa)

6.56

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	139 - 215	6e-06	Multicopper oxidase
Cu-oxidase	PF00394	266 - 349	8.3e-06	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 569	1.1e-10	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23010 AT1G71040
fragaria_vesca	FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270
malus_domestica	MD13G1026500.v1.1 MD13G1026600.v1.1 MD16G1029700.v1.1
prunus_persica	Prupe.1G323200_v2.0.a1 Prupe.1G323200_v2.0.a1
pyrus_communis	pycom13g02510 pycom13g02520
rosa_chinensis	RchiOBHm_Chr4g0441061
rosa_laevigata	RLG00000006123
rosa_multiflora	Rmu_sc0004609.1_g000002 Rmu_sc0006317.1_g000001 Rmu_sc0035661.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381980
rosa_rugosa	Rorug04G0330500
rosa_samantha	Rh4AG382200 Rh4BG395800 Rh4CG410900 Rh4DG388900
rosa_wichuraiana	Rw4G032980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	850
Acc65I	GGTACC	1 cut(s)	567
AccB1I	GGYRCC	2 cut(s)	567, 1519
AccB7I	CCANNNNNTGG	1 cut(s)	1672
AccII	CGCG	4 cut(s)	1162, 1164, 1216, 1286
AciI	CCGC	9 cut(s)	71, 396, 438, 486, 538, 659, 773, 830, 1417
AclI	AACGTT	2 cut(s)	1175, 1548
AclWI	GGATC	3 cut(s)	1085, 1625, 1683
AcoI	YGGCCR	2 cut(s)	387, 827
AcsI	RAATTY	3 cut(s)	680, 742, 899
AcuI	CTGAAG	1 cut(s)	333
AcvI	CACGTG	2 cut(s)	934, 1502
AcyI	GRCGYC	3 cut(s)	239, 411, 847
AfaI	GTAC	8 cut(s)	200, 259, 569, 843, 1187, 1238, 1244, 1658
AfiI	CCNNNNNNNGG	2 cut(s)	421, 1672
AflIII	ACRYGT	1 cut(s)	1653
AgeI	ACCGGT	1 cut(s)	964
AgsI	TTSAA	7 cut(s)	187, 496, 838, 898, 1282, 1555, 1708
AjiI	CACGTC	2 cut(s)	330, 1012
AjnI	CCWGG	3 cut(s)	283, 306, 1645
AleI	CACNNNNGTG	1 cut(s)	1010
AluBI	AGCT	6 cut(s)	38, 82, 714, 1150, 1462, 1526
AluI	AGCT	6 cut(s)	38, 82, 714, 1150, 1462, 1526
Alw21I	GWGCWC	2 cut(s)	98, 429
Alw26I	GTCTC	5 cut(s)	53, 219, 965, 1555, 1693
Alw44I	GTGCAC	1 cut(s)	425
AlwI	GGATC	3 cut(s)	1085, 1625, 1683
AlwNI	CAGNNNCTG	1 cut(s)	284
Ama87I	CYCGRG	2 cut(s)	554, 1565
AoxI	GGCC	6 cut(s)	387, 506, 624, 655, 827, 992
ApaI	GGGCCC	1 cut(s)	659
ApaLI	GTGCAC	1 cut(s)	425
ApeKI	GCWGC	1 cut(s)	781
ApoI	RAATTY	3 cut(s)	680, 742, 899
AsiGI	ACCGGT	1 cut(s)	964
Asp700I	GAANNNNTTC	3 cut(s)	357, 1292, 1550
Asp718I	GGTACC	1 cut(s)	567
AspLEI	GCGC	3 cut(s)	270, 1164, 1218
AspS9I	GGNCC	9 cut(s)	287, 370, 506, 516, 624, 655, 656, 992, 1329
AsuC2I	CCSGG	4 cut(s)	555, 556, 1566, 1567
AsuHPI	GGTGA	6 cut(s)	475, 809, 901, 1100, 1271, 1438
AsuII	TTCGAA	1 cut(s)	1410
AvaI	CYCGRG	2 cut(s)	554, 1565
AvaII	GGWCC	4 cut(s)	287, 370, 516, 1329
BaeGI	GKGCMC	2 cut(s)	429, 659
BanI	GGYRCC	2 cut(s)	567, 1519
BanII	GRGCYC	1 cut(s)	659
BauI	CACGAG	2 cut(s)	1529, 1679
BbrPI	CACGTG	2 cut(s)	934, 1502
Bbv12I	GWGCWC	2 cut(s)	98, 429
BbvI	GCAGC	1 cut(s)	793
BccI	CCATC	4 cut(s)	455, 1003, 1090, 1165
BceAI	ACGGC	3 cut(s)	402, 451, 1457
BcgI	CGANNNNNNTGC	4 cut(s)	449, 483, 512, 546
BciT130I	CCWGG	3 cut(s)	285, 308, 1647
BciVI	GTATCC	2 cut(s)	1083, 1575
BclI	TGATCA	2 cut(s)	574, 1350
BcnI	CCSGG	4 cut(s)	555, 556, 1566, 1567
BcoDI	GTCTC	5 cut(s)	53, 219, 965, 1555, 1693
BfaI	CTAG	3 cut(s)	399, 1055, 1151
BfmI	CTRYAG	1 cut(s)	1512
BfuI	GTATCC	2 cut(s)	1083, 1575
BisI	GCNGC	3 cut(s)	439, 782, 830
BlsI	GCNGC	3 cut(s)	440, 783, 831
Bme1390I	CCNGG	7 cut(s)	285, 308, 555, 556, 1566, 1567, 1647
Bme18I	GGWCC	4 cut(s)	287, 370, 516, 1329
BmeT110I	CYCGRG	2 cut(s)	554, 1565
BmgBI	CACGTC	2 cut(s)	330, 1012
BmgT120I	GGNCC	9 cut(s)	287, 370, 506, 516, 624, 655, 656, 992, 1329
BmrFI	CCNGG	7 cut(s)	285, 308, 555, 556, 1566, 1567, 1647
BmsI	GCATC	6 cut(s)	450, 1054, 1093, 1220, 1459, 1625
BoxI	GACNNNNGTC	1 cut(s)	596
BplI	GAGNNNNNCTC	2 cut(s)	588, 620
BpmI	CTGGAG	1 cut(s)	290
Bpu14I	TTCGAA	1 cut(s)	1410
BpuMI	CCSGG	4 cut(s)	555, 556, 1566, 1567
Bsa29I	ATCGAT	1 cut(s)	532
BsaAI	YACGTR	3 cut(s)	934, 1502, 1654
BsaHI	GRCGYC	3 cut(s)	239, 411, 847
BsaI	GGTCTC	4 cut(s)	219, 965, 1555, 1693
BsaWI	WCCGGW	2 cut(s)	643, 964
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 746, 776
Bsc4I	CCNNNNNNNGG	2 cut(s)	421, 1672
Bse118I	RCCGGY	2 cut(s)	964, 1303
Bse1I	ACTGG	3 cut(s)	242, 754, 1261
Bse3DI	GCAATG	3 cut(s)	782, 889, 1660
BseBI	CCWGG	3 cut(s)	285, 308, 1647
BseCI	ATCGAT	1 cut(s)	532
BseGI	GGATG	2 cut(s)	441, 1372
BseLI	CCNNNNNNNGG	2 cut(s)	421, 1672
BseMI	GCAATG	3 cut(s)	782, 889, 1660
BseMII	CTCAG	2 cut(s)	990, 1026
BseNI	ACTGG	3 cut(s)	242, 754, 1261
BseRI	GAGGAG	3 cut(s)	596, 1448, 1451
BseSI	GKGCMC	2 cut(s)	429, 659
BseXI	GCAGC	1 cut(s)	793
BseYI	CCCAGC	2 cut(s)	519, 988
BsgI	GTGCAG	1 cut(s)	32
Bsh1236I	CGCG	4 cut(s)	1162, 1164, 1216, 1286
BshFI	GGCC	6 cut(s)	389, 508, 626, 657, 829, 994
BshNI	GGYRCC	2 cut(s)	567, 1519
BshTI	ACCGGT	1 cut(s)	964
BshVI	ATCGAT	1 cut(s)	532
BsiHKAI	GWGCWC	2 cut(s)	98, 429
BsiHKCI	CYCGRG	2 cut(s)	554, 1565
BsiSI	CCGG	7 cut(s)	233, 555, 644, 785, 965, 1304, 1566
BslFI	GGGAC	7 cut(s)	266, 383, 398, 1178, 1342, 1407, 1582
BslI	CCNNNNNNNGG	2 cut(s)	421, 1672
BsmAI	GTCTC	5 cut(s)	53, 219, 965, 1555, 1693
BsmFI	GGGAC	7 cut(s)	266, 383, 398, 1178, 1342, 1407, 1582
BsmI	GAATGC	2 cut(s)	1045, 1618
BsnI	GGCC	6 cut(s)	389, 508, 626, 657, 829, 994
Bso31I	GGTCTC	4 cut(s)	219, 965, 1555, 1693
BsoBI	CYCGRG	2 cut(s)	554, 1565
Bsp119I	TTCGAA	1 cut(s)	1410
Bsp120I	GGGCCC	1 cut(s)	655
Bsp1286I	GDGCHC	3 cut(s)	98, 429, 659
Bsp1407I	TGTACA	1 cut(s)	198
Bsp19I	CCATGG	1 cut(s)	582
BspACI	CCGC	9 cut(s)	71, 396, 438, 486, 538, 659, 773, 830, 1417
BspANI	GGCC	6 cut(s)	389, 508, 626, 657, 829, 994
BspCNI	CTCAG	2 cut(s)	991, 1027
BspDI	ATCGAT	1 cut(s)	532
BspFNI	CGCG	4 cut(s)	1162, 1164, 1216, 1286
BspPI	GGATC	3 cut(s)	1085, 1625, 1683
BspT104I	TTCGAA	1 cut(s)	1410
BspT107I	GGYRCC	2 cut(s)	567, 1519
BspTNI	GGTCTC	4 cut(s)	219, 965, 1555, 1693
BsrDI	GCAATG	3 cut(s)	782, 889, 1660
BsrFI	RCCGGY	2 cut(s)	964, 1303
BsrGI	TGTACA	1 cut(s)	198
BsrI	ACTGG	3 cut(s)	242, 754, 1261
BssAI	RCCGGY	2 cut(s)	964, 1303
BssNI	GRCGYC	3 cut(s)	239, 411, 847
BssSI	CACGAG	2 cut(s)	1529, 1679
BssT1I	CCWWGG	4 cut(s)	365, 582, 955, 975
Bst2BI	CACGAG	2 cut(s)	1529, 1679
Bst2UI	CCWGG	3 cut(s)	285, 308, 1647
BstACI	GRCGYC	3 cut(s)	239, 411, 847
BstAUI	TGTACA	1 cut(s)	198
BstBAI	YACGTR	3 cut(s)	934, 1502, 1654
BstBI	TTCGAA	1 cut(s)	1410
BstC8I	GCNNGC	6 cut(s)	457, 510, 613, 659, 880, 1524
BstDEI	CTNAG	2 cut(s)	999, 1035
BstDSI	CCRYGG	4 cut(s)	384, 433, 502, 582
BstEII	GGTNACC	1 cut(s)	1259
BstF5I	GGATG	2 cut(s)	441, 1372
BstFNI	CGCG	4 cut(s)	1162, 1164, 1216, 1286
BstHHI	GCGC	3 cut(s)	270, 1164, 1218
BstMAI	GTCTC	5 cut(s)	53, 219, 965, 1555, 1693
BstMWI	GCNNNNNNNGC	5 cut(s)	395, 781, 884, 1064, 1488
BstNI	CCWGG	3 cut(s)	285, 308, 1647
BstNSI	RCATGY	1 cut(s)	199
BstPAI	GACNNNNGTC	1 cut(s)	596
BstPI	GGTNACC	1 cut(s)	1259
BstSCI	CCNGG	7 cut(s)	283, 306, 553, 554, 1564, 1565, 1645
BstSFI	CTRYAG	1 cut(s)	1512
BstSLI	GKGCMC	2 cut(s)	429, 659
BstUI	CGCG	4 cut(s)	1162, 1164, 1216, 1286
BstV1I	GCAGC	1 cut(s)	793
BstXI	CCANNNNNNTGG	1 cut(s)	919
Bsu15I	ATCGAT	1 cut(s)	532
BsuI	GTATCC	2 cut(s)	1083, 1575
BsuRI	GGCC	6 cut(s)	389, 508, 626, 657, 829, 994
BsuTUI	ATCGAT	1 cut(s)	532
BtgI	CCRYGG	4 cut(s)	384, 433, 502, 582
BtgZI	GCGATG	3 cut(s)	474, 1143, 1197
BtrI	CACGTC	2 cut(s)	330, 1012
BtsCI	GGATG	2 cut(s)	441, 1372
BtsIMutI	CAGTG	2 cut(s)	249, 1254
Cac8I	GCNNGC	6 cut(s)	457, 510, 613, 659, 880, 1524
CaiI	CAGNNNCTG	1 cut(s)	284
CfoI	GCGC	3 cut(s)	270, 1164, 1218
Cfr10I	RCCGGY	2 cut(s)	964, 1303
Cfr13I	GGNCC	9 cut(s)	287, 370, 506, 516, 624, 655, 656, 992, 1329
Cfr9I	CCCGGG	2 cut(s)	554, 1565
ClaI	ATCGAT	1 cut(s)	532
CseI	GACGC	5 cut(s)	247, 400, 809, 1307, 1369
Csp6I	GTAC	8 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1657
CspAI	ACCGGT	1 cut(s)	964
CspCI	CAANNNNNGTGG	2 cut(s)	484, 519
CviQI	GTAC	8 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1657
DdeI	CTNAG	2 cut(s)	999, 1035
DraI	TTTAAA	1 cut(s)	1444
EaeI	YGGCCR	2 cut(s)	387, 827
EciI	GGCGGA	1 cut(s)	86
Eco130I	CCWWGG	4 cut(s)	365, 582, 955, 975
Eco24I	GRGCYC	1 cut(s)	659
Eco31I	GGTCTC	4 cut(s)	219, 965, 1555, 1693
Eco47I	GGWCC	4 cut(s)	287, 370, 516, 1329
Eco57I	CTGAAG	1 cut(s)	333
Eco72I	CACGTG	2 cut(s)	934, 1502
Eco88I	CYCGRG	2 cut(s)	554, 1565
Eco91I	GGTNACC	1 cut(s)	1259
EcoO109I	RGGNCCY	3 cut(s)	370, 624, 655
EcoO65I	GGTNACC	1 cut(s)	1259
EcoRI	GAATTC	1 cut(s)	742
EcoRII	CCWGG	3 cut(s)	283, 306, 1645
EcoT14I	CCWWGG	4 cut(s)	365, 582, 955, 975
EcoT22I	ATGCAT	1 cut(s)	1618
EcoT38I	GRGCYC	1 cut(s)	659
ErhI	CCWWGG	4 cut(s)	365, 582, 955, 975
FalI	AAGNNNNNCTT	2 cut(s)	66, 98
FaqI	GGGAC	7 cut(s)	266, 383, 398, 1178, 1342, 1407, 1582
FauI	CCCGC	4 cut(s)	403, 666, 780, 1410
FbaI	TGATCA	2 cut(s)	574, 1350
Fnu4HI	GCNGC	3 cut(s)	439, 782, 830
FokI	GGATG	2 cut(s)	428, 1359
FriOI	GRGCYC	1 cut(s)	659
Fsp4HI	GCNGC	3 cut(s)	439, 782, 830
FspBI	CTAG	3 cut(s)	399, 1055, 1151
GlaI	GCGC	3 cut(s)	269, 1163, 1217
GluI	GCNGC	3 cut(s)	439, 782, 830
GsaI	CCCAGC	2 cut(s)	523, 992
GsuI	CTGGAG	1 cut(s)	290
HaeIII	GGCC	6 cut(s)	389, 508, 626, 657, 829, 994
HapII	CCGG	7 cut(s)	233, 555, 644, 785, 965, 1304, 1566
HgaI	GACGC	5 cut(s)	247, 400, 809, 1307, 1369
HhaI	GCGC	3 cut(s)	270, 1164, 1218
Hin1I	GRCGYC	3 cut(s)	239, 411, 847
Hin6I	GCGC	3 cut(s)	268, 1162, 1216
HinP1I	GCGC	3 cut(s)	268, 1162, 1216
HincII	GTYRAC	6 cut(s)	591, 601, 641, 1021, 1099, 1173
HindII	GTYRAC	6 cut(s)	591, 601, 641, 1021, 1099, 1173
HinfI	GANTC	5 cut(s)	216, 312, 597, 891, 944
HpaI	GTTAAC	1 cut(s)	1099
HpaII	CCGG	7 cut(s)	233, 555, 644, 785, 965, 1304, 1566
HphI	GGTGA	6 cut(s)	475, 809, 901, 1100, 1271, 1438
Hpy188I	TCNGA	9 cut(s)	352, 672, 711, 866, 943, 1000, 1036, 1147, 1359
Hpy188III	TCNNGA	5 cut(s)	125, 325, 1529, 1555, 1679
Hpy99I	CGWCG	5 cut(s)	241, 849, 852, 1301, 1312
HpyAV	CCTTC	6 cut(s)	239, 331, 357, 400, 814, 832
HpyCH4V	TGCA	9 cut(s)	13, 103, 427, 470, 1123, 1211, 1452, 1499, 1616
HpyF10VI	GCNNNNNNNGC	5 cut(s)	395, 781, 884, 1064, 1488
HpyF3I	CTNAG	2 cut(s)	999, 1035
Hsp92I	GRCGYC	3 cut(s)	239, 411, 847
HspAI	GCGC	3 cut(s)	268, 1162, 1216
KflI	GGGWCCC	1 cut(s)	370
KpnI	GGTACC	1 cut(s)	571
Ksp22I	TGATCA	2 cut(s)	574, 1350
KspAI	GTTAAC	1 cut(s)	1099
LmnI	GCTCC	3 cut(s)	711, 1072, 1642
Lsp1109I	GCAGC	1 cut(s)	793
LweI	GCATC	6 cut(s)	450, 1054, 1093, 1220, 1459, 1625
MaeI	CTAG	3 cut(s)	399, 1055, 1151
MaeIII	GTNAC	7 cut(s)	4, 325, 797, 1048, 1259, 1377, 1573
MboII	GAAGA	6 cut(s)	86, 199, 886, 895, 898, 1555
MfeI	CAATTG	1 cut(s)	833
MhlI	GDGCHC	3 cut(s)	98, 429, 659
MluCI	AATT	8 cut(s)	337, 680, 742, 804, 833, 867, 899, 1179
MlyI	GAGTC	1 cut(s)	606
MmeI	TCCRAC	1 cut(s)	314
Mph1103I	ATGCAT	1 cut(s)	1618
MroXI	GAANNNNTTC	3 cut(s)	357, 1292, 1550
MseI	TTAA	3 cut(s)	1098, 1178, 1443
MslI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
MspA1I	CMGCKG	1 cut(s)	1417
MspI	CCGG	7 cut(s)	233, 555, 644, 785, 965, 1304, 1566
MspR9I	CCNGG	7 cut(s)	285, 308, 555, 556, 1566, 1567, 1647
MunI	CAATTG	1 cut(s)	833
Mva1269I	GAATGC	2 cut(s)	1045, 1618
MvaI	CCWGG	3 cut(s)	285, 308, 1647
MvnI	CGCG	4 cut(s)	1162, 1164, 1216, 1286
MwoI	GCNNNNNNNGC	5 cut(s)	395, 781, 884, 1064, 1488
NciI	CCSGG	4 cut(s)	555, 556, 1566, 1567
NcoI	CCATGG	1 cut(s)	582
NmeAIII	GCCGAG	1 cut(s)	514
NmuCI	GTSAC	4 cut(s)	325, 797, 1259, 1573
NsiI	ATGCAT	1 cut(s)	1618
NspI	RCATGY	1 cut(s)	199
NspV	TTCGAA	1 cut(s)	1410
OliI	CACNNNNGTG	1 cut(s)	1010
PcsI	WCGNNNNNNNCGW	4 cut(s)	321, 1166, 1407, 1616
PctI	GAATGC	2 cut(s)	1045, 1618
PdmI	GAANNNNTTC	3 cut(s)	357, 1292, 1550
PfeI	GAWTC	4 cut(s)	216, 312, 891, 944
PflMI	CCANNNNNTGG	1 cut(s)	1672
PinAI	ACCGGT	1 cut(s)	964
PkrI	GCNGC	3 cut(s)	440, 783, 831
PleI	GAGTC	1 cut(s)	605
PmaCI	CACGTG	2 cut(s)	934, 1502
PmlI	CACGTG	2 cut(s)	934, 1502
PpsI	GAGTC	1 cut(s)	605
Ppu21I	YACGTR	3 cut(s)	934, 1502, 1654
PpuMI	RGGWCCY	1 cut(s)	370
PshAI	GACNNNNGTC	1 cut(s)	596
Psp1406I	AACGTT	2 cut(s)	1175, 1548
Psp5II	RGGWCCY	1 cut(s)	370
Psp6I	CCWGG	3 cut(s)	283, 306, 1645
PspCI	CACGTG	2 cut(s)	934, 1502
PspEI	GGTNACC	1 cut(s)	1259
PspFI	CCCAGC	2 cut(s)	519, 988
PspGI	CCWGG	3 cut(s)	283, 306, 1645
PspOMI	GGGCCC	1 cut(s)	655
PspPI	GGNCC	9 cut(s)	287, 370, 506, 516, 624, 655, 656, 992, 1329
PspPPI	RGGWCCY	1 cut(s)	370
PsrI	GAACNNNNNNTAC	2 cut(s)	551, 583
PstNI	CAGNNNCTG	1 cut(s)	284
RsaI	GTAC	8 cut(s)	200, 259, 569, 843, 1187, 1238, 1244, 1658
RsaNI	GTAC	8 cut(s)	199, 258, 568, 842, 1186, 1237, 1243, 1657
RseI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
SaqAI	TTAA	3 cut(s)	1098, 1178, 1443
SatI	GCNGC	3 cut(s)	439, 782, 830
Sau96I	GGNCC	9 cut(s)	287, 370, 506, 516, 624, 655, 656, 992, 1329
SchI	GAGTC	1 cut(s)	606
ScrFI	CCNGG	7 cut(s)	285, 308, 555, 556, 1566, 1567, 1647
SduI	GDGCHC	3 cut(s)	98, 429, 659
SfaNI	GCATC	6 cut(s)	450, 1054, 1093, 1220, 1459, 1625
SfcI	CTRYAG	1 cut(s)	1512
SfuI	TTCGAA	1 cut(s)	1410
SgrAI	CRCCGGYG	1 cut(s)	1303
SinI	GGWCC	4 cut(s)	287, 370, 516, 1329
SmaI	CCCGGG	2 cut(s)	556, 1567
SmiMI	CAYNNNNRTG	4 cut(s)	200, 1010, 1232, 1611
Sse9I	AATT	8 cut(s)	337, 680, 742, 804, 833, 867, 899, 1179
SsiI	CCGC	9 cut(s)	71, 396, 438, 486, 538, 659, 773, 830, 1417
SspI	AATATT	1 cut(s)	791
SspMI	CTAG	3 cut(s)	399, 1055, 1151
StyD4I	CCNGG	7 cut(s)	283, 306, 553, 554, 1564, 1565, 1645
StyI	CCWWGG	4 cut(s)	365, 582, 955, 975
TasI	AATT	8 cut(s)	337, 680, 742, 804, 833, 867, 899, 1179
TatI	WGTACW	1 cut(s)	198
TauI	GCSGC	2 cut(s)	441, 832
TfiI	GAWTC	4 cut(s)	216, 312, 891, 944
Tru1I	TTAA	3 cut(s)	1098, 1178, 1443
Tru9I	TTAA	3 cut(s)	1098, 1178, 1443
TscAI	CASTG	2 cut(s)	249, 1261
TseFI	GTSAC	4 cut(s)	325, 797, 1259, 1573
TseI	GCWGC	1 cut(s)	781
Tsp45I	GTSAC	4 cut(s)	325, 797, 1259, 1573
TspDTI	ATGAA	5 cut(s)	54, 218, 462, 755, 1469
TspGWI	ACGGA	4 cut(s)	1059, 1158, 1325, 1365
TspMI	CCCGGG	2 cut(s)	554, 1565
TspRI	CASTG	2 cut(s)	249, 1261
Van91I	CCANNNNNTGG	1 cut(s)	1672
VneI	GTGCAC	1 cut(s)	425
VpaK11BI	GGWCC	4 cut(s)	287, 370, 516, 1329
XapI	RAATTY	3 cut(s)	680, 742, 899
XceI	RCATGY	1 cut(s)	199
XmaI	CCCGGG	2 cut(s)	554, 1565
XmnI	GAANNNNTTC	3 cut(s)	357, 1292, 1550
XspI	CTAG	3 cut(s)	399, 1055, 1151
ZraI	GACGTC	1 cut(s)	848
Zsp2I	ATGCAT	1 cut(s)	1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.