Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006317.1

Orthogroup ID

OG0006174

Physical Location & Seq

Genomic Coordinates Forward (+)

935 .. 3840

Gene Structure 2906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006317.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

atggttagtatgcagataattctgttggcttcagctcttctggtttttggggtgtttatgaattcttcatgggcagaagacaagcttgtaaatctgaccaggttgcagatgtttgtggatgatctacctgacatgcccaggatccaaggctttgaggttgtcaatggcgttccaaaacccaggtcattcaagattggcatgtacgagaagaaatggaaattccacagagacctaccggcatcgacggtgtacgccttcggtacaagcaagcgcacagcaactgtccctggtccaacaatcgaggccctccatgggatttccaccttcattaggtggcaaaacaatatccattcaaccaaacacatcctcccttgggaccccaccattccgacagccctagcttccaccaagaagggcattcccaccgtggtgcacctacacggcgccatcggtgaacccgagagtgacggaaatgcaaacgcatggttcaccaagaaattcggagaccgtggtcccacttggtcaaagaaaacatatcgctacattaatcagcaacagcccggaaacttatggtatcatgaccatgccatggggttgaccagagtcaacctcctggccggtttgctcggggcctatatcattcggaatccagatgttgagggcccgctcggacttcctcacggtgaatttgatcgtacgttggtggttttcgatcgtgcatttagcaccgatggttcgatatacatggatcccacaggaaacaatccctccatacacccacaatggcagccggagtactttggcgacgcgattattgtaaacggaaaggcatggccaaagttgaccgtacgacgtcgtaaatacaggttccgaatcatcaatgccagcaatgcaagattcttcaaattctccttcaccaacgggctgagattcatccacgtgggagctgactcagcgtacctaggaaaacctgttgccagcagggacattttagtggggccatctgagatcactgacgtggtagttgacttttcagagtcaaagactaacgatgctatcctagccaacgacgcagcgtatccttaccccagcggcgacccggtcaacgaagccaacagcaaggtcatgaagttttggattctcggccactcagaggttgacacgtcgcgcattccggagaagcttatccactaccctgctcctgatttatccactgcttcgcagactcgctacatcgccatgtacgagtacactagcgacattgatgagccgacgcatctgtatctgaatgccaaaccctacgaggctccggcgacagagaccccgaaagcggggacgacggagatttggaacgtgatcaatctgacggaggacaatcacccgctgcacattcaccttgggttgtttgttgtactggatcagactgacttcgaggaggccggcatggaggagttcaaagattgcatgactaagctaaacgacgctgtcaagtgccagataagcaagtatgcacgtggcaacaagacggaggtgccagcttacgagaaggggtggaagaacgttttcaagatgagacctagtgctgtgacaaaaattctggtcagatttgcttacatacattcgaatgcatcctatgaattcgacccgactgccgagcctggttacgtataccattgccatatcttagatcatgaagacaatgcgatgatgagaccattgaaaataatccgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009888 GO:0009987 GO:0009991 GO:0010073 GO:0012505 GO:0016020 GO:0016036 GO:0016491 GO:0016679 GO:0016682 GO:0016722 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856 GO:0050896 GO:0051716 GO:0052716 GO:0055114 GO:0071496 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

577

Amino Acids

65.17

Weight (kDa)

7.08

Isoelectric Point (pI)

35.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23010 AT1G71040
fragaria_vesca	FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270 FvH4_4g32270
malus_domestica	MD13G1026500.v1.1 MD13G1026600.v1.1 MD16G1029700.v1.1
prunus_persica	Prupe.1G323200_v2.0.a1 Prupe.1G323200_v2.0.a1
pyrus_communis	pycom13g02510 pycom13g02520
rosa_chinensis	RchiOBHm_Chr4g0441061
rosa_laevigata	RLG00000006123
rosa_multiflora	Rmu_sc0004609.1_g000002 Rmu_sc0006317.1_g000001 Rmu_sc0035661.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381980
rosa_rugosa	Rorug04G0330500
rosa_samantha	Rh4AG382200 Rh4BG395800 Rh4CG410900 Rh4DG388900
rosa_wichuraiana	Rw4G032980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	856
AccB1I	GGYRCC	2 cut(s)	443, 1531
AccB7I	CCANNNNNTGG	1 cut(s)	589
AccBSI	CCGCTC	1 cut(s)	667
AccI	GTMKAC	1 cut(s)	1668
AccII	CGCG	2 cut(s)	809, 1168
AccIII	TCCGGA	1 cut(s)	1174
AciI	CCGC	4 cut(s)	665, 1092, 1331, 1382
AclI	AACGTT	1 cut(s)	1560
AclWI	GGATC	5 cut(s)	136, 149, 743, 756, 1425
AcoI	YGGCCR	3 cut(s)	615, 833, 1144
AcsI	RAATTY	7 cut(s)	61, 218, 497, 686, 905, 1593, 1637
AcuI	CTGAAG	1 cut(s)	15
AcvI	CACGTG	2 cut(s)	940, 1514
AcyI	GRCGYC	2 cut(s)	444, 853
AfiI	CCNNNNNNNGG	7 cut(s)	312, 330, 373, 589, 1153, 1330, 1331
AflIII	ACRYGT	1 cut(s)	1161
AgsI	TTSAA	6 cut(s)	190, 354, 904, 1456, 1567, 1720
AjiI	CACGTC	2 cut(s)	1018, 1164
AjnI	CCWGG	6 cut(s)	98, 137, 179, 286, 612, 1657
AleI	CACNNNNGTG	2 cut(s)	428, 1016
AluBI	AGCT	7 cut(s)	35, 85, 401, 947, 1183, 1474, 1538
AluI	AGCT	7 cut(s)	35, 85, 401, 947, 1183, 1474, 1538
Alw21I	GWGCWC	1 cut(s)	435
Alw26I	GTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
Alw44I	GTGCAC	1 cut(s)	431
AlwI	GGATC	5 cut(s)	136, 149, 743, 756, 1425
AlwNI	CAGNNNCTG	1 cut(s)	281
Ama87I	CYCGRG	2 cut(s)	458, 626
Aor13HI	TCCGGA	1 cut(s)	1174
AoxI	GGCC	8 cut(s)	303, 615, 630, 661, 833, 998, 1144, 1437
ApaI	GGGCCC	1 cut(s)	665
ApaLI	GTGCAC	1 cut(s)	431
ApeKI	GCWGC	3 cut(s)	787, 1073, 1384
ApoI	RAATTY	7 cut(s)	61, 218, 497, 686, 905, 1593, 1637
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
AseI	ATTAAT	1 cut(s)	546
Asp700I	GAANNNNTTC	1 cut(s)	1562
AspA2I	CCTAGG	1 cut(s)	961
AspLEI	GCGC	3 cut(s)	273, 446, 1170
AspS9I	GGNCC	8 cut(s)	290, 304, 376, 512, 630, 661, 662, 998
AsuC2I	CCSGG	2 cut(s)	561, 1100
AsuHPI	GGTGA	6 cut(s)	464, 481, 695, 907, 1370, 1385
AsuII	TTCGAA	1 cut(s)	1622
AvaI	CYCGRG	2 cut(s)	458, 626
AvaII	GGWCC	3 cut(s)	290, 376, 512
AvrII	CCTAGG	1 cut(s)	961
BaeGI	GKGCMC	2 cut(s)	435, 665
BalI	TGGCCA	1 cut(s)	835
BamHI	GGATCC	2 cut(s)	141, 748
BanI	GGYRCC	2 cut(s)	443, 1531
BanII	GRGCYC	1 cut(s)	665
BbrPI	CACGTG	2 cut(s)	940, 1514
BbsI	GAAGAC	2 cut(s)	84, 1701
Bbv12I	GWGCWC	1 cut(s)	435
BbvI	GCAGC	3 cut(s)	799, 1085, 1371
BccI	CCATC	3 cut(s)	455, 725, 1009
BceAI	ACGGC	1 cut(s)	457
BcgI	CGANNNNNNTGC	2 cut(s)	1631, 1665
BciT130I	CCWGG	6 cut(s)	100, 139, 181, 288, 614, 1659
BciVI	GTATCC	1 cut(s)	1089
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	2 cut(s)	561, 1100
BcoDI	GTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BfaI	CTAG	5 cut(s)	398, 962, 1061, 1254, 1578
BfoI	RGCGCY	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	1089
BisI	GCNGC	4 cut(s)	788, 1074, 1093, 1385
BlnI	CCTAGG	1 cut(s)	961
BlsI	GCNGC	4 cut(s)	789, 1075, 1094, 1386
BmcAI	AGTACT	1 cut(s)	797
Bme1390I	CCNGG	8 cut(s)	100, 139, 181, 288, 561, 614, 1100, 1659
Bme18I	GGWCC	3 cut(s)	290, 376, 512
BmeT110I	CYCGRG	2 cut(s)	458, 626
BmgBI	CACGTC	2 cut(s)	1018, 1164
BmgT120I	GGNCC	8 cut(s)	290, 304, 376, 512, 630, 661, 662, 998
BmrFI	CCNGG	8 cut(s)	100, 139, 181, 288, 561, 614, 1100, 1659
BmsI	GCATC	4 cut(s)	248, 1042, 1285, 1637
BoxI	GACNNNNGTC	2 cut(s)	510, 602
BpiI	GAAGAC	2 cut(s)	84, 1701
BplI	GAGNNNNNCTC	2 cut(s)	594, 626
Bpu14I	TTCGAA	1 cut(s)	1622
BpuMI	CCSGG	2 cut(s)	561, 1100
BsaAI	YACGTR	3 cut(s)	940, 1514, 1666
BsaHI	GRCGYC	2 cut(s)	444, 853
BsaI	GGTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BsaWI	WCCGGW	1 cut(s)	1174
BsaXI	ACNNNNNCTCC	4 cut(s)	351, 381, 752, 782
Bsc4I	CCNNNNNNNGG	7 cut(s)	312, 330, 373, 589, 1153, 1330, 1331
Bse118I	RCCGGY	3 cut(s)	235, 617, 1439
Bse1I	ACTGG	1 cut(s)	1419
Bse3DI	GCAATG	2 cut(s)	895, 1672
BseAI	TCCGGA	1 cut(s)	1174
BseBI	CCWGG	6 cut(s)	100, 139, 181, 288, 614, 1659
BseGI	GGATG	4 cut(s)	124, 363, 933, 1628
BseLI	CCNNNNNNNGG	7 cut(s)	312, 330, 373, 589, 1153, 1330, 1331
BseMI	GCAATG	2 cut(s)	895, 1672
BseMII	CTCAG	4 cut(s)	917, 966, 996, 1164
BseNI	ACTGG	1 cut(s)	1419
BseRI	GAGGAG	2 cut(s)	1448, 1463
BseSI	GKGCMC	2 cut(s)	435, 665
BseXI	GCAGC	3 cut(s)	799, 1085, 1371
BseYI	CCCAGC	1 cut(s)	1088
BsgI	GTGCAG	1 cut(s)	1370
Bsh1236I	CGCG	2 cut(s)	809, 1168
Bsh1285I	CGRYCG	1 cut(s)	715
BshFI	GGCC	8 cut(s)	305, 617, 632, 663, 835, 1000, 1146, 1439
BshNI	GGYRCC	2 cut(s)	443, 1531
BsiEI	CGRYCG	1 cut(s)	715
BsiHKAI	GWGCWC	1 cut(s)	435
BsiHKCI	CYCGRG	2 cut(s)	458, 626
BsiSI	CCGG	8 cut(s)	236, 561, 618, 791, 1100, 1175, 1310, 1440
BsiWI	CGTACG	2 cut(s)	695, 847
BslFI	GGGAC	5 cut(s)	269, 389, 498, 998, 1348
BslI	CCNNNNNNNGG	7 cut(s)	312, 330, 373, 589, 1153, 1330, 1331
BsmAI	GTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BsmFI	GGGAC	5 cut(s)	269, 389, 498, 998, 1348
BsmI	GAATGC	4 cut(s)	417, 1170, 1294, 1630
BsnI	GGCC	8 cut(s)	305, 617, 632, 663, 835, 1000, 1146, 1439
Bso31I	GGTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BsoBI	CYCGRG	2 cut(s)	458, 626
Bsp119I	TTCGAA	1 cut(s)	1622
Bsp120I	GGGCCC	1 cut(s)	661
Bsp1286I	GDGCHC	2 cut(s)	435, 665
Bsp13I	TCCGGA	1 cut(s)	1174
Bsp143I	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
Bsp19I	CCATGG	2 cut(s)	310, 588
BspACI	CCGC	4 cut(s)	665, 1092, 1331, 1382
BspANI	GGCC	8 cut(s)	305, 617, 632, 663, 835, 1000, 1146, 1439
BspCNI	CTCAG	4 cut(s)	918, 965, 997, 1163
BspEI	TCCGGA	1 cut(s)	1174
BspFNI	CGCG	2 cut(s)	809, 1168
BspHI	TCATGA	3 cut(s)	577, 1125, 1690
BspPI	GGATC	5 cut(s)	136, 149, 743, 756, 1425
BspQI	GCTCTTC	1 cut(s)	42
BspT104I	TTCGAA	1 cut(s)	1622
BspT107I	GGYRCC	2 cut(s)	443, 1531
BspTNI	GGTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BsrBI	CCGCTC	1 cut(s)	667
BsrDI	GCAATG	2 cut(s)	895, 1672
BsrFI	RCCGGY	3 cut(s)	235, 617, 1439
BsrI	ACTGG	1 cut(s)	1419
BssAI	RCCGGY	3 cut(s)	235, 617, 1439
BssMI	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
BssNAI	GTATAC	1 cut(s)	1669
BssNI	GRCGYC	2 cut(s)	444, 853
BssT1I	CCWWGG	6 cut(s)	145, 310, 371, 588, 961, 1396
Bst1107I	GTATAC	1 cut(s)	1669
Bst2UI	CCWGG	6 cut(s)	100, 139, 181, 288, 614, 1659
Bst4CI	ACNGT	6 cut(s)	247, 283, 427, 509, 683, 847
Bst6I	CTCTTC	1 cut(s)	42
BstACI	GRCGYC	2 cut(s)	444, 853
BstBAI	YACGTR	3 cut(s)	940, 1514, 1666
BstBI	TTCGAA	1 cut(s)	1622
BstC8I	GCNNGC	6 cut(s)	269, 665, 886, 979, 1441, 1536
BstDEI	CTNAG	6 cut(s)	926, 952, 1005, 1150, 1470, 1684
BstDSI	CCRYGG	4 cut(s)	310, 426, 508, 588
BstENI	CCTNNNNNAGG	1 cut(s)	328
BstF5I	GGATG	4 cut(s)	124, 363, 933, 1628
BstFNI	CGCG	2 cut(s)	809, 1168
BstH2I	RGCGCY	1 cut(s)	447
BstHHI	GCGC	3 cut(s)	273, 446, 1170
BstKTI	GATC	9 cut(s)	124, 144, 694, 715, 751, 1011, 1359, 1420, 1690
BstMAI	GTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
BstMBI	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
BstMCI	CGRYCG	1 cut(s)	715
BstMWI	GCNNNNNNNGC	5 cut(s)	890, 953, 1061, 1070, 1500
BstNI	CCWGG	6 cut(s)	100, 139, 181, 288, 614, 1659
BstNSI	RCATGY	2 cut(s)	136, 202
BstPAI	GACNNNNGTC	2 cut(s)	510, 602
BstSCI	CCNGG	8 cut(s)	98, 137, 179, 286, 559, 612, 1098, 1657
BstSLI	GKGCMC	2 cut(s)	435, 665
BstSNI	TACGTA	1 cut(s)	1666
BstUI	CGCG	2 cut(s)	809, 1168
BstV1I	GCAGC	3 cut(s)	799, 1085, 1371
BstV2I	GAAGAC	2 cut(s)	84, 1701
BstX2I	RGATCY	2 cut(s)	141, 748
BstYI	RGATCY	2 cut(s)	141, 748
BstZ17I	GTATAC	1 cut(s)	1669
BsuI	GTATCC	1 cut(s)	1089
BsuRI	GGCC	8 cut(s)	305, 617, 632, 663, 835, 1000, 1146, 1439
BtgI	CCRYGG	4 cut(s)	310, 426, 508, 588
BtgZI	GCGATG	2 cut(s)	1219, 1718
BtrI	CACGTC	2 cut(s)	1018, 1164
BtsCI	GGATG	4 cut(s)	124, 363, 933, 1628
BtsI	GCAGTG	1 cut(s)	1212
BtsIMutI	CAGTG	2 cut(s)	1011, 1212
Cac8I	GCNNGC	6 cut(s)	269, 665, 886, 979, 1441, 1536
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	3 cut(s)	577, 1125, 1690
CfoI	GCGC	3 cut(s)	273, 446, 1170
Cfr10I	RCCGGY	3 cut(s)	235, 617, 1439
Cfr13I	GGNCC	8 cut(s)	290, 304, 376, 512, 630, 661, 662, 998
CseI	GACGC	4 cut(s)	815, 1079, 1282, 1490
CsiI	ACCWGGT	1 cut(s)	98
DdeI	CTNAG	6 cut(s)	926, 952, 1005, 1150, 1470, 1684
DinI	GGCGCC	1 cut(s)	445
DpnI	GATC	9 cut(s)	123, 143, 693, 714, 750, 1010, 1358, 1419, 1689
DpnII	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
EaeI	YGGCCR	3 cut(s)	615, 833, 1144
Eam1104I	CTCTTC	1 cut(s)	42
EarI	CTCTTC	1 cut(s)	42
Eco105I	TACGTA	1 cut(s)	1666
Eco130I	CCWWGG	6 cut(s)	145, 310, 371, 588, 961, 1396
Eco24I	GRGCYC	1 cut(s)	665
Eco31I	GGTCTC	5 cut(s)	222, 498, 1313, 1567, 1705
Eco47I	GGWCC	3 cut(s)	290, 376, 512
Eco57I	CTGAAG	1 cut(s)	15
Eco72I	CACGTG	2 cut(s)	940, 1514
Eco88I	CYCGRG	2 cut(s)	458, 626
EcoNI	CCTNNNNNAGG	1 cut(s)	328
EcoO109I	RGGNCCY	4 cut(s)	304, 376, 630, 661
EcoRI	GAATTC	2 cut(s)	61, 1637
EcoRII	CCWGG	6 cut(s)	98, 137, 179, 286, 612, 1657
EcoT14I	CCWWGG	6 cut(s)	145, 310, 371, 588, 961, 1396
EcoT22I	ATGCAT	1 cut(s)	1630
EcoT38I	GRGCYC	1 cut(s)	665
EgeI	GGCGCC	1 cut(s)	445
EheI	GGCGCC	1 cut(s)	445
ErhI	CCWWGG	6 cut(s)	145, 310, 371, 588, 961, 1396
FalI	AAGNNNNNCTT	2 cut(s)	69, 101
FaqI	GGGAC	5 cut(s)	269, 389, 498, 998, 1348
FauI	CCCGC	3 cut(s)	672, 1324, 1389
FbaI	TGATCA	1 cut(s)	1356
FblI	GTMKAC	1 cut(s)	1668
Fnu4HI	GCNGC	4 cut(s)	788, 1074, 1093, 1385
FokI	GGATG	4 cut(s)	131, 350, 920, 1615
FriOI	GRGCYC	1 cut(s)	665
Fsp4HI	GCNGC	4 cut(s)	788, 1074, 1093, 1385
FspBI	CTAG	5 cut(s)	398, 962, 1061, 1254, 1578
GlaI	GCGC	3 cut(s)	272, 445, 1169
GluI	GCNGC	4 cut(s)	788, 1074, 1093, 1385
GsaI	CCCAGC	1 cut(s)	1092
HaeII	RGCGCY	1 cut(s)	447
HaeIII	GGCC	8 cut(s)	305, 617, 632, 663, 835, 1000, 1146, 1439
HapII	CCGG	8 cut(s)	236, 561, 618, 791, 1100, 1175, 1310, 1440
HgaI	GACGC	4 cut(s)	815, 1079, 1282, 1490
HhaI	GCGC	3 cut(s)	273, 446, 1170
Hin1I	GRCGYC	2 cut(s)	444, 853
Hin6I	GCGC	3 cut(s)	271, 444, 1168
HinP1I	GCGC	3 cut(s)	271, 444, 1168
HincII	GTYRAC	6 cut(s)	597, 607, 843, 1027, 1105, 1159
HindII	GTYRAC	6 cut(s)	597, 607, 843, 1027, 1105, 1159
HindIII	AAGCTT	2 cut(s)	83, 1181
HinfI	GANTC	9 cut(s)	603, 646, 873, 897, 930, 950, 1037, 1138, 1225
HpaII	CCGG	8 cut(s)	236, 561, 618, 791, 1100, 1175, 1310, 1440
HphI	GGTGA	6 cut(s)	464, 481, 695, 907, 1370, 1385
Hpy188III	TCNNGA	8 cut(s)	190, 578, 650, 1126, 1175, 1202, 1567, 1691
Hpy99I	CGWCG	9 cut(s)	247, 809, 855, 858, 1073, 1168, 1276, 1342, 1484
HpyAV	CCTTC	5 cut(s)	265, 334, 406, 922, 1540
HpyCH4III	ACNGT	6 cut(s)	247, 283, 427, 509, 683, 847
HpyCH4IV	ACGT	9 cut(s)	698, 853, 939, 1017, 1163, 1353, 1513, 1560, 1665
HpyF10VI	GCNNNNNNNGC	5 cut(s)	890, 953, 1061, 1070, 1500
HpyF3I	CTNAG	6 cut(s)	926, 952, 1005, 1150, 1470, 1684
HpySE526I	ACGT	9 cut(s)	698, 853, 939, 1017, 1163, 1353, 1513, 1560, 1665
Hsp92I	GRCGYC	2 cut(s)	444, 853
HspAI	GCGC	3 cut(s)	271, 444, 1168
KasI	GGCGCC	1 cut(s)	443
KflI	GGGWCCC	1 cut(s)	376
Kpn2I	TCCGGA	1 cut(s)	1174
KroI	GCCGGC	1 cut(s)	1439
KroNI	GCCGGC	1 cut(s)	1441
Ksp22I	TGATCA	1 cut(s)	1356
Kzo9I	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	3 cut(s)	944, 1204, 1312
Lsp1109I	GCAGC	3 cut(s)	799, 1085, 1371
LweI	GCATC	4 cut(s)	248, 1042, 1285, 1637
MabI	ACCWGGT	1 cut(s)	98
MaeI	CTAG	5 cut(s)	398, 962, 1061, 1254, 1578
MaeII	ACGT	9 cut(s)	698, 853, 939, 1017, 1163, 1353, 1513, 1560, 1665
MaeIII	GTNAC	3 cut(s)	464, 1585, 1661
MalI	GATC	9 cut(s)	123, 143, 693, 714, 750, 1010, 1358, 1419, 1689
MbiI	CCGCTC	1 cut(s)	667
MboI	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
MboII	GAAGA	7 cut(s)	29, 57, 89, 220, 892, 1567, 1706
MflI	RGATCY	2 cut(s)	141, 748
MhlI	GDGCHC	2 cut(s)	435, 665
MlsI	TGGCCA	1 cut(s)	835
MluCI	AATT	8 cut(s)	18, 61, 218, 497, 686, 905, 1593, 1637
MluNI	TGGCCA	1 cut(s)	835
Mly113I	GGCGCC	1 cut(s)	444
MlyI	GAGTC	4 cut(s)	612, 944, 1046, 1219
MmeI	TCCRAC	2 cut(s)	317, 413
Mox20I	TGGCCA	1 cut(s)	835
Mph1103I	ATGCAT	1 cut(s)	1630
MroI	TCCGGA	1 cut(s)	1174
MroNI	GCCGGC	1 cut(s)	1439
MroXI	GAANNNNTTC	1 cut(s)	1562
MscI	TGGCCA	1 cut(s)	835
MseI	TTAA	1 cut(s)	546
MslI	CAYNNNNRTG	7 cut(s)	428, 582, 938, 992, 1016, 1238, 1623
Msp20I	TGGCCA	1 cut(s)	835
MspA1I	CMGCKG	2 cut(s)	1092, 1384
MspI	CCGG	8 cut(s)	236, 561, 618, 791, 1100, 1175, 1310, 1440
MspR9I	CCNGG	8 cut(s)	100, 139, 181, 288, 561, 614, 1100, 1659
Mva1269I	GAATGC	4 cut(s)	417, 1170, 1294, 1630
MvaI	CCWGG	6 cut(s)	100, 139, 181, 288, 614, 1659
MvnI	CGCG	2 cut(s)	809, 1168
MwoI	GCNNNNNNNGC	5 cut(s)	890, 953, 1061, 1070, 1500
NaeI	GCCGGC	1 cut(s)	1441
NarI	GGCGCC	1 cut(s)	444
NciI	CCSGG	2 cut(s)	561, 1100
NcoI	CCATGG	2 cut(s)	310, 588
NdeII	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
NgoMIV	GCCGGC	1 cut(s)	1439
NmeAIII	GCCGAG	2 cut(s)	1122, 1678
NmuCI	GTSAC	2 cut(s)	464, 1585
NsiI	ATGCAT	1 cut(s)	1630
NspI	RCATGY	2 cut(s)	136, 202
NspV	TTCGAA	1 cut(s)	1622
OliI	CACNNNNGTG	2 cut(s)	428, 1016
PagI	TCATGA	3 cut(s)	577, 1125, 1690
PciSI	GCTCTTC	1 cut(s)	42
PcsI	WCGNNNNNNNCGW	2 cut(s)	456, 1242
PctI	GAATGC	4 cut(s)	417, 1170, 1294, 1630
PdiI	GCCGGC	1 cut(s)	1441
PdmI	GAANNNNTTC	1 cut(s)	1562
PfeI	GAWTC	5 cut(s)	646, 873, 897, 930, 1138
Pfl23II	CGTACG	2 cut(s)	695, 847
PflFI	GACNNNGTC	2 cut(s)	1100, 1484
PflMI	CCANNNNNTGG	1 cut(s)	589
PkrI	GCNGC	4 cut(s)	789, 1075, 1094, 1386
Ple19I	CGATCG	1 cut(s)	715
PleI	GAGTC	4 cut(s)	611, 944, 1045, 1219
PluTI	GGCGCC	1 cut(s)	447
PmaCI	CACGTG	2 cut(s)	940, 1514
PmlI	CACGTG	2 cut(s)	940, 1514
PpsI	GAGTC	4 cut(s)	611, 944, 1045, 1219
Ppu21I	YACGTR	3 cut(s)	940, 1514, 1666
PpuMI	RGGWCCY	1 cut(s)	376
PshAI	GACNNNNGTC	2 cut(s)	510, 602
PshBI	ATTAAT	1 cut(s)	546
Psp1406I	AACGTT	1 cut(s)	1560
Psp5II	RGGWCCY	1 cut(s)	376
Psp6I	CCWGG	6 cut(s)	98, 137, 179, 286, 612, 1657
PspCI	CACGTG	2 cut(s)	940, 1514
PspFI	CCCAGC	1 cut(s)	1088
PspGI	CCWGG	6 cut(s)	98, 137, 179, 286, 612, 1657
PspLI	CGTACG	2 cut(s)	695, 847
PspOMI	GGGCCC	1 cut(s)	661
PspPI	GGNCC	8 cut(s)	290, 304, 376, 512, 630, 661, 662, 998
PspPPI	RGGWCCY	1 cut(s)	376
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	2 cut(s)	141, 748
PsyI	GACNNNGTC	2 cut(s)	1100, 1484
PvuI	CGATCG	1 cut(s)	715
RseI	CAYNNNNRTG	7 cut(s)	428, 582, 938, 992, 1016, 1238, 1623
SapI	GCTCTTC	1 cut(s)	42
SaqAI	TTAA	1 cut(s)	546
SatI	GCNGC	4 cut(s)	788, 1074, 1093, 1385
Sau3AI	GATC	9 cut(s)	121, 141, 691, 712, 748, 1008, 1356, 1417, 1687
Sau96I	GGNCC	8 cut(s)	290, 304, 376, 512, 630, 661, 662, 998
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	4 cut(s)	612, 944, 1046, 1219
ScrFI	CCNGG	8 cut(s)	100, 139, 181, 288, 561, 614, 1100, 1659
SduI	GDGCHC	2 cut(s)	435, 665
SexAI	ACCWGGT	1 cut(s)	98
SfaNI	GCATC	4 cut(s)	248, 1042, 1285, 1637
SfoI	GGCGCC	1 cut(s)	445
SfuI	TTCGAA	1 cut(s)	1622
SinI	GGWCC	3 cut(s)	290, 376, 512
SmiMI	CAYNNNNRTG	7 cut(s)	428, 582, 938, 992, 1016, 1238, 1623
SnaBI	TACGTA	1 cut(s)	1666
Sse9I	AATT	8 cut(s)	18, 61, 218, 497, 686, 905, 1593, 1637
SsiI	CCGC	4 cut(s)	665, 1092, 1331, 1382
SspDI	GGCGCC	1 cut(s)	443
SspMI	CTAG	5 cut(s)	398, 962, 1061, 1254, 1578
StyD4I	CCNGG	8 cut(s)	98, 137, 179, 286, 559, 612, 1098, 1657
StyI	CCWWGG	6 cut(s)	145, 310, 371, 588, 961, 1396
TaaI	ACNGT	6 cut(s)	247, 283, 427, 509, 683, 847
TaiI	ACGT	9 cut(s)	701, 856, 942, 1020, 1166, 1356, 1516, 1563, 1668
TaqI	TCGA	7 cut(s)	242, 300, 711, 737, 1431, 1622, 1641
TasI	AATT	8 cut(s)	18, 61, 218, 497, 686, 905, 1593, 1637
TatI	WGTACW	3 cut(s)	795, 1248, 1411
TauI	GCSGC	1 cut(s)	1095
TfiI	GAWTC	5 cut(s)	646, 873, 897, 930, 1138
Tru1I	TTAA	1 cut(s)	546
Tru9I	TTAA	1 cut(s)	546
TscAI	CASTG	2 cut(s)	1018, 1219
TseFI	GTSAC	2 cut(s)	464, 1585
TseI	GCWGC	3 cut(s)	787, 1073, 1384
Tsp45I	GTSAC	2 cut(s)	464, 1585
TspDTI	ATGAA	7 cut(s)	57, 74, 316, 922, 1142, 1650, 1707
TspGWI	ACGGA	6 cut(s)	483, 837, 1355, 1382, 1541, 1718
TspRI	CASTG	2 cut(s)	1018, 1219
Tth111I	GACNNNGTC	2 cut(s)	1100, 1484
Van91I	CCANNNNNTGG	1 cut(s)	589
VneI	GTGCAC	1 cut(s)	431
VpaK11BI	GGWCC	3 cut(s)	290, 376, 512
VspI	ATTAAT	1 cut(s)	546
XagI	CCTNNNNNAGG	1 cut(s)	328
XapI	RAATTY	7 cut(s)	61, 218, 497, 686, 905, 1593, 1637
XceI	RCATGY	2 cut(s)	136, 202
XmaJI	CCTAGG	1 cut(s)	961
XmiI	GTMKAC	1 cut(s)	1668
XmnI	GAANNNNTTC	1 cut(s)	1562
XspI	CTAG	5 cut(s)	398, 962, 1061, 1254, 1578
ZraI	GACGTC	1 cut(s)	854
ZrmI	AGTACT	1 cut(s)	797
Zsp2I	ATGCAT	1 cut(s)	1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.