MD13G1028500.v1.1

Sulfhydryl oxidase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
2031733 .. 2036564
4832 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1028500.v1.1.491

Sequence Viewer

Length: 1545 bp
ATGTCTCCTGCACTTCGCCTTCTGCTTCTGAGCCTCTTTTCGTTCACCTCCGCACTCGCGCCCGCGTCGGCTTCTTCTGCGGCGGGATCGCGCTCGATCCTCCGCGCTGTCAACGACGACAACGCTGATGTTCGAGACTTTGCCGTCGATTTGAACGCCAGCAGCTTCGATGCAGTCCTCAGCGACACCCCTGCCTCCTTTGCCGTAGTCGAATTCTTCGCTCACTGGTGTCCGGCTTGCAGAAATTACAAGCCCCATTACGAAAAGGTTGCTAGGCTTTTCAATGGACCTGATGCTGTGCATCCAGGGATGGTTTTGATGACCAGGGTGGACTGTGCATCGAAGGTAAATACCAAACTCTGCGATAACTTTTCTGTCGGTCATTATCCTATGCTGCTTTGGGGACCTCCATCTAAATTTGTATCTGCTAGTTGGGAACCTAATCAAGCAAAAAGTGATATACGTTTAATTGACAATGGACGTACAGCTGATCGGTTGCTTAGTTGGATCAACAAGCAATTGGGCAGCTCTTTCAGCTTGGATGATCAGAAATTTGAAAATGAGCATATTTCGTCAAATGCGTCTGACCCCGAACAGATTGCTCGGGCTGTGTATGATGTTGAGGAAGCAACATCAACTGCTTTTGAAATCATCTTAGAGCACAAGATGATCAAATCAAAAACACGGGCTTCGCTAGTAAAATTTCTTCAACTTTTGGTCGCTCATCATCCCTCCAGGAGGTGCCGAAAGGGAAGTGCGGAGGTGCTTGTGAATTTTGATGATTTGTACCCGCTAGATATCTTGGCAGCTGACAGGCAGGGAGACCAAGATGTACAGGCGGCCTTGCAGAAATTTCAGATTTGTGGTAAAGATGTTCCTCGTGGATATTGGATGTTTTGCCGTGGCAGCAAAAATGATACCAGGGGCTTTAGCTGTGGGTTATGGGTTCTTCTGCATTCACTTTCAGTGAGAATTGAGGATGGAGAAAGCAACTTTGCGTTCACCACTATATGTGATTTTGTGCACAATTTCTTCGTCTGTGAGGAATGTCGCCAACATTTTTATGATATGTGTTCAAGTGTTTCTAGTCCTTTCAACAAATCCCGTGACTTTGTGCTTTGGCTGTGGAGTGCTCACAATAAAGTCAATGAGAGATTAATTAAAGAGGAATCCTCTTTAGGAACTGCTGATCCGAAATTCCCAAAGATGATTTGGCCTCCAAGGCAGCTTTGTCCTTCTTGTTACCTTTCCTCGAGCCAGAAAAACAACGAAATTGATTGGCACAAGGATGAGGTGTTCAAAATTTTGACCAGTTATTACGGGAAAACCCTTGTTTCTCTTTACAAAGATAAGGGTATTGTTGGGAATGATGAGACTAGTGGGGCTCTTGAAGACTTGGTACCCTCAACAAATGCGCTTGTGGTGCCTCTTGGGGCTGCGTTGGCTATTGCTGTTGCTAGTTGTGCATTCGGAGCACTCGCTTGCTACTGGCGTTCACAGCAGAAGAGTCGGAAGTATTTCCACCACTCTTTAAAGAACATTTGA

Protein Analysis

515

Amino Acids

57.51

Weight (kDa)

6.93

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OST3_OST6 PF04756 46 - 181 2.7e-06 OST3 / OST6 family, transporter family
Thioredoxin PF00085 50 - 141 2.4e-11 Thioredoxin
Evr1_Alr PF04777 312 - 394 1.3e-19 Erv1 / Alr family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
Acc65I GGTACC 1 cut(s) 1399
AccB1I GGYRCC 3 cut(s) 741, 1399, 1423
AccII CGCG 4 cut(s) 59, 65, 91, 105
AciI CCGC 8 cut(s) 51, 63, 80, 83, 103, 758, 791, 839
AclWI GGATC 4 cut(s) 91, 94, 515, 1184
AcsI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
AfaI GTAC 4 cut(s) 484, 788, 834, 1401
AfiI CCNNNNNNNGG 1 cut(s) 738
AgsI TTSAA 9 cut(s) 154, 283, 557, 647, 710, 1077, 1096, 1300, 1391
AhlI ACTAGT 1 cut(s) 1376
AjnI CCWGG 4 cut(s) 304, 323, 734, 920
AloI GAACNNNNNNTCC 4 cut(s) 1174, 1206, 1280, 1312
AluBI AGCT 7 cut(s) 165, 488, 528, 537, 809, 933, 1228
AluI AGCT 7 cut(s) 165, 488, 528, 537, 809, 933, 1228
Alw21I GWGCWC 4 cut(s) 663, 1026, 1135, 1477
Alw26I GTCTC 4 cut(s) 9, 129, 816, 1367
Alw44I GTGCAC 1 cut(s) 1022
AlwI GGATC 4 cut(s) 91, 94, 515, 1184
Ama87I CYCGRG 2 cut(s) 603, 1252
AoxI GGCC 2 cut(s) 840, 1214
ApaLI GTGCAC 1 cut(s) 1022
ApeKI GCWGC 7 cut(s) 162, 394, 525, 806, 906, 1225, 1436
ApoI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
AseI ATTAAT 1 cut(s) 1157
Asp700I GAANNNNTTC 1 cut(s) 1517
Asp718I GGTACC 1 cut(s) 1399
AspLEI GCGC 4 cut(s) 61, 93, 107, 1417
AspS9I GGNCC 2 cut(s) 287, 404
AsuHPI GGTGA 2 cut(s) 37, 994
AvaI CYCGRG 2 cut(s) 603, 1252
AvaII GGWCC 2 cut(s) 287, 404
BaeGI GKGCMC 1 cut(s) 1026
BanI GGYRCC 3 cut(s) 741, 1399, 1423
BanII GRGCYC 1 cut(s) 1387
BarI GAAGNNNNNNTAC 4 cut(s) 690, 722, 1383, 1415
BauI CACGAG 1 cut(s) 879
BbsI GAAGAC 1 cut(s) 1398
Bbv12I GWGCWC 4 cut(s) 663, 1026, 1135, 1477
BbvCI CCTCAGC 1 cut(s) 179
BbvI GCAGC 7 cut(s) 174, 381, 537, 818, 918, 1237, 1423
BccI CCATC 3 cut(s) 304, 418, 974
BceAI ACGGC 3 cut(s) 128, 188, 885
BcgI CGANNNNNNTGC 8 cut(s) 173, 207, 251, 285, 581, 615, 1490, 1524
BciT130I CCWGG 4 cut(s) 306, 325, 736, 922
BclI TGATCA 2 cut(s) 544, 669
BcoDI GTCTC 4 cut(s) 9, 129, 816, 1367
BcuI ACTAGT 1 cut(s) 1376
BfaI CTAG 7 cut(s) 273, 429, 695, 794, 1086, 1377, 1458
BglI GCCNNNNNGGC 1 cut(s) 1222
BisI GCNGC 9 cut(s) 81, 163, 395, 526, 807, 840, 907, 1226, 1437
BlsI GCNGC 9 cut(s) 82, 164, 396, 527, 808, 841, 908, 1227, 1438
Bme1390I CCNGG 4 cut(s) 306, 325, 736, 922
Bme18I GGWCC 2 cut(s) 287, 404
BmeT110I CYCGRG 2 cut(s) 603, 1252
BmgT120I GGNCC 2 cut(s) 287, 404
BmiI GGNNCC 5 cut(s) 405, 438, 743, 1401, 1425
BmrFI CCNGG 4 cut(s) 306, 325, 736, 922
BmsI GCATC 4 cut(s) 160, 283, 310, 347
BpiI GAAGAC 1 cut(s) 1398
BplI GAGNNNNNCTC 2 cut(s) 1157, 1189
BpmI CTGGAG 1 cut(s) 718
Bpu10I CCTNAGC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 816
BsaJI CCNNGG 5 cut(s) 305, 324, 901, 921, 1220
Bsc4I CCNNNNNNNGG 1 cut(s) 738
Bse1I ACTGG 3 cut(s) 230, 1311, 1493
BseBI CCWGG 4 cut(s) 306, 325, 736, 922
BseDI CCNNGG 5 cut(s) 305, 324, 901, 921, 1220
BseGI GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BseLI CCNNNNNNNGG 1 cut(s) 738
BseMII CTCAG 2 cut(s) 20, 193
BseNI ACTGG 3 cut(s) 230, 1311, 1493
BseSI GKGCMC 1 cut(s) 1026
BseXI GCAGC 7 cut(s) 174, 381, 537, 818, 918, 1237, 1423
Bsh1236I CGCG 4 cut(s) 59, 65, 91, 105
BshFI GGCC 2 cut(s) 842, 1216
BshNI GGYRCC 3 cut(s) 741, 1399, 1423
BsiHKAI GWGCWC 4 cut(s) 663, 1026, 1135, 1477
BsiHKCI CYCGRG 2 cut(s) 603, 1252
BsiSI CCGG 1 cut(s) 233
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 1 cut(s) 738
BsmAI GTCTC 4 cut(s) 9, 129, 816, 1367
BsmFI GGGAC 1 cut(s) 417
BsmI GAATGC 2 cut(s) 955, 1466
BsnI GGCC 2 cut(s) 842, 1216
Bso31I GGTCTC 1 cut(s) 816
BsoBI CYCGRG 2 cut(s) 603, 1252
Bsp1286I GDGCHC 5 cut(s) 663, 1026, 1135, 1387, 1477
Bsp1407I TGTACA 1 cut(s) 832
Bsp143I GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BspACI CCGC 8 cut(s) 51, 63, 80, 83, 103, 758, 791, 839
BspANI GGCC 2 cut(s) 842, 1216
BspCNI CTCAG 2 cut(s) 21, 192
BspFNI CGCG 4 cut(s) 59, 65, 91, 105
BspLI GGNNCC 5 cut(s) 405, 438, 743, 1401, 1425
BspPI GGATC 4 cut(s) 91, 94, 515, 1184
BspT107I GGYRCC 3 cut(s) 741, 1399, 1423
BspTNI GGTCTC 1 cut(s) 816
BsrGI TGTACA 1 cut(s) 832
BsrI ACTGG 3 cut(s) 230, 1311, 1493
BssECI CCNNGG 5 cut(s) 305, 324, 901, 921, 1220
BssMI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BssSI CACGAG 1 cut(s) 879
BssT1I CCWWGG 1 cut(s) 1220
Bst2BI CACGAG 1 cut(s) 879
Bst2UI CCWGG 4 cut(s) 306, 325, 736, 922
Bst4CI ACNGT 1 cut(s) 335
Bst6I CTCTTC 1 cut(s) 1499
BstAUI TGTACA 1 cut(s) 832
BstC8I GCNNGC 4 cut(s) 63, 160, 238, 1483
BstDEI CTNAG 4 cut(s) 29, 179, 500, 655
BstDSI CCRYGG 1 cut(s) 901
BstENI CCTNNNNNAGG 1 cut(s) 736
BstF5I GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BstFNI CGCG 4 cut(s) 59, 65, 91, 105
BstHHI GCGC 4 cut(s) 61, 93, 107, 1417
BstKTI GATC 7 cut(s) 89, 99, 493, 510, 547, 672, 1192
BstMAI GTCTC 4 cut(s) 9, 129, 816, 1367
BstMBI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BstNI CCWGG 4 cut(s) 306, 325, 736, 922
BstSCI CCNGG 4 cut(s) 304, 323, 734, 920
BstSLI GKGCMC 1 cut(s) 1026
BstUI CGCG 4 cut(s) 59, 65, 91, 105
BstV1I GCAGC 7 cut(s) 174, 381, 537, 818, 918, 1237, 1423
BstV2I GAAGAC 1 cut(s) 1398
BsuRI GGCC 2 cut(s) 842, 1216
BtgI CCRYGG 1 cut(s) 901
BtsCI GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BtsIMutI CAGTG 2 cut(s) 223, 972
Cac8I GCNNGC 4 cut(s) 63, 160, 238, 1483
CfoI GCGC 4 cut(s) 61, 93, 107, 1417
Cfr13I GGNCC 2 cut(s) 287, 404
CseI GACGC 2 cut(s) 54, 570
Csp6I GTAC 4 cut(s) 483, 787, 833, 1400
CviQI GTAC 4 cut(s) 483, 787, 833, 1400
DdeI CTNAG 4 cut(s) 29, 179, 500, 655
DpnI GATC 7 cut(s) 88, 98, 492, 509, 546, 671, 1191
DpnII GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
DraI TTTAAA 1 cut(s) 1533
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eam1104I CTCTTC 1 cut(s) 1499
EarI CTCTTC 1 cut(s) 1499
Eco130I CCWWGG 1 cut(s) 1220
Eco24I GRGCYC 1 cut(s) 1387
Eco31I GGTCTC 1 cut(s) 816
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 2 cut(s) 287, 404
Eco88I CYCGRG 2 cut(s) 603, 1252
EcoNI CCTNNNNNAGG 1 cut(s) 736
EcoO109I RGGNCCY 1 cut(s) 404
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 4 cut(s) 304, 323, 734, 920
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 1 cut(s) 1220
EcoT38I GRGCYC 1 cut(s) 1387
ErhI CCWWGG 1 cut(s) 1220
FaiI YATR 9 cut(s) 392, 461, 567, 615, 943, 1010, 1012, 1065, 1070
FaqI GGGAC 1 cut(s) 417
FauI CCCGC 3 cut(s) 70, 76, 798
FbaI TGATCA 2 cut(s) 544, 669
Fnu4HI GCNGC 9 cut(s) 81, 163, 395, 526, 807, 840, 907, 1226, 1437
FokI GGATG 7 cut(s) 288, 322, 554, 714, 904, 992, 1301
FriOI GRGCYC 1 cut(s) 1387
Fsp4HI GCNGC 9 cut(s) 81, 163, 395, 526, 807, 840, 907, 1226, 1437
FspBI CTAG 7 cut(s) 273, 429, 695, 794, 1086, 1377, 1458
GlaI GCGC 4 cut(s) 60, 92, 106, 1416
GluI GCNGC 9 cut(s) 81, 163, 395, 526, 807, 840, 907, 1226, 1437
GsuI CTGGAG 1 cut(s) 718
HaeIII GGCC 2 cut(s) 842, 1216
HapII CCGG 1 cut(s) 233
HgaI GACGC 2 cut(s) 54, 570
HhaI GCGC 4 cut(s) 61, 93, 107, 1417
Hin6I GCGC 4 cut(s) 59, 91, 105, 1415
HinP1I GCGC 4 cut(s) 59, 91, 105, 1415
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 2 cut(s) 1169, 1507
HpaII CCGG 1 cut(s) 233
HphI GGTGA 2 cut(s) 37, 994
Hpy166II GTNNAC 6 cut(s) 45, 112, 331, 1002, 1024, 1496
Hpy188I TCNGA 7 cut(s) 30, 549, 586, 858, 1194, 1472, 1512
Hpy188III TCNNGA 2 cut(s) 134, 1388
Hpy8I GTNNAC 6 cut(s) 45, 112, 331, 1002, 1024, 1496
Hpy99I CGWCG 3 cut(s) 70, 119, 149
HpyAV CCTTC 3 cut(s) 29, 337, 1245
HpyCH4III ACNGT 1 cut(s) 335
HpyCH4IV ACGT 2 cut(s) 463, 481
HpyCH4V TGCA 9 cut(s) 11, 173, 240, 301, 338, 847, 955, 1024, 1466
HpyF3I CTNAG 4 cut(s) 29, 179, 500, 655
HpySE526I ACGT 2 cut(s) 463, 481
HspAI GCGC 4 cut(s) 59, 91, 105, 1415
KpnI GGTACC 1 cut(s) 1403
Ksp22I TGATCA 2 cut(s) 544, 669
Kzo9I GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
LmnI GCTCC 1 cut(s) 1472
Lsp1109I GCAGC 7 cut(s) 174, 381, 537, 818, 918, 1237, 1423
LweI GCATC 4 cut(s) 160, 283, 310, 347
MaeI CTAG 7 cut(s) 273, 429, 695, 794, 1086, 1377, 1458
MaeII ACGT 2 cut(s) 463, 481
MaeIII GTNAC 2 cut(s) 1106, 1241
MalI GATC 7 cut(s) 88, 98, 492, 509, 546, 671, 1191
MboI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
MboII GAAGA 7 cut(s) 66, 208, 698, 941, 1024, 1403, 1516
MfeI CAATTG 1 cut(s) 518
MhlI GDGCHC 5 cut(s) 663, 1026, 1135, 1387, 1477
MlyI GAGTC 1 cut(s) 1516
MmeI TCCRAC 2 cut(s) 485, 1490
MroXI GAANNNNTTC 1 cut(s) 1517
MseI TTAA 4 cut(s) 467, 1157, 1161, 1532
MslI CAYNNNNRTG 2 cut(s) 1062, 1287
MspA1I CMGCKG 2 cut(s) 488, 809
MspI CCGG 1 cut(s) 233
MspR9I CCNGG 4 cut(s) 306, 325, 736, 922
MunI CAATTG 1 cut(s) 518
Mva1269I GAATGC 2 cut(s) 955, 1466
MvaI CCWGG 4 cut(s) 306, 325, 736, 922
MvnI CGCG 4 cut(s) 59, 65, 91, 105
NdeII GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
NlaIV GGNNCC 5 cut(s) 405, 438, 743, 1401, 1425
NmuCI GTSAC 1 cut(s) 1106
PacI TTAATTAA 1 cut(s) 1161
PaeR7I CTCGAG 1 cut(s) 1252
PcsI WCGNNNNNNNCGW 1 cut(s) 578
PctI GAATGC 2 cut(s) 955, 1466
PdmI GAANNNNTTC 1 cut(s) 1517
PfeI GAWTC 1 cut(s) 1169
PfoI TCCNGGA 1 cut(s) 734
PkrI GCNGC 9 cut(s) 82, 164, 396, 527, 808, 841, 908, 1227, 1438
PleI GAGTC 1 cut(s) 1515
PpsI GAGTC 1 cut(s) 1515
PpuMI RGGWCCY 1 cut(s) 404
PshBI ATTAAT 1 cut(s) 1157
Psp5II RGGWCCY 1 cut(s) 404
Psp6I CCWGG 4 cut(s) 304, 323, 734, 920
PspGI CCWGG 4 cut(s) 304, 323, 734, 920
PspN4I GGNNCC 5 cut(s) 405, 438, 743, 1401, 1425
PspPI GGNCC 2 cut(s) 287, 404
PspPPI RGGWCCY 1 cut(s) 404
PspXI VCTCGAGB 1 cut(s) 1252
PvuII CAGCTG 2 cut(s) 488, 809
RsaI GTAC 4 cut(s) 484, 788, 834, 1401
RsaNI GTAC 4 cut(s) 483, 787, 833, 1400
RseI CAYNNNNRTG 2 cut(s) 1062, 1287
SaqAI TTAA 4 cut(s) 467, 1157, 1161, 1532
SatI GCNGC 9 cut(s) 81, 163, 395, 526, 807, 840, 907, 1226, 1437
Sau3AI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
Sau96I GGNCC 2 cut(s) 287, 404
SchI GAGTC 1 cut(s) 1516
ScrFI CCNGG 4 cut(s) 306, 325, 736, 922
SduI GDGCHC 5 cut(s) 663, 1026, 1135, 1387, 1477
SfaNI GCATC 4 cut(s) 160, 283, 310, 347
Sfr274I CTCGAG 1 cut(s) 1252
SinI GGWCC 2 cut(s) 287, 404
SlaI CTCGAG 1 cut(s) 1252
SmiMI CAYNNNNRTG 2 cut(s) 1062, 1287
SmlI CTYRAG 1 cut(s) 1252
SmoI CTYRAG 1 cut(s) 1252
SpeI ACTAGT 1 cut(s) 1376
SsiI CCGC 8 cut(s) 51, 63, 80, 83, 103, 758, 791, 839
SspMI CTAG 7 cut(s) 273, 429, 695, 794, 1086, 1377, 1458
StyD4I CCNGG 4 cut(s) 304, 323, 734, 920
StyI CCWWGG 1 cut(s) 1220
TaaI ACNGT 1 cut(s) 335
TaiI ACGT 2 cut(s) 466, 484
TaqI TCGA 7 cut(s) 95, 133, 147, 168, 210, 341, 1253
TaqII GACCGA 1 cut(s) 368
TatI WGTACW 1 cut(s) 832
TauI GCSGC 2 cut(s) 83, 842
TfiI GAWTC 1 cut(s) 1169
Tru1I TTAA 4 cut(s) 467, 1157, 1161, 1532
Tru9I TTAA 4 cut(s) 467, 1157, 1161, 1532
TscAI CASTG 2 cut(s) 230, 972
TseFI GTSAC 1 cut(s) 1106
TseI GCWGC 7 cut(s) 162, 394, 525, 806, 906, 1225, 1436
Tsp45I GTSAC 1 cut(s) 1106
TspRI CASTG 2 cut(s) 230, 972
VneI GTGCAC 1 cut(s) 1022
VpaK11BI GGWCC 2 cut(s) 287, 404
VspI ATTAAT 1 cut(s) 1157
XagI CCTNNNNNAGG 1 cut(s) 736
XapI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
XcmI CCANNNNNNNNNTGG 1 cut(s) 1209
XhoI CTCGAG 1 cut(s) 1252
XmnI GAANNNNTTC 1 cut(s) 1517
XspI CTAG 7 cut(s) 273, 429, 695, 794, 1086, 1377, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.