pycom13g02680

Sulfhydryl oxidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
1850005 .. 1854046
4042 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g02680.9

Sequence Viewer

Length: 1536 bp
ATGTCTCCTGCACTTGGCCTTCTGATTCTGAGCCTCTTTTCGTTGAACTCCGCACTCTCGCCCGCGTCGGCTTCTTCTGCGGCGGGATCTCGCTCGATCCTCCGCGCTGTCAACGACGACAACGCTGATGTTCGAGACTTTGCCGTCGATTTGAACGCCAGCAGCTTCGATGCAGTCCTCAGCGACACCCCTGCCACCTTTGCCGTAGTCGAATTCTTCGCTCACTGGTGTCCGGCTTGCAGAAATTACAAGCCCCATTACGAAAAGGTTGCTAGGCTTTTCAATGGACCTGATGCTGTGCATCCAGGGATGGTATTGATGACCAGGGTGGACTGTGCATCGAAGGTAAATACCAAACTCTGCGATAACTTTTCTGTCGGTCATTATCCTATGCTGTTTTGGGGACCTCCATCTAAATTTGTATCTGCTGGTTGGGGACCTAATCAAGCAAAAAGTGTTATACGTGTAATTGACGATGGACGTACAGCTGATCGGTTGCTTAGTTGGATCAACAAGCAATTGGGCAGCTCATTCAGCTTGGATGATCAGAAATTTGAAAATGAGCATATTTCGTCAAATGCGTCTGACCCCGAACAGATTGCCCGGGCTGTGTATGATGTTGAGGAAGCAACATCAACTGCTTTTGAAATCATCTTAGAGCACAAGATGATCAAATCAAAAACACGGGCTTCGCTAGTAAAATTTCTTCAACTTTTGGTCGCTCATCATCCCTCCAGGAGGTGCCGAAAGGGAAGTGCAGAGGTGCTTGTGAATTTTGATGACTTGTACCCGCTAGATATCTTGGCAGCTAACAGGCAGGGAGACCAAGATGTACAGGCGGCCTTGCAGAAATTTCAGATTTGTGGTAAAGATGTTCCTCGTGGATATTGGATGTTTTGCCGTGGCAGCAAAAATGATACCAGGGGCTTTAGCTGTGGGTTATGGGTTCTTCTGCATTCACTTTCAGTGAGAATTGAGGATGGAGAAAGCAACTTTGCGTTCACCACTATATGTGATTTTGTGCACAATTTCTTCGTTTGTGAGGAATGTCGCCAGCATTTTTATGATATGTGTTCAAGTGTTTCTAGTCCCTTCAACAAATCCCGTGACTTTGTGCTTTGGCTGTGGAGTGCTCACAATAAAGTCAATGAGAGATTAATTAAAGAGGAATCCTCTTTAGGAACTGCTGATCCGAAATTCCCAAAGATGATTTGGCCTCCAAGGCAGCTTTGTCCTTCTTGTTACCTTTCATCGAGCCAGAAAAACAACGAAATTGATTGGCACAAGGATGAGGTGTTCAAAATTTTGGCCAGTTATTACGGGAAAACCCTTGTTTCTCTTTACAAAGATAAGGGTATTGTTGGGAATGATGAGACTAGCGGCGCTCTTGAAGACTTGGTGGCCTCAACAAATGCGCTTGTGGTGCCTCTGGGGGCTGCGTTGGCTATTGCTGTTGCTAGTTGTGCATTTGGAGCACTCGCTTGCTACTGGCGTTCACAGCAGAAGAGTCGGAAGCCGAGGAGAAGCTGGAGCTAA

Protein Analysis

512

Amino Acids

56.89

Weight (kDa)

7.51

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AccB1I GGYRCC 2 cut(s) 741, 1423
AccII CGCG 2 cut(s) 65, 105
AciI CCGC 8 cut(s) 51, 63, 80, 83, 103, 791, 839, 1380
AclWI GGATC 4 cut(s) 91, 94, 515, 1184
AcoI YGGCCR 1 cut(s) 1308
AcsI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
AfaI GTAC 3 cut(s) 484, 788, 834
AfiI CCNNNNNNNGG 2 cut(s) 14, 738
AflIII ACRYGT 1 cut(s) 463
AjnI CCWGG 4 cut(s) 304, 323, 734, 920
AloI GAACNNNNNNTCC 4 cut(s) 1174, 1206, 1280, 1312
AluBI AGCT 9 cut(s) 165, 488, 528, 537, 809, 933, 1228, 1527, 1533
AluI AGCT 9 cut(s) 165, 488, 528, 537, 809, 933, 1228, 1527, 1533
Alw21I GWGCWC 4 cut(s) 663, 1026, 1135, 1477
Alw26I GTCTC 4 cut(s) 9, 129, 816, 1367
Alw44I GTGCAC 1 cut(s) 1022
AlwI GGATC 4 cut(s) 91, 94, 515, 1184
Ama87I CYCGRG 1 cut(s) 603
AoxI GGCC 5 cut(s) 16, 840, 1214, 1308, 1401
ApaLI GTGCAC 1 cut(s) 1022
ApeKI GCWGC 6 cut(s) 162, 525, 806, 906, 1225, 1436
ApoI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
AseI ATTAAT 1 cut(s) 1157
AspLEI GCGC 3 cut(s) 107, 1385, 1417
AspS9I GGNCC 3 cut(s) 287, 404, 437
AsuC2I CCSGG 2 cut(s) 604, 605
AsuHPI GGTGA 1 cut(s) 994
AvaI CYCGRG 1 cut(s) 603
AvaII GGWCC 3 cut(s) 287, 404, 437
BaeGI GKGCMC 1 cut(s) 1026
BalI TGGCCA 1 cut(s) 1310
BanI GGYRCC 2 cut(s) 741, 1423
BarI GAAGNNNNNNTAC 2 cut(s) 690, 722
BauI CACGAG 1 cut(s) 879
BbsI GAAGAC 1 cut(s) 1398
Bbv12I GWGCWC 4 cut(s) 663, 1026, 1135, 1477
BbvCI CCTCAGC 1 cut(s) 179
BbvI GCAGC 6 cut(s) 174, 537, 818, 918, 1237, 1423
BccI CCATC 4 cut(s) 304, 418, 470, 974
BceAI ACGGC 3 cut(s) 128, 188, 885
BcgI CGANNNNNNTGC 8 cut(s) 173, 207, 251, 285, 581, 615, 1490, 1524
BciT130I CCWGG 4 cut(s) 306, 325, 736, 922
BclI TGATCA 2 cut(s) 544, 669
BcnI CCSGG 2 cut(s) 604, 605
BcoDI GTCTC 4 cut(s) 9, 129, 816, 1367
BfaI CTAG 6 cut(s) 273, 695, 794, 1086, 1377, 1458
BfoI RGCGCY 1 cut(s) 1386
BglI GCCNNNNNGGC 1 cut(s) 1222
BisI GCNGC 9 cut(s) 81, 163, 526, 807, 840, 907, 1226, 1381, 1437
BlsI GCNGC 9 cut(s) 82, 164, 527, 808, 841, 908, 1227, 1382, 1438
Bme1390I CCNGG 6 cut(s) 306, 325, 604, 605, 736, 922
Bme18I GGWCC 3 cut(s) 287, 404, 437
BmeT110I CYCGRG 1 cut(s) 603
BmgT120I GGNCC 3 cut(s) 287, 404, 437
BmiI GGNNCC 4 cut(s) 405, 438, 743, 1425
BmrFI CCNGG 6 cut(s) 306, 325, 604, 605, 736, 922
BmsI GCATC 4 cut(s) 160, 283, 310, 347
BpiI GAAGAC 1 cut(s) 1398
BplI GAGNNNNNCTC 2 cut(s) 1157, 1189
BpmI CTGGAG 1 cut(s) 718
Bpu10I CCTNAGC 1 cut(s) 179
BpuMI CCSGG 2 cut(s) 604, 605
BsaAI YACGTR 1 cut(s) 464
BsaI GGTCTC 1 cut(s) 816
BsaJI CCNNGG 7 cut(s) 305, 324, 603, 901, 921, 1220, 1517
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 738
Bse1I ACTGG 3 cut(s) 230, 1311, 1493
BseBI CCWGG 4 cut(s) 306, 325, 736, 922
BseDI CCNNGG 7 cut(s) 305, 324, 603, 901, 921, 1220, 1517
BseGI GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BseLI CCNNNNNNNGG 2 cut(s) 14, 738
BseMII CTCAG 2 cut(s) 20, 193
BseNI ACTGG 3 cut(s) 230, 1311, 1493
BseRI GAGGAG 1 cut(s) 1534
BseSI GKGCMC 1 cut(s) 1026
BseXI GCAGC 6 cut(s) 174, 537, 818, 918, 1237, 1423
BsgI GTGCAG 1 cut(s) 777
Bsh1236I CGCG 2 cut(s) 65, 105
BshFI GGCC 5 cut(s) 18, 842, 1216, 1310, 1403
BshNI GGYRCC 2 cut(s) 741, 1423
BsiHKAI GWGCWC 4 cut(s) 663, 1026, 1135, 1477
BsiHKCI CYCGRG 1 cut(s) 603
BsiSI CCGG 2 cut(s) 233, 604
BslFI GGGAC 3 cut(s) 417, 450, 1074
BslI CCNNNNNNNGG 2 cut(s) 14, 738
BsmAI GTCTC 4 cut(s) 9, 129, 816, 1367
BsmFI GGGAC 3 cut(s) 417, 450, 1074
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 5 cut(s) 18, 842, 1216, 1310, 1403
Bso31I GGTCTC 1 cut(s) 816
BsoBI CYCGRG 1 cut(s) 603
Bsp1286I GDGCHC 4 cut(s) 663, 1026, 1135, 1477
Bsp1407I TGTACA 1 cut(s) 832
Bsp143I GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BspACI CCGC 8 cut(s) 51, 63, 80, 83, 103, 791, 839, 1380
BspANI GGCC 5 cut(s) 18, 842, 1216, 1310, 1403
BspCNI CTCAG 2 cut(s) 21, 192
BspFNI CGCG 2 cut(s) 65, 105
BspLI GGNNCC 4 cut(s) 405, 438, 743, 1425
BspPI GGATC 4 cut(s) 91, 94, 515, 1184
BspT107I GGYRCC 2 cut(s) 741, 1423
BspTNI GGTCTC 1 cut(s) 816
BsrGI TGTACA 1 cut(s) 832
BsrI ACTGG 3 cut(s) 230, 1311, 1493
BssECI CCNNGG 7 cut(s) 305, 324, 603, 901, 921, 1220, 1517
BssMI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BssSI CACGAG 1 cut(s) 879
BssT1I CCWWGG 1 cut(s) 1220
Bst2BI CACGAG 1 cut(s) 879
Bst2UI CCWGG 4 cut(s) 306, 325, 736, 922
Bst4CI ACNGT 1 cut(s) 335
Bst6I CTCTTC 1 cut(s) 1499
BstAUI TGTACA 1 cut(s) 832
BstBAI YACGTR 1 cut(s) 464
BstC8I GCNNGC 5 cut(s) 63, 160, 238, 1055, 1483
BstDEI CTNAG 4 cut(s) 29, 179, 500, 655
BstDSI CCRYGG 1 cut(s) 901
BstENI CCTNNNNNAGG 1 cut(s) 736
BstF5I GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BstFNI CGCG 2 cut(s) 65, 105
BstH2I RGCGCY 1 cut(s) 1386
BstHHI GCGC 3 cut(s) 107, 1385, 1417
BstKTI GATC 7 cut(s) 89, 99, 493, 510, 547, 672, 1192
BstMAI GTCTC 4 cut(s) 9, 129, 816, 1367
BstMBI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
BstNI CCWGG 4 cut(s) 306, 325, 736, 922
BstSCI CCNGG 6 cut(s) 304, 323, 602, 603, 734, 920
BstSLI GKGCMC 1 cut(s) 1026
BstUI CGCG 2 cut(s) 65, 105
BstV1I GCAGC 6 cut(s) 174, 537, 818, 918, 1237, 1423
BstV2I GAAGAC 1 cut(s) 1398
BstX2I RGATCY 1 cut(s) 86
BstYI RGATCY 1 cut(s) 86
BsuRI GGCC 5 cut(s) 18, 842, 1216, 1310, 1403
BtgI CCRYGG 1 cut(s) 901
BtsCI GGATG 7 cut(s) 301, 315, 547, 727, 897, 985, 1294
BtsIMutI CAGTG 2 cut(s) 223, 972
Cac8I GCNNGC 5 cut(s) 63, 160, 238, 1055, 1483
CfoI GCGC 3 cut(s) 107, 1385, 1417
Cfr13I GGNCC 3 cut(s) 287, 404, 437
Cfr9I CCCGGG 1 cut(s) 603
CseI GACGC 2 cut(s) 54, 570
Csp6I GTAC 3 cut(s) 483, 787, 833
CviQI GTAC 3 cut(s) 483, 787, 833
DdeI CTNAG 4 cut(s) 29, 179, 500, 655
DpnI GATC 7 cut(s) 88, 98, 492, 509, 546, 671, 1191
DpnII GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 1308
Eam1104I CTCTTC 1 cut(s) 1499
EarI CTCTTC 1 cut(s) 1499
Eco130I CCWWGG 1 cut(s) 1220
Eco31I GGTCTC 1 cut(s) 816
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 3 cut(s) 287, 404, 437
Eco88I CYCGRG 1 cut(s) 603
EcoNI CCTNNNNNAGG 1 cut(s) 736
EcoO109I RGGNCCY 2 cut(s) 404, 437
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 4 cut(s) 304, 323, 734, 920
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 1 cut(s) 1220
ErhI CCWWGG 1 cut(s) 1220
FaiI YATR 9 cut(s) 392, 461, 567, 615, 943, 1010, 1012, 1065, 1070
FaqI GGGAC 3 cut(s) 417, 450, 1074
FauI CCCGC 3 cut(s) 70, 76, 798
FbaI TGATCA 2 cut(s) 544, 669
Fnu4HI GCNGC 9 cut(s) 81, 163, 526, 807, 840, 907, 1226, 1381, 1437
FokI GGATG 7 cut(s) 288, 322, 554, 714, 904, 992, 1301
Fsp4HI GCNGC 9 cut(s) 81, 163, 526, 807, 840, 907, 1226, 1381, 1437
FspBI CTAG 6 cut(s) 273, 695, 794, 1086, 1377, 1458
GlaI GCGC 3 cut(s) 106, 1384, 1416
GluI GCNGC 9 cut(s) 81, 163, 526, 807, 840, 907, 1226, 1381, 1437
GsuI CTGGAG 1 cut(s) 718
HaeII RGCGCY 1 cut(s) 1386
HaeIII GGCC 5 cut(s) 18, 842, 1216, 1310, 1403
HapII CCGG 2 cut(s) 233, 604
HgaI GACGC 2 cut(s) 54, 570
HhaI GCGC 3 cut(s) 107, 1385, 1417
Hin6I GCGC 3 cut(s) 105, 1383, 1415
HinP1I GCGC 3 cut(s) 105, 1383, 1415
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 3 cut(s) 25, 1169, 1507
HpaII CCGG 2 cut(s) 233, 604
HphI GGTGA 1 cut(s) 994
Hpy166II GTNNAC 5 cut(s) 112, 331, 1002, 1024, 1496
Hpy188I TCNGA 7 cut(s) 24, 30, 549, 586, 858, 1194, 1512
Hpy188III TCNNGA 2 cut(s) 134, 1388
Hpy8I GTNNAC 5 cut(s) 112, 331, 1002, 1024, 1496
Hpy99I CGWCG 3 cut(s) 70, 119, 149
HpyAV CCTTC 4 cut(s) 29, 337, 1102, 1245
HpyCH4III ACNGT 1 cut(s) 335
HpyCH4IV ACGT 2 cut(s) 463, 481
HpyF3I CTNAG 4 cut(s) 29, 179, 500, 655
HpySE526I ACGT 2 cut(s) 463, 481
HspAI GCGC 3 cut(s) 105, 1383, 1415
Ksp22I TGATCA 2 cut(s) 544, 669
Kzo9I GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
LmnI GCTCC 2 cut(s) 1472, 1530
Lsp1109I GCAGC 6 cut(s) 174, 537, 818, 918, 1237, 1423
LweI GCATC 4 cut(s) 160, 283, 310, 347
MaeI CTAG 6 cut(s) 273, 695, 794, 1086, 1377, 1458
MaeII ACGT 2 cut(s) 463, 481
MaeIII GTNAC 2 cut(s) 1106, 1241
MalI GATC 7 cut(s) 88, 98, 492, 509, 546, 671, 1191
MboI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
MboII GAAGA 7 cut(s) 66, 208, 698, 941, 1024, 1403, 1516
MfeI CAATTG 1 cut(s) 518
MflI RGATCY 1 cut(s) 86
MhlI GDGCHC 4 cut(s) 663, 1026, 1135, 1477
MlsI TGGCCA 1 cut(s) 1310
MluNI TGGCCA 1 cut(s) 1310
MlyI GAGTC 1 cut(s) 1516
MmeI TCCRAC 2 cut(s) 485, 1490
Mox20I TGGCCA 1 cut(s) 1310
MscI TGGCCA 1 cut(s) 1310
MseI TTAA 2 cut(s) 1157, 1161
MslI CAYNNNNRTG 2 cut(s) 1062, 1287
Msp20I TGGCCA 1 cut(s) 1310
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 2 cut(s) 233, 604
MspR9I CCNGG 6 cut(s) 306, 325, 604, 605, 736, 922
MunI CAATTG 1 cut(s) 518
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 4 cut(s) 306, 325, 736, 922
MvnI CGCG 2 cut(s) 65, 105
NciI CCSGG 2 cut(s) 604, 605
NdeII GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
NlaIV GGNNCC 4 cut(s) 405, 438, 743, 1425
NmuCI GTSAC 1 cut(s) 1106
PacI TTAATTAA 1 cut(s) 1161
PcsI WCGNNNNNNNCGW 1 cut(s) 578
PctI GAATGC 1 cut(s) 955
PfeI GAWTC 2 cut(s) 25, 1169
PfoI TCCNGGA 1 cut(s) 734
PkrI GCNGC 9 cut(s) 82, 164, 527, 808, 841, 908, 1227, 1382, 1438
PleI GAGTC 1 cut(s) 1515
PpsI GAGTC 1 cut(s) 1515
Ppu21I YACGTR 1 cut(s) 464
PpuMI RGGWCCY 2 cut(s) 404, 437
PshBI ATTAAT 1 cut(s) 1157
Psp5II RGGWCCY 2 cut(s) 404, 437
Psp6I CCWGG 4 cut(s) 304, 323, 734, 920
PspGI CCWGG 4 cut(s) 304, 323, 734, 920
PspN4I GGNNCC 4 cut(s) 405, 438, 743, 1425
PspPI GGNCC 3 cut(s) 287, 404, 437
PspPPI RGGWCCY 2 cut(s) 404, 437
PsuI RGATCY 1 cut(s) 86
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 3 cut(s) 484, 788, 834
RsaNI GTAC 3 cut(s) 483, 787, 833
RseI CAYNNNNRTG 2 cut(s) 1062, 1287
SaqAI TTAA 2 cut(s) 1157, 1161
SatI GCNGC 9 cut(s) 81, 163, 526, 807, 840, 907, 1226, 1381, 1437
Sau3AI GATC 7 cut(s) 86, 96, 490, 507, 544, 669, 1189
Sau96I GGNCC 3 cut(s) 287, 404, 437
SchI GAGTC 1 cut(s) 1516
ScrFI CCNGG 6 cut(s) 306, 325, 604, 605, 736, 922
SduI GDGCHC 4 cut(s) 663, 1026, 1135, 1477
SfaNI GCATC 4 cut(s) 160, 283, 310, 347
SinI GGWCC 3 cut(s) 287, 404, 437
SmaI CCCGGG 1 cut(s) 605
SmiMI CAYNNNNRTG 2 cut(s) 1062, 1287
SrfI GCCCGGGC 1 cut(s) 605
SsiI CCGC 8 cut(s) 51, 63, 80, 83, 103, 791, 839, 1380
SspMI CTAG 6 cut(s) 273, 695, 794, 1086, 1377, 1458
StyD4I CCNGG 6 cut(s) 304, 323, 602, 603, 734, 920
StyI CCWWGG 1 cut(s) 1220
TaaI ACNGT 1 cut(s) 335
TaiI ACGT 2 cut(s) 466, 484
TaqI TCGA 7 cut(s) 95, 133, 147, 168, 210, 341, 1253
TaqII GACCGA 1 cut(s) 368
TatI WGTACW 1 cut(s) 832
TauI GCSGC 3 cut(s) 83, 842, 1383
TfiI GAWTC 2 cut(s) 25, 1169
Tru1I TTAA 2 cut(s) 1157, 1161
Tru9I TTAA 2 cut(s) 1157, 1161
TscAI CASTG 2 cut(s) 230, 972
TseFI GTSAC 1 cut(s) 1106
TseI GCWGC 6 cut(s) 162, 525, 806, 906, 1225, 1436
Tsp45I GTSAC 1 cut(s) 1106
TspDTI ATGAA 1 cut(s) 1239
TspMI CCCGGG 1 cut(s) 603
TspRI CASTG 2 cut(s) 230, 972
VneI GTGCAC 1 cut(s) 1022
VpaK11BI GGWCC 3 cut(s) 287, 404, 437
VspI ATTAAT 1 cut(s) 1157
XagI CCTNNNNNAGG 1 cut(s) 736
XapI RAATTY 8 cut(s) 212, 416, 551, 701, 772, 851, 1196, 1302
XcmI CCANNNNNNNNNTGG 1 cut(s) 1209
XmaI CCCGGG 1 cut(s) 603
XspI CTAG 6 cut(s) 273, 695, 794, 1086, 1377, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.