MD13G1170500.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0016096
Physical Location & Seq
Forward (+)
13852494 .. 13854302
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1170500.v1.1.491

Sequence Viewer

Length: 1809 bp
ATGAGAAACCCGTTGAACCAAAATCTCATTTTTGCCTTCACCGCCTCAAACCTTTCCCGCCAAAATAAACCGTCAAATTTTCATCTCGTTGAACAGCTCCGGCACTGTAAAGATTCCGGCTCCGCAGAGTCACTGCATTCCGCCGCTATAAAATCCGGTTATTTATATGACACTTTCACCACAAACCATGTCATCAACTGTTATGTTAGGCTCCGAAGAATCGACCTTGCAGGCCAACTGTTTGATGAAATGCCGGAACCAAACGTTGTGTCGTGGACCTCGCTCATGGCCGGTTATGTCGACACGGGTCAGCCCGGAATGGCTCTCTGGCTCTTTGGGAAGATGCCCGAGTGTTCGGTTATTCCCAATGAGTTCACATTCGCGACTGTGATTAATGCGTGTTCGATCCTTGCTCATCTCAGAACTGGGAAGAAAGTTCATGGGCTTGTTGAAGTTTTGGGTTTTCAATCTAACCTTGTTGTTTGCTCTTCGCTGGTTGATATGTACGGGAAGTGCAACGATGTCGATAATGCTCAACGGGTTTTTGATTCGATGAGTTGTAGGAATGTTGTTTCTTGGACTTCAATTATTTGTGCTTATGCACAAAACGCGCAGGGGCAGGAAGCACTTCAACTTTTTCGAGAATTTAATCGATTGATGTCGGAGCGCCCGAATCATTTTATGTTGGCTAGTGTTGTCAATGCTTGTGCAAGCTTGGGTAGATTAGTTTCTGGGAAAGTTGCACATGGATCAGTAATTCGGGGTAGCCATGATTCAAATGATGTGATTGCAAGTGCACTGGTGGACATGTATGCTAAATGTGGGTGTGTTGAATATTCTGATAAGGTTTTCCGGAGGATTCGGAATCCTACTGTAATACCCTACACTTCAATGATTGTGGCTGCAGCAAAGTACGGACTTGGGAGAATGTCTCTTCAACTCTTTCAAGAAATGATCGATAGAGGAATAAAACCAAACAATGTCACCTTTGTTGGGGTTTTGCATGCTTGTAGCCATTCAGGGCTTGTAGATGAAGGCCTCCAACACTTGGAATCTATGTTTGAGAAGCATGGAATATTACCGAATGCAAAGCATCATACGTGCGTCGTTGATATGCTTGGTAGAACTGGCCGGCTCAACGAGGCTTACGAACTAGCCAAATCTATCCAAGCAGAACCAAACCAAGAGGCCTTGTTGTGGGGCACACTTCTTTCGGCGAGTAGGCTTCACGGAAGGGTAGACATCGCTGTTGAAGCTAGCAGACGGCTAATAGACTCTAACCAACAAGTAGCGGGTGCATACGTCACATTATCAAATGCTTACGCATTGAACGGAGAGTGGGAGAACTCTCATGATCTTAGGTCAGAAATGAGGCGTACTGGAGTGCAAAAAGAACCCGGGTGCAGCTGGATTGAGGTCAAGGACTCAACTTACGTATTCTACGCCGGAGATGTGTCATCCTGTGCGCGAGGGAGCGAGGTGGTGGCTTTGTTGAGGGATTTAGAAGGGAAAATGAAACAAAGAGGGTATGTAGGAGGGAGTTTGGGACTGGTCTTTGTCGATGTGGAGGAGGAGGCCAAGGAGGAAATTGTAGGTTTGCACAGTGAGAGATTAGCGTTGGGATTTGCGTTGATAAGCATACCGAAAGGAGTGATCATTAGAATAATGAAGAACTTGAGAATGTGTAGGGATTGTCATGAAGCTTTCAAGTTAATTAGTGAGATTGTTGAGAGGGAATTTGTTGTTAGAGATGTTAATAGATTTCATCACTTCAAAAGTGGTTCCTGCACGTGTACGGATTTTTGGTAA

Protein Analysis

603

Amino Acids

66.95

Weight (kDa)

7.05

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 87 - 134 7.5e-11 PPR repeat family
PPR_2 PF13041 290 - 338 3.6e-08 PPR repeat family
E_motif PF20431 411 - 472 6.2e-14 E motif
DYW_deaminase PF14432 515 - 602 8.9e-34 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016096)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15720
fragaria_vesca FvH4_3g12520
malus_domestica MD13G1170500.v1.1
prunus_persica Prupe.1G138900_v2.0.a1
pyrus_communis pycom13g14610
rosa_chinensis RchiOBHm_Chr4g0421681
rosa_laevigata RLG00000007659
rosa_multiflora Rmu_sc0004533.1_g000011
rosa_roxburghii Rroxscaffold_5G00363920
rosa_rugosa Rorug04G0174600
rosa_samantha Rh4AG233900 Rh4BG237000 Rh4CG248800
rosa_wichuraiana Rw0G007720 Rw4G020010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1048
AccI GTMKAC 2 cut(s) 300, 1239
AccII CGCG 3 cut(s) 383, 611, 1468
AccIII TCCGGA 1 cut(s) 852
AciI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
AclI AACGTT 1 cut(s) 264
AclWI GGATC 2 cut(s) 400, 757
AcoI YGGCCR 2 cut(s) 288, 1129
AcsI RAATTY 3 cut(s) 76, 644, 1736
AcvI CACGTG 1 cut(s) 1791
AfaI GTAC 4 cut(s) 506, 914, 1378, 1795
AfiI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
AflIII ACRYGT 2 cut(s) 807, 1790
AluBI AGCT 5 cut(s) 97, 714, 1256, 1407, 1703
AluI AGCT 5 cut(s) 97, 714, 1256, 1407, 1703
Alw21I GWGCWC 1 cut(s) 799
Alw26I GTCTC 1 cut(s) 936
Alw44I GTGCAC 1 cut(s) 795
AlwI GGATC 2 cut(s) 400, 757
Ama87I CYCGRG 2 cut(s) 347, 1397
Aor13HI TCCGGA 1 cut(s) 852
AoxI GGCC 6 cut(s) 232, 288, 1036, 1129, 1188, 1575
ApaLI GTGCAC 1 cut(s) 795
ApeKI GCWGC 3 cut(s) 902, 905, 1404
ApoI RAATTY 3 cut(s) 76, 644, 1736
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 1 cut(s) 627
AspLEI GCGC 3 cut(s) 613, 669, 1468
AspS9I GGNCC 1 cut(s) 276
AsuC2I CCSGG 3 cut(s) 315, 1398, 1399
AsuHPI GGTGA 3 cut(s) 31, 169, 976
AsuNHI GCTAGC 1 cut(s) 1256
AvaI CYCGRG 2 cut(s) 347, 1397
AvaII GGWCC 1 cut(s) 276
BaeGI GKGCMC 2 cut(s) 799, 1205
BbrPI CACGTG 1 cut(s) 1791
Bbv12I GWGCWC 1 cut(s) 799
BbvI GCAGC 3 cut(s) 889, 917, 1416
BceAI ACGGC 1 cut(s) 1280
BcgI CGANNNNNNTGC 2 cut(s) 505, 539
BclI TGATCA 1 cut(s) 1653
BcnI CCSGG 3 cut(s) 315, 1398, 1399
BcoDI GTCTC 1 cut(s) 936
BfaI CTAG 3 cut(s) 690, 1154, 1257
BfmI CTRYAG 1 cut(s) 903
BfoI RGCGCY 1 cut(s) 670
BisI GCNGC 4 cut(s) 144, 903, 906, 1405
BlsI GCNGC 4 cut(s) 145, 904, 907, 1406
Bme1390I CCNGG 3 cut(s) 315, 1398, 1399
Bme18I GGWCC 1 cut(s) 276
BmeT110I CYCGRG 2 cut(s) 347, 1397
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 4 cut(s) 121, 212, 258, 1783
BmrFI CCNGG 3 cut(s) 315, 1398, 1399
BmrI ACTGGG 1 cut(s) 435
BmsI GCATC 2 cut(s) 333, 1102
BmtI GCTAGC 1 cut(s) 1260
BmuI ACTGGG 1 cut(s) 435
BoxI GACNNNNGTC 1 cut(s) 306
BplI GAGNNNNNCTC 2 cut(s) 916, 948
BpmI CTGGAG 1 cut(s) 1401
BpuEI CTTGAG 1 cut(s) 1696
BpuMI CCSGG 3 cut(s) 315, 1398, 1399
Bsa29I ATCGAT 2 cut(s) 652, 957
BsaAI YACGTR 3 cut(s) 1101, 1435, 1791
BsaJI CCNNGG 2 cut(s) 1397, 1578
BsaWI WCCGGW 2 cut(s) 155, 852
Bsc4I CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
Bse118I RCCGGY 2 cut(s) 290, 1131
Bse1I ACTGG 5 cut(s) 430, 804, 1132, 1384, 1554
BseAI TCCGGA 1 cut(s) 852
BseCI ATCGAT 2 cut(s) 652, 957
BseDI CCNNGG 2 cut(s) 1397, 1578
BseGI GGATG 1 cut(s) 1457
BseLI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
BseMII CTCAG 1 cut(s) 433
BseNI ACTGG 5 cut(s) 430, 804, 1132, 1384, 1554
BseRI GAGGAG 2 cut(s) 1583, 1586
BseSI GKGCMC 2 cut(s) 799, 1205
BseXI GCAGC 3 cut(s) 889, 917, 1416
BsgI GTGCAG 2 cut(s) 1423, 1771
Bsh1236I CGCG 3 cut(s) 383, 611, 1468
BshFI GGCC 6 cut(s) 234, 290, 1038, 1131, 1190, 1577
BshVI ATCGAT 2 cut(s) 652, 957
BsiHKAI GWGCWC 1 cut(s) 799
BsiHKCI CYCGRG 2 cut(s) 347, 1397
BslFI GGGAC 1 cut(s) 1560
BslI CCNNNNNNNGG 3 cut(s) 993, 1048, 1197
BsmAI GTCTC 1 cut(s) 936
BsmFI GGGAC 1 cut(s) 1560
BsmI GAATGC 2 cut(s) 136, 1090
BsnI GGCC 6 cut(s) 234, 290, 1038, 1131, 1190, 1577
BsoBI CYCGRG 2 cut(s) 347, 1397
Bsp1286I GDGCHC 2 cut(s) 799, 1205
Bsp13I TCCGGA 1 cut(s) 852
Bsp143I GATC 5 cut(s) 405, 749, 954, 1354, 1653
Bsp68I TCGCGA 1 cut(s) 383
BspACI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
BspANI GGCC 6 cut(s) 234, 290, 1038, 1131, 1190, 1577
BspCNI CTCAG 1 cut(s) 432
BspDI ATCGAT 2 cut(s) 652, 957
BspEI TCCGGA 1 cut(s) 852
BspFNI CGCG 3 cut(s) 383, 611, 1468
BspHI TCATGA 2 cut(s) 1351, 1696
BspLI GGNNCC 4 cut(s) 121, 212, 258, 1783
BspMAI CTGCAG 1 cut(s) 907
BspOI GCTAGC 1 cut(s) 1260
BspPI GGATC 2 cut(s) 400, 757
BspQI GCTCTTC 1 cut(s) 493
BsrFI RCCGGY 2 cut(s) 290, 1131
BsrI ACTGG 5 cut(s) 430, 804, 1132, 1384, 1554
BssAI RCCGGY 2 cut(s) 290, 1131
BssECI CCNNGG 2 cut(s) 1397, 1578
BssMI GATC 5 cut(s) 405, 749, 954, 1354, 1653
BssT1I CCWWGG 1 cut(s) 1578
Bst4CI ACNGT 7 cut(s) 72, 107, 200, 240, 388, 874, 1604
Bst6I CTCTTC 2 cut(s) 493, 939
BstBAI YACGTR 3 cut(s) 1101, 1435, 1791
BstC8I GCNNGC 5 cut(s) 232, 712, 1005, 1133, 1258
BstDEI CTNAG 2 cut(s) 419, 1358
BstF5I GGATG 1 cut(s) 1457
BstFNI CGCG 3 cut(s) 383, 611, 1468
BstH2I RGCGCY 1 cut(s) 670
BstHHI GCGC 3 cut(s) 613, 669, 1468
BstKTI GATC 5 cut(s) 408, 752, 957, 1357, 1656
BstMAI GTCTC 1 cut(s) 936
BstMBI GATC 5 cut(s) 405, 749, 954, 1354, 1653
BstMWI GCNNNNNNNGC 3 cut(s) 41, 608, 1253
BstNSI RCATGY 2 cut(s) 811, 1007
BstPAI GACNNNNGTC 1 cut(s) 306
BstSCI CCNGG 3 cut(s) 313, 1396, 1397
BstSFI CTRYAG 1 cut(s) 903
BstSLI GKGCMC 2 cut(s) 799, 1205
BstSNI TACGTA 1 cut(s) 1435
BstUI CGCG 3 cut(s) 383, 611, 1468
BstV1I GCAGC 3 cut(s) 889, 917, 1416
Bsu15I ATCGAT 2 cut(s) 652, 957
BsuRI GGCC 6 cut(s) 234, 290, 1038, 1131, 1190, 1577
BsuTUI ATCGAT 2 cut(s) 652, 957
BtgZI GCGATG 1 cut(s) 1228
BtsCI GGATG 1 cut(s) 1457
BtsI GCAGTG 1 cut(s) 131
BtsIMutI CAGTG 4 cut(s) 103, 131, 797, 1609
BtuMI TCGCGA 1 cut(s) 383
Cac8I GCNNGC 5 cut(s) 232, 712, 1005, 1133, 1258
CciI TCATGA 2 cut(s) 1351, 1696
CfoI GCGC 3 cut(s) 613, 669, 1468
Cfr10I RCCGGY 2 cut(s) 290, 1131
Cfr13I GGNCC 1 cut(s) 276
Cfr9I CCCGGG 1 cut(s) 1397
ClaI ATCGAT 2 cut(s) 652, 957
CseI GACGC 1 cut(s) 1093
Csp6I GTAC 4 cut(s) 505, 913, 1377, 1794
CspCI CAANNNNNGTGG 2 cut(s) 879, 914
CviQI GTAC 4 cut(s) 505, 913, 1377, 1794
DdeI CTNAG 2 cut(s) 419, 1358
DpnI GATC 5 cut(s) 407, 751, 956, 1356, 1655
DpnII GATC 5 cut(s) 405, 749, 954, 1354, 1653
EaeI YGGCCR 2 cut(s) 288, 1129
Eam1104I CTCTTC 2 cut(s) 493, 939
EarI CTCTTC 2 cut(s) 493, 939
EciI GGCGGA 1 cut(s) 130
Eco105I TACGTA 1 cut(s) 1435
Eco130I CCWWGG 1 cut(s) 1578
Eco147I AGGCCT 2 cut(s) 1038, 1190
Eco47I GGWCC 1 cut(s) 276
Eco72I CACGTG 1 cut(s) 1791
Eco88I CYCGRG 2 cut(s) 347, 1397
EcoT14I CCWWGG 1 cut(s) 1578
ErhI CCWWGG 1 cut(s) 1578
FaqI GGGAC 1 cut(s) 1560
FauI CCCGC 2 cut(s) 65, 1285
FbaI TGATCA 1 cut(s) 1653
FblI GTMKAC 2 cut(s) 300, 1239
Fnu4HI GCNGC 4 cut(s) 144, 903, 906, 1405
FokI GGATG 1 cut(s) 1444
Fsp4HI GCNGC 4 cut(s) 144, 903, 906, 1405
FspBI CTAG 3 cut(s) 690, 1154, 1257
GlaI GCGC 3 cut(s) 612, 668, 1467
GluI GCNGC 4 cut(s) 144, 903, 906, 1405
GsuI CTGGAG 1 cut(s) 1401
HaeII RGCGCY 1 cut(s) 670
HaeIII GGCC 6 cut(s) 234, 290, 1038, 1131, 1190, 1577
HgaI GACGC 1 cut(s) 1093
HhaI GCGC 3 cut(s) 613, 669, 1468
Hin6I GCGC 3 cut(s) 611, 667, 1466
HinP1I GCGC 3 cut(s) 611, 667, 1466
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 712, 1701
HphI GGTGA 3 cut(s) 31, 169, 976
Hpy166II GTNNAC 7 cut(s) 276, 301, 375, 797, 805, 1240, 1794
Hpy188I TCNGA 6 cut(s) 215, 422, 664, 841, 864, 1366
Hpy188III TCNNGA 6 cut(s) 382, 641, 853, 947, 1352, 1697
Hpy8I GTNNAC 7 cut(s) 276, 301, 375, 797, 805, 1240, 1794
Hpy99I CGWCG 1 cut(s) 1109
HpyAV CCTTC 4 cut(s) 46, 1028, 1227, 1499
HpyCH4III ACNGT 7 cut(s) 72, 107, 200, 240, 388, 874, 1604
HpyCH4IV ACGT 5 cut(s) 264, 1100, 1302, 1434, 1790
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 608, 1253
HpyF3I CTNAG 2 cut(s) 419, 1358
HpySE526I ACGT 5 cut(s) 264, 1100, 1302, 1434, 1790
HspAI GCGC 3 cut(s) 611, 667, 1466
Kpn2I TCCGGA 1 cut(s) 852
KroI GCCGGC 1 cut(s) 1131
KroNI GCCGGC 1 cut(s) 1133
Ksp22I TGATCA 1 cut(s) 1653
Kzo9I GATC 5 cut(s) 405, 749, 954, 1354, 1653
LguI GCTCTTC 1 cut(s) 493
LmnI GCTCC 5 cut(s) 102, 125, 216, 664, 1473
Lsp1109I GCAGC 3 cut(s) 889, 917, 1416
LweI GCATC 2 cut(s) 333, 1102
MaeI CTAG 3 cut(s) 690, 1154, 1257
MaeII ACGT 5 cut(s) 264, 1100, 1302, 1434, 1790
MaeIII GTNAC 3 cut(s) 129, 982, 1303
MalI GATC 5 cut(s) 407, 751, 956, 1356, 1655
MboI GATC 5 cut(s) 405, 749, 954, 1354, 1653
MboII GAAGA 6 cut(s) 228, 352, 442, 480, 926, 1681
MhlI GDGCHC 2 cut(s) 799, 1205
MluCI AATT 7 cut(s) 76, 585, 644, 756, 1587, 1713, 1736
MlyI GAGTC 3 cut(s) 137, 1268, 1418
MmeI TCCRAC 2 cut(s) 642, 1066
MroI TCCGGA 1 cut(s) 852
MroNI GCCGGC 1 cut(s) 1131
MroXI GAANNNNTTC 1 cut(s) 627
MseI TTAA 4 cut(s) 393, 648, 1712, 1755
MslI CAYNNNNRTG 1 cut(s) 890
MspA1I CMGCKG 1 cut(s) 1407
MspR9I CCNGG 3 cut(s) 315, 1398, 1399
Mva1269I GAATGC 2 cut(s) 136, 1090
MvnI CGCG 3 cut(s) 383, 611, 1468
MwoI GCNNNNNNNGC 3 cut(s) 41, 608, 1253
NaeI GCCGGC 1 cut(s) 1133
NciI CCSGG 3 cut(s) 315, 1398, 1399
NdeII GATC 5 cut(s) 405, 749, 954, 1354, 1653
NgoMIV GCCGGC 1 cut(s) 1131
NheI GCTAGC 1 cut(s) 1256
NlaIV GGNNCC 4 cut(s) 121, 212, 258, 1783
NmuCI GTSAC 3 cut(s) 129, 982, 1303
NruI TCGCGA 1 cut(s) 383
NspI RCATGY 2 cut(s) 811, 1007
PaeI GCATGC 1 cut(s) 1007
PagI TCATGA 2 cut(s) 1351, 1696
PceI AGGCCT 2 cut(s) 1038, 1190
PciI ACATGT 1 cut(s) 807
PciSI GCTCTTC 1 cut(s) 493
PcsI WCGNNNNNNNCGW 2 cut(s) 668, 1146
PctI GAATGC 2 cut(s) 136, 1090
PdiI GCCGGC 1 cut(s) 1133
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 8 cut(s) 113, 219, 548, 673, 773, 859, 865, 1052
PflMI CCANNNNNTGG 1 cut(s) 1048
PkrI GCNGC 4 cut(s) 145, 904, 907, 1406
PleI GAGTC 3 cut(s) 136, 1268, 1418
PmaCI CACGTG 1 cut(s) 1791
PmlI CACGTG 1 cut(s) 1791
PpsI GAGTC 3 cut(s) 136, 1268, 1418
Ppu21I YACGTR 3 cut(s) 1101, 1435, 1791
PscI ACATGT 1 cut(s) 807
PshAI GACNNNNGTC 1 cut(s) 306
PshBI ATTAAT 1 cut(s) 393
Psp1406I AACGTT 1 cut(s) 264
PspCI CACGTG 1 cut(s) 1791
PspN4I GGNNCC 4 cut(s) 121, 212, 258, 1783
PspPI GGNCC 1 cut(s) 276
PstI CTGCAG 1 cut(s) 907
PvuII CAGCTG 1 cut(s) 1407
RruI TCGCGA 1 cut(s) 383
RsaI GTAC 4 cut(s) 506, 914, 1378, 1795
RsaNI GTAC 4 cut(s) 505, 913, 1377, 1794
RseI CAYNNNNRTG 1 cut(s) 890
SalI GTCGAC 1 cut(s) 299
SapI GCTCTTC 1 cut(s) 493
SaqAI TTAA 4 cut(s) 393, 648, 1712, 1755
SatI GCNGC 4 cut(s) 144, 903, 906, 1405
Sau3AI GATC 5 cut(s) 405, 749, 954, 1354, 1653
Sau96I GGNCC 1 cut(s) 276
SchI GAGTC 3 cut(s) 137, 1268, 1418
ScrFI CCNGG 3 cut(s) 315, 1398, 1399
SduI GDGCHC 2 cut(s) 799, 1205
SfaNI GCATC 2 cut(s) 333, 1102
SfcI CTRYAG 1 cut(s) 903
SinI GGWCC 1 cut(s) 276
SmaI CCCGGG 1 cut(s) 1399
SmiMI CAYNNNNRTG 1 cut(s) 890
SmlI CTYRAG 1 cut(s) 1675
SmoI CTYRAG 1 cut(s) 1675
SnaBI TACGTA 1 cut(s) 1435
SphI GCATGC 1 cut(s) 1007
Sse9I AATT 7 cut(s) 76, 585, 644, 756, 1587, 1713, 1736
SseBI AGGCCT 2 cut(s) 1038, 1190
SsiI CCGC 6 cut(s) 42, 58, 123, 141, 144, 1292
SspI AATATT 2 cut(s) 836, 1077
SspMI CTAG 3 cut(s) 690, 1154, 1257
StuI AGGCCT 2 cut(s) 1038, 1190
StyD4I CCNGG 3 cut(s) 313, 1396, 1397
StyI CCWWGG 1 cut(s) 1578
TaaI ACNGT 7 cut(s) 72, 107, 200, 240, 388, 874, 1604
TaiI ACGT 5 cut(s) 267, 1103, 1305, 1437, 1793
TaqI TCGA 9 cut(s) 222, 300, 404, 525, 551, 640, 652, 957, 1560
TasI AATT 7 cut(s) 76, 585, 644, 756, 1587, 1713, 1736
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 8 cut(s) 113, 219, 548, 673, 773, 859, 865, 1052
Tru1I TTAA 4 cut(s) 393, 648, 1712, 1755
Tru9I TTAA 4 cut(s) 393, 648, 1712, 1755
TscAI CASTG 4 cut(s) 110, 138, 804, 1609
TseFI GTSAC 3 cut(s) 129, 982, 1303
TseI GCWGC 3 cut(s) 902, 905, 1404
Tsp45I GTSAC 3 cut(s) 129, 982, 1303
TspDTI ATGAA 8 cut(s) 71, 261, 428, 1047, 1529, 1682, 1713, 1754
TspGWI ACGGA 3 cut(s) 930, 1245, 1347
TspMI CCCGGG 1 cut(s) 1397
TspRI CASTG 4 cut(s) 110, 138, 804, 1609
Van91I CCANNNNNTGG 1 cut(s) 1048
VneI GTGCAC 1 cut(s) 795
VpaK11BI GGWCC 1 cut(s) 276
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 3 cut(s) 76, 644, 1736
XceI RCATGY 2 cut(s) 811, 1007
XmaI CCCGGG 1 cut(s) 1397
XmiI GTMKAC 2 cut(s) 300, 1239
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 3 cut(s) 690, 1154, 1257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.