MD14G1015200.v1.1

Ergosterol biosynthesis ERG4/ERG24 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
1334762 .. 1340076
5315 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1015200.v1.1.491

Sequence Viewer

Length: 1110 bp
ATGGATCTGGATCATCTTCTACACCTCCTAATTCCCTCATGGACCTCTGTTGCTATCCTGGCATTGTTCTTCACTTACTTGGCCATTGCTGGATCTTTACTGCCCGGAAAACTTGTCCCCGGAGCCACCCTACCGGATGGCTCTCGGCTTCATTATCGATGCAATGGTCTGCTATCACTTCTGTGGCTGGTTGGGCTTCTTGGGGTCGGCGCTAAGATGGATATCGTATCGCTTACTGCAATATCAGATAGAGGACTCGAGCTGTTGTCAACAACTTTTCTGTTTAGTGTTCTGGTCACAATGGTACTTTACGCTGCGGGCTGCAAGTCGACCAACCGGGGTTCTTCCCTGAAGCCTCATGTCACAGGGAACCTTCTTGAGGACTGGTGGTTTGGAATACAGCTTAATCCGCAGTTTATGGGCATTGACCTCAAATTTTTCTTTGTTAGAGCTGGAATGATGGGCTGGCTATTTATCAACCTTTCGGTTCTCGCCAGAAGTGTTCAAGATGGTACCTTGAGTCAATCAATGTTCCTCTTCCAGTTGTTTTGTGCGTTATACATCTTGGACTACTTTGTTCATGAGGAGTACATGACCTCCACATGGGACATAATCGCAGAGAGACTGGGCTTCATGCTGGTATTTGGAGATCTAGTCTGGATTCCGTTCACTTTCAGCATCCAGGGATGGTGGCTTCTGAGCAATAAGGTGGAGTTAGGAACAGCGGCTGTCGTAGCAAATTGCTTGACATTTCTGATTGGGTACCTTGTATTCAGAGGAGCCAACAAGCAAAAGCACGTCTTTAAGAAGAATCCCAAAGCACCCATATGGGGTAAGCCCTGTAGGGTCATTGGGGGAAAGTTGCTTGCTTCTGGTTATTGGGGAATTGCAAGACACTGTAATTACCTCGGGGACTTGTTACTTGCACTGTCTCTCAGCTTACCTTGCGGGATAAGTTCCCCAGTTCCATACTTCTATCCAATTTATCTTCTTATTCTGCTCATATGGAGAGAAAGACGAGACGAAGCTCGTTGTGCTGAGAAGTACAGAGAGATCTGGGCCGAATACTGCCGGCTTGTTCCATGGAGAATATTACCTTATGTTTATTAA

Protein Analysis

370

Amino Acids

41.75

Weight (kDa)

8.88

Isoelectric Point (pI)

26.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERG4_ERG24 PF01222 10 - 369 1e-95 Ergosterol biosynthesis ERG4/ERG24 family
DUF1295 PF06966 207 - 314 1.5e-06 Protein of unknown function (DUF1295)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011259)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 512, 762
AccB1I GGYRCC 2 cut(s) 512, 762
AccI GTMKAC 1 cut(s) 329
AciI CCGC 4 cut(s) 317, 410, 725, 948
AclWI GGATC 3 cut(s) 12, 18, 100
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 1 cut(s) 434
AcuI CTGAAG 1 cut(s) 371
AfaI GTAC 5 cut(s) 306, 514, 590, 764, 1046
AfiI CCNNNNNNNGG 3 cut(s) 379, 603, 830
AgsI TTSAA 1 cut(s) 506
AjiI CACGTC 1 cut(s) 799
AjnI CCWGG 2 cut(s) 57, 681
AleI CACNNNNGTG 1 cut(s) 181
AluBI AGCT 5 cut(s) 262, 403, 452, 939, 1028
AluI AGCT 5 cut(s) 262, 403, 452, 939, 1028
Alw26I GTCTC 3 cut(s) 616, 936, 1014
AlwI GGATC 3 cut(s) 12, 18, 100
AlwNI CAGNNNCTG 1 cut(s) 728
Ama87I CYCGRG 2 cut(s) 257, 908
AoxI GGCC 2 cut(s) 81, 1059
ApeKI GCWGC 2 cut(s) 314, 321
ApoI RAATTY 1 cut(s) 434
ArsI GACNNNNNNTTYG 2 cut(s) 374, 406
Asp718I GGTACC 2 cut(s) 512, 762
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 2 cut(s) 42, 1059
AsuC2I CCSGG 3 cut(s) 105, 120, 338
AvaI CYCGRG 2 cut(s) 257, 908
AvaII GGWCC 1 cut(s) 42
BalI TGGCCA 1 cut(s) 83
BanI GGYRCC 2 cut(s) 512, 762
BbvI GCAGC 2 cut(s) 301, 308
BccI CCATC 5 cut(s) 131, 211, 454, 503, 681
BciT130I CCWGG 2 cut(s) 59, 683
BcnI CCSGG 3 cut(s) 105, 120, 338
BcoDI GTCTC 3 cut(s) 616, 936, 1014
BfaI CTAG 1 cut(s) 653
BfmI CTRYAG 1 cut(s) 841
BfoI RGCGCY 1 cut(s) 213
BglII AGATCT 2 cut(s) 649, 1053
BisI GCNGC 3 cut(s) 315, 322, 726
BlsI GCNGC 3 cut(s) 316, 323, 727
Bme1390I CCNGG 5 cut(s) 59, 105, 120, 338, 683
Bme18I GGWCC 1 cut(s) 42
BmeT110I CYCGRG 2 cut(s) 257, 908
BmgBI CACGTC 1 cut(s) 799
BmgT120I GGNCC 2 cut(s) 42, 1059
BmiI GGNNCC 5 cut(s) 124, 371, 514, 764, 781
BmrFI CCNGG 5 cut(s) 59, 105, 120, 338, 683
BmrI ACTGGG 2 cut(s) 635, 956
BmsI GCATC 2 cut(s) 149, 687
BmuI ACTGGG 2 cut(s) 635, 956
BpuEI CTTGAG 2 cut(s) 398, 538
BpuMI CCSGG 3 cut(s) 105, 120, 338
Bsa29I ATCGAT 1 cut(s) 157
BsaBI GATNNNNATC 2 cut(s) 9, 221
BsaJI CCNNGG 5 cut(s) 118, 337, 682, 907, 1082
BsaWI WCCGGW 1 cut(s) 133
BsaXI ACNNNNNCTCC 4 cut(s) 581, 611, 639, 669
Bsc4I CCNNNNNNNGG 3 cut(s) 379, 603, 830
Bse118I RCCGGY 1 cut(s) 1071
Bse1I ACTGG 4 cut(s) 389, 541, 630, 962
Bse3DI GCAATG 2 cut(s) 84, 169
Bse8I GATNNNNATC 2 cut(s) 9, 221
BseBI CCWGG 2 cut(s) 59, 683
BseCI ATCGAT 1 cut(s) 157
BseDI CCNNGG 5 cut(s) 118, 337, 682, 907, 1082
BseGI GGATG 3 cut(s) 142, 678, 692
BseJI GATNNNNATC 2 cut(s) 9, 221
BseLI CCNNNNNNNGG 3 cut(s) 379, 603, 830
BseMI GCAATG 2 cut(s) 84, 169
BseMII CTCAG 3 cut(s) 689, 949, 1029
BseNI ACTGG 4 cut(s) 389, 541, 630, 962
BseRI GAGGAG 2 cut(s) 599, 792
BseXI GCAGC 2 cut(s) 301, 308
BshFI GGCC 2 cut(s) 83, 1061
BshNI GGYRCC 2 cut(s) 512, 762
BshVI ATCGAT 1 cut(s) 157
BsiHKCI CYCGRG 2 cut(s) 257, 908
BsiSI CCGG 5 cut(s) 105, 120, 134, 337, 1072
BslFI GGGAC 3 cut(s) 101, 620, 926
BslI CCNNNNNNNGG 3 cut(s) 379, 603, 830
BsmAI GTCTC 3 cut(s) 616, 936, 1014
BsmBI CGTCTC 1 cut(s) 1014
BsmFI GGGAC 3 cut(s) 101, 620, 926
BsnI GGCC 2 cut(s) 83, 1061
BsoBI CYCGRG 2 cut(s) 257, 908
Bsp143I GATC 5 cut(s) 4, 10, 92, 649, 1053
Bsp19I CCATGG 1 cut(s) 1082
BspACI CCGC 4 cut(s) 317, 410, 725, 948
BspANI GGCC 2 cut(s) 83, 1061
BspCNI CTCAG 3 cut(s) 690, 948, 1030
BspDI ATCGAT 1 cut(s) 157
BspHI TCATGA 1 cut(s) 580
BspLI GGNNCC 5 cut(s) 124, 371, 514, 764, 781
BspPI GGATC 3 cut(s) 12, 18, 100
BspT107I GGYRCC 2 cut(s) 512, 762
BsrDI GCAATG 2 cut(s) 84, 169
BsrFI RCCGGY 1 cut(s) 1071
BsrI ACTGG 4 cut(s) 389, 541, 630, 962
BssAI RCCGGY 1 cut(s) 1071
BssECI CCNNGG 5 cut(s) 118, 337, 682, 907, 1082
BssMI GATC 5 cut(s) 4, 10, 92, 649, 1053
BssT1I CCWWGG 1 cut(s) 1082
Bst2UI CCWGG 2 cut(s) 59, 683
Bst4CI ACNGT 2 cut(s) 899, 930
Bst6I CTCTTC 1 cut(s) 542
BstC8I GCNNGC 4 cut(s) 319, 467, 867, 1073
BstDEI CTNAG 4 cut(s) 213, 698, 935, 1038
BstDSI CCRYGG 1 cut(s) 1082
BstENI CCTNNNNNAGG 1 cut(s) 377
BstF5I GGATG 3 cut(s) 142, 678, 692
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 5 cut(s) 7, 13, 95, 652, 1056
BstMAI GTCTC 3 cut(s) 616, 936, 1014
BstMBI GATC 5 cut(s) 4, 10, 92, 649, 1053
BstMWI GCNNNNNNNGC 6 cut(s) 59, 193, 409, 734, 945, 1034
BstNI CCWGG 2 cut(s) 59, 683
BstSCI CCNGG 5 cut(s) 57, 103, 118, 336, 681
BstSFI CTRYAG 1 cut(s) 841
BstV1I GCAGC 2 cut(s) 301, 308
BstX2I RGATCY 4 cut(s) 4, 92, 649, 1053
BstYI RGATCY 4 cut(s) 4, 92, 649, 1053
Bsu15I ATCGAT 1 cut(s) 157
BsuRI GGCC 2 cut(s) 83, 1061
BsuTUI ATCGAT 1 cut(s) 157
BtgI CCRYGG 1 cut(s) 1082
BtrI CACGTC 1 cut(s) 799
BtsCI GGATG 3 cut(s) 142, 678, 692
BtsIMutI CAGTG 2 cut(s) 895, 926
Cac8I GCNNGC 4 cut(s) 319, 467, 867, 1073
CaiI CAGNNNCTG 1 cut(s) 728
CciI TCATGA 1 cut(s) 580
CfoI GCGC 1 cut(s) 212
Cfr10I RCCGGY 1 cut(s) 1071
Cfr13I GGNCC 2 cut(s) 42, 1059
ClaI ATCGAT 1 cut(s) 157
Csp6I GTAC 5 cut(s) 305, 513, 589, 763, 1045
CviAII CATG 7 cut(s) 39, 359, 581, 592, 603, 634, 1083
CviQI GTAC 5 cut(s) 305, 513, 589, 763, 1045
DdeI CTNAG 4 cut(s) 213, 698, 935, 1038
DpnI GATC 5 cut(s) 6, 12, 94, 651, 1055
DpnII GATC 5 cut(s) 4, 10, 92, 649, 1053
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 542
EarI CTCTTC 1 cut(s) 542
Eco130I CCWWGG 1 cut(s) 1082
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 371
Eco88I CYCGRG 2 cut(s) 257, 908
EcoNI CCTNNNNNAGG 1 cut(s) 377
EcoRII CCWGG 2 cut(s) 57, 681
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 1082
ErhI CCWWGG 1 cut(s) 1082
Esp3I CGTCTC 1 cut(s) 1014
FaeI CATG 7 cut(s) 42, 362, 584, 595, 606, 637, 1086
FalI AAGNNNNNCTT 2 cut(s) 785, 817
FaqI GGGAC 3 cut(s) 101, 620, 926
FatI CATG 7 cut(s) 38, 358, 580, 591, 602, 633, 1082
FauI CCCGC 2 cut(s) 310, 941
FauNDI CATATG 2 cut(s) 827, 1004
FblI GTMKAC 1 cut(s) 329
Fnu4HI GCNGC 3 cut(s) 315, 322, 726
FokI GGATG 3 cut(s) 149, 665, 699
Fsp4HI GCNGC 3 cut(s) 315, 322, 726
FspBI CTAG 1 cut(s) 653
GlaI GCGC 1 cut(s) 211
GluI GCNGC 3 cut(s) 315, 322, 726
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 2 cut(s) 83, 1061
HapII CCGG 5 cut(s) 105, 120, 134, 337, 1072
HhaI GCGC 1 cut(s) 212
Hin1II CATG 7 cut(s) 42, 362, 584, 595, 606, 637, 1086
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 2 cut(s) 270, 330
HindII GTYRAC 2 cut(s) 270, 330
HinfI GANTC 4 cut(s) 255, 520, 661, 811
HpaII CCGG 5 cut(s) 105, 120, 134, 337, 1072
Hpy166II GTNNAC 3 cut(s) 270, 330, 669
Hpy188I TCNGA 4 cut(s) 247, 699, 756, 776
Hpy188III TCNNGA 5 cut(s) 8, 377, 506, 581, 658
Hpy8I GTNNAC 3 cut(s) 270, 330, 669
HpyAV CCTTC 1 cut(s) 383
HpyCH4III ACNGT 2 cut(s) 899, 930
HpyCH4IV ACGT 1 cut(s) 798
HpyCH4V TGCA 5 cut(s) 162, 239, 324, 890, 926
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 193, 409, 734, 945, 1034
HpyF3I CTNAG 4 cut(s) 213, 698, 935, 1038
HpySE526I ACGT 1 cut(s) 798
Hsp92II CATG 7 cut(s) 42, 362, 584, 595, 606, 637, 1086
HspAI GCGC 1 cut(s) 210
KpnI GGTACC 2 cut(s) 516, 766
KroI GCCGGC 1 cut(s) 1071
KroNI GCCGGC 1 cut(s) 1073
Kzo9I GATC 5 cut(s) 4, 10, 92, 649, 1053
LmnI GCTCC 2 cut(s) 122, 779
Lsp1109I GCAGC 2 cut(s) 301, 308
LweI GCATC 2 cut(s) 149, 687
MaeI CTAG 1 cut(s) 653
MaeII ACGT 1 cut(s) 798
MaeIII GTNAC 3 cut(s) 295, 361, 918
MalI GATC 5 cut(s) 6, 12, 94, 651, 1055
MboI GATC 5 cut(s) 4, 10, 92, 649, 1053
MboII GAAGA 6 cut(s) 8, 61, 336, 529, 820, 980
MflI RGATCY 4 cut(s) 4, 92, 649, 1053
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 6 cut(s) 30, 434, 739, 885, 901, 981
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 2 cut(s) 249, 529
Mox20I TGGCCA 1 cut(s) 83
MroNI GCCGGC 1 cut(s) 1071
MscI TGGCCA 1 cut(s) 83
MseI TTAA 3 cut(s) 405, 804, 1108
MslI CAYNNNNRTG 2 cut(s) 181, 826
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 725
MspI CCGG 5 cut(s) 105, 120, 134, 337, 1072
MspR9I CCNGG 5 cut(s) 59, 105, 120, 338, 683
MvaI CCWGG 2 cut(s) 59, 683
MwoI GCNNNNNNNGC 6 cut(s) 59, 193, 409, 734, 945, 1034
NaeI GCCGGC 1 cut(s) 1073
NciI CCSGG 3 cut(s) 105, 120, 338
NcoI CCATGG 1 cut(s) 1082
NdeI CATATG 2 cut(s) 827, 1004
NdeII GATC 5 cut(s) 4, 10, 92, 649, 1053
NgoMIV GCCGGC 1 cut(s) 1071
NlaIII CATG 7 cut(s) 42, 362, 584, 595, 606, 637, 1086
NlaIV GGNNCC 5 cut(s) 124, 371, 514, 764, 781
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 2 cut(s) 295, 361
OliI CACNNNNGTG 1 cut(s) 181
PaeR7I CTCGAG 1 cut(s) 257
PagI TCATGA 1 cut(s) 580
PdiI GCCGGC 1 cut(s) 1073
PfeI GAWTC 2 cut(s) 661, 811
PkrI GCNGC 3 cut(s) 316, 323, 727
PleI GAGTC 2 cut(s) 249, 528
PpsI GAGTC 2 cut(s) 249, 528
Psp6I CCWGG 2 cut(s) 57, 681
PspGI CCWGG 2 cut(s) 57, 681
PspN4I GGNNCC 5 cut(s) 124, 371, 514, 764, 781
PspPI GGNCC 2 cut(s) 42, 1059
PspXI VCTCGAGB 1 cut(s) 257
PstNI CAGNNNCTG 1 cut(s) 728
PsuI RGATCY 4 cut(s) 4, 92, 649, 1053
RsaI GTAC 5 cut(s) 306, 514, 590, 764, 1046
RsaNI GTAC 5 cut(s) 305, 513, 589, 763, 1045
RseI CAYNNNNRTG 2 cut(s) 181, 826
SalI GTCGAC 1 cut(s) 328
SaqAI TTAA 3 cut(s) 405, 804, 1108
SatI GCNGC 3 cut(s) 315, 322, 726
Sau3AI GATC 5 cut(s) 4, 10, 92, 649, 1053
Sau96I GGNCC 2 cut(s) 42, 1059
SchI GAGTC 2 cut(s) 249, 529
ScrFI CCNGG 5 cut(s) 59, 105, 120, 338, 683
SfaNI GCATC 2 cut(s) 149, 687
SfcI CTRYAG 1 cut(s) 841
Sfr274I CTCGAG 1 cut(s) 257
SinI GGWCC 1 cut(s) 42
SlaI CTCGAG 1 cut(s) 257
SmiMI CAYNNNNRTG 2 cut(s) 181, 826
SmlI CTYRAG 3 cut(s) 257, 377, 517
SmoI CTYRAG 3 cut(s) 257, 377, 517
Sse9I AATT 6 cut(s) 30, 434, 739, 885, 901, 981
SsiI CCGC 4 cut(s) 317, 410, 725, 948
SspI AATATT 1 cut(s) 1092
SspMI CTAG 1 cut(s) 653
StyD4I CCNGG 5 cut(s) 57, 103, 118, 336, 681
StyI CCWWGG 1 cut(s) 1082
TaaI ACNGT 2 cut(s) 899, 930
TaiI ACGT 1 cut(s) 801
TaqI TCGA 3 cut(s) 157, 258, 329
TasI AATT 6 cut(s) 30, 434, 739, 885, 901, 981
TatI WGTACW 2 cut(s) 588, 1044
TauI GCSGC 1 cut(s) 728
TfiI GAWTC 2 cut(s) 661, 811
Tru1I TTAA 3 cut(s) 405, 804, 1108
Tru9I TTAA 3 cut(s) 405, 804, 1108
TscAI CASTG 2 cut(s) 902, 933
TseFI GTSAC 2 cut(s) 295, 361
TseI GCWGC 2 cut(s) 314, 321
Tsp45I GTSAC 2 cut(s) 295, 361
TspDTI ATGAA 3 cut(s) 140, 569, 622
TspGWI ACGGA 1 cut(s) 654
TspRI CASTG 2 cut(s) 902, 933
VpaK11BI GGWCC 1 cut(s) 42
XagI CCTNNNNNAGG 1 cut(s) 377
XapI RAATTY 1 cut(s) 434
XhoI CTCGAG 1 cut(s) 257
XmiI GTMKAC 1 cut(s) 329
XspI CTAG 1 cut(s) 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.