MD14G1107900.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0007429
Physical Location & Seq
Forward (+)
16849548 .. 16855157
5610 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1107900.v1.1.491

Sequence Viewer

Length: 3048 bp
ATGGATATCGGAGATGATAGCTCGAGGTTCTGTTCTTTACCGGCTACAACTTCAAGGAATATGTCCACCTCATCTTCGGCATTCTTTTCAGCAAACCAGTCGCCATTTTTCTCCCCAAGATCGCCATCTTGTCAACTATCTGAATCAACAAGGTCTGATGCTCCATGTGATAGCATGGTTTTAAGTACAGATCCCCTCAGTTCCAGCTCTGGAATTCCAGACCTTGAATCTCTAGCAAATGTAAGATATAAATTGTCAAACATGTCACCGGCCCCAGCTGCTTCAGTCTCAGGTGATTTTGAGAAGTTTGACCGCGTGTCTTCCTCAACAGCCATTTCTAATAGCATTCTATCTAGTCACAGCCATGCCTGGGTCTATGAGTATTCTGGGCAAAGAGAGAGGCAGAGAAGGCCTGGGAGAAACTCTGGAGACTCATATATATCTGGTCCGGTTTCAATGACATCTAATAGACTGAGGAGCTGTGATGTTTTCATAGGTTTGCATGGCCGTAAACCTTCTTTGCTGAGGTTTGCTAATTGGCTCCGAGTTGAGTTGGAAGTTCAGGGGATGAGTTGCTTTGTATCTGATAGAGCTCGATGTAGGAACTCTCGCAAACATGGAATTGTTGAGAGGGCCATGGACGTTTCTTCTTTTGGGATTGTCATCCTAACAAGGAAGTCATTCCGAAATCCATATACCATCGAGGAACTTCAATTTTTCGCTAGCAAGAAGAACTTGGTCCCAATATTCTTTGATTTGCGTCCAGGTGATTGCCTTGTCAGGGATATCGTTGAGAAGAGAGGAGAGCTGTGGGAAAGACATGGGGGAGAGTTATGGATTTTGTATGGAGGACTCGAGAAGGAGTGGAAAGAAGCTCTTCATAGCCTCTCCCGGGTGGATGAATGGAAATTGGAGGCTCAGGATGGTAACTGGAGAGATTGTATATTAAGGGCCGTCACATTATTAGCAATTAGATTAGGGAGGAGAAGTGTTGTAGACCGGTTAAGCAAGTGGAGAGAGAAGGTGGAGAAAGAGGAGTTCCCTTTCCCTCGAAATGAGAACTTTATTGGCAGGAAGAAGGAACTCTCTGAGCTGGAATTCATACTTTTTGGTGATGTCAGTGGAGAAGCAGAAAGAGATTATTTTGAGCTTAAGGCTAGGCCTAGACGAAAGAACTTGACAATTGGGTGGGGTAGGAGCAGTTCATTTGATGAAAGGCGAAGGGAACGAAAACTGGAGATTGGAAGCAGAAAGGGAAAAGAACCAGTTGTGTGGAAGGAGTCAGAGAAAGAGATTGAGATGCAAAGCACAGAAATTCCTCAAAGACAATCAAAGCCCAAAAGTGGTGGAAGATATTCAAGGAGAAAAAGATCAACAAAGGTTGTGTATGGGAAGGGGATTGCTTGTGTGTCGGGGGACTCGGGAATTGGCAAGACGGAACTTCTTCTTGAATTTGCCTACAGATATCACCAGAAGTACAAGATGGTTTTATGGATAGGAGGGGAAAGTAGGTATATTAGGCAAAACTACTTGAATCTCTGGTCGTTTCTAGAAGTCGATGTAGGGGTTGAAAATTGCTTTGACAAAAACAGAATCAAAAGCTTTGAAGAACAGGAAGACACAGCCATAGCTAGAGTACGCAGAGAACTCATGAGAAACATGCCATTTTTGGTGGTGATTGATAACTTAGAAAGTGAAAAGGATTGGTGGGACCACAAACTTGTAATGGATCTTCTTCCCCGTTTTGGTGGAGAGACGCACATAATAATATCCACACGCCTTCCTTCTGTGATGAATTTGGAGCCTTTGAAACTCTCGTACTTATCCGGGGCAGAAGCAATGTCGCTCATGCAGGGTAGCGTAAAAGAATACACAGAAAATGAAGAATTGGATGCTTTACGGGCTATTGAGGAGAAAGTGGGACGCTCAACCTTGGGACTTTCTATTGTAGGTGCAATATTGTCTGAGCTGCCCATACTTCCAAGTAAGCTGTTGGAAACAACTAATAGAATGCCATTAAAAGAATTTTCATGGAGTAGCAGGGGGACTAATTCGTTGAGGCGGCATACTTTCCTTATGCAACTCCTCGAGGTGTGTTTCTCGATTTTTGATCACGCAGACGGACCGAGGAGCTTGTCAACGAGAATGGTCCAGGCAAGTACTTGGTTTGCACCGGCCGCGATTCCAGTTTCTTTGTTGGCCCAAGCTGCTCACAAGATACCTGAAAAGCATCAAGGGACGTGGTTATGGAGAAAGCTGATGAAGTCTTTAACTTGTGGCTTTACTTCATCATACACCAAAAAATCAGAAGCAGAAGCGACTTCCATGTTGTTAAGGTTTAACATTGCCAGAAGCAGCACCAGGCAGGACCATATCCATTTCCATGAACTCGTCAAGCTTTATGCTCGCAAGAGAGTTGCGAGCGGAGTTGCACAAGCGATGGTTCAAGCTGTTATCAGCCGTGGATCAATATCTCAACACTCAGAACATATCTGGGCAGCCTGTTTCTTAATATTTGGATTCAGCCATGACCCTGTGGTCGTTGAGCTTAAGGTTTCGGACCTGCTGTATCTTGTCAAGGAAGTGGTTTTGCCTCTTGCAATACGGGCCTTCATAACATTCTCTCGTTGCAATGCTGCCCTAGAACTCCTCCGCCTATGCACCAATGCCCTGGAAGCAGCGGACCAAGCGTTTGTAACCCCAGTTGAGAAGTGGCTCGATAAATCACTTTGTTGGAGGCCGATCCAGACTAATGCTCAGCTGAATCCTTATCTTTGGCAGGAGCTTGCGCTATCAAGAGCCACAGTGCTAGAAACTAGGGCCAAGCTGATGCTAAGAGGGGGACAATTCGACATAGCTGATGATCTAATTAGGAAGGCGCTTTTTATCAGAACTTCTGTTTGTGGTGAAGATCATAAAGACACTGTAGCTGCTCGCGAAACTCTTAGCAAAGTCACCAGGCTTCTTGCAAATGTTCAAATTCATACTTCACCCTCCAGAGTTTTTGAAGGATTGTTCGATGATGACTTGCGGGAGTCGGGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR TIR_2

Protein Analysis

1016

Amino Acids

115.55

Weight (kDa)

9.13

Isoelectric Point (pI)

50.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_plant_disease PF25895 702 - 813 5e-46 Winged Helix Domain in plant disease resistance proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2537
AbsI CCTCGAGG 1 cut(s) 2087
Acc36I ACCTGC 1 cut(s) 2571
AccBSI CCGCTC 1 cut(s) 2424
AccI GTMKAC 1 cut(s) 996
AccII CGCG 3 cut(s) 315, 2180, 2937
AciI CCGC 7 cut(s) 313, 2062, 2178, 2424, 2653, 2681, 3031
AclWI GGATC 4 cut(s) 185, 1737, 2473, 2737
AcoI YGGCCR 2 cut(s) 505, 2175
AcsI RAATTY 7 cut(s) 213, 1097, 1314, 1451, 1795, 2024, 2979
AcuI CTGAAG 1 cut(s) 267
AfaI GTAC 5 cut(s) 187, 1478, 1638, 1820, 2161
AfiI CCNNNNNNNGG 5 cut(s) 370, 781, 892, 1343, 1745
AflII CTTAAG 2 cut(s) 1151, 2549
AflIII ACRYGT 1 cut(s) 261
AgeI ACCGGT 1 cut(s) 999
AhdI GACNNNNNGTC 1 cut(s) 316
AjiI CACGTC 1 cut(s) 2241
AjnI CCWGG 7 cut(s) 368, 412, 763, 2151, 2360, 2670, 2957
Alw21I GWGCWC 1 cut(s) 595
Alw26I GTCTC 3 cut(s) 292, 423, 1748
AlwI GGATC 4 cut(s) 185, 1737, 2473, 2737
Ama87I CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
ApeKI GCWGC 8 cut(s) 278, 1969, 2207, 2355, 2498, 2636, 2678, 2930
ApoI RAATTY 7 cut(s) 213, 1097, 1314, 1451, 1795, 2024, 2979
ArsI GACNNNNNNTTYG 2 cut(s) 2675, 2707
AsiGI ACCGGT 1 cut(s) 999
Asp700I GAANNNNTTC 4 cut(s) 680, 876, 1354, 1443
AspLEI GCGC 2 cut(s) 2791, 2881
AsuC2I CCSGG 3 cut(s) 892, 893, 1828
AsuHPI GGTGA 9 cut(s) 258, 305, 779, 1124, 1460, 1687, 2918, 2947, 2982
AsuNHI GCTAGC 1 cut(s) 722
AvaI CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
AvaII GGWCC 8 cut(s) 446, 739, 1711, 2123, 2149, 2368, 2560, 2683
BanII GRGCYC 1 cut(s) 595
BarI GAAGNNNNNNTAC 2 cut(s) 1716, 1748
BbsI GAAGAC 2 cut(s) 312, 1623
Bbv12I GWGCWC 1 cut(s) 595
BbvCI CCTCAGC 1 cut(s) 524
BbvI GCAGC 8 cut(s) 265, 1956, 2194, 2367, 2510, 2623, 2690, 2917
BccI CCATC 5 cut(s) 133, 707, 917, 1477, 2434
BceAI ACGGC 3 cut(s) 492, 938, 2445
BcgI CGANNNNNNTGC 2 cut(s) 81, 115
BciT130I CCWGG 7 cut(s) 370, 414, 765, 2153, 2362, 2672, 2959
BclI TGATCA 1 cut(s) 2110
BcnI CCSGG 3 cut(s) 892, 893, 1828
BcoDI GTCTC 3 cut(s) 292, 423, 1748
BfmI CTRYAG 2 cut(s) 1459, 2925
BfoI RGCGCY 1 cut(s) 2882
BfrI CTTAAG 2 cut(s) 1151, 2549
BfuAI ACCTGC 1 cut(s) 2571
BlpI GCTNAGC 1 cut(s) 2757
BmcAI AGTACT 1 cut(s) 2161
Bme18I GGWCC 8 cut(s) 446, 739, 1711, 2123, 2149, 2368, 2560, 2683
BmeRI GACNNNNNGTC 1 cut(s) 316
BmeT110I CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
BmgBI CACGTC 1 cut(s) 2241
BmiI GGNNCC 5 cut(s) 273, 542, 741, 1712, 1803
BmrI ACTGGG 1 cut(s) 2696
BmsI GCATC 5 cut(s) 148, 1290, 1882, 2239, 2820
BmtI GCTAGC 1 cut(s) 726
BmuI ACTGGG 1 cut(s) 2696
BpiI GAAGAC 2 cut(s) 312, 1623
BpmI CTGGAG 4 cut(s) 447, 952, 1256, 2980
Bpu10I CCTNAGC 2 cut(s) 524, 918
Bpu1102I GCTNAGC 1 cut(s) 2757
BpuMI CCSGG 3 cut(s) 892, 893, 1828
BsaBI GATNNNNATC 3 cut(s) 124, 662, 2470
BsaJI CCNNGG 9 cut(s) 369, 413, 636, 891, 1827, 1932, 2126, 2461, 2670
BsaWI WCCGGW 2 cut(s) 448, 999
BsaXI ACNNNNNCTCC 4 cut(s) 925, 955, 973, 1003
Bsc4I CCNNNNNNNGG 5 cut(s) 370, 781, 892, 1343, 1745
Bse118I RCCGGY 4 cut(s) 40, 268, 999, 2173
Bse1I ACTGG 6 cut(s) 97, 935, 1239, 1265, 2186, 2702
Bse3DI GCAATG 3 cut(s) 1845, 2343, 2638
Bse8I GATNNNNATC 3 cut(s) 124, 662, 2470
BseBI CCWGG 7 cut(s) 370, 414, 765, 2153, 2362, 2672, 2959
BseDI CCNNGG 9 cut(s) 369, 413, 636, 891, 1827, 1932, 2126, 2461, 2670
BseGI GGATG 5 cut(s) 573, 663, 904, 928, 1897
BseJI GATNNNNATC 3 cut(s) 124, 662, 2470
BseLI CCNNNNNNNGG 5 cut(s) 370, 781, 892, 1343, 1745
BseMI GCAATG 3 cut(s) 1845, 2343, 2638
BseMII CTCAG 9 cut(s) 211, 303, 464, 515, 932, 1080, 1956, 2496, 2771
BseNI ACTGG 6 cut(s) 97, 935, 1239, 1265, 2186, 2702
BseRI GAGGAG 8 cut(s) 490, 816, 997, 1049, 1925, 2075, 2143, 2639
BseX3I CGGCCG 1 cut(s) 2175
BseXI GCAGC 8 cut(s) 265, 1956, 2194, 2367, 2510, 2623, 2690, 2917
BseYI CCCAGC 1 cut(s) 274
Bsh1236I CGCG 3 cut(s) 315, 2180, 2937
Bsh1285I CGRYCG 1 cut(s) 2178
BshTI ACCGGT 1 cut(s) 999
BsiEI CGRYCG 1 cut(s) 2178
BsiHKAI GWGCWC 1 cut(s) 595
BsiHKCI CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
BsiSI CCGG 7 cut(s) 41, 269, 449, 892, 1000, 1827, 2174
BslFI GGGAC 8 cut(s) 725, 1430, 1724, 1935, 1950, 2059, 2251, 2856
BslI CCNNNNNNNGG 5 cut(s) 370, 781, 892, 1343, 1745
BsmAI GTCTC 3 cut(s) 292, 423, 1748
BsmBI CGTCTC 1 cut(s) 1748
BsmFI GGGAC 8 cut(s) 725, 1430, 1724, 1935, 1950, 2059, 2251, 2856
BsmI GAATGC 3 cut(s) 80, 345, 2016
BsoBI CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
Bsp1286I GDGCHC 1 cut(s) 595
Bsp143I GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
Bsp1720I GCTNAGC 1 cut(s) 2757
Bsp19I CCATGG 1 cut(s) 636
Bsp68I TCGCGA 1 cut(s) 2937
BspACI CCGC 7 cut(s) 313, 2062, 2178, 2424, 2653, 2681, 3031
BspCNI CTCAG 9 cut(s) 210, 302, 465, 516, 931, 1081, 1957, 2495, 2770
BspFNI CGCG 3 cut(s) 315, 2180, 2937
BspHI TCATGA 1 cut(s) 1650
BspLI GGNNCC 5 cut(s) 273, 542, 741, 1712, 1803
BspMI ACCTGC 1 cut(s) 2571
BspOI GCTAGC 1 cut(s) 726
BspPI GGATC 4 cut(s) 185, 1737, 2473, 2737
BspQI GCTCTTC 1 cut(s) 882
BspTI CTTAAG 2 cut(s) 1151, 2549
BsrBI CCGCTC 1 cut(s) 2424
BsrDI GCAATG 3 cut(s) 1845, 2343, 2638
BsrFI RCCGGY 4 cut(s) 40, 268, 999, 2173
BsrI ACTGG 6 cut(s) 97, 935, 1239, 1265, 2186, 2702
BssAI RCCGGY 4 cut(s) 40, 268, 999, 2173
BssECI CCNNGG 9 cut(s) 369, 413, 636, 891, 1827, 1932, 2126, 2461, 2670
BssMI GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
BssT1I CCWWGG 2 cut(s) 636, 1932
Bst2UI CCWGG 7 cut(s) 370, 414, 765, 2153, 2362, 2672, 2959
Bst4CI ACNGT 2 cut(s) 2806, 2926
Bst6I CTCTTC 2 cut(s) 791, 882
BstAFI CTTAAG 2 cut(s) 1151, 2549
BstC8I GCNNGC 5 cut(s) 724, 2407, 2422, 2787, 2935
BstDSI CCRYGG 2 cut(s) 636, 2461
BstF5I GGATG 5 cut(s) 573, 663, 904, 928, 1897
BstFNI CGCG 3 cut(s) 315, 2180, 2937
BstH2I RGCGCY 1 cut(s) 2882
BstHHI GCGC 2 cut(s) 2791, 2881
BstKTI GATC 9 cut(s) 122, 193, 1373, 1732, 2113, 2468, 2745, 2866, 2914
BstMAI GTCTC 3 cut(s) 292, 423, 1748
BstMBI GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
BstMCI CGRYCG 1 cut(s) 2178
BstMWI GCNNNNNNNGC 8 cut(s) 278, 409, 1901, 2177, 2207, 2606, 2675, 2687
BstNI CCWGG 7 cut(s) 370, 414, 765, 2153, 2362, 2672, 2959
BstNSI RCATGY 2 cut(s) 265, 1663
BstSFI CTRYAG 2 cut(s) 1459, 2925
BstUI CGCG 3 cut(s) 315, 2180, 2937
BstV1I GCAGC 8 cut(s) 265, 1956, 2194, 2367, 2510, 2623, 2690, 2917
BstV2I GAAGAC 2 cut(s) 312, 1623
BstX2I RGATCY 2 cut(s) 190, 1729
BstXI CCANNNNNNTGG 2 cut(s) 1272, 2671
BstYI RGATCY 2 cut(s) 190, 1729
BstZI CGGCCG 1 cut(s) 2175
BtgI CCRYGG 2 cut(s) 636, 2461
BtgZI GCGATG 1 cut(s) 2453
BtrI CACGTC 1 cut(s) 2241
BtsCI GGATG 5 cut(s) 573, 663, 904, 928, 1897
BtsIMutI CAGTG 3 cut(s) 1126, 2811, 2922
BtuMI TCGCGA 1 cut(s) 2937
BveI ACCTGC 1 cut(s) 2571
Cac8I GCNNGC 5 cut(s) 724, 2407, 2422, 2787, 2935
CciI TCATGA 1 cut(s) 1650
CfoI GCGC 2 cut(s) 2791, 2881
Cfr10I RCCGGY 4 cut(s) 40, 268, 999, 2173
Cfr9I CCCGGG 1 cut(s) 891
CpoI CGGWCCG 1 cut(s) 2123
CseI GACGC 3 cut(s) 749, 1765, 1932
Csp6I GTAC 5 cut(s) 186, 1477, 1637, 1819, 2160
CspAI ACCGGT 1 cut(s) 999
CspCI CAANNNNNGTGG 4 cut(s) 1327, 1362, 2222, 2257
CspI CGGWCCG 1 cut(s) 2123
CviQI GTAC 5 cut(s) 186, 1477, 1637, 1819, 2160
DpnI GATC 9 cut(s) 121, 192, 1372, 1731, 2112, 2467, 2744, 2865, 2913
DpnII GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
DrdI GACNNNNNNGTC 1 cut(s) 2537
DriI GACNNNNNGTC 1 cut(s) 316
DseDI GACNNNNNNGTC 1 cut(s) 2537
EaeI YGGCCR 2 cut(s) 505, 2175
EagI CGGCCG 1 cut(s) 2175
Eam1104I CTCTTC 2 cut(s) 791, 882
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 2 cut(s) 791, 882
EciI GGCGGA 1 cut(s) 2642
Ecl136II GAGCTC 1 cut(s) 593
EclXI CGGCCG 1 cut(s) 2175
Eco130I CCWWGG 2 cut(s) 636, 1932
Eco147I AGGCCT 2 cut(s) 412, 1162
Eco24I GRGCYC 1 cut(s) 595
Eco32I GATATC 3 cut(s) 7, 787, 1466
Eco47I GGWCC 8 cut(s) 446, 739, 1711, 2123, 2149, 2368, 2560, 2683
Eco52I CGGCCG 1 cut(s) 2175
Eco53kI GAGCTC 1 cut(s) 593
Eco57I CTGAAG 1 cut(s) 267
Eco88I CYCGRG 5 cut(s) 22, 854, 891, 1420, 2087
EcoICRI GAGCTC 1 cut(s) 593
EcoRI GAATTC 2 cut(s) 213, 1097
EcoRII CCWGG 7 cut(s) 368, 412, 763, 2151, 2360, 2670, 2957
EcoRV GATATC 3 cut(s) 7, 787, 1466
EcoT14I CCWWGG 2 cut(s) 636, 1932
EcoT38I GRGCYC 1 cut(s) 595
ErhI CCWWGG 2 cut(s) 636, 1932
Esp3I CGTCTC 1 cut(s) 1748
FalI AAGNNNNNCTT 4 cut(s) 719, 751, 861, 893
FaqI GGGAC 8 cut(s) 725, 1430, 1724, 1935, 1950, 2059, 2251, 2856
FauI CCCGC 1 cut(s) 3024
FauNDI CATATG 1 cut(s) 3044
FbaI TGATCA 1 cut(s) 2110
FblI GTMKAC 1 cut(s) 996
FokI GGATG 5 cut(s) 580, 650, 911, 935, 1904
FriOI GRGCYC 1 cut(s) 595
GlaI GCGC 2 cut(s) 2790, 2880
GsaI CCCAGC 1 cut(s) 278
GsuI CTGGAG 4 cut(s) 447, 952, 1256, 2980
HaeII RGCGCY 1 cut(s) 2882
HapII CCGG 7 cut(s) 41, 269, 449, 892, 1000, 1827, 2174
HgaI GACGC 3 cut(s) 749, 1765, 1932
HhaI GCGC 2 cut(s) 2791, 2881
Hin6I GCGC 2 cut(s) 2789, 2879
HinP1I GCGC 2 cut(s) 2789, 2879
HincII GTYRAC 2 cut(s) 134, 2139
HindII GTYRAC 2 cut(s) 134, 2139
HindIII AAGCTT 2 cut(s) 1600, 2396
HpaII CCGG 7 cut(s) 41, 269, 449, 892, 1000, 1827, 2174
HphI GGTGA 9 cut(s) 258, 305, 779, 1124, 1460, 1687, 2918, 2947, 2982
Hpy166II GTNNAC 5 cut(s) 66, 134, 512, 997, 2139
Hpy8I GTNNAC 5 cut(s) 66, 134, 512, 997, 2139
HpyCH4III ACNGT 2 cut(s) 2806, 2926
HpyCH4IV ACGT 2 cut(s) 642, 2240
HpyF10VI GCNNNNNNNGC 8 cut(s) 278, 409, 1901, 2177, 2207, 2606, 2675, 2687
HpySE526I ACGT 2 cut(s) 642, 2240
HspAI GCGC 2 cut(s) 2789, 2879
Ksp22I TGATCA 1 cut(s) 2110
Kzo9I GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
LguI GCTCTTC 1 cut(s) 882
LmnI GCTCC 7 cut(s) 166, 477, 546, 1197, 1801, 2130, 2782
Lsp1109I GCAGC 8 cut(s) 265, 1956, 2194, 2367, 2510, 2623, 2690, 2917
LweI GCATC 5 cut(s) 148, 1290, 1882, 2239, 2820
MaeII ACGT 2 cut(s) 642, 2240
MaeIII GTNAC 6 cut(s) 264, 356, 926, 955, 2695, 2953
MalI GATC 9 cut(s) 121, 192, 1372, 1731, 2112, 2467, 2744, 2865, 2913
MbiI CCGCTC 1 cut(s) 2424
MboI GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 2 cut(s) 190, 1729
MhlI GDGCHC 1 cut(s) 595
MlyI GAGTC 5 cut(s) 425, 846, 1289, 1412, 3044
MmeI TCCRAC 3 cut(s) 534, 1974, 2714
MroXI GAANNNNTTC 4 cut(s) 680, 876, 1354, 1443
MslI CAYNNNNRTG 2 cut(s) 363, 2382
MspA1I CMGCKG 3 cut(s) 278, 2681, 2761
MspCI CTTAAG 2 cut(s) 1151, 2549
MspI CCGG 7 cut(s) 41, 269, 449, 892, 1000, 1827, 2174
MunI CAATTG 1 cut(s) 1182
Mva1269I GAATGC 3 cut(s) 80, 345, 2016
MvaI CCWGG 7 cut(s) 370, 414, 765, 2153, 2362, 2672, 2959
MvnI CGCG 3 cut(s) 315, 2180, 2937
MwoI GCNNNNNNNGC 8 cut(s) 278, 409, 1901, 2177, 2207, 2606, 2675, 2687
NciI CCSGG 3 cut(s) 892, 893, 1828
NcoI CCATGG 1 cut(s) 636
NdeI CATATG 1 cut(s) 3044
NdeII GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
NheI GCTAGC 1 cut(s) 722
NlaIV GGNNCC 5 cut(s) 273, 542, 741, 1712, 1803
NmuCI GTSAC 4 cut(s) 264, 356, 955, 2953
NruI TCGCGA 1 cut(s) 2937
NspI RCATGY 2 cut(s) 265, 1663
PaeR7I CTCGAG 3 cut(s) 22, 854, 2087
PagI TCATGA 1 cut(s) 1650
PceI AGGCCT 2 cut(s) 412, 1162
PciI ACATGT 1 cut(s) 261
PciSI GCTCTTC 1 cut(s) 882
PctI GAATGC 3 cut(s) 80, 345, 2016
PdmI GAANNNNTTC 4 cut(s) 680, 876, 1354, 1443
PfeI GAWTC 7 cut(s) 143, 227, 1534, 1593, 2182, 2520, 2764
PinAI ACCGGT 1 cut(s) 999
PleI GAGTC 5 cut(s) 425, 846, 1288, 1412, 3043
PpsI GAGTC 5 cut(s) 425, 846, 1288, 1412, 3043
PscI ACATGT 1 cut(s) 261
Psp124BI GAGCTC 1 cut(s) 595
Psp6I CCWGG 7 cut(s) 368, 412, 763, 2151, 2360, 2670, 2957
PspFI CCCAGC 1 cut(s) 274
PspGI CCWGG 7 cut(s) 368, 412, 763, 2151, 2360, 2670, 2957
PspN4I GGNNCC 5 cut(s) 273, 542, 741, 1712, 1803
PspXI VCTCGAGB 2 cut(s) 22, 2087
PsrI GAACNNNNNNTAC 2 cut(s) 1186, 1218
PsuI RGATCY 2 cut(s) 190, 1729
PvuII CAGCTG 2 cut(s) 278, 2761
RruI TCGCGA 1 cut(s) 2937
RsaI GTAC 5 cut(s) 187, 1478, 1638, 1820, 2161
RsaNI GTAC 5 cut(s) 186, 1477, 1637, 1819, 2160
RseI CAYNNNNRTG 2 cut(s) 363, 2382
Rsr2I CGGWCCG 1 cut(s) 2123
RsrII CGGWCCG 1 cut(s) 2123
SacI GAGCTC 1 cut(s) 595
SapI GCTCTTC 1 cut(s) 882
Sau3AI GATC 9 cut(s) 119, 190, 1370, 1729, 2110, 2465, 2742, 2863, 2911
ScaI AGTACT 1 cut(s) 2161
SchI GAGTC 5 cut(s) 425, 846, 1289, 1412, 3044
SduI GDGCHC 1 cut(s) 595
SfaNI GCATC 5 cut(s) 148, 1290, 1882, 2239, 2820
SfcI CTRYAG 2 cut(s) 1459, 2925
Sfr274I CTCGAG 3 cut(s) 22, 854, 2087
SinI GGWCC 8 cut(s) 446, 739, 1711, 2123, 2149, 2368, 2560, 2683
SlaI CTCGAG 3 cut(s) 22, 854, 2087
SmaI CCCGGG 1 cut(s) 893
SmiMI CAYNNNNRTG 2 cut(s) 363, 2382
SmlI CTYRAG 5 cut(s) 22, 854, 1151, 2087, 2549
SmoI CTYRAG 5 cut(s) 22, 854, 1151, 2087, 2549
SseBI AGGCCT 2 cut(s) 412, 1162
SsiI CCGC 7 cut(s) 313, 2062, 2178, 2424, 2653, 2681, 3031
SspI AATATT 3 cut(s) 747, 1959, 2514
SstI GAGCTC 1 cut(s) 595
StuI AGGCCT 2 cut(s) 412, 1162
StyI CCWWGG 2 cut(s) 636, 1932
TaaI ACNGT 2 cut(s) 2806, 2926
TaiI ACGT 2 cut(s) 645, 2243
TaqII GACCGA 1 cut(s) 2140
TatI WGTACW 3 cut(s) 185, 1476, 2159
TauI GCSGC 2 cut(s) 2065, 2180
TfiI GAWTC 7 cut(s) 143, 227, 1534, 1593, 2182, 2520, 2764
TscAI CASTG 3 cut(s) 1126, 2811, 2929
TseFI GTSAC 4 cut(s) 264, 356, 955, 2953
TseI GCWGC 8 cut(s) 278, 1969, 2207, 2355, 2498, 2636, 2678, 2930
Tsp45I GTSAC 4 cut(s) 264, 356, 955, 2953
TspGWI ACGGA 2 cut(s) 1451, 2136
TspMI CCCGGG 1 cut(s) 891
TspRI CASTG 3 cut(s) 1126, 2811, 2929
Vha464I CTTAAG 2 cut(s) 1151, 2549
VpaK11BI GGWCC 8 cut(s) 446, 739, 1711, 2123, 2149, 2368, 2560, 2683
XapI RAATTY 7 cut(s) 213, 1097, 1314, 1451, 1795, 2024, 2979
XbaI TCTAGA 1 cut(s) 1549
XceI RCATGY 2 cut(s) 265, 1663
XcmI CCANNNNNNNNNTGG 1 cut(s) 2709
XhoI CTCGAG 3 cut(s) 22, 854, 2087
XmaI CCCGGG 1 cut(s) 891
XmiI GTMKAC 1 cut(s) 996
XmnI GAANNNNTTC 4 cut(s) 680, 876, 1354, 1443
ZrmI AGTACT 1 cut(s) 2161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.