Rorug07G0038400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0007429
Physical Location & Seq
Reverse (-)
2703818 .. 2706208
2391 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0038400.1

Sequence Viewer

Length: 2391 bp
ATGGCAGATGCACTCCACCTGTTCGATGTAATTCCTGATAGAAATGTGATCTCTTGGAATTTCATGGTTTCGGGTTATAACAGGAGCTCGATGTTTGAGAATTCATGGGGAGTGTTCTGCAGGATGCGTTGTTCGGGTTTTGAGCCTGATGAGTTTACTTATGGGAGTGTTCTTTCGGCTTGCACTGCCTTGCAAGCTTCTAGTTTGGGTGAGCAGGTTTATTCGCTTGCAATGAAAAATGGGTTCTTTAGTAGTGATTATGTTCGGTCTGGAATGATAGACCTGTTTGCCAAAAGTGGCAGCTTTGAGGATGCTTTGAGGGTGTTTCGTGATGTTTCGTGTTGGAATGTTGTGATTTGGAACGGTGTTATCTCTGCGGCTGTGAGAAATGGAGAGAACGGAGTTGCGCTGGACCTTTTTCGACAAATGTGTTGTGGGTTTTTGTTGCCGAATAGCTTTACGTTTTCTAGTGTTTTGACTGCCTGTGCTGCACTTGGTGAAATTGGGATTGGGAGGGAGGTCCAAGGGTGGGTAATTAAGCGTGGTGCAGAAGATGTGTTTGTTGGGACTGCCATTGTAGACTTATATTCCAAATGTGGAAACATGAATGAAGCTGTCAAGGAATTCTCCCGTATGCCAACACGTAATGTGGTGTCTTGGACTGCCATCATTTCTGGTTTTGTGGGGAAGGGCGATTCTATCTCTGGCCTCAAGTTTTTCAGAGAAATGAGAAGAATGGGAGAGGAAATAAATAAGTTTACTATTACTAGCGTACTCACTGCATGTGCTAAACCATCCATGAGTGAAGAGGCAATCCAAATCCATTCACTGATATTAAAATCTGGGCTCTATTCAGCTGCAGAAGTTGGATCCGCTTTAATTAATGCGTATTCAAAAATAGGAGCAGTTGATGTATCTGAAATGGTGTTCAGGGAGATGAGAACTTTAAAGGATCTGGGTACATGGGCTGCAATGATATCTTCTTTTGCGCAGAATCAAAATCCTGAAAGCGCAATTGGAGTTTTCCAGAGAATGTTACAGGAAAGTGTGAGACCAGATAAGTTTTCTACTTCTAGTGTCTTGAGTATTATAGACTATTTAGGTGTAGGGAGGCAGATACATAGCTACACTCTTAAAGTTGGGTTGGCCTTTGACGCTTCTGTTGGTAGTTCACTTTCCACAATGTATTCGAAATGCGATAGTCTAGAGGAATCTTACAAGGCATTTCAGCAAATTCGTGACAAAGACAATGTTTCATGGGCTTCAATGATTGCCGGTTTTTCAGAACATGGCTTTGCAGATCAAGCCCTTCAGTTATATCGAGAGATGCCATACAAAGAAATAATACCTGATCAGATGACTTTAGCTGCAATTCTAACTGCATGTTCTGCTTCTCGTTCCTTACTGATTGGTAAGGAAATTCATGGTCATGCTCTTCGTGCTGGAGTTGGAAGAGATGTAGTTGTTGGTGGTGCAATTGTGAACATGTACTCAAAATGCAGTGCTCTAGAATTGGCAAGGAGGGTGTTTGATATGCTTCCTCAAAAGGATGAAGTTGCATGTTCTTCACTGGTTTCAGGTTATGCCCAAAATGGGTGCATTGAAGAGGCACTTTTGCTGTTCCATTATATGCTGATGGCTGATTTGACCATTGATTCCTTCACAATTTCATCCATTCTTGGGGTCATTGCACTTTTGAATAATCCAAGTATTGGAACTCAAATGCATGCCCACATCACAAAAATTGGTTTGAATTCAGATGTTTCTGTTGGGAGCTCACTAGTGAGAATGTACTCAAAATGTGGAAGCATTGAAGATTGCCGGAAATCATTTGATCAAATCGAGAACCCTGACTTAATTTGCTGGACAGCTATGATTGCAAGCTATGCTCAGCATGGGAAAGGTGCAGAGGCTTTAAGAGGCTACGAGCTTTTGAAGGAAGAAGGAATCAAACCTGATTCAGTGACTTTTGTTGCAGTTTTATCTGCTTGTAGCCATAACGGATTGGTTGAAGAAGCTTATTTCTACTTCAATTCAATGGCTGCTGATTATGGACTTAAGCCTGGTTATCGTCACTATGCCTGTATGGTTGATGTTCTTGGCCGATCAGGGAGGCTGAAAGAGGCTGAGAGGTTCATTATCAATATGCCTATTGAACCTAACGGTTTAATATGGGGAACACTGCTTGCTGCTTGTGTGATGCATAGATATGTAGAGCTTGGAAAGTTAACAGCTAAAAAGATTATGGATTTGGAGCCATATGATGCTAGCACATATGTTTCCCTTTCAAACATGTGTGCAGATTTGGGCCTGTGGGAAGAAGCCGAGCAGATTAGAAACCAGATGAGGGGAAATTGTATGAGGAAGGAACCTGGTTGGAGCTTAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR TIR_2

Protein Analysis

796

Amino Acids

87.58

Weight (kDa)

5.62

Isoelectric Point (pI)

38.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 14 - 61 1.8e-09 PPR repeat family
PPR_2 PF13041 116 - 163 1.3e-08 PPR repeat family
PPR_2 PF13041 215 - 264 2.6e-09 PPR repeat family
PPR_2 PF13041 416 - 462 5.8e-06 PPR repeat family
PPR_2 PF13041 617 - 665 3.1e-09 PPR repeat family
E_motif PF20431 736 - 796 6.4e-11 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
Acc16I TGCGCA 1 cut(s) 990
Acc36I ACCTGC 1 cut(s) 205
AccB7I CCANNNNNTGG 1 cut(s) 1712
AccI GTMKAC 1 cut(s) 579
AciI CCGC 2 cut(s) 377, 873
AclWI GGATC 3 cut(s) 864, 877, 960
AcoI YGGCCR 1 cut(s) 2101
AcsI RAATTY 6 cut(s) 58, 100, 623, 1233, 1419, 1753
AcuI CTGAAG 1 cut(s) 1295
AdeI CACNNNGTG 1 cut(s) 497
AfaI GTAC 4 cut(s) 774, 961, 1490, 1793
AfiI CCNNNNNNNGG 5 cut(s) 529, 1593, 1680, 1712, 2347
AflII CTTAAG 1 cut(s) 2057
AflIII ACRYGT 3 cut(s) 641, 1485, 2292
AhlI ACTAGT 1 cut(s) 1780
AjnI CCWGG 2 cut(s) 2062, 2371
AjuI GAANNNNNNNTTGG 4 cut(s) 492, 524, 999, 1031
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
Alw21I GWGCWC 3 cut(s) 89, 1507, 1778
Alw26I GTCTC 1 cut(s) 1045
AlwI GGATC 3 cut(s) 864, 877, 960
AoxI GGCC 4 cut(s) 706, 1146, 2101, 2308
ApeKI GCWGC 7 cut(s) 300, 488, 857, 968, 1367, 2042, 2189
ApoI RAATTY 6 cut(s) 58, 100, 623, 1233, 1419, 1753
AseI ATTAAT 1 cut(s) 882
AspLEI GCGC 3 cut(s) 409, 991, 1013
AspS9I GGNCC 3 cut(s) 412, 520, 2308
AsuHPI GGTGA 2 cut(s) 221, 509
AsuII TTCGAA 1 cut(s) 1190
AsuNHI GCTAGC 1 cut(s) 2267
AvaII GGWCC 2 cut(s) 412, 520
BamHI GGATCC 1 cut(s) 869
BanII GRGCYC 3 cut(s) 89, 849, 1778
Bbv12I GWGCWC 3 cut(s) 89, 1507, 1778
BbvI GCAGC 7 cut(s) 312, 475, 844, 955, 1354, 2029, 2176
BccI CCATC 3 cut(s) 674, 802, 1630
BciT130I CCWGG 2 cut(s) 2064, 2373
BclI TGATCA 2 cut(s) 1351, 1834
BcoDI GTCTC 1 cut(s) 1045
BcuI ACTAGT 1 cut(s) 1780
BfaI CTAG 8 cut(s) 201, 468, 768, 1074, 1205, 1508, 1781, 2268
BfmI CTRYAG 2 cut(s) 118, 858
BfrI CTTAAG 1 cut(s) 2057
BfuAI ACCTGC 1 cut(s) 205
BisI GCNGC 8 cut(s) 301, 378, 489, 858, 969, 1368, 2043, 2190
BlpI GCTNAGC 1 cut(s) 1890
BlsI GCNGC 8 cut(s) 302, 379, 490, 859, 970, 1369, 2044, 2191
Bme1390I CCNGG 2 cut(s) 2064, 2373
Bme18I GGWCC 2 cut(s) 412, 520
BmgT120I GGNCC 3 cut(s) 412, 520, 2308
BmiI GGNNCC 3 cut(s) 871, 2256, 2370
BmrFI CCNGG 2 cut(s) 2064, 2373
BmsI GCATC 5 cut(s) 114, 301, 1317, 2190, 2254
BmtI GCTAGC 1 cut(s) 2271
BpmI CTGGAG 1 cut(s) 1464
Bpu1102I GCTNAGC 1 cut(s) 1890
Bpu14I TTCGAA 1 cut(s) 1190
BpuEI CTTGAG 2 cut(s) 695, 1102
BsaAI YACGTR 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 1045
BsaJI CCNNGG 1 cut(s) 523
Bsc4I CCNNNNNNNGG 5 cut(s) 529, 1593, 1680, 1712, 2347
Bse118I RCCGGY 1 cut(s) 1274
Bse1I ACTGG 1 cut(s) 1575
Bse3DI GCAATG 3 cut(s) 237, 978, 1686
BseBI CCWGG 2 cut(s) 2064, 2373
BseDI CCNNGG 1 cut(s) 523
BseGI GGATG 5 cut(s) 129, 316, 794, 1555, 1670
BseLI CCNNNNNNNGG 5 cut(s) 529, 1593, 1680, 1712, 2347
BseMI GCAATG 3 cut(s) 237, 978, 1686
BseMII CTCAG 2 cut(s) 1904, 2118
BseNI ACTGG 1 cut(s) 1575
BseXI GCAGC 7 cut(s) 312, 475, 844, 955, 1354, 2029, 2176
BsgI GTGCAG 4 cut(s) 474, 567, 1926, 2319
BshFI GGCC 4 cut(s) 708, 1148, 2103, 2310
BsiHKAI GWGCWC 3 cut(s) 89, 1507, 1778
BsiSI CCGG 2 cut(s) 1275, 1822
BslFI GGGAC 1 cut(s) 580
BslI CCNNNNNNNGG 5 cut(s) 529, 1593, 1680, 1712, 2347
BsmAI GTCTC 1 cut(s) 1045
BsmFI GGGAC 1 cut(s) 580
BsnI GGCC 4 cut(s) 708, 1148, 2103, 2310
Bso31I GGTCTC 1 cut(s) 1045
Bsp119I TTCGAA 1 cut(s) 1190
Bsp1286I GDGCHC 4 cut(s) 89, 849, 1507, 1778
Bsp143I GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
Bsp1720I GCTNAGC 1 cut(s) 1890
BspACI CCGC 2 cut(s) 377, 873
BspANI GGCC 4 cut(s) 708, 1148, 2103, 2310
BspCNI CTCAG 2 cut(s) 1903, 2119
BspLI GGNNCC 3 cut(s) 871, 2256, 2370
BspMAI CTGCAG 2 cut(s) 122, 862
BspMI ACCTGC 1 cut(s) 205
BspOI GCTAGC 1 cut(s) 2271
BspPI GGATC 3 cut(s) 864, 877, 960
BspQI GCTCTTC 1 cut(s) 1440
BspT104I TTCGAA 1 cut(s) 1190
BspTI CTTAAG 1 cut(s) 2057
BspTNI GGTCTC 1 cut(s) 1045
BsrDI GCAATG 3 cut(s) 237, 978, 1686
BsrFI RCCGGY 1 cut(s) 1274
BsrI ACTGG 1 cut(s) 1575
BssAI RCCGGY 1 cut(s) 1274
BssECI CCNNGG 1 cut(s) 523
BssMI GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
BssT1I CCWWGG 1 cut(s) 523
Bst2UI CCWGG 2 cut(s) 2064, 2373
Bst4CI ACNGT 2 cut(s) 365, 2165
Bst6I CTCTTC 4 cut(s) 801, 1440, 1447, 1599
BstAFI CTTAAG 1 cut(s) 2057
BstAPI GCANNNNNTGC 2 cut(s) 1388, 1886
BstBAI YACGTR 1 cut(s) 644
BstBI TTCGAA 1 cut(s) 1190
BstC8I GCNNGC 7 cut(s) 181, 195, 228, 1728, 1882, 2187, 2269
BstDEI CTNAG 3 cut(s) 1890, 2127, 2383
BstF5I GGATG 5 cut(s) 129, 316, 794, 1555, 1670
BstHHI GCGC 3 cut(s) 409, 991, 1013
BstKTI GATC 7 cut(s) 51, 872, 955, 1303, 1354, 1837, 2108
BstMAI GTCTC 1 cut(s) 1045
BstMBI GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
BstMWI GCNNNNNNNGC 9 cut(s) 185, 194, 488, 1154, 1304, 1388, 1439, 1877, 1886
BstNI CCWGG 2 cut(s) 2064, 2373
BstNSI RCATGY 6 cut(s) 786, 1386, 1489, 1563, 1730, 2296
BstSCI CCNGG 2 cut(s) 2062, 2371
BstSFI CTRYAG 2 cut(s) 118, 858
BstV1I GCAGC 7 cut(s) 312, 475, 844, 955, 1354, 2029, 2176
BstX2I RGATCY 2 cut(s) 869, 952
BstYI RGATCY 2 cut(s) 869, 952
BsuRI GGCC 4 cut(s) 708, 1148, 2103, 2310
BtsCI GGATG 5 cut(s) 129, 316, 794, 1555, 1670
BtsI GCAGTG 4 cut(s) 183, 777, 1507, 2180
BtsIMutI CAGTG 7 cut(s) 183, 777, 827, 1507, 1568, 1968, 2180
BveI ACCTGC 1 cut(s) 205
Cac8I GCNNGC 7 cut(s) 181, 195, 228, 1728, 1882, 2187, 2269
CfoI GCGC 3 cut(s) 409, 991, 1013
Cfr10I RCCGGY 1 cut(s) 1274
Cfr13I GGNCC 3 cut(s) 412, 520, 2308
CseI GACGC 1 cut(s) 1163
CsiI ACCWGGT 1 cut(s) 2371
Csp6I GTAC 4 cut(s) 773, 960, 1489, 1792
CviQI GTAC 4 cut(s) 773, 960, 1489, 1792
DdeI CTNAG 3 cut(s) 1890, 2127, 2383
DpnI GATC 7 cut(s) 50, 871, 954, 1302, 1353, 1836, 2107
DpnII GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
DraI TTTAAA 1 cut(s) 948
DraIII CACNNNGTG 1 cut(s) 497
EaeI YGGCCR 1 cut(s) 2101
Eam1104I CTCTTC 4 cut(s) 801, 1440, 1447, 1599
EarI CTCTTC 4 cut(s) 801, 1440, 1447, 1599
Ecl136II GAGCTC 2 cut(s) 87, 1776
Eco130I CCWWGG 1 cut(s) 523
Eco24I GRGCYC 3 cut(s) 89, 849, 1778
Eco31I GGTCTC 1 cut(s) 1045
Eco32I GATATC 1 cut(s) 978
Eco47I GGWCC 2 cut(s) 412, 520
Eco53kI GAGCTC 2 cut(s) 87, 1776
Eco57I CTGAAG 1 cut(s) 1295
EcoICRI GAGCTC 2 cut(s) 87, 1776
EcoRI GAATTC 3 cut(s) 100, 623, 1753
EcoRII CCWGG 2 cut(s) 2062, 2371
EcoRV GATATC 1 cut(s) 978
EcoT14I CCWWGG 1 cut(s) 523
EcoT22I ATGCAT 2 cut(s) 1728, 2205
EcoT38I GRGCYC 3 cut(s) 89, 849, 1778
ErhI CCWWGG 1 cut(s) 523
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 1 cut(s) 580
FauNDI CATATG 2 cut(s) 2260, 2275
FbaI TGATCA 2 cut(s) 1351, 1834
FblI GTMKAC 1 cut(s) 579
Fnu4HI GCNGC 8 cut(s) 301, 378, 489, 858, 969, 1368, 2043, 2190
FokI GGATG 5 cut(s) 136, 323, 781, 1562, 1657
FriOI GRGCYC 3 cut(s) 89, 849, 1778
Fsp4HI GCNGC 8 cut(s) 301, 378, 489, 858, 969, 1368, 2043, 2190
FspBI CTAG 8 cut(s) 201, 468, 768, 1074, 1205, 1508, 1781, 2268
FspI TGCGCA 1 cut(s) 990
GlaI GCGC 3 cut(s) 408, 990, 1012
GluI GCNGC 8 cut(s) 301, 378, 489, 858, 969, 1368, 2043, 2190
GsuI CTGGAG 1 cut(s) 1464
HaeIII GGCC 4 cut(s) 708, 1148, 2103, 2310
HapII CCGG 2 cut(s) 1275, 1822
HgaI GACGC 1 cut(s) 1163
HhaI GCGC 3 cut(s) 409, 991, 1013
Hin6I GCGC 3 cut(s) 407, 989, 1011
HinP1I GCGC 3 cut(s) 407, 989, 1011
HincII GTYRAC 1 cut(s) 2229
HindII GTYRAC 1 cut(s) 2229
HindIII AAGCTT 2 cut(s) 195, 2016
HinfI GANTC 6 cut(s) 695, 994, 1211, 1655, 1947, 1958
HpaI GTTAAC 1 cut(s) 2229
HpaII CCGG 2 cut(s) 1275, 1822
HphI GGTGA 2 cut(s) 221, 509
Hpy166II GTNNAC 6 cut(s) 156, 580, 759, 1172, 1483, 2229
Hpy188I TCNGA 5 cut(s) 722, 919, 1285, 1356, 1759
Hpy8I GTNNAC 6 cut(s) 156, 580, 759, 1172, 1483, 2229
HpyAV CCTTC 6 cut(s) 682, 1319, 1669, 1930, 1937, 2359
HpyCH4III ACNGT 2 cut(s) 365, 2165
HpyCH4IV ACGT 2 cut(s) 461, 643
HpyF10VI GCNNNNNNNGC 9 cut(s) 185, 194, 488, 1154, 1304, 1388, 1439, 1877, 1886
HpyF3I CTNAG 3 cut(s) 1890, 2127, 2383
HpySE526I ACGT 2 cut(s) 461, 643
HspAI GCGC 3 cut(s) 407, 989, 1011
Ksp22I TGATCA 2 cut(s) 1351, 1834
KspAI GTTAAC 1 cut(s) 2229
Kzo9I GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
LguI GCTCTTC 1 cut(s) 1440
LmnI GCTCC 5 cut(s) 84, 902, 1773, 2254, 2379
Lsp1109I GCAGC 7 cut(s) 312, 475, 844, 955, 1354, 2029, 2176
LweI GCATC 5 cut(s) 114, 301, 1317, 2190, 2254
MabI ACCWGGT 1 cut(s) 2371
MaeI CTAG 8 cut(s) 201, 468, 768, 1074, 1205, 1508, 1781, 2268
MaeII ACGT 2 cut(s) 461, 643
MaeIII GTNAC 4 cut(s) 1035, 1238, 1963, 2072
MalI GATC 7 cut(s) 50, 871, 954, 1302, 1353, 1836, 2107
MboI GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
MfeI CAATTG 2 cut(s) 1014, 1476
MflI RGATCY 2 cut(s) 869, 952
MhlI GDGCHC 4 cut(s) 89, 849, 1507, 1778
MmeI TCCRAC 4 cut(s) 323, 847, 1429, 2357
Mph1103I ATGCAT 2 cut(s) 1728, 2205
MslI CAYNNNNRTG 2 cut(s) 1428, 2208
MspA1I CMGCKG 1 cut(s) 857
MspCI CTTAAG 1 cut(s) 2057
MspI CCGG 2 cut(s) 1275, 1822
MspR9I CCNGG 2 cut(s) 2064, 2373
MunI CAATTG 2 cut(s) 1014, 1476
MvaI CCWGG 2 cut(s) 2064, 2373
MwoI GCNNNNNNNGC 9 cut(s) 185, 194, 488, 1154, 1304, 1388, 1439, 1877, 1886
NdeI CATATG 2 cut(s) 2260, 2275
NdeII GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
NheI GCTAGC 1 cut(s) 2267
NlaIV GGNNCC 3 cut(s) 871, 2256, 2370
NmeAIII GCCGAG 1 cut(s) 2350
NmuCI GTSAC 3 cut(s) 1238, 1963, 2072
NsbI TGCGCA 1 cut(s) 990
NsiI ATGCAT 2 cut(s) 1728, 2205
NspI RCATGY 6 cut(s) 786, 1386, 1489, 1563, 1730, 2296
NspV TTCGAA 1 cut(s) 1190
PacI TTAATTAA 1 cut(s) 882
PaeI GCATGC 1 cut(s) 1730
PciI ACATGT 2 cut(s) 1485, 2292
PciSI GCTCTTC 1 cut(s) 1440
PfeI GAWTC 6 cut(s) 695, 994, 1211, 1655, 1947, 1958
PflMI CCANNNNNTGG 1 cut(s) 1712
PkrI GCNGC 8 cut(s) 302, 379, 490, 859, 970, 1369, 2044, 2191
Ppu21I YACGTR 1 cut(s) 644
PscI ACATGT 2 cut(s) 1485, 2292
PshBI ATTAAT 1 cut(s) 882
PsiI TTATAA 1 cut(s) 78
Psp124BI GAGCTC 2 cut(s) 89, 1778
Psp6I CCWGG 2 cut(s) 2062, 2371
PspGI CCWGG 2 cut(s) 2062, 2371
PspN4I GGNNCC 3 cut(s) 871, 2256, 2370
PspPI GGNCC 3 cut(s) 412, 520, 2308
PstI CTGCAG 2 cut(s) 122, 862
PsuI RGATCY 2 cut(s) 869, 952
PvuII CAGCTG 1 cut(s) 857
RsaI GTAC 4 cut(s) 774, 961, 1490, 1793
RsaNI GTAC 4 cut(s) 773, 960, 1489, 1792
RseI CAYNNNNRTG 2 cut(s) 1428, 2208
SacI GAGCTC 2 cut(s) 89, 1778
SapI GCTCTTC 1 cut(s) 1440
SatI GCNGC 8 cut(s) 301, 378, 489, 858, 969, 1368, 2043, 2190
Sau3AI GATC 7 cut(s) 48, 869, 952, 1300, 1351, 1834, 2105
Sau96I GGNCC 3 cut(s) 412, 520, 2308
ScrFI CCNGG 2 cut(s) 2064, 2373
SduI GDGCHC 4 cut(s) 89, 849, 1507, 1778
SexAI ACCWGGT 1 cut(s) 2371
SfaNI GCATC 5 cut(s) 114, 301, 1317, 2190, 2254
SfcI CTRYAG 2 cut(s) 118, 858
SfuI TTCGAA 1 cut(s) 1190
SinI GGWCC 2 cut(s) 412, 520
SmiMI CAYNNNNRTG 2 cut(s) 1428, 2208
SmlI CTYRAG 3 cut(s) 710, 1081, 2057
SmoI CTYRAG 3 cut(s) 710, 1081, 2057
SpeI ACTAGT 1 cut(s) 1780
SphI GCATGC 1 cut(s) 1730
SsiI CCGC 2 cut(s) 377, 873
SspMI CTAG 8 cut(s) 201, 468, 768, 1074, 1205, 1508, 1781, 2268
SstI GAGCTC 2 cut(s) 89, 1778
StyD4I CCNGG 2 cut(s) 2062, 2371
StyI CCWWGG 1 cut(s) 523
TaaI ACNGT 2 cut(s) 365, 2165
TaiI ACGT 2 cut(s) 464, 646
TaqI TCGA 6 cut(s) 24, 89, 421, 1190, 1321, 1842
TaqII GACCGA 1 cut(s) 255
TatI WGTACW 2 cut(s) 1488, 1791
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 6 cut(s) 695, 994, 1211, 1655, 1947, 1958
TscAI CASTG 7 cut(s) 190, 784, 834, 1507, 1575, 1968, 2187
TseFI GTSAC 3 cut(s) 1238, 1963, 2072
TseI GCWGC 7 cut(s) 300, 488, 857, 968, 1367, 2042, 2189
Tsp45I GTSAC 3 cut(s) 1238, 1963, 2072
TspGWI ACGGA 2 cut(s) 414, 2016
TspRI CASTG 7 cut(s) 190, 784, 834, 1507, 1575, 1968, 2187
Van91I CCANNNNNTGG 1 cut(s) 1712
Vha464I CTTAAG 1 cut(s) 2057
VpaK11BI GGWCC 2 cut(s) 412, 520
VspI ATTAAT 1 cut(s) 882
XapI RAATTY 6 cut(s) 58, 100, 623, 1233, 1419, 1753
XbaI TCTAGA 2 cut(s) 1204, 1507
XceI RCATGY 6 cut(s) 786, 1386, 1489, 1563, 1730, 2296
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 8 cut(s) 201, 468, 768, 1074, 1205, 1508, 1781, 2268
Zsp2I ATGCAT 2 cut(s) 1728, 2205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.