MD14G1119600.v1.1

Belongs to the glucose-6-phosphate 1-epimerase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0011703
Physical Location & Seq
Forward (+)
19372007 .. 19373641
1635 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1119600.v1.1.491

Sequence Viewer

Length: 894 bp
ATGAATGATTCTGGATCAGCAGTTGAAGTTTCGAAGGACAAGAATGGAATCGATCAAGTTCATCTTCAGAACCCGCGAGGAGCCTCTGTTCGGGTGAGCTTGCACGGAGGCCAGGTTCTGTCATGGAAAACCGAACGCAACGAAGAATTGTTGTTCATTAGTAGCAAGGCGATTTTTAAGCCTCCAAAAGCAGTCCGAGGAGGAATTCCAATCTGTTTTCCGCAGGTTGGGACCGGATCGTTGGACCATAACGGGTTTGCCAGGAATAGGATTTGGGCCATTGACAATGATCCTCCACCTCTACGTCCGAATGATTCGAATGGAAAAGCCTACGTTGACTTGCTGCTCAAACCATCCGACGATGATATGAAGATCTGGCCACATAGTTTTGAGTTTCGCCTTAGGGTGTCACTGGCAGCCGAAGGGCATCTAACGCTTATATCGCGCATCAGGAACATCAACTGCAAGCCTTTCAGCTTCGCGTTTGCTTATCATACGTACTTCTCCATTTCGGATATCAGTGAAGTGAGGATTGAGGGATTGGAGACTCTAGACTATCTAGACAACCTGTGTCAAAAGGAGCGATTTACAGAACAAGGCGATGCCTTAACATTCGAATCTGAGGTGGACCGCGCTTATCTCAAGTCTTCGGATGTGATAGCTGTTTTCGATCATGAAAAGAAGAAGACATTCACCGTGCGAAAGGAGGGACTTCCAGATGTTGTTGTATGGAATCCATGGGAGAAGAAGTCCAAAGCGATGGCGGATCTTGGAGACGAAGAATACAAACAGATGCTGTGTGTTAACGGAGCATCAATCGAGAAGCCGATCACCTTGAAGCCCGGCGAGGAATGGACCGGTCGATTGGAGCTCTCTCTTGTCCCTTCCAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

298

Amino Acids

33.42

Weight (kDa)

5.87

Isoelectric Point (pI)

26.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldose_epim PF01263 18 - 291 2.4e-66 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011703)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23730 AT4G23730 AT4G23730
fragaria_vesca FvH4_5g03890 FvH4_5g03890
malus_domestica MD06G1100000.v1.1 MD14G1119600.v1.1
prunus_persica Prupe.5G113600_v2.0.a1 Prupe.5G113600_v2.0.a1
pyrus_communis pycom06g09530
rosa_chinensis RchiOBHm_Chr7g0195621
rosa_laevigata RLG00000004104
rosa_multiflora Rmu_ssc0000078.1_g000016
rosa_roxburghii Rroxscaffold_3G00260300
rosa_rugosa Rorug07G0025000
rosa_samantha Rh7AG152500 Rh7CG157700 Rh7DG153500
rosa_wichuraiana Rw7G013040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 214
AccII CGCG 4 cut(s) 76, 445, 482, 633
AciI CCGC 4 cut(s) 74, 221, 631, 764
AclWI GGATC 4 cut(s) 22, 244, 284, 774
AcoI YGGCCR 1 cut(s) 377
AcsI RAATTY 1 cut(s) 204
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 1 cut(s) 500
AfiI CCNNNNNNNGG 3 cut(s) 90, 227, 267
AgeI ACCGGT 1 cut(s) 857
AgsI TTSAA 2 cut(s) 26, 838
AjnI CCWGG 2 cut(s) 111, 260
AloI GAACNNNNNNTCC 4 cut(s) 72, 99, 104, 131
AluBI AGCT 4 cut(s) 99, 477, 662, 871
AluI AGCT 4 cut(s) 99, 477, 662, 871
Alw21I GWGCWC 1 cut(s) 873
Alw26I GTCTC 2 cut(s) 539, 768
AlwI GGATC 4 cut(s) 22, 244, 284, 774
AlwNI CAGNNNCTG 2 cut(s) 118, 796
AoxI GGCC 3 cut(s) 109, 276, 377
ApeKI GCWGC 2 cut(s) 343, 416
ApoI RAATTY 1 cut(s) 204
AsiGI ACCGGT 1 cut(s) 857
Asp700I GAANNNNTTC 1 cut(s) 689
AspLEI GCGC 2 cut(s) 447, 635
AspS9I GGNCC 5 cut(s) 231, 244, 276, 628, 855
AsuC2I CCSGG 1 cut(s) 843
AsuHPI GGTGA 3 cut(s) 106, 685, 823
AsuII TTCGAA 3 cut(s) 32, 317, 615
AvaII GGWCC 4 cut(s) 231, 244, 628, 855
AxyI CCTNAGG 1 cut(s) 401
BalI TGGCCA 1 cut(s) 379
BanII GRGCYC 1 cut(s) 873
BbsI GAAGAC 2 cut(s) 639, 692
Bbv12I GWGCWC 1 cut(s) 873
BbvI GCAGC 2 cut(s) 330, 428
BccI CCATC 2 cut(s) 361, 754
BciT130I CCWGG 2 cut(s) 113, 262
BcnI CCSGG 1 cut(s) 843
BcoDI GTCTC 2 cut(s) 539, 768
BfaI CTAG 2 cut(s) 551, 560
BfuAI ACCTGC 1 cut(s) 214
BglII AGATCT 1 cut(s) 372
BisI GCNGC 2 cut(s) 344, 417
BlsI GCNGC 2 cut(s) 345, 418
Bme1390I CCNGG 3 cut(s) 113, 262, 843
Bme18I GGWCC 4 cut(s) 231, 244, 628, 855
BmgT120I GGNCC 5 cut(s) 231, 244, 276, 628, 855
BmiI GGNNCC 2 cut(s) 82, 232
BmrFI CCNGG 3 cut(s) 113, 262, 843
BmsI GCATC 5 cut(s) 436, 456, 592, 783, 821
BpiI GAAGAC 2 cut(s) 639, 692
Bpu14I TTCGAA 3 cut(s) 32, 317, 615
BpuEI CTTGAG 1 cut(s) 626
BpuMI CCSGG 1 cut(s) 843
Bsa29I ATCGAT 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 498
BsaJI CCNNGG 2 cut(s) 196, 737
BsaWI WCCGGW 2 cut(s) 233, 857
BsaXI ACNNNNNCTCC 6 cut(s) 72, 99, 102, 129, 734, 764
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 227, 267
Bse118I RCCGGY 1 cut(s) 857
Bse1I ACTGG 2 cut(s) 417, 888
Bse21I CCTNAGG 1 cut(s) 401
BseBI CCWGG 2 cut(s) 113, 262
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 2 cut(s) 196, 737
BseGI GGATG 2 cut(s) 353, 658
BseLI CCNNNNNNNGG 3 cut(s) 90, 227, 267
BseMII CTCAG 1 cut(s) 612
BseNI ACTGG 2 cut(s) 417, 888
BseRI GAGGAG 2 cut(s) 93, 213
BseXI GCAGC 2 cut(s) 330, 428
Bsh1236I CGCG 4 cut(s) 76, 445, 482, 633
Bsh1285I CGRYCG 1 cut(s) 862
BshFI GGCC 3 cut(s) 111, 278, 379
BshTI ACCGGT 1 cut(s) 857
BshVI ATCGAT 1 cut(s) 51
BsiEI CGRYCG 1 cut(s) 862
BsiHKAI GWGCWC 1 cut(s) 873
BsiSI CCGG 3 cut(s) 234, 843, 858
BslFI GGGAC 3 cut(s) 244, 723, 866
BslI CCNNNNNNNGG 3 cut(s) 90, 227, 267
BsmAI GTCTC 2 cut(s) 539, 768
BsmBI CGTCTC 1 cut(s) 768
BsmFI GGGAC 3 cut(s) 244, 723, 866
BsnI GGCC 3 cut(s) 111, 278, 379
Bsp119I TTCGAA 3 cut(s) 32, 317, 615
Bsp1286I GDGCHC 1 cut(s) 873
Bsp143I GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
Bsp19I CCATGG 1 cut(s) 737
BspACI CCGC 4 cut(s) 74, 221, 631, 764
BspANI GGCC 3 cut(s) 111, 278, 379
BspCNI CTCAG 1 cut(s) 613
BspDI ATCGAT 1 cut(s) 51
BspFNI CGCG 4 cut(s) 76, 445, 482, 633
BspHI TCATGA 1 cut(s) 673
BspLI GGNNCC 2 cut(s) 82, 232
BspMI ACCTGC 1 cut(s) 214
BspPI GGATC 4 cut(s) 22, 244, 284, 774
BspT104I TTCGAA 3 cut(s) 32, 317, 615
BsrFI RCCGGY 1 cut(s) 857
BsrI ACTGG 2 cut(s) 417, 888
BssAI RCCGGY 1 cut(s) 857
BssECI CCNNGG 2 cut(s) 196, 737
BssMI GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
BssT1I CCWWGG 1 cut(s) 737
Bst2UI CCWGG 2 cut(s) 113, 262
Bst4CI ACNGT 1 cut(s) 697
BstBAI YACGTR 1 cut(s) 498
BstBI TTCGAA 3 cut(s) 32, 317, 615
BstC8I GCNNGC 2 cut(s) 101, 467
BstDEI CTNAG 2 cut(s) 401, 621
BstDSI CCRYGG 1 cut(s) 737
BstF5I GGATG 2 cut(s) 353, 658
BstFNI CGCG 4 cut(s) 76, 445, 482, 633
BstHHI GCGC 2 cut(s) 447, 635
BstKTI GATC 8 cut(s) 17, 55, 239, 292, 375, 673, 769, 831
BstMAI GTCTC 2 cut(s) 539, 768
BstMBI GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
BstMCI CGRYCG 1 cut(s) 862
BstMWI GCNNNNNNNGC 2 cut(s) 433, 442
BstNI CCWGG 2 cut(s) 113, 262
BstSCI CCNGG 3 cut(s) 111, 260, 841
BstSNI TACGTA 1 cut(s) 498
BstUI CGCG 4 cut(s) 76, 445, 482, 633
BstV1I GCAGC 2 cut(s) 330, 428
BstV2I GAAGAC 2 cut(s) 639, 692
BstX2I RGATCY 2 cut(s) 372, 766
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 2 cut(s) 372, 766
Bsu15I ATCGAT 1 cut(s) 51
Bsu36I CCTNAGG 1 cut(s) 401
BsuRI GGCC 3 cut(s) 111, 278, 379
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 1 cut(s) 737
BtgZI GCGATG 2 cut(s) 615, 773
BtsCI GGATG 2 cut(s) 353, 658
BtsIMutI CAGTG 2 cut(s) 410, 526
BveI ACCTGC 1 cut(s) 214
Cac8I GCNNGC 2 cut(s) 101, 467
CaiI CAGNNNCTG 2 cut(s) 118, 796
CciI TCATGA 1 cut(s) 673
CfoI GCGC 2 cut(s) 447, 635
Cfr10I RCCGGY 1 cut(s) 857
Cfr13I GGNCC 5 cut(s) 231, 244, 276, 628, 855
ClaI ATCGAT 1 cut(s) 51
Csp6I GTAC 1 cut(s) 499
CspAI ACCGGT 1 cut(s) 857
CviAII CATG 3 cut(s) 123, 674, 738
CviQI GTAC 1 cut(s) 499
DdeI CTNAG 2 cut(s) 401, 621
DpnI GATC 8 cut(s) 16, 54, 238, 291, 374, 672, 768, 830
DpnII GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
EaeI YGGCCR 1 cut(s) 377
EciI GGCGGA 1 cut(s) 779
Ecl136II GAGCTC 1 cut(s) 871
Eco105I TACGTA 1 cut(s) 498
Eco130I CCWWGG 1 cut(s) 737
Eco24I GRGCYC 1 cut(s) 873
Eco32I GATATC 1 cut(s) 517
Eco47I GGWCC 4 cut(s) 231, 244, 628, 855
Eco53kI GAGCTC 1 cut(s) 871
Eco57I CTGAAG 1 cut(s) 50
Eco81I CCTNAGG 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 871
EcoRI GAATTC 1 cut(s) 204
EcoRII CCWGG 2 cut(s) 111, 260
EcoRV GATATC 1 cut(s) 517
EcoT14I CCWWGG 1 cut(s) 737
EcoT38I GRGCYC 1 cut(s) 873
ErhI CCWWGG 1 cut(s) 737
Esp3I CGTCTC 1 cut(s) 768
FaeI CATG 3 cut(s) 126, 677, 741
FaiI YATR 9 cut(s) 124, 249, 368, 384, 440, 495, 675, 730, 739
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FaqI GGGAC 3 cut(s) 244, 723, 866
FatI CATG 3 cut(s) 122, 673, 737
FauI CCCGC 1 cut(s) 81
Fnu4HI GCNGC 2 cut(s) 344, 417
FokI GGATG 2 cut(s) 340, 665
FriOI GRGCYC 1 cut(s) 873
Fsp4HI GCNGC 2 cut(s) 344, 417
FspBI CTAG 2 cut(s) 551, 560
GlaI GCGC 2 cut(s) 446, 634
GluI GCNGC 2 cut(s) 344, 417
HaeIII GGCC 3 cut(s) 111, 278, 379
HapII CCGG 3 cut(s) 234, 843, 858
HhaI GCGC 2 cut(s) 447, 635
Hin1II CATG 3 cut(s) 126, 677, 741
Hin6I GCGC 2 cut(s) 445, 633
HinP1I GCGC 2 cut(s) 445, 633
HincII GTYRAC 2 cut(s) 337, 805
HindII GTYRAC 2 cut(s) 337, 805
HinfI GANTC 6 cut(s) 8, 48, 314, 547, 617, 733
HpaI GTTAAC 1 cut(s) 805
HpaII CCGG 3 cut(s) 234, 843, 858
HphI GGTGA 3 cut(s) 106, 685, 823
Hpy166II GTNNAC 3 cut(s) 337, 628, 805
Hpy188I TCNGA 7 cut(s) 69, 197, 309, 358, 514, 622, 652
Hpy188III TCNNGA 7 cut(s) 12, 451, 551, 560, 674, 716, 820
Hpy8I GTNNAC 3 cut(s) 337, 628, 805
Hpy99I CGWCG 1 cut(s) 362
HpyAV CCTTC 3 cut(s) 28, 416, 894
HpyCH4III ACNGT 1 cut(s) 697
HpyCH4IV ACGT 3 cut(s) 304, 333, 497
HpyCH4V TGCA 2 cut(s) 103, 465
HpyF10VI GCNNNNNNNGC 2 cut(s) 433, 442
HpyF3I CTNAG 2 cut(s) 401, 621
HpySE526I ACGT 3 cut(s) 304, 333, 497
Hsp92II CATG 3 cut(s) 126, 677, 741
HspAI GCGC 2 cut(s) 445, 633
KspAI GTTAAC 1 cut(s) 805
Kzo9I GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
LmnI GCTCC 4 cut(s) 80, 580, 809, 868
Lsp1109I GCAGC 2 cut(s) 330, 428
LweI GCATC 5 cut(s) 436, 456, 592, 783, 821
MaeI CTAG 2 cut(s) 551, 560
MaeII ACGT 3 cut(s) 304, 333, 497
MaeIII GTNAC 1 cut(s) 408
MalI GATC 8 cut(s) 16, 54, 238, 291, 374, 672, 768, 830
MboI GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
MboII GAAGA 8 cut(s) 56, 155, 382, 639, 694, 697, 757, 791
MflI RGATCY 2 cut(s) 372, 766
MhlI GDGCHC 1 cut(s) 873
MlsI TGGCCA 1 cut(s) 379
MluCI AATT 2 cut(s) 146, 204
MluNI TGGCCA 1 cut(s) 379
MlyI GAGTC 1 cut(s) 541
MmeI TCCRAC 2 cut(s) 222, 381
Mox20I TGGCCA 1 cut(s) 379
MroXI GAANNNNTTC 1 cut(s) 689
MscI TGGCCA 1 cut(s) 379
MseI TTAA 4 cut(s) 177, 608, 804, 892
Msp20I TGGCCA 1 cut(s) 379
MspI CCGG 3 cut(s) 234, 843, 858
MspR9I CCNGG 3 cut(s) 113, 262, 843
MvaI CCWGG 2 cut(s) 113, 262
MvnI CGCG 4 cut(s) 76, 445, 482, 633
MwoI GCNNNNNNNGC 2 cut(s) 433, 442
NciI CCSGG 1 cut(s) 843
NcoI CCATGG 1 cut(s) 737
NdeII GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
NlaIII CATG 3 cut(s) 126, 677, 741
NlaIV GGNNCC 2 cut(s) 82, 232
NmuCI GTSAC 1 cut(s) 408
NspV TTCGAA 3 cut(s) 32, 317, 615
PagI TCATGA 1 cut(s) 673
PdmI GAANNNNTTC 1 cut(s) 689
PfeI GAWTC 5 cut(s) 8, 48, 314, 617, 733
PinAI ACCGGT 1 cut(s) 857
PkrI GCNGC 2 cut(s) 345, 418
PleI GAGTC 1 cut(s) 541
PpsI GAGTC 1 cut(s) 541
Ppu21I YACGTR 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 873
Psp6I CCWGG 2 cut(s) 111, 260
PspGI CCWGG 2 cut(s) 111, 260
PspN4I GGNNCC 2 cut(s) 82, 232
PspPI GGNCC 5 cut(s) 231, 244, 276, 628, 855
PstNI CAGNNNCTG 2 cut(s) 118, 796
PsuI RGATCY 2 cut(s) 372, 766
RsaI GTAC 1 cut(s) 500
RsaNI GTAC 1 cut(s) 499
SacI GAGCTC 1 cut(s) 873
SaqAI TTAA 4 cut(s) 177, 608, 804, 892
SatI GCNGC 2 cut(s) 344, 417
Sau3AI GATC 8 cut(s) 14, 52, 236, 289, 372, 670, 766, 828
Sau96I GGNCC 5 cut(s) 231, 244, 276, 628, 855
SchI GAGTC 1 cut(s) 541
ScrFI CCNGG 3 cut(s) 113, 262, 843
SduI GDGCHC 1 cut(s) 873
SfaNI GCATC 5 cut(s) 436, 456, 592, 783, 821
SfuI TTCGAA 3 cut(s) 32, 317, 615
SinI GGWCC 4 cut(s) 231, 244, 628, 855
SmlI CTYRAG 1 cut(s) 641
SmoI CTYRAG 1 cut(s) 641
SnaBI TACGTA 1 cut(s) 498
Sse9I AATT 2 cut(s) 146, 204
SsiI CCGC 4 cut(s) 74, 221, 631, 764
SspMI CTAG 2 cut(s) 551, 560
SstI GAGCTC 1 cut(s) 873
StyD4I CCNGG 3 cut(s) 111, 260, 841
StyI CCWWGG 1 cut(s) 737
TaaI ACNGT 1 cut(s) 697
TaiI ACGT 3 cut(s) 307, 336, 500
TaqI TCGA 7 cut(s) 32, 51, 317, 615, 669, 819, 862
TasI AATT 2 cut(s) 146, 204
TfiI GAWTC 5 cut(s) 8, 48, 314, 617, 733
Tru1I TTAA 4 cut(s) 177, 608, 804, 892
Tru9I TTAA 4 cut(s) 177, 608, 804, 892
TscAI CASTG 2 cut(s) 417, 526
TseFI GTSAC 1 cut(s) 408
TseI GCWGC 2 cut(s) 343, 416
Tsp45I GTSAC 1 cut(s) 408
TspDTI ATGAA 5 cut(s) 17, 50, 145, 383, 690
TspGWI ACGGA 2 cut(s) 120, 822
TspRI CASTG 2 cut(s) 417, 526
VpaK11BI GGWCC 4 cut(s) 231, 244, 628, 855
XapI RAATTY 1 cut(s) 204
XbaI TCTAGA 2 cut(s) 550, 559
XmnI GAANNNNTTC 1 cut(s) 689
XspI CTAG 2 cut(s) 551, 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.