Prupe.5G113600_v2.0.a1

Belongs to the glucose-6-phosphate 1-epimerase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
11700901 .. 11704566
3666 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G113600.2

Sequence Viewer

Length: 912 bp
ATGAATCATTCTGGAGCAACCAGTGATCAGAGAGCAGCAGTTGAAGTCTCAAAGGATAAGAGTGGAATTGACCAAGTTCTGCTTCATAACCCTCGAGGAGCTTCCGTTCAGGTTAGCTTGCACGGAGGCCAGGTTCTTTCCTGGAGGACTGAACGTGGTGAAGAACTGTTATTCATTAGTAGCAAGGCAATCTTTAAACCACCAAAAGCAGTGCGAGGAGGAATTCCAATCTGTTTTCCACAGGTTGGAAATGGATCATTGGAGCAAAACGGGTTTGCCAGGAACAGGATTTGGGTCATTGACAATGATCCTCCACCTCTACATCCCAATGATTCTAATGGCAAAGCCTACATCGACTTGCTGCTCAAACCATCCGAAGAAGATCTGAAGATTTGGCCACATAGTTTCGAGTTTCGTCTTAGAGTGTCACTGGCAGCAGAAGGGTATCTAACCCTGATATCGCGTATCAGGAACATCAATTGCAAGCCCTTCAGTTTTTCATTTGCGTATCATCCATATTTCTCCATTTCTGATATCAGCGAAGTGAGGATTGAGGGCTTGGAGACTCTTGACTACCTAGACAACCTATTTCAGAAGGAGCGCTTTACAGAACAAGGTGATGCCTTAACATTTGAATCTGAGGTCGACCGGGCTTATCTTAGGTCTAAAGATGTGATAGCTGTTTTCGATCATGAAAAGAAGAGGACATTCGCCGTACGAAAGGAGGGACTTCCAGATGTTGTTGTTTGGAATCCATGGGAGAAGAGATCCAAAGCCATAGTAGATCTTGGAGATGAAGAGTATAAACAGATGCTTTGTGTTAATGGAGCATCAATTGAGAAGCCAATCACCTTGAAGCCTGGTGAAGAATGGACTGGCAGATTGGAGCTCTCTGTTGTCCCTTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

304

Amino Acids

34.21

Weight (kDa)

5.88

Isoelectric Point (pI)

29.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011703)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 93
AccB7I CCANNNNNTGG 1 cut(s) 245
AccI GTMKAC 1 cut(s) 645
AccII CGCG 1 cut(s) 463
AclWI GGATC 3 cut(s) 262, 302, 762
AcoI YGGCCR 1 cut(s) 395
AcsI RAATTY 1 cut(s) 222
AcuI CTGAAG 2 cut(s) 407, 475
AfaI GTAC 1 cut(s) 717
AfeI AGCGCT 1 cut(s) 602
AfiI CCNNNNNNNGG 2 cut(s) 245, 285
AgsI TTSAA 4 cut(s) 44, 635, 856, 906
AjnI CCWGG 4 cut(s) 129, 140, 278, 859
AjuI GAANNNNNNNTTGG 2 cut(s) 66, 98
AloI GAACNNNNNNTCC 4 cut(s) 90, 117, 122, 149
AluBI AGCT 4 cut(s) 101, 117, 680, 889
AluI AGCT 4 cut(s) 101, 117, 680, 889
Alw21I GWGCWC 1 cut(s) 891
Alw26I GTCTC 2 cut(s) 52, 557
AlwI GGATC 3 cut(s) 262, 302, 762
Ama87I CYCGRG 1 cut(s) 93
Aor51HI AGCGCT 1 cut(s) 602
AoxI GGCC 2 cut(s) 127, 395
ApeKI GCWGC 3 cut(s) 35, 361, 434
ApoI RAATTY 1 cut(s) 222
AspLEI GCGC 1 cut(s) 603
AsuC2I CCSGG 1 cut(s) 650
AsuHPI GGTGA 4 cut(s) 170, 629, 841, 875
AvaI CYCGRG 1 cut(s) 93
BalI TGGCCA 1 cut(s) 397
BanII GRGCYC 1 cut(s) 891
Bbv12I GWGCWC 1 cut(s) 891
BbvI GCAGC 3 cut(s) 47, 348, 446
BccI CCATC 1 cut(s) 379
BceAI ACGGC 1 cut(s) 698
BciT130I CCWGG 4 cut(s) 131, 142, 280, 861
BclI TGATCA 1 cut(s) 25
BcnI CCSGG 1 cut(s) 650
BcoDI GTCTC 2 cut(s) 52, 557
BfaI CTAG 1 cut(s) 578
BfoI RGCGCY 1 cut(s) 604
BglII AGATCT 2 cut(s) 382, 784
BisI GCNGC 3 cut(s) 36, 362, 435
BlsI GCNGC 3 cut(s) 37, 363, 436
Bme1390I CCNGG 5 cut(s) 131, 142, 280, 650, 861
BmeT110I CYCGRG 1 cut(s) 93
BmrFI CCNGG 5 cut(s) 131, 142, 280, 650, 861
BmsI GCATC 3 cut(s) 610, 801, 839
BpmI CTGGAG 2 cut(s) 33, 163
BpuMI CCSGG 1 cut(s) 650
BsaJI CCNNGG 1 cut(s) 755
BsaXI ACNNNNNCTCC 4 cut(s) 90, 117, 120, 147
Bsc4I CCNNNNNNNGG 2 cut(s) 245, 285
Bse1I ACTGG 3 cut(s) 21, 435, 880
BseBI CCWGG 4 cut(s) 131, 142, 280, 861
BseDI CCNNGG 1 cut(s) 755
BseGI GGATG 3 cut(s) 322, 371, 511
BseLI CCNNNNNNNGG 2 cut(s) 245, 285
BseMII CTCAG 1 cut(s) 630
BseNI ACTGG 3 cut(s) 21, 435, 880
BseRI GAGGAG 2 cut(s) 111, 231
BseXI GCAGC 3 cut(s) 47, 348, 446
Bsh1236I CGCG 1 cut(s) 463
Bsh1285I CGRYCG 1 cut(s) 649
BshFI GGCC 2 cut(s) 129, 397
BsiEI CGRYCG 1 cut(s) 649
BsiHKAI GWGCWC 1 cut(s) 891
BsiHKCI CYCGRG 1 cut(s) 93
BsiSI CCGG 1 cut(s) 649
BsiWI CGTACG 1 cut(s) 715
BslFI GGGAC 2 cut(s) 741, 884
BslI CCNNNNNNNGG 2 cut(s) 245, 285
BsmAI GTCTC 2 cut(s) 52, 557
BsmFI GGGAC 2 cut(s) 741, 884
BsnI GGCC 2 cut(s) 129, 397
BsoBI CYCGRG 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 891
Bsp143I GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
Bsp19I CCATGG 1 cut(s) 755
BspANI GGCC 2 cut(s) 129, 397
BspCNI CTCAG 1 cut(s) 631
BspFNI CGCG 1 cut(s) 463
BspHI TCATGA 1 cut(s) 691
BspPI GGATC 3 cut(s) 262, 302, 762
BsrI ACTGG 3 cut(s) 21, 435, 880
BssECI CCNNGG 1 cut(s) 755
BssMI GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
BssT1I CCWWGG 1 cut(s) 755
Bst2UI CCWGG 4 cut(s) 131, 142, 280, 861
Bst4CI ACNGT 1 cut(s) 168
Bst6I CTCTTC 3 cut(s) 695, 758, 792
BstC8I GCNNGC 2 cut(s) 119, 485
BstDEI CTNAG 3 cut(s) 419, 639, 659
BstDSI CCRYGG 1 cut(s) 755
BstF5I GGATG 3 cut(s) 322, 371, 511
BstFNI CGCG 1 cut(s) 463
BstH2I RGCGCY 1 cut(s) 604
BstHHI GCGC 1 cut(s) 603
BstKTI GATC 7 cut(s) 28, 257, 310, 385, 691, 770, 787
BstMAI GTCTC 2 cut(s) 52, 557
BstMBI GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
BstMCI CGRYCG 1 cut(s) 649
BstNI CCWGG 4 cut(s) 131, 142, 280, 861
BstSCI CCNGG 5 cut(s) 129, 140, 278, 648, 859
BstUI CGCG 1 cut(s) 463
BstV1I GCAGC 3 cut(s) 47, 348, 446
BstX2I RGATCY 3 cut(s) 382, 767, 784
BstYI RGATCY 3 cut(s) 382, 767, 784
BsuRI GGCC 2 cut(s) 129, 397
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 3 cut(s) 322, 371, 511
BtsI GCAGTG 1 cut(s) 216
BtsIMutI CAGTG 3 cut(s) 28, 216, 428
Cac8I GCNNGC 2 cut(s) 119, 485
CciI TCATGA 1 cut(s) 691
CfoI GCGC 1 cut(s) 603
Csp6I GTAC 1 cut(s) 716
CviAII CATG 2 cut(s) 692, 756
CviQI GTAC 1 cut(s) 716
DdeI CTNAG 3 cut(s) 419, 639, 659
DpnI GATC 7 cut(s) 27, 256, 309, 384, 690, 769, 786
DpnII GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
DraI TTTAAA 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 395
Eam1104I CTCTTC 3 cut(s) 695, 758, 792
EarI CTCTTC 3 cut(s) 695, 758, 792
Ecl136II GAGCTC 1 cut(s) 889
Eco130I CCWWGG 1 cut(s) 755
Eco24I GRGCYC 1 cut(s) 891
Eco32I GATATC 2 cut(s) 459, 535
Eco47III AGCGCT 1 cut(s) 602
Eco53kI GAGCTC 1 cut(s) 889
Eco57I CTGAAG 2 cut(s) 407, 475
Eco88I CYCGRG 1 cut(s) 93
EcoICRI GAGCTC 1 cut(s) 889
EcoRI GAATTC 1 cut(s) 222
EcoRII CCWGG 4 cut(s) 129, 140, 278, 859
EcoRV GATATC 2 cut(s) 459, 535
EcoT14I CCWWGG 1 cut(s) 755
EcoT38I GRGCYC 1 cut(s) 891
ErhI CCWWGG 1 cut(s) 755
FaeI CATG 2 cut(s) 695, 759
FaiI YATR 7 cut(s) 87, 402, 517, 693, 757, 779, 804
FalI AAGNNNNNCTT 6 cut(s) 66, 98, 176, 208, 587, 619
FaqI GGGAC 2 cut(s) 741, 884
FatI CATG 2 cut(s) 691, 755
FbaI TGATCA 1 cut(s) 25
FblI GTMKAC 1 cut(s) 645
Fnu4HI GCNGC 3 cut(s) 36, 362, 435
FokI GGATG 3 cut(s) 309, 358, 498
FriOI GRGCYC 1 cut(s) 891
Fsp4HI GCNGC 3 cut(s) 36, 362, 435
FspBI CTAG 1 cut(s) 578
GlaI GCGC 1 cut(s) 602
GluI GCNGC 3 cut(s) 36, 362, 435
GsuI CTGGAG 2 cut(s) 33, 163
HaeII RGCGCY 1 cut(s) 604
HaeIII GGCC 2 cut(s) 129, 397
HapII CCGG 1 cut(s) 649
HhaI GCGC 1 cut(s) 603
Hin1II CATG 2 cut(s) 695, 759
Hin6I GCGC 1 cut(s) 601
HinP1I GCGC 1 cut(s) 601
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HinfI GANTC 5 cut(s) 4, 332, 565, 635, 751
HpaII CCGG 1 cut(s) 649
HphI GGTGA 4 cut(s) 170, 629, 841, 875
Hpy166II GTNNAC 1 cut(s) 646
Hpy188I TCNGA 6 cut(s) 30, 376, 387, 532, 594, 640
Hpy188III TCNNGA 5 cut(s) 12, 469, 569, 692, 734
Hpy8I GTNNAC 1 cut(s) 646
HpyAV CCTTC 4 cut(s) 434, 499, 589, 912
HpyCH4III ACNGT 1 cut(s) 168
HpyCH4IV ACGT 1 cut(s) 154
HpyCH4V TGCA 2 cut(s) 121, 483
HpyF3I CTNAG 3 cut(s) 419, 639, 659
HpySE526I ACGT 1 cut(s) 154
Hsp92II CATG 2 cut(s) 695, 759
HspAI GCGC 1 cut(s) 601
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
LmnI GCTCC 6 cut(s) 14, 98, 262, 598, 827, 886
Lsp1109I GCAGC 3 cut(s) 47, 348, 446
LweI GCATC 3 cut(s) 610, 801, 839
MaeI CTAG 1 cut(s) 578
MaeII ACGT 1 cut(s) 154
MaeIII GTNAC 1 cut(s) 426
MalI GATC 7 cut(s) 27, 256, 309, 384, 690, 769, 786
MboI GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
MboII GAAGA 8 cut(s) 173, 389, 392, 400, 712, 775, 809, 878
MfeI CAATTG 2 cut(s) 478, 834
MflI RGATCY 3 cut(s) 382, 767, 784
MhlI GDGCHC 1 cut(s) 891
MlsI TGGCCA 1 cut(s) 397
MluCI AATT 4 cut(s) 66, 222, 478, 834
MluNI TGGCCA 1 cut(s) 397
MlyI GAGTC 1 cut(s) 559
MmeI TCCRAC 1 cut(s) 226
Mox20I TGGCCA 1 cut(s) 397
MscI TGGCCA 1 cut(s) 397
MseI TTAA 4 cut(s) 195, 626, 822, 910
MslI CAYNNNNRTG 1 cut(s) 327
Msp20I TGGCCA 1 cut(s) 397
MspI CCGG 1 cut(s) 649
MspR9I CCNGG 5 cut(s) 131, 142, 280, 650, 861
MunI CAATTG 2 cut(s) 478, 834
MvaI CCWGG 4 cut(s) 131, 142, 280, 861
MvnI CGCG 1 cut(s) 463
NciI CCSGG 1 cut(s) 650
NcoI CCATGG 1 cut(s) 755
NdeII GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
NlaIII CATG 2 cut(s) 695, 759
NmuCI GTSAC 1 cut(s) 426
PaeR7I CTCGAG 1 cut(s) 93
PagI TCATGA 1 cut(s) 691
PfeI GAWTC 4 cut(s) 4, 332, 635, 751
Pfl23II CGTACG 1 cut(s) 715
PflMI CCANNNNNTGG 1 cut(s) 245
PfoI TCCNGGA 1 cut(s) 140
PkrI GCNGC 3 cut(s) 37, 363, 436
PleI GAGTC 1 cut(s) 559
PpsI GAGTC 1 cut(s) 559
Psp124BI GAGCTC 1 cut(s) 891
Psp6I CCWGG 4 cut(s) 129, 140, 278, 859
PspGI CCWGG 4 cut(s) 129, 140, 278, 859
PspLI CGTACG 1 cut(s) 715
PspXI VCTCGAGB 1 cut(s) 93
PsuI RGATCY 3 cut(s) 382, 767, 784
RsaI GTAC 1 cut(s) 717
RsaNI GTAC 1 cut(s) 716
RseI CAYNNNNRTG 1 cut(s) 327
SacI GAGCTC 1 cut(s) 891
SalI GTCGAC 1 cut(s) 644
SaqAI TTAA 4 cut(s) 195, 626, 822, 910
SatI GCNGC 3 cut(s) 36, 362, 435
Sau3AI GATC 7 cut(s) 25, 254, 307, 382, 688, 767, 784
SchI GAGTC 1 cut(s) 559
ScrFI CCNGG 5 cut(s) 131, 142, 280, 650, 861
SduI GDGCHC 1 cut(s) 891
SfaNI GCATC 3 cut(s) 610, 801, 839
Sfr274I CTCGAG 1 cut(s) 93
SlaI CTCGAG 1 cut(s) 93
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 1 cut(s) 93
SmoI CTYRAG 1 cut(s) 93
Sse9I AATT 4 cut(s) 66, 222, 478, 834
SspMI CTAG 1 cut(s) 578
SstI GAGCTC 1 cut(s) 891
StyD4I CCNGG 5 cut(s) 129, 140, 278, 648, 859
StyI CCWWGG 1 cut(s) 755
TaaI ACNGT 1 cut(s) 168
TaiI ACGT 1 cut(s) 157
TaqI TCGA 5 cut(s) 94, 354, 408, 645, 687
TasI AATT 4 cut(s) 66, 222, 478, 834
TfiI GAWTC 4 cut(s) 4, 332, 635, 751
Tru1I TTAA 4 cut(s) 195, 626, 822, 910
Tru9I TTAA 4 cut(s) 195, 626, 822, 910
TscAI CASTG 3 cut(s) 28, 216, 435
TseFI GTSAC 1 cut(s) 426
TseI GCWGC 3 cut(s) 35, 361, 434
Tsp45I GTSAC 1 cut(s) 426
TspDTI ATGAA 6 cut(s) 17, 74, 163, 489, 708, 810
TspGWI ACGGA 2 cut(s) 94, 138
TspRI CASTG 3 cut(s) 28, 216, 435
Van91I CCANNNNNTGG 1 cut(s) 245
XapI RAATTY 1 cut(s) 222
XhoI CTCGAG 1 cut(s) 93
XmiI GTMKAC 1 cut(s) 645
XspI CTAG 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.