MD14G1217100.v1.1

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0004415
Physical Location & Seq
Reverse (-)
30057162 .. 30062849
5688 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1217100.v1.1.491

Sequence Viewer

Length: 1719 bp
ATGGAGCTTCCTCAGCCCCGGCCGTTTGGAACGGAAGGAAGAAAATCGACGCATGATTTTCTGTCACTCTACAGTCATTCAGCTGCCCAGCAAGATCCAAGATCACCCGCTCAAGGAGGCTACCTTGAAACACACGATTTCCTACAACCACTTGAACGAATGGGAAAGCCATGCATTGCTAAGGAAGAGACCTCAGCTGAGATATCAACCACTGAAAAACCACCGTCTCAGGCGGCGGCGCAGCCGACTACTTCTGTGGAGCACATTCTCCCCGGTGGGATTGGGACTTACAGTATAAGCCACATTTCGCATTTCAATCAAGGGGTTCCGAAACCAGAGGGATCGCCGGAGTTTAAAGTTGCACAAGCAAGTAGTACCGAGAGAAACGTTGACGAAAACTCGAACTGTAGTTCTTACACCGGAAGTGGATTTACTTTGTGGGAAGAATCTGCAAAGAATAAGGGAAAGACAGGGAAGGAGAATGCTGTGGGAGAAAGACCCGCGGGTACCGTGAGAGGGCAATGGACCTCTTCGGAGCTGCCTGCGCAGTCATCTTCCAACAATCATCGCAGCTGCTTCAGTTCTCAGTCATCTGGGCAGAAGAACTTGAGCTTCATGGAGATGATGAAGTCCTCCGCCAAGGGTAGTACCCGGGAAGACGAACTTGACGATCAAGAAGAGTTTGTTCTAAAAAAAGAGACCTCTACCACTACCACCAATGCGACCACGCCCTATAAGGGCGATTTGAGGGTAAAAGTTGATGTTAAGAGCTCTGATCAGAAGGCTAACACGCCACGATCCAAACATTCTGCCACAGAGCAGCGAAGGAGGAGCAAAATAAATGACAGATTCCAAATGTTGAGAGAGCTCATTCCTCACAGTGATCAAAAGAGAGACAAGGCGTCGTTTTTACTAGAGGTTGTCGAATACATTCAGTTTTTACAGGAACGGGTAAACAAGTACGAGGGTTCATGTCAAGGATGGAATCCTGATCCAGCAAAATTGATGCCTTGGAGAAACAATCACAAGCTTAGGGAAAGTTACTGCGATCAATCTCGAGGCATGAATGGTGGGTCTGCTCCTGCATTAGCGTTTGCTGCAACGTTTGATGAGAAACCTACTTCTGTCTCACCGGCAATCCCCGGAAGCTGCGCTCAGAACCCTGTAGAATCCGACACAAGTACTGAAACTACCGTCAAAGCAGTGGATCACCACCCTGGAATAACAAGCAAGCCGATGCCCTTTCCTTTGTCAATGCAGCCAAACTTCTTCACTCCTGTCAGGACTAGTGGTGCTGCCGCCGCAGTACCTCAAATTCCACCGAGATTGCCATCTGATGCAGAGAACACATCTCGACATCAACCAATGTTATGTCAGACGATATCACGTACCACTGATGGTGCTGCTACTCGGGATAAGCTGAAAGAACAGGAGCTGACAATTGAAGGCGGTCGAATTAACATCTCAAGTGCCTACTCCCAAGGGTTATTGAATACGCTGACACAAGCCCTGCAGAGTTCCGGCGTGGATTTGTCACTGGCCAGCATCTCCGTGCAAATCGAGCTAGGGAAGCGAGCAAATAGGCGATCACCTATACCAAAATCTGCTATTAAGGAAAATGAGATTCCCATAAGCACTTTAGGGAAAAAGCACTCTGGAATTGCAAGCAGTGAAGAATCTGAACACGCCCAAAAGAAACTCAAGACATGCAGAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

573

Amino Acids

62.58

Weight (kDa)

8.45

Isoelectric Point (pI)

53.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 266 - 315 4.5e-16 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 546
Acc65I GGTACC 1 cut(s) 506
AccB1I GGYRCC 1 cut(s) 506
AccBSI CCGCTC 1 cut(s) 110
AccII CGCG 1 cut(s) 503
AciI CCGC 9 cut(s) 108, 233, 236, 501, 503, 636, 1299, 1302, 1449
AclI AACGTT 2 cut(s) 387, 1103
AclWI GGATC 5 cut(s) 89, 349, 792, 986, 1215
AcoI YGGCCR 2 cut(s) 20, 1539
AcsI RAATTY 1 cut(s) 1314
AcuI CTGAAG 1 cut(s) 562
AcyI GRCGYC 1 cut(s) 902
AfaI GTAC 7 cut(s) 376, 508, 649, 962, 1183, 1308, 1390
AfiI CCNNNNNNNGG 3 cut(s) 113, 516, 737
AgsI TTSAA 5 cut(s) 128, 155, 316, 1445, 1492
AhdI GACNNNNNGTC 1 cut(s) 901
AhlI ACTAGT 1 cut(s) 1286
AjnI CCWGG 1 cut(s) 1216
Alw21I GWGCWC 3 cut(s) 264, 773, 870
Alw26I GTCTC 5 cut(s) 182, 231, 692, 888, 1132
AlwI GGATC 5 cut(s) 89, 349, 792, 986, 1215
AlwNI CAGNNNCTG 1 cut(s) 1435
Ama87I CYCGRG 3 cut(s) 651, 1056, 1410
AoxI GGCC 2 cut(s) 20, 1539
ApoI RAATTY 1 cut(s) 1314
Asp700I GAANNNNTTC 1 cut(s) 930
Asp718I GGTACC 1 cut(s) 506
AspLEI GCGC 3 cut(s) 241, 547, 1154
AspS9I GGNCC 1 cut(s) 525
AsuC2I CCSGG 5 cut(s) 19, 273, 652, 653, 1143
AsuHPI GGTGA 4 cut(s) 96, 1122, 1202, 1581
AvaI CYCGRG 3 cut(s) 651, 1056, 1410
AvaII GGWCC 1 cut(s) 525
BalI TGGCCA 1 cut(s) 1541
BanI GGYRCC 1 cut(s) 506
BanII GRGCYC 2 cut(s) 773, 870
BarI GAAGNNNNNNTAC 2 cut(s) 415, 447
BbsI GAAGAC 1 cut(s) 663
Bbv12I GWGCWC 3 cut(s) 264, 773, 870
BbvCI CCTCAGC 2 cut(s) 12, 193
BccI CCATC 3 cut(s) 975, 1339, 1391
BceAI ACGGC 1 cut(s) 7
BciT130I CCWGG 1 cut(s) 1218
BclI TGATCA 2 cut(s) 775, 883
BcnI CCSGG 5 cut(s) 19, 273, 652, 653, 1143
BcoDI GTCTC 5 cut(s) 182, 231, 692, 888, 1132
BcuI ACTAGT 1 cut(s) 1286
BfaI CTAG 3 cut(s) 914, 1287, 1565
BfmI CTRYAG 4 cut(s) 70, 406, 1164, 1511
BmcAI AGTACT 1 cut(s) 1183
Bme1390I CCNGG 6 cut(s) 19, 273, 652, 653, 1143, 1218
Bme18I GGWCC 1 cut(s) 525
BmeRI GACNNNNNGTC 1 cut(s) 901
BmeT110I CYCGRG 3 cut(s) 651, 1056, 1410
BmgT120I GGNCC 1 cut(s) 525
BmiI GGNNCC 2 cut(s) 327, 508
BmrFI CCNGG 6 cut(s) 19, 273, 652, 653, 1143, 1218
BmsI GCATC 4 cut(s) 996, 1227, 1327, 1554
BpiI GAAGAC 1 cut(s) 663
Bpu10I CCTNAGC 4 cut(s) 12, 180, 193, 1031
BpuEI CTTGAG 4 cut(s) 96, 628, 1450, 1685
BpuMI CCSGG 5 cut(s) 19, 273, 652, 653, 1143
BsaAI YACGTR 1 cut(s) 1388
BsaBI GATNNNNATC 1 cut(s) 1330
BsaHI GRCGYC 1 cut(s) 902
BsaI GGTCTC 2 cut(s) 182, 692
BsaJI CCNNGG 9 cut(s) 17, 271, 501, 639, 651, 1010, 1141, 1216, 1480
BsaWI WCCGGW 1 cut(s) 419
Bsc4I CCNNNNNNNGG 3 cut(s) 113, 516, 737
Bse118I RCCGGY 1 cut(s) 1132
Bse1I ACTGG 1 cut(s) 1542
Bse3DI GCAATG 2 cut(s) 174, 527
Bse8I GATNNNNATC 1 cut(s) 1330
BseBI CCWGG 1 cut(s) 1218
BseDI CCNNGG 9 cut(s) 17, 271, 501, 639, 651, 1010, 1141, 1216, 1480
BseGI GGATG 1 cut(s) 986
BseJI GATNNNNATC 1 cut(s) 1330
BseLI CCNNNNNNNGG 3 cut(s) 113, 516, 737
BseMI GCAATG 2 cut(s) 174, 527
BseMII CTCAG 6 cut(s) 26, 189, 207, 242, 599, 1169
BseNI ACTGG 1 cut(s) 1542
BseRI GAGGAG 1 cut(s) 844
BseX3I CGGCCG 1 cut(s) 20
BseYI CCCAGC 1 cut(s) 87
Bsh1236I CGCG 1 cut(s) 503
Bsh1285I CGRYCG 2 cut(s) 23, 1453
BshFI GGCC 2 cut(s) 22, 1541
BshNI GGYRCC 1 cut(s) 506
BsiEI CGRYCG 2 cut(s) 23, 1453
BsiHKAI GWGCWC 3 cut(s) 264, 773, 870
BsiHKCI CYCGRG 3 cut(s) 651, 1056, 1410
BsiSI CCGG 8 cut(s) 19, 273, 347, 420, 652, 1133, 1143, 1521
BslFI GGGAC 1 cut(s) 298
BslI CCNNNNNNNGG 3 cut(s) 113, 516, 737
BsmAI GTCTC 5 cut(s) 182, 231, 692, 888, 1132
BsmBI CGTCTC 1 cut(s) 231
BsmFI GGGAC 1 cut(s) 298
BsmI GAATGC 1 cut(s) 487
BsnI GGCC 2 cut(s) 22, 1541
Bso31I GGTCTC 2 cut(s) 182, 692
BsoBI CYCGRG 3 cut(s) 651, 1056, 1410
Bsp1286I GDGCHC 3 cut(s) 264, 773, 870
BspACI CCGC 9 cut(s) 108, 233, 236, 501, 503, 636, 1299, 1302, 1449
BspANI GGCC 2 cut(s) 22, 1541
BspCNI CTCAG 6 cut(s) 25, 190, 206, 241, 598, 1168
BspFNI CGCG 1 cut(s) 503
BspLI GGNNCC 2 cut(s) 327, 508
BspMAI CTGCAG 1 cut(s) 1515
BspPI GGATC 5 cut(s) 89, 349, 792, 986, 1215
BspT107I GGYRCC 1 cut(s) 506
BspTNI GGTCTC 2 cut(s) 182, 692
BsrBI CCGCTC 1 cut(s) 110
BsrDI GCAATG 2 cut(s) 174, 527
BsrFI RCCGGY 1 cut(s) 1132
BsrI ACTGG 1 cut(s) 1542
BssAI RCCGGY 1 cut(s) 1132
BssECI CCNNGG 9 cut(s) 17, 271, 501, 639, 651, 1010, 1141, 1216, 1480
BssNI GRCGYC 1 cut(s) 902
BssT1I CCWWGG 3 cut(s) 639, 1010, 1480
Bst2UI CCWGG 1 cut(s) 1218
Bst4CI ACNGT 7 cut(s) 74, 225, 293, 407, 511, 881, 1195
Bst6I CTCTTC 3 cut(s) 180, 535, 672
BstACI GRCGYC 1 cut(s) 902
BstBAI YACGTR 1 cut(s) 1388
BstC8I GCNNGC 5 cut(s) 543, 1232, 1543, 1575, 1666
BstDEI CTNAG 8 cut(s) 12, 180, 193, 198, 228, 585, 1031, 1155
BstDSI CCRYGG 1 cut(s) 501
BstF5I GGATG 1 cut(s) 986
BstFNI CGCG 1 cut(s) 503
BstHHI GCGC 3 cut(s) 241, 547, 1154
BstMAI GTCTC 5 cut(s) 182, 231, 692, 888, 1132
BstMCI CGRYCG 2 cut(s) 23, 1453
BstMWI GCNNNNNNNGC 6 cut(s) 13, 544, 1097, 1301, 1561, 1570
BstNI CCWGG 1 cut(s) 1218
BstNSI RCATGY 1 cut(s) 1710
BstSCI CCNGG 6 cut(s) 17, 271, 650, 651, 1141, 1216
BstSFI CTRYAG 4 cut(s) 70, 406, 1164, 1511
BstUI CGCG 1 cut(s) 503
BstV2I GAAGAC 1 cut(s) 663
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
BstZI CGGCCG 1 cut(s) 20
BsuRI GGCC 2 cut(s) 22, 1541
BtgI CCRYGG 1 cut(s) 501
BtgZI GCGATG 1 cut(s) 551
BtsCI GGATG 1 cut(s) 986
BtsI GCAGTG 2 cut(s) 1209, 1675
BtsIMutI CAGTG 6 cut(s) 210, 886, 1209, 1392, 1535, 1675
Cac8I GCNNGC 5 cut(s) 543, 1232, 1543, 1575, 1666
CaiI CAGNNNCTG 1 cut(s) 1435
CfoI GCGC 3 cut(s) 241, 547, 1154
Cfr10I RCCGGY 1 cut(s) 1132
Cfr13I GGNCC 1 cut(s) 525
Cfr42I CCGCGG 1 cut(s) 504
Cfr9I CCCGGG 1 cut(s) 651
CseI GACGC 2 cut(s) 58, 891
Csp6I GTAC 7 cut(s) 375, 507, 648, 961, 1182, 1307, 1389
CspCI CAANNNNNGTGG 2 cut(s) 1308, 1343
CviAII CATG 6 cut(s) 53, 171, 616, 972, 1063, 1707
CviQI GTAC 7 cut(s) 375, 507, 648, 961, 1182, 1307, 1389
DdeI CTNAG 8 cut(s) 12, 180, 193, 198, 228, 585, 1031, 1155
DraI TTTAAA 1 cut(s) 355
DriI GACNNNNNGTC 1 cut(s) 901
EaeI YGGCCR 2 cut(s) 20, 1539
EagI CGGCCG 1 cut(s) 20
Eam1104I CTCTTC 3 cut(s) 180, 535, 672
Eam1105I GACNNNNNGTC 1 cut(s) 901
EarI CTCTTC 3 cut(s) 180, 535, 672
EciI GGCGGA 1 cut(s) 625
Ecl136II GAGCTC 2 cut(s) 771, 868
EclXI CGGCCG 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 639, 1010, 1480
Eco24I GRGCYC 2 cut(s) 773, 870
Eco31I GGTCTC 2 cut(s) 182, 692
Eco32I GATATC 2 cut(s) 204, 1383
Eco47I GGWCC 1 cut(s) 525
Eco52I CGGCCG 1 cut(s) 20
Eco53kI GAGCTC 2 cut(s) 771, 868
Eco57I CTGAAG 1 cut(s) 562
Eco88I CYCGRG 3 cut(s) 651, 1056, 1410
EcoICRI GAGCTC 2 cut(s) 771, 868
EcoRII CCWGG 1 cut(s) 1216
EcoRV GATATC 2 cut(s) 204, 1383
EcoT14I CCWWGG 3 cut(s) 639, 1010, 1480
EcoT22I ATGCAT 1 cut(s) 176
EcoT38I GRGCYC 2 cut(s) 773, 870
ErhI CCWWGG 3 cut(s) 639, 1010, 1480
Esp3I CGTCTC 1 cut(s) 231
FaeI CATG 6 cut(s) 56, 174, 619, 975, 1066, 1710
FalI AAGNNNNNCTT 2 cut(s) 648, 680
FaqI GGGAC 1 cut(s) 298
FatI CATG 6 cut(s) 52, 170, 615, 971, 1062, 1706
FauI CCCGC 3 cut(s) 115, 496, 508
FbaI TGATCA 2 cut(s) 775, 883
FokI GGATG 1 cut(s) 993
FriOI GRGCYC 2 cut(s) 773, 870
FspBI CTAG 3 cut(s) 914, 1287, 1565
FspI TGCGCA 1 cut(s) 546
GlaI GCGC 3 cut(s) 240, 546, 1153
GsaI CCCAGC 1 cut(s) 91
HaeIII GGCC 2 cut(s) 22, 1541
HapII CCGG 8 cut(s) 19, 273, 347, 420, 652, 1133, 1143, 1521
HgaI GACGC 2 cut(s) 58, 891
HhaI GCGC 3 cut(s) 241, 547, 1154
Hin1I GRCGYC 1 cut(s) 902
Hin1II CATG 6 cut(s) 56, 174, 619, 975, 1066, 1710
Hin6I GCGC 3 cut(s) 239, 545, 1152
HinP1I GCGC 3 cut(s) 239, 545, 1152
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 6 cut(s) 446, 849, 985, 1169, 1624, 1676
HpaII CCGG 8 cut(s) 19, 273, 347, 420, 652, 1133, 1143, 1521
HphI GGTGA 4 cut(s) 96, 1122, 1202, 1581
Hpy166II GTNNAC 2 cut(s) 391, 955
Hpy188I TCNGA 9 cut(s) 330, 535, 775, 780, 1158, 1174, 1336, 1377, 1681
Hpy188III TCNNGA 8 cut(s) 674, 989, 1056, 1282, 1353, 1412, 1656, 1702
Hpy8I GTNNAC 2 cut(s) 391, 955
Hpy99I CGWCG 2 cut(s) 52, 907
HpyAV CCTTC 5 cut(s) 29, 469, 775, 819, 1439
HpyCH4III ACNGT 7 cut(s) 74, 225, 293, 407, 511, 881, 1195
HpyCH4IV ACGT 3 cut(s) 387, 1103, 1387
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 544, 1097, 1301, 1561, 1570
HpyF3I CTNAG 8 cut(s) 12, 180, 193, 198, 228, 585, 1031, 1155
HpySE526I ACGT 3 cut(s) 387, 1103, 1387
Hsp92I GRCGYC 1 cut(s) 902
Hsp92II CATG 6 cut(s) 56, 174, 619, 975, 1066, 1710
HspAI GCGC 3 cut(s) 239, 545, 1152
KpnI GGTACC 1 cut(s) 510
Ksp22I TGATCA 2 cut(s) 775, 883
KspI CCGCGG 1 cut(s) 504
LmnI GCTCC 6 cut(s) 4, 259, 535, 831, 1084, 1432
LweI GCATC 4 cut(s) 996, 1227, 1327, 1554
MaeI CTAG 3 cut(s) 914, 1287, 1565
MaeII ACGT 3 cut(s) 387, 1103, 1387
MaeIII GTNAC 3 cut(s) 63, 1040, 1533
MbiI CCGCTC 1 cut(s) 110
MfeI CAATTG 1 cut(s) 1440
MflI RGATCY 1 cut(s) 94
MhlI GDGCHC 3 cut(s) 264, 773, 870
MlsI TGGCCA 1 cut(s) 1541
MluCI AATT 5 cut(s) 1001, 1314, 1440, 1455, 1659
MluNI TGGCCA 1 cut(s) 1541
MmeI TCCRAC 2 cut(s) 582, 1197
Mox20I TGGCCA 1 cut(s) 1541
Mph1103I ATGCAT 1 cut(s) 176
MroXI GAANNNNTTC 1 cut(s) 930
MscI TGGCCA 1 cut(s) 1541
MseI TTAA 4 cut(s) 354, 765, 1458, 1611
MslI CAYNNNNRTG 2 cut(s) 620, 1550
Msp20I TGGCCA 1 cut(s) 1541
MspA1I CMGCKG 4 cut(s) 83, 197, 503, 573
MspI CCGG 8 cut(s) 19, 273, 347, 420, 652, 1133, 1143, 1521
MspR9I CCNGG 6 cut(s) 19, 273, 652, 653, 1143, 1218
MunI CAATTG 1 cut(s) 1440
Mva1269I GAATGC 1 cut(s) 487
MvaI CCWGG 1 cut(s) 1218
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 6 cut(s) 13, 544, 1097, 1301, 1561, 1570
NciI CCSGG 5 cut(s) 19, 273, 652, 653, 1143
NlaIII CATG 6 cut(s) 56, 174, 619, 975, 1066, 1710
NlaIV GGNNCC 2 cut(s) 327, 508
NmuCI GTSAC 2 cut(s) 63, 1533
NsbI TGCGCA 1 cut(s) 546
NsiI ATGCAT 1 cut(s) 176
NspI RCATGY 1 cut(s) 1710
PaeR7I CTCGAG 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 1 cut(s) 666
PctI GAATGC 1 cut(s) 487
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 6 cut(s) 446, 849, 985, 1169, 1624, 1676
Ppu21I YACGTR 1 cut(s) 1388
Psp124BI GAGCTC 2 cut(s) 773, 870
Psp1406I AACGTT 2 cut(s) 387, 1103
Psp6I CCWGG 1 cut(s) 1216
PspFI CCCAGC 1 cut(s) 87
PspGI CCWGG 1 cut(s) 1216
PspN4I GGNNCC 2 cut(s) 327, 508
PspPI GGNCC 1 cut(s) 525
PstI CTGCAG 1 cut(s) 1515
PstNI CAGNNNCTG 1 cut(s) 1435
PsuI RGATCY 1 cut(s) 94
PvuII CAGCTG 3 cut(s) 83, 197, 573
RsaI GTAC 7 cut(s) 376, 508, 649, 962, 1183, 1308, 1390
RsaNI GTAC 7 cut(s) 375, 507, 648, 961, 1182, 1307, 1389
RseI CAYNNNNRTG 2 cut(s) 620, 1550
SacI GAGCTC 2 cut(s) 773, 870
SacII CCGCGG 1 cut(s) 504
SaqAI TTAA 4 cut(s) 354, 765, 1458, 1611
Sau96I GGNCC 1 cut(s) 525
ScaI AGTACT 1 cut(s) 1183
ScrFI CCNGG 6 cut(s) 19, 273, 652, 653, 1143, 1218
SduI GDGCHC 3 cut(s) 264, 773, 870
SfaNI GCATC 4 cut(s) 996, 1227, 1327, 1554
SfcI CTRYAG 4 cut(s) 70, 406, 1164, 1511
Sfr274I CTCGAG 1 cut(s) 1056
Sfr303I CCGCGG 1 cut(s) 504
SgrBI CCGCGG 1 cut(s) 504
SinI GGWCC 1 cut(s) 525
SlaI CTCGAG 1 cut(s) 1056
SmaI CCCGGG 1 cut(s) 653
SmiMI CAYNNNNRTG 2 cut(s) 620, 1550
SmlI CTYRAG 5 cut(s) 111, 607, 1056, 1465, 1700
SmoI CTYRAG 5 cut(s) 111, 607, 1056, 1465, 1700
SpeI ACTAGT 1 cut(s) 1286
Sse9I AATT 5 cut(s) 1001, 1314, 1440, 1455, 1659
SsiI CCGC 9 cut(s) 108, 233, 236, 501, 503, 636, 1299, 1302, 1449
SspMI CTAG 3 cut(s) 914, 1287, 1565
SstI GAGCTC 2 cut(s) 773, 870
StyD4I CCNGG 6 cut(s) 17, 271, 650, 651, 1141, 1216
StyI CCWWGG 3 cut(s) 639, 1010, 1480
TaaI ACNGT 7 cut(s) 74, 225, 293, 407, 511, 881, 1195
TaiI ACGT 3 cut(s) 390, 1106, 1390
TaqI TCGA 7 cut(s) 47, 401, 924, 1057, 1354, 1453, 1560
TasI AATT 5 cut(s) 1001, 1314, 1440, 1455, 1659
TatI WGTACW 1 cut(s) 1181
TauI GCSGC 4 cut(s) 236, 239, 1301, 1304
TfiI GAWTC 6 cut(s) 446, 849, 985, 1169, 1624, 1676
Tru1I TTAA 4 cut(s) 354, 765, 1458, 1611
Tru9I TTAA 4 cut(s) 354, 765, 1458, 1611
TscAI CASTG 6 cut(s) 217, 886, 1209, 1399, 1542, 1675
TseFI GTSAC 2 cut(s) 63, 1533
Tsp45I GTSAC 2 cut(s) 63, 1533
TspDTI ATGAA 4 cut(s) 604, 641, 960, 1079
TspGWI ACGGA 2 cut(s) 47, 1540
TspMI CCCGGG 1 cut(s) 651
TspRI CASTG 6 cut(s) 217, 886, 1209, 1399, 1542, 1675
VpaK11BI GGWCC 1 cut(s) 525
XapI RAATTY 1 cut(s) 1314
XceI RCATGY 1 cut(s) 1710
XhoI CTCGAG 1 cut(s) 1056
XmaI CCCGGG 1 cut(s) 651
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 3 cut(s) 914, 1287, 1565
ZrmI AGTACT 1 cut(s) 1183
Zsp2I ATGCAT 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.