Rh7AG061000

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0004415
Physical Location & Seq
Reverse (-)
4267561 .. 4271706
4146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG061000.1

Sequence Viewer

Length: 1719 bp
ATGGAGCTGCCACAGCCCCGTCCGTTTGGAGGCGAAGGAGGAAGAAAACCAACGCATGACTTTCTGTCGTTGTACACTAGTCATTCAACTGCCCAACAAGATCCAATACCACCTTCTCAAGGAGGTTATCTTGAAACTCATGATTTTCTACAACCACTTGAACGAATGGGAATGGGAAAGACCTGTGCCAAAGAAGAAACCTCGGTTGAGATCATATCACCAAGTAGAAGTAGTGTTGAAAAGCCGCCATGTGTGGCGCAACGGCCAACTTCTGTGGAGCACATTCTTCCCGGTGGGATTGGGACTTACAGTATAAGCCACATTTCGTATTTTAATCAAAGGGTTCCAAAACCAGAGGAAAACGTATTCCCGGTTGCTCCTCAAGCAAGTAGTACCCATGAAAGGAATGATGAAACCTCAAACTGCAGTTCTTATGCCGGAAGTGGTTTCACTTTGTGGGACGAATCTGCAGCAATGAAGGGAAAGACAGGGAAGGAGAATGTGGTGGAAAGACCAGGTTTAAGAGGGCAATGGACGTCGTCAGAGAGGCCATCACAGTCATCTTCCACTAACAACCGCAACTGCTTCAGCTCTCAGTCATCTGGGCAGAAGAACCTGAGCTTCATGGAGATGATGAAGTCCGCTGCCAAGGGTTGCACCCAGGAAGAAGAACTTGACGATGAGGAAGAGTTCGCTCTGAAAAAGGAGATGTCCACTTCTACTACCACTGCCACTACCCCCTACAACGGAGAATTACGGGTTAAGGTTGATGTTAAGAGCTCTGATCAGAAAGCTAACACGCCACGATCCAAACATTCTGCCACTGAACAACGAAGGAGGAGTAAAATAAATGACAGATTCCAAATGTTGAGAGAGCTCATTCCTCATAGTGATCAAAAGAGGGACAAGGCATCATTTCTATTAGAGGTTATCGAATACATTCAGTATTTACAGGAAAAAGTAACCAAGTATGAGGCTCCATACCAAGGTTGGAACCATGATCCAGCAAAATTGATGCCTTGGGGAAACAACAAGCTTGGGGAAAGTTACTGTGATCAATCTCGAAGTATGAATGGTGGATCTGGTCCTGCATTAGTGTTTGCTGCCTCAAAATTTGAGGAGAAAACTACTTCAGTGTCTCCTACTATTCCTGGAAGTGCTCAGAACCTGGTAGAATCTGATACGAGTACTGAAACTACATTCAGAGCTAAGGATTACCCCAATGGAATAACAAACAAGGCAAATCCCTTTCCTCTGTCAATGCAGTCGAACTTCTCGACACCTGTCAGAAGTGGTAGTGCAGCACCTCATCTTCCACCTAGATTGCCATCTGATGCAGAGAACACATCATCTCATCCTCGCTCCATGTTATTCCCGACAAAATCATGTACTGCTGATGCTGGTGCCATTAGTGATAAGCTAAAAGAACATGAACTTACAATTGAAGGTGGAAGAATTAACATCTCTAGTGCGTACTCTCAAGGGTTATTAAATACTCTTACACAAGCCCTGCAGAATTCTGGTGTGGATTTGTCACAGGCCAGCATCTCGGTGCAAATCGAGCTTGGGAAGCAAGCGTGTAGTAGAACGGCTATACCCAAATCCATTGTCAAGGAAAATGAGATTCCCTCTATGACTCCAGGGAAAAAGCACACTAGAATTTCAGTTGGTGAAGACTCAGAACAAGCCCAAAAGAAGCTCAGGACAGGCAGACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

572

Amino Acids

62.84

Weight (kDa)

7.23

Isoelectric Point (pI)

54.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 269 - 318 2.1e-16 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 539
AccB1I GGYRCC 1 cut(s) 1403
AciI CCGC 3 cut(s) 245, 577, 642
AclWI GGATC 4 cut(s) 95, 801, 995, 1087
AcoI YGGCCR 1 cut(s) 263
AcsI RAATTY 3 cut(s) 1112, 1516, 1659
AcuI CTGAAG 2 cut(s) 571, 1116
AcyI GRCGYC 1 cut(s) 536
AdeI CACNNNGTG 1 cut(s) 456
AfaI GTAC 5 cut(s) 74, 394, 1189, 1390, 1475
AfiI CCNNNNNNNGG 5 cut(s) 29, 119, 402, 746, 986
AgsI TTSAA 5 cut(s) 87, 134, 161, 239, 1445
AhdI GACNNNNNGTC 1 cut(s) 64
AhlI ACTAGT 1 cut(s) 77
AjnI CCWGG 5 cut(s) 514, 660, 1150, 1167, 1639
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
Alw21I GWGCWC 4 cut(s) 282, 782, 879, 1162
Alw26I GTCTC 1 cut(s) 1143
AlwI GGATC 4 cut(s) 95, 801, 995, 1087
AlwNI CAGNNNCTG 1 cut(s) 1168
AoxI GGCC 3 cut(s) 263, 548, 1539
ApeKI GCWGC 5 cut(s) 7, 470, 644, 1103, 1301
ApoI RAATTY 3 cut(s) 1112, 1516, 1659
ArsI GACNNNNNNTTYG 2 cut(s) 1593, 1625
Asp700I GAANNNNTTC 1 cut(s) 939
AspLEI GCGC 1 cut(s) 259
AspS9I GGNCC 1 cut(s) 1085
AsuC2I CCSGG 2 cut(s) 291, 371
AsuHPI GGTGA 2 cut(s) 210, 1682
AvaII GGWCC 1 cut(s) 1085
BanI GGYRCC 1 cut(s) 1403
BanII GRGCYC 2 cut(s) 782, 879
BbsI GAAGAC 1 cut(s) 1680
Bbv12I GWGCWC 4 cut(s) 282, 782, 879, 1162
BbvI GCAGC 4 cut(s) 482, 631, 1090, 1313
BccI CCATC 2 cut(s) 559, 1336
BceAI ACGGC 2 cut(s) 278, 1605
BciT130I CCWGG 5 cut(s) 516, 662, 1152, 1169, 1641
BclI TGATCA 3 cut(s) 784, 892, 1054
BcnI CCSGG 2 cut(s) 291, 371
BcoDI GTCTC 1 cut(s) 1143
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 4 cut(s) 78, 1320, 1467, 1656
BfmI CTRYAG 3 cut(s) 424, 468, 1511
BisI GCNGC 6 cut(s) 8, 245, 471, 645, 1104, 1302
BlsI GCNGC 6 cut(s) 9, 246, 472, 646, 1105, 1303
BmcAI AGTACT 1 cut(s) 1189
Bme1390I CCNGG 7 cut(s) 291, 371, 516, 662, 1152, 1169, 1641
Bme18I GGWCC 1 cut(s) 1085
BmeRI GACNNNNNGTC 1 cut(s) 64
BmgT120I GGNCC 1 cut(s) 1085
BmiI GGNNCC 4 cut(s) 345, 978, 995, 1405
BmrFI CCNGG 7 cut(s) 291, 371, 516, 662, 1152, 1169, 1641
BmsI GCATC 5 cut(s) 920, 1005, 1324, 1387, 1554
BoxI GACNNNNGTC 1 cut(s) 1283
BpiI GAAGAC 1 cut(s) 1680
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
BpmI CTGGAG 1 cut(s) 1623
Bpu10I CCTNAGC 3 cut(s) 617, 1209, 1700
BpuEI CTTGAG 3 cut(s) 102, 366, 1464
BpuMI CCSGG 2 cut(s) 291, 371
BsaBI GATNNNNATC 1 cut(s) 1327
BsaHI GRCGYC 1 cut(s) 536
BsaJI CCNNGG 6 cut(s) 201, 648, 660, 985, 1019, 1640
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 119, 402, 746, 986
Bse3DI GCAATG 2 cut(s) 480, 536
Bse8I GATNNNNATC 1 cut(s) 1327
BseBI CCWGG 5 cut(s) 516, 662, 1152, 1169, 1641
BseDI CCNNGG 6 cut(s) 201, 648, 660, 985, 1019, 1640
BseGI GGATG 1 cut(s) 1354
BseJI GATNNNNATC 1 cut(s) 1327
BseLI CCNNNNNNNGG 5 cut(s) 29, 119, 402, 746, 986
BseMI GCAATG 2 cut(s) 480, 536
BseMII CTCAG 5 cut(s) 608, 608, 1175, 1692, 1714
BseRI GAGGAG 3 cut(s) 369, 853, 1133
BseXI GCAGC 4 cut(s) 482, 631, 1090, 1313
BsgI GTGCAG 1 cut(s) 1320
BshFI GGCC 3 cut(s) 265, 550, 1541
BshNI GGYRCC 1 cut(s) 1403
BsiHKAI GWGCWC 4 cut(s) 282, 782, 879, 1162
BsiSI CCGG 3 cut(s) 291, 371, 438
BslFI GGGAC 3 cut(s) 316, 473, 917
BslI CCNNNNNNNGG 5 cut(s) 29, 119, 402, 746, 986
BsmAI GTCTC 1 cut(s) 1143
BsmFI GGGAC 3 cut(s) 316, 473, 917
BsnI GGCC 3 cut(s) 265, 550, 1541
Bsp1286I GDGCHC 4 cut(s) 282, 782, 879, 1162
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
BspACI CCGC 3 cut(s) 245, 577, 642
BspANI GGCC 3 cut(s) 265, 550, 1541
BspCNI CTCAG 5 cut(s) 607, 609, 1174, 1691, 1713
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 4 cut(s) 345, 978, 995, 1405
BspMAI CTGCAG 3 cut(s) 428, 472, 1515
BspPI GGATC 4 cut(s) 95, 801, 995, 1087
BspT107I GGYRCC 1 cut(s) 1403
BsrDI GCAATG 2 cut(s) 480, 536
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 6 cut(s) 201, 648, 660, 985, 1019, 1640
BssMI GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
BssNI GRCGYC 1 cut(s) 536
BssT1I CCWWGG 3 cut(s) 648, 985, 1019
Bst2UI CCWGG 5 cut(s) 516, 662, 1152, 1169, 1641
Bst4CI ACNGT 3 cut(s) 311, 558, 1052
Bst6I CTCTTC 1 cut(s) 681
BstACI GRCGYC 1 cut(s) 536
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 2 cut(s) 1543, 1575
BstDEI CTNAG 6 cut(s) 594, 617, 1161, 1209, 1678, 1700
BstENI CCTNNNNNAGG 1 cut(s) 117
BstF5I GGATG 1 cut(s) 1354
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 8 cut(s) 103, 213, 787, 809, 895, 1003, 1057, 1082
BstMAI GTCTC 1 cut(s) 1143
BstMBI GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
BstMWI GCNNNNNNNGC 4 cut(s) 13, 383, 1561, 1570
BstNI CCWGG 5 cut(s) 516, 662, 1152, 1169, 1641
BstPAI GACNNNNGTC 1 cut(s) 1283
BstSCI CCNGG 7 cut(s) 289, 369, 514, 660, 1150, 1167, 1639
BstSFI CTRYAG 3 cut(s) 424, 468, 1511
BstV1I GCAGC 4 cut(s) 482, 631, 1090, 1313
BstV2I GAAGAC 1 cut(s) 1680
BstX2I RGATCY 2 cut(s) 100, 1079
BstYI RGATCY 2 cut(s) 100, 1079
BsuRI GGCC 3 cut(s) 265, 550, 1541
BtsCI GGATG 1 cut(s) 1354
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 3 cut(s) 726, 822, 1140
Cac8I GCNNGC 2 cut(s) 1543, 1575
CaiI CAGNNNCTG 1 cut(s) 1168
CciI TCATGA 1 cut(s) 139
CfoI GCGC 1 cut(s) 259
Cfr13I GGNCC 1 cut(s) 1085
CsiI ACCWGGT 2 cut(s) 514, 1167
Csp6I GTAC 5 cut(s) 73, 393, 1188, 1389, 1474
CspCI CAANNNNNGTGG 4 cut(s) 255, 290, 1305, 1340
CviAII CATG 9 cut(s) 56, 140, 249, 398, 625, 998, 1366, 1386, 1430
CviQI GTAC 5 cut(s) 73, 393, 1188, 1389, 1474
DdeI CTNAG 6 cut(s) 594, 617, 1161, 1209, 1678, 1700
DpnI GATC 8 cut(s) 102, 212, 786, 808, 894, 1002, 1056, 1081
DpnII GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
DraIII CACNNNGTG 1 cut(s) 456
DriI GACNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 1 cut(s) 263
Eam1104I CTCTTC 1 cut(s) 681
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 681
Ecl136II GAGCTC 2 cut(s) 780, 877
Eco130I CCWWGG 3 cut(s) 648, 985, 1019
Eco24I GRGCYC 2 cut(s) 782, 879
Eco47I GGWCC 1 cut(s) 1085
Eco53kI GAGCTC 2 cut(s) 780, 877
Eco57I CTGAAG 2 cut(s) 571, 1116
EcoICRI GAGCTC 2 cut(s) 780, 877
EcoNI CCTNNNNNAGG 1 cut(s) 117
EcoRI GAATTC 1 cut(s) 1516
EcoRII CCWGG 5 cut(s) 514, 660, 1150, 1167, 1639
EcoT14I CCWWGG 3 cut(s) 648, 985, 1019
EcoT38I GRGCYC 2 cut(s) 782, 879
ErhI CCWWGG 3 cut(s) 648, 985, 1019
FaeI CATG 9 cut(s) 59, 143, 252, 401, 628, 1001, 1369, 1389, 1433
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FaqI GGGAC 3 cut(s) 316, 473, 917
FatI CATG 9 cut(s) 55, 139, 248, 397, 624, 997, 1365, 1385, 1429
FbaI TGATCA 3 cut(s) 784, 892, 1054
Fnu4HI GCNGC 6 cut(s) 8, 245, 471, 645, 1104, 1302
FokI GGATG 1 cut(s) 1341
FriOI GRGCYC 2 cut(s) 782, 879
Fsp4HI GCNGC 6 cut(s) 8, 245, 471, 645, 1104, 1302
FspBI CTAG 4 cut(s) 78, 1320, 1467, 1656
GlaI GCGC 1 cut(s) 258
GluI GCNGC 6 cut(s) 8, 245, 471, 645, 1104, 1302
GsuI CTGGAG 1 cut(s) 1623
HaeIII GGCC 3 cut(s) 265, 550, 1541
HapII CCGG 3 cut(s) 291, 371, 438
HhaI GCGC 1 cut(s) 259
Hin1I GRCGYC 1 cut(s) 536
Hin1II CATG 9 cut(s) 59, 143, 252, 401, 628, 1001, 1369, 1389, 1433
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HindIII AAGCTT 1 cut(s) 1034
HinfI GANTC 6 cut(s) 464, 858, 1175, 1624, 1636, 1676
HpaII CCGG 3 cut(s) 291, 371, 438
HphI GGTGA 2 cut(s) 210, 1682
Hpy166II GTNNAC 2 cut(s) 75, 714
Hpy188III TCNNGA 6 cut(s) 131, 140, 1062, 1276, 1375, 1702
Hpy8I GTNNAC 2 cut(s) 75, 714
Hpy99I CGWCG 1 cut(s) 541
HpyAV CCTTC 6 cut(s) 29, 123, 472, 487, 828, 1439
HpyCH4III ACNGT 3 cut(s) 311, 558, 1052
HpyCH4IV ACGT 2 cut(s) 363, 536
HpyCH4V TGCA 9 cut(s) 426, 470, 657, 1091, 1264, 1301, 1337, 1513, 1555
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 383, 1561, 1570
HpyF3I CTNAG 6 cut(s) 594, 617, 1161, 1209, 1678, 1700
HpySE526I ACGT 2 cut(s) 363, 536
Hsp92I GRCGYC 1 cut(s) 536
Hsp92II CATG 9 cut(s) 59, 143, 252, 401, 628, 1001, 1369, 1389, 1433
HspAI GCGC 1 cut(s) 257
Ksp22I TGATCA 3 cut(s) 784, 892, 1054
Kzo9I GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
LmnI GCTCC 5 cut(s) 4, 277, 382, 982, 1367
Lsp1109I GCAGC 4 cut(s) 482, 631, 1090, 1313
LweI GCATC 5 cut(s) 920, 1005, 1324, 1387, 1554
MabI ACCWGGT 2 cut(s) 514, 1167
MaeI CTAG 4 cut(s) 78, 1320, 1467, 1656
MaeII ACGT 2 cut(s) 363, 536
MaeIII GTNAC 3 cut(s) 961, 1046, 1533
MalI GATC 8 cut(s) 102, 212, 786, 808, 894, 1002, 1056, 1081
MboI GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
MfeI CAATTG 1 cut(s) 1440
MflI RGATCY 2 cut(s) 100, 1079
MhlI GDGCHC 4 cut(s) 282, 782, 879, 1162
MluCI AATT 7 cut(s) 752, 1010, 1112, 1440, 1455, 1516, 1659
MlyI GAGTC 2 cut(s) 1630, 1670
MmeI TCCRAC 1 cut(s) 971
MroXI GAANNNNTTC 1 cut(s) 939
MseI TTAA 6 cut(s) 333, 521, 762, 774, 1458, 1490
MslI CAYNNNNRTG 2 cut(s) 629, 1550
MspA1I CMGCKG 1 cut(s) 644
MspI CCGG 3 cut(s) 291, 371, 438
MspR9I CCNGG 7 cut(s) 291, 371, 516, 662, 1152, 1169, 1641
MunI CAATTG 1 cut(s) 1440
MvaI CCWGG 5 cut(s) 516, 662, 1152, 1169, 1641
MwoI GCNNNNNNNGC 4 cut(s) 13, 383, 1561, 1570
NciI CCSGG 2 cut(s) 291, 371
NdeII GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
NlaIII CATG 9 cut(s) 59, 143, 252, 401, 628, 1001, 1369, 1389, 1433
NlaIV GGNNCC 4 cut(s) 345, 978, 995, 1405
NmuCI GTSAC 1 cut(s) 1533
PagI TCATGA 1 cut(s) 139
PcsI WCGNNNNNNNCGW 1 cut(s) 1274
PdmI GAANNNNTTC 1 cut(s) 939
PfeI GAWTC 4 cut(s) 464, 858, 1175, 1624
PflFI GACNNNGTC 1 cut(s) 538
PfoI TCCNGGA 1 cut(s) 1150
PkrI GCNGC 6 cut(s) 9, 246, 472, 646, 1105, 1303
PleI GAGTC 2 cut(s) 1630, 1670
PpsI GAGTC 2 cut(s) 1630, 1670
PshAI GACNNNNGTC 1 cut(s) 1283
Psp124BI GAGCTC 2 cut(s) 782, 879
Psp6I CCWGG 5 cut(s) 514, 660, 1150, 1167, 1639
PspGI CCWGG 5 cut(s) 514, 660, 1150, 1167, 1639
PspN4I GGNNCC 4 cut(s) 345, 978, 995, 1405
PspPI GGNCC 1 cut(s) 1085
PstI CTGCAG 3 cut(s) 428, 472, 1515
PstNI CAGNNNCTG 1 cut(s) 1168
PsuI RGATCY 2 cut(s) 100, 1079
PsyI GACNNNGTC 1 cut(s) 538
RsaI GTAC 5 cut(s) 74, 394, 1189, 1390, 1475
RsaNI GTAC 5 cut(s) 73, 393, 1188, 1389, 1474
RseI CAYNNNNRTG 2 cut(s) 629, 1550
SacI GAGCTC 2 cut(s) 782, 879
SaqAI TTAA 6 cut(s) 333, 521, 762, 774, 1458, 1490
SatI GCNGC 6 cut(s) 8, 245, 471, 645, 1104, 1302
Sau3AI GATC 8 cut(s) 100, 210, 784, 806, 892, 1000, 1054, 1079
Sau96I GGNCC 1 cut(s) 1085
ScaI AGTACT 1 cut(s) 1189
SchI GAGTC 2 cut(s) 1630, 1670
ScrFI CCNGG 7 cut(s) 291, 371, 516, 662, 1152, 1169, 1641
SduI GDGCHC 4 cut(s) 282, 782, 879, 1162
SexAI ACCWGGT 2 cut(s) 514, 1167
SfaNI GCATC 5 cut(s) 920, 1005, 1324, 1387, 1554
SfcI CTRYAG 3 cut(s) 424, 468, 1511
SinI GGWCC 1 cut(s) 1085
SmiMI CAYNNNNRTG 2 cut(s) 629, 1550
SmlI CTYRAG 3 cut(s) 117, 381, 1479
SmoI CTYRAG 3 cut(s) 117, 381, 1479
SpeI ACTAGT 1 cut(s) 77
Sse9I AATT 7 cut(s) 752, 1010, 1112, 1440, 1455, 1516, 1659
SsiI CCGC 3 cut(s) 245, 577, 642
SspMI CTAG 4 cut(s) 78, 1320, 1467, 1656
SstI GAGCTC 2 cut(s) 782, 879
StyD4I CCNGG 7 cut(s) 289, 369, 514, 660, 1150, 1167, 1639
StyI CCWWGG 3 cut(s) 648, 985, 1019
TaaI ACNGT 3 cut(s) 311, 558, 1052
TaiI ACGT 2 cut(s) 366, 539
TaqI TCGA 5 cut(s) 933, 1063, 1268, 1277, 1560
TasI AATT 7 cut(s) 752, 1010, 1112, 1440, 1455, 1516, 1659
TatI WGTACW 3 cut(s) 72, 1187, 1388
TauI GCSGC 1 cut(s) 247
TfiI GAWTC 4 cut(s) 464, 858, 1175, 1624
Tru1I TTAA 6 cut(s) 333, 521, 762, 774, 1458, 1490
Tru9I TTAA 6 cut(s) 333, 521, 762, 774, 1458, 1490
TscAI CASTG 3 cut(s) 733, 829, 1140
TseFI GTSAC 1 cut(s) 1533
TseI GCWGC 5 cut(s) 7, 470, 644, 1103, 1301
Tsp45I GTSAC 1 cut(s) 1533
TspDTI ATGAA 7 cut(s) 414, 426, 491, 613, 650, 1085, 1446
TspGWI ACGGA 2 cut(s) 12, 762
TspRI CASTG 3 cut(s) 733, 829, 1140
Tth111I GACNNNGTC 1 cut(s) 538
VpaK11BI GGWCC 1 cut(s) 1085
XagI CCTNNNNNAGG 1 cut(s) 117
XapI RAATTY 3 cut(s) 1112, 1516, 1659
XcmI CCANNNNNNNNNTGG 1 cut(s) 987
XmnI GAANNNNTTC 1 cut(s) 939
XspI CTAG 4 cut(s) 78, 1320, 1467, 1656
ZraI GACGTC 1 cut(s) 537
ZrmI AGTACT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.